CmaCh16G005420 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G005420
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionchromatin modification-related protein EAF1 isoform X2
LocationCma_Chr16: 2783837 .. 2787670 (-)
RNA-Seq ExpressionCmaCh16G005420
SyntenyCmaCh16G005420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTAAACGACGTCGTTGCTTTCTTCTATATATAATGCCTCCGTTGCCCTATTTTTCTACCAAGTCTCCTCTTCCTTCGGCGGCAAGGAATTGACTCTCCCGCGAAGCTCAGGAAGTTTTCATTGTGTTCGTTTAGGTTCTTTGCGATTTTTCTGTCCTAAATCTTCACTGGTTTTTCTCCGATCCTTTTTCGAGCGACGAACTATCTTATCGTCAAGAGGTTTGTTATCTCTTCTCCGTTTGGATCTACGAGGTTTACTTTACGATGGAAACCCTAGAAGTTGTATCCGATTTCGTGATTCTTTTGTATTGATGTTATTTGATGTCTTGTGGGAGGCGTAGTAGATTATTGTACCTTCGGGTATGCCTTTTTATTTGATTTAAGGTTGAGTACGAGAGGAGAGTTCTTTGTTGTGTTGGGATTGTATTGTTGAAGGTCTGTTTTCGGATGAGTTTTCTGTTTCTGTAATTCAGTGCGAACTATATCTGCGCATGCTTTTCCCCCTTTCTTTGGTTGCCACGATGTAGTTTCTTTTCTTCCGGTGTTTCTTCGGTTTTTAATGAGACCTTGGAAGCATATTGTAATTGTTGACAACTTCTAGTTCTGCGACTGATGTGAGGACATGGATGGTTTCTCTTAGAGTTTTCCGAGGCCATATGCTCAATTTACGCAATAGAATTCTATTTCTTAATTATTTGAAGCTACCGTGTTGACGAACTGCATTATTTCGTTCGCTTTAAACCTATAAATTTTTCTCAGCCACCTTGCTTGCCAATTGTTTCTGCACTCGAGGATTTGCACCTATTGATATATTTGTGTTTTTTCCCCCAAACTGTTACCTTTCTTTTAGTTCCACTCTAACTTTTTATTTTGAATCTCATGTTAGATGGCGGCTAAACCACTTACAACTGAGGCTATTGCCGTAACTGAGAAGAAGATGGACATGGCTTTAGGTTGGGCTTCGGAATATCTTTCAGTACTTGAGAATTTATGGGCCTCTTGAAAATTTATTGATTATTCTGTTTCTACATTTTTTGTTGTTGAATTAGACGATATTATCAAAATGTCCAAAATTACTGGAAATAAAGCCAGGAAGGAAAGAAGGTTTCCGGTAAGAATCTTTTATTTTTAGCATGCCTTTAACCTGAGCAGTTTATTGTTGAATGTGGGAGTCTTCCTTTTATTATATGTGTAGTGATTTATCTTTCCATTTGCAGAACAAAATGCAGAAATTTCCAAATAATGTCACTCAAGATAGACCTAGGAAGTTGCAGCGTTTCATGGATTCAAGATCTTCTGTAAGACAGGTTTGTACAGTTATTTAGCTTGAATATCATTTATTTTGCTTCTTTTTTTCTTTGTATGACGAGTTCCGAATTTTCATTTTGTATTTAGGGGGCTTTGGCCAAAAGAAGGTCAAATTTTCAAGGGAATCAATTTGCTTTGACAACTGAGGTTTCCAGAAGGGCTGTAGTTGCTCCAACTCGCCCCAGAGCTTTTTATCGTAGGGCACCCAACTGGAATAAGACAAGGTATACGACTATACAATTTTAGCCTACGGAAAGCTCTCATTGTGAATTATGATTATATGTTTTACTTCAGCTACCCTGGCAACATACCTAAACTATATGATAGTTTTAAAGAAGAAATTTATTACAGAGACAATTTTAATTTGATGGCTGGTTTGTTTAATTTTTTATTTGATGCTATGACAGGTAAATCACGTTTATACACAATTGATGATTTCTACAGTGTCCAAGTTTTAAATATGAAGTTAGAAACATAATATGTTGGTTGGATAAGCTGGATGATAAGTTTTTGCTTCAACCAGTTGAATTGGAGTGGGAGTATTTCCAATTATTTTGTTTCTTCCATTCTACCTGGGAATTGATTCTGCTTTATCTTCTTAAGTTTGGTTCTGGAATGCATTGAGTTATCTTTTGGTTGTCTGACAAGTAAGTGCTTGGTGGGAGTTTCAGTTGCTGGGACAAAGATAATTTGAACTTTTGATTGAATTTGATTGCTGCGAACATCTGGAAAAATGTGGTGTGGTGAAAAGGGCTTTTGTGTTCATTGGATGAGTGTGTATAGTTTTGAGTTTTAGCTCCTTATTGAATGTGCTTATTGTCTTGGGTTTCTCAAGTCTTCTTAGACAATCTACAATATTATAGCAGCCTCTTCCAGATTCCCTTTTGTTGCATTGATGTGGAAGCTGTTTGCAAGATGTGATGTTTTTAGAACAGGAGTTGACTGAGATTGTGGCACCGTCTCTTTAACGGTTATTCCACAATTGTCTCTTGTTCATTATGTTCAAAGTTTGCTGCTGTGAACTTTCATTCCTTGTGATGACAGTCGATATATCTTTGTTTGCTTGCAATAAGGGATGCAAAGAACCCTAGGGGTTGCTGTGATGTCAGAATTTGCACATCTTTCTATGTTAATGATCCGTCTGCTAGTTTTGTTGATTCCACTTGGTGTTCTCTTTTCGTTTGCTGTTACATCCTGGGTACATTTGTCAGCCTTCCAACTACCATGTCTTGACAAGTCTCTCAGTAATTCTACTTCTTGACTAACGGTAAAACTGCAAATGAGGAAACCCTCGACTCTGGAAAGTTTTCCACTTGTGAAAAATGCTTCTTTATCCCTGTAGTCAGCCTGACCCGAGGAATATGACATCTCATCATCTTTAGTAGATACTTGGGGATGAATTGAAATTGCGTTTGTTGCAAGTAAAACAAGAACTGTGTACTTCTGGTCATTTGTCGTTTCATAATTCTATGAATAACGAAAGTGCTGAAGAAATTAAGTATGGTTAGTTAAAATGTGTTGAACAATGGCATTTATGGCTTCTTCTATGAGGTATTATGTGTAGACTTCGGTTTTATCCACGTGGAATACACTAGTACTGCAGAAATTCATGCTACTGCCGCGTTTAAATCATATCCTGGTTGAAGCCTTCATTTTCTGGTTCAAGTTCCGGACAGGAGTCTTCCTGCGGAGCAGTTTATCTGTTCATTGATAATACTAGTTTGGAGCTTTCATTGTGCATTAAAGCAAGCCAAGCGTGCGATGATTGATTTGAGGTTCTGGTTTTGCTATTATAACTGGACAGTGCTTTTTTTGGATTGGCAAGCGCAACACATTTTGAGCTGATTCTCTTTTTTTGATGACTGCATTCTCATGATCTGGTTTGTTTTTTATTTCTGTTAATGGGATACCATTTGAATTTGCTCATCGAGGTAAGATTCTCTGATCTATCTGCATACTGCCGCTCAAGGAGTGTTGAAAATATCTGGGTTTGTGGAAGTTTAATTTGGATAGTCATTTTTTTACCTAGCGGGTCTACTTATAAATGTTATTTCTTTTGTTCATCAATCATTTCAATAATATTTGGTGCAGGGTTGATGCTCCACCGGTTCCAAGGAAGCCTTTTAATAATCGAACCTTTGTTCCCAAGGTACTGTGTTTGTAACTGAGTTTTGGTCTGAAGTAGTGAAGTTACTCCATCAAATGAGATGATGAATGCAAGTTTGGATCGCAGTTAGTTTAATCTCATCTATTCCCCCTTCTTCCCTTCTCCAGGTAGCTGCACCGGCCCAGCCACAAACCAATGCTACGCAGAGACAGAGACCACAAACAAATGCTACGCAGAGACAGAGACCACAAACATATGCTACGCAGAGACAGAGACCACAAACTCTGGACTCACTGTTTGCCAACATGAAGGAACAGAGGCTGAGGGTGTTGTCACAGCGACAGAATGGCGCCGCACAACAACGGAATGGTGGTCGCCAGCAAATACCTCCATGGCAAAGAGGCCGTTTTGGTAACTGA

mRNA sequence

ACTAAACGACGTCGTTGCTTTCTTCTATATATAATGCCTCCGTTGCCCTATTTTTCTACCAAGTCTCCTCTTCCTTCGGCGGCAAGGAATTGACTCTCCCGCGAAGCTCAGGAAGTTTTCATTGTGTTCGTTTAGGTTCTTTGCGATTTTTCTGTCCTAAATCTTCACTGGTTTTTCTCCGATCCTTTTTCGAGCGACGAACTATCTTATCGTCAAGAGATGGCGGCTAAACCACTTACAACTGAGGCTATTGCCGTAACTGAGAAGAAGATGGACATGGCTTTAGACGATATTATCAAAATGTCCAAAATTACTGGAAATAAAGCCAGGAAGGAAAGAAGGTTTCCGAACAAAATGCAGAAATTTCCAAATAATGTCACTCAAGATAGACCTAGGAAGTTGCAGCGTTTCATGGATTCAAGATCTTCTGTAAGACAGGGGGCTTTGGCCAAAAGAAGGTCAAATTTTCAAGGGAATCAATTTGCTTTGACAACTGAGGTTTCCAGAAGGGCTGTAGTTGCTCCAACTCGCCCCAGAGCTTTTTATCGTAGGGCACCCAACTGGAATAAGACAAGGGTTGATGCTCCACCGGTTCCAAGGAAGCCTTTTAATAATCGAACCTTTGTTCCCAAGGTAGCTGCACCGGCCCAGCCACAAACCAATGCTACGCAGAGACAGAGACCACAAACAAATGCTACGCAGAGACAGAGACCACAAACATATGCTACGCAGAGACAGAGACCACAAACTCTGGACTCACTGTTTGCCAACATGAAGGAACAGAGGCTGAGGGTGTTGTCACAGCGACAGAATGGCGCCGCACAACAACGGAATGGTGGTCGCCAGCAAATACCTCCATGGCAAAGAGGCCGTTTTGGTAACTGA

Coding sequence (CDS)

ATGGCGGCTAAACCACTTACAACTGAGGCTATTGCCGTAACTGAGAAGAAGATGGACATGGCTTTAGACGATATTATCAAAATGTCCAAAATTACTGGAAATAAAGCCAGGAAGGAAAGAAGGTTTCCGAACAAAATGCAGAAATTTCCAAATAATGTCACTCAAGATAGACCTAGGAAGTTGCAGCGTTTCATGGATTCAAGATCTTCTGTAAGACAGGGGGCTTTGGCCAAAAGAAGGTCAAATTTTCAAGGGAATCAATTTGCTTTGACAACTGAGGTTTCCAGAAGGGCTGTAGTTGCTCCAACTCGCCCCAGAGCTTTTTATCGTAGGGCACCCAACTGGAATAAGACAAGGGTTGATGCTCCACCGGTTCCAAGGAAGCCTTTTAATAATCGAACCTTTGTTCCCAAGGTAGCTGCACCGGCCCAGCCACAAACCAATGCTACGCAGAGACAGAGACCACAAACAAATGCTACGCAGAGACAGAGACCACAAACATATGCTACGCAGAGACAGAGACCACAAACTCTGGACTCACTGTTTGCCAACATGAAGGAACAGAGGCTGAGGGTGTTGTCACAGCGACAGAATGGCGCCGCACAACAACGGAATGGTGGTCGCCAGCAAATACCTCCATGGCAAAGAGGCCGTTTTGGTAACTGA

Protein sequence

MAAKPLTTEAIAVTEKKMDMALDDIIKMSKITGNKARKERRFPNKMQKFPNNVTQDRPRKLQRFMDSRSSVRQGALAKRRSNFQGNQFALTTEVSRRAVVAPTRPRAFYRRAPNWNKTRVDAPPVPRKPFNNRTFVPKVAAPAQPQTNATQRQRPQTNATQRQRPQTYATQRQRPQTLDSLFANMKEQRLRVLSQRQNGAAQQRNGGRQQIPPWQRGRFGN
Homology
[Close]
BLAST of CmaCh16G005420 vs. TAIR 10
Match: AT4G10970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-29
Identity = 97/220 (44.09%), Postives = 130/220 (59.09%), Query Frame = 0 

Query: 4   KPLTTEAIAVTEKKMDMALDDIIKMSKITGNKAR-KERRFPNKMQKFPNNVTQDRPRKLQ 63
           KP+TTE +A+TEKKMDM+LD+IIKM K   N  + K++R  NK +KF +   ++   K Q
Sbjct: 5   KPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVLNKKEKF-SGAAKNSAVKAQ 64

Query: 64  RFMDSRSSVRQGALAKRRSNFQGNQFALTTEVSRRAVVAPTRPRAFY-RRAPNWNKTRVD 123
           R+MDSRS VRQGA AK+RSNFQGNQF +TT V+R+A  A  R R +   R  N N++R  
Sbjct: 65  RYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSRFI 124

Query: 124 APPVPRKPFNNRTFVPKVAAPAQPQTNATQRQRPQTNATQRQRPQTYATQRQRPQTLDSL 183
           APP   +  + R FV K            Q+Q+ +    Q+Q       QRQ PQTLDS 
Sbjct: 125 APPAQNRA-SQRGFVGK------------QQQQQREKIVQQQANGGGGGQRQWPQTLDSR 184

Query: 184 FANMKEQRLRVLSQRQNGAAQQRNGG-----RQQIPPWQR 217
           FANMKE+R+R+     N +    NG      ++ + PW R
Sbjct: 185 FANMKEERMRMRRFADNRSNVGNNGAGSHQQQRSMVPWVR 210

[Close]
BLAST of CmaCh16G005420 vs. TAIR 10
Match: AT4G10970.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-29
Identity = 97/220 (44.09%), Postives = 130/220 (59.09%), Query Frame = 0 

Query: 4   KPLTTEAIAVTEKKMDMALDDIIKMSKITGNKAR-KERRFPNKMQKFPNNVTQDRPRKLQ 63
           KP+TTE +A+TEKKMDM+LD+IIKM K   N  + K++R  NK +KF +   ++   K Q
Sbjct: 5   KPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVLNKKEKF-SGAAKNSAVKAQ 64

Query: 64  RFMDSRSSVRQGALAKRRSNFQGNQFALTTEVSRRAVVAPTRPRAFY-RRAPNWNKTRVD 123
           R+MDSRS VRQGA AK+RSNFQGNQF +TT V+R+A  A  R R +   R  N N++R  
Sbjct: 65  RYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSRFI 124

Query: 124 APPVPRKPFNNRTFVPKVAAPAQPQTNATQRQRPQTNATQRQRPQTYATQRQRPQTLDSL 183
           APP   +  + R FV K            Q+Q+ +    Q+Q       QRQ PQTLDS 
Sbjct: 125 APPAQNRA-SQRGFVGK------------QQQQQREKIVQQQANGGGGGQRQWPQTLDSR 184

Query: 184 FANMKEQRLRVLSQRQNGAAQQRNGG-----RQQIPPWQR 217
           FANMKE+R+R+     N +    NG      ++ + PW R
Sbjct: 185 FANMKEERMRMRRFADNRSNVGNNGAGSHQQQRSMVPWVR 210

[Close]
BLAST of CmaCh16G005420 vs. TAIR 10
Match: AT4G10970.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-29
Identity = 97/220 (44.09%), Postives = 130/220 (59.09%), Query Frame = 0 

Query: 4   KPLTTEAIAVTEKKMDMALDDIIKMSKITGNKAR-KERRFPNKMQKFPNNVTQDRPRKLQ 63
           KP+TTE +A+TEKKMDM+LD+IIKM K   N  + K++R  NK +KF +   ++   K Q
Sbjct: 5   KPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVLNKKEKF-SGAAKNSAVKAQ 64

Query: 64  RFMDSRSSVRQGALAKRRSNFQGNQFALTTEVSRRAVVAPTRPRAFY-RRAPNWNKTRVD 123
           R+MDSRS VRQGA AK+RSNFQGNQF +TT V+R+A  A  R R +   R  N N++R  
Sbjct: 65  RYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSRFI 124

Query: 124 APPVPRKPFNNRTFVPKVAAPAQPQTNATQRQRPQTNATQRQRPQTYATQRQRPQTLDSL 183
           APP   +  + R FV K            Q+Q+ +    Q+Q       QRQ PQTLDS 
Sbjct: 125 APPAQNRA-SQRGFVGK------------QQQQQREKIVQQQANGGGGGQRQWPQTLDSR 184

Query: 184 FANMKEQRLRVLSQRQNGAAQQRNGG-----RQQIPPWQR 217
           FANMKE+R+R+     N +    NG      ++ + PW R
Sbjct: 185 FANMKEERMRMRRFADNRSNVGNNGAGSHQQQRSMVPWVR 210

[Close]
BLAST of CmaCh16G005420 vs. TAIR 10
Match: AT4G10970.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-29
Identity = 97/220 (44.09%), Postives = 130/220 (59.09%), Query Frame = 0 

Query: 4   KPLTTEAIAVTEKKMDMALDDIIKMSKITGNKAR-KERRFPNKMQKFPNNVTQDRPRKLQ 63
           KP+TTE +A+TEKKMDM+LD+IIKM K   N  + K++R  NK +KF +   ++   K Q
Sbjct: 5   KPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVLNKKEKF-SGAAKNSAVKAQ 64

Query: 64  RFMDSRSSVRQGALAKRRSNFQGNQFALTTEVSRRAVVAPTRPRAFY-RRAPNWNKTRVD 123
           R+MDSRS VRQGA AK+RSNFQGNQF +TT V+R+A  A  R R +   R  N N++R  
Sbjct: 65  RYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSRFI 124

Query: 124 APPVPRKPFNNRTFVPKVAAPAQPQTNATQRQRPQTNATQRQRPQTYATQRQRPQTLDSL 183
           APP   +  + R FV K            Q+Q+ +    Q+Q       QRQ PQTLDS 
Sbjct: 125 APPAQNRA-SQRGFVGK------------QQQQQREKIVQQQANGGGGGQRQWPQTLDSR 184

Query: 184 FANMKEQRLRVLSQRQNGAAQQRNGG-----RQQIPPWQR 217
           FANMKE+R+R+     N +    NG      ++ + PW R
Sbjct: 185 FANMKEERMRMRRFADNRSNVGNNGAGSHQQQRSMVPWVR 210

[Close]
BLAST of CmaCh16G005420 vs. TAIR 10
Match: AT4G10970.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 52 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-20
Identity = 85/210 (40.48%), Postives = 116/210 (55.24%), Query Frame = 0 

Query: 18  MDMALDDIIKMSKITGNKAR-KERRFPNKMQKFPNNVTQDRPRKLQRFMDSRSSVRQGAL 77
           MDM+LD+IIKM K   N  + K++R  NK +KF +   ++   K QR+MDSRS VRQGA 
Sbjct: 1   MDMSLDEIIKMEKSNTNVNKGKKQRVLNKKEKF-SGAAKNSAVKAQRYMDSRSDVRQGAF 60

Query: 78  AKRRSNFQGNQFALTTEVSRRAVVAPTRPRAFYRRAPNWNKTRVDAPPVPRKPFNNRTFV 137
           AK+RSNFQGNQF +TT V+R+A  A  R R  Y      N  +     V R  + +  F 
Sbjct: 61  AKKRSNFQGNQFPVTTTVARKAASATPRGRP-YNGGRMTNTNQSSWSIVGRLKWVDARF- 120

Query: 138 PKVAAPAQPQTN-----ATQRQRPQTNATQRQRPQTYATQRQRPQTLDSLFANMKEQRLR 197
             +A PAQ + +       Q+Q+ +    Q+Q       QRQ PQTLDS FANMKE+R+R
Sbjct: 121 --IAPPAQNRASQRGFVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMR 180

Query: 198 VLSQRQNGAAQQRNGG-----RQQIPPWQR 217
           +     N +    NG      ++ + PW R
Sbjct: 181 MRRFADNRSNVGNNGAGSHQQQRSMVPWVR 205

The following BLAST results are available for this feature:
BLAST of CmaCh16G005420 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh16G005420 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G10970.11.3e-2944.09unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10970.21.3e-2944.09unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10970.31.3e-2944.09unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10970.41.3e-2944.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G10970.51.9e-2040.48unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..221
NoneNo IPR availablePANTHERPTHR36048RIBOSOME MATURATION FACTORcoord: 1..221
NoneNo IPR availablePANTHERPTHR36048:SF1RIBOSOME MATURATION FACTORcoord: 1..221

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G005420.1CmaCh16G005420.1mRNA