CmaCh16G005960 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G005960
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionMucin-2
LocationCma_Chr16: 3078936 .. 3080099 (-)
RNA-Seq ExpressionCmaCh16G005960
SyntenyCmaCh16G005960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATTTTCCTCATTGGTTCTGTTTTGGAATTTCATCATCTCTCGTGTATCCTCAGCTATGATTCTTTCATGAAACCGATCGGCAATTCTCTGGTTTTGAGCAACGATATCGATGAGACGCCGAATGGATGGTGATGATGATGCTGATTTGAGGCCTGGTAACAACACTTTCCAAACCATTGCTGCGGCTGCCGATTTTATCGCCACCGTCGATCATCGTTTTCCTCGGGCTACTGATGTCCAGGTATTGTAATGTTCACATCAGTTCACCGTCCATTTAATCATTTGGAGTTTTGGATTTTAGTGTTGGTTTATTTATGGATTGAGAATACTGGCTATGTTTTTGGAAATTACTGTTCATTCTTAACTCCGTTAGGTATTAGGATGTAGTTCTTTGTCGAGGGATGATATTATGGCGGAATGGAATCTGTAATGTTTGTCGTGGATTGCGGAATTCTAAATTAGGGTTTTAATTTCCCCTTTTTTCCTGCTCCTTGCTGTTTGTTTGCTTAGGGACTGCTAATCGTTACATGAATACACGGAATCACGAGCTGGCTTCGTTTCTGATTTTCTGCTTTTTCTGCTTTTGGCTTTCTCCTCGCATGATTATTAGATACTTAGGGTTTGGAAGGTACCAAGATTTGTGCATTGGGTTGGACGACTGTGTCAGGAAGCAATGCGCTGTTCTAGCCCAATGTTGTTTGTCTTCTTGTAATAACGCTGCTCTTTTTAACCAGAAAGGCATCTCTCCATTCTTTAAATTAATGTCATTCTCTATAGAGGAAGAGTATTGCTTTTTATATAAAGATTCCAACAAATAGGGCTCTCATTTGTCCAAGCTCTTTCTACTGTTCTGTACTGATGTCATTATCACTTTCCTCGTTTTCTCTTTGTTTGCTTGCCCTCAGAAAAGAAGATGGGGTAGCTGTTGGAGTATTTATTGGTGCTTTGGATCTCTCAAACAGGGAAAAGAGTTGTTGTGCACGCTGTGTGTTGGTACCAGAACCTAGTCCTCCTTCAGCTGGGGCTCATGAAGAAGATTCATTGCACTCACCCGATATTGAGCTTCCACTTGCTGCACCCCTCCCTCTTCCCCTGTATCCTTCCTTCAATCTGAGCCACCTTCTGCTACTCATTCACCTACAGCAACATGTGTTCTCCTGA

mRNA sequence

CAAATTTTCCTCATTGGTTCTGTTTTGGAATTTCATCATCTCTCGTGTATCCTCAGCTATGATTCTTTCATGAAACCGATCGGCAATTCTCTGGTTTTGAGCAACGATATCGATGAGACGCCGAATGGATGGTGATGATGATGCTGATTTGAGGCCTGGTAACAACACTTTCCAAACCATTGCTGCGGCTGCCGATTTTATCGCCACCGTCGATCATCGTTTTCCTCGGGCTACTGATGTCCAGGTATTAGGATGTAGTTCTTTGTCGAGGGATGATATTATGGCGGAATGGAATCTAAAAGAAGATGGGGTAGCTGTTGGAGTATTTATTGGTGCTTTGGATCTCTCAAACAGGGAAAAGAGTTGTTGTGCACGCTGTGTGTTGGTACCAGAACCTAGTCCTCCTTCAGCTGGGGCTCATGAAGAAGATTCATTGCACTCACCCGATATTGAGCTTCCACTTGCTGCACCCCTCCCTCTTCCCCTGTATCCTTCCTTCAATCTGAGCCACCTTCTGCTACTCATTCACCTACAGCAACATGTGTTCTCCTGA

Coding sequence (CDS)

ATGAGACGCCGAATGGATGGTGATGATGATGCTGATTTGAGGCCTGGTAACAACACTTTCCAAACCATTGCTGCGGCTGCCGATTTTATCGCCACCGTCGATCATCGTTTTCCTCGGGCTACTGATGTCCAGGTATTAGGATGTAGTTCTTTGTCGAGGGATGATATTATGGCGGAATGGAATCTAAAAGAAGATGGGGTAGCTGTTGGAGTATTTATTGGTGCTTTGGATCTCTCAAACAGGGAAAAGAGTTGTTGTGCACGCTGTGTGTTGGTACCAGAACCTAGTCCTCCTTCAGCTGGGGCTCATGAAGAAGATTCATTGCACTCACCCGATATTGAGCTTCCACTTGCTGCACCCCTCCCTCTTCCCCTGTATCCTTCCTTCAATCTGAGCCACCTTCTGCTACTCATTCACCTACAGCAACATGTGTTCTCCTGA

Protein sequence

MRRRMDGDDDADLRPGNNTFQTIAAAADFIATVDHRFPRATDVQVLGCSSLSRDDIMAEWNLKEDGVAVGVFIGALDLSNREKSCCARCVLVPEPSPPSAGAHEEDSLHSPDIELPLAAPLPLPLYPSFNLSHLLLLIHLQQHVFS
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh16G005960 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh16G005960 vs.
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G005960.1CmaCh16G005960.1mRNA