CmaCh16G005360 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G005360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RNA polymerase II transcriptional coactivator KELP-like
Location	Cma_Chr16: 2743423 .. 2745863 (-)
RNA-Seq Expression	CmaCh16G005360
Synteny	CmaCh16G005360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCAAAATCCAACGTAGAATCGAGGAAGCCGTCCGCAGAATTCTCGAATCCTCCGACATGGACGAAATGACCGAGTCCAAAATTCGAGCCCTTGCCTCTAAGGACCTCGACCTCGACCTCTCCAAATCCCCTTACAAGGCTCTGGTTCGCAAGGTTGTGGAATCCTTCCTCCAAAAACGGTCTGAAGATCAGCTGCAAGAGGAGGCCGAGGATGCCTCTGCAGATCAGCTGCAAGAGGAGGCCGAGGATGCCTCTGCAGATCAGCTGCAAGAGGAGGCCGAGGATGCCTCTGCTGCTAAGGAAAAGGAGTACGACGACGATGGCGATCTCATTGTTTGTTGGGTTTGTTTTTATTTTTTTCTGCCTCTTCTCCTTGCTAGTAGTTTGCGGTTGCAGTTCTTTCTGTTTATTAGTGGAGATTTGACTATTTTTTTTTTAAGTTCTGATTGTATATTTGTGGTAAAACTTCAAAATATGGTGTTATTTGGCTCAGTTATCCAGCAAGAGGAAGGTGACGATTCAGGATTTTAGAGGGAAGACTCTGGTTTCGATCAGGGAGTTTTATAGAAAGGATGGGAAAGACCTCCCTACAGCAAAAGGTAATTCTCCAAATGCTCTACTTGCTTGCGTTTGTGAAATTTTGTATGTCAATATATTGCTTACAGAGACTACAAATTAGGCGAAACTCCTGTTATATGTGTGCTTCTTGTTTGATTTTGTGAAGATAGTGAGCATTCTACTACTCCATAACCACACTGATGCATTGAAAACTTTTACTGAGTGAAGCAATTGAAAGTGGGAGAAATCACTGTTTCTTAGAACATGTTGGTGAACTATAAGTAAAAACGAAACAATTATTGGCTTGACATGGGAAGTGGGAAGATGATTTTCGTTGAAATATAAGGCAGTTCACTTTGTCGAAGTTAAATGTGCAACCAGGGCCACACATTTGATTTGTGATGTCTCTGATACAAGGTAATGTGTGAAACTTGTATGAGTCTAATATGAATAGAGTGAGGAACAGGGATGATATTTATAAAACCACTGCATGTTGATCTCTTTGTTCGTGAACTTGGATCTATGATTAAACTTTAGGTTAAATTACAAATTTAGATATGTGTCGATTCGGTCTCTAAATTTTCAACTTTGTATCTAATTGATTCTTAAACTTTCAATTTTTTGTCTAATTGATGCCTGAACGTTCAATTTTGTGTTTAATAGTTTCTTAACAAATTCATTGATCTATTAGGTATAAATTTAAATCTGATGTCTAATGAAAACCTAAACTTTCAATTTTGAGTTTGATAGATCCATGAATTTTAACAAATATGAAAGTTCATATCCAATAGAAGTTTGTCCGGTAGCCAACCTAGCAAACCTAGCAACAATAACAGAAGCGGAAGAAATAGGTGGATTCATGATAAGTTACTCACACCAAATGAAAGAAATGGTTAATGATACAGTCAACCAAAGAAACTTATTATTATATTTCTAAGATTTATCTAAGTAAAAACTCCCGAATGAAGTAATAATATTATTGAATCCTTCGAACTAGTTCAATATTCCTTTTTTAGTTCCTACCTATTCCTTCTTTAGTTCCTATCCTTCCTCGTCTTCTTTCTATTTCTTTAATTTTTACTTAAGTATCCTTTGAATTCTCTGTTCTTTTTTCTGGATTTAATCTCTCTATTCATTCAATATTCAATTCAAAACTACATGACAGATGAAACAATGGAATAAATTTGTAATGTTGAAAGTTTAGAGATCAAATAATTTGTAATTTAAGCTCAAACGTGTATAACTTTTTTCTTTTGTTTTGGAAATTTAAATGGCTTGTTTTTTTAGATTAATAACACTGGTCTTATTTTTGCCTCAGGAATAAGCTTGACTGAGGAACAGTGGTCCGTCTTTAAGAACAATGTACCTGCCATAGAAAAAGCTATTAAGAATATGCAATCACAAATAATGTGAAGTAAGTTATCGCCTGACAGTTGATGGTTTGAAGCCTTGTACAGTTGATGGTTTGAAGCCTTGTACAGTTGATGGTTTGAAGCCTTGATGCTGAGTATCTATGGAATCCAGATTTACCACCGTGAAAAGGGGAAGGAATAGCACTTTTGGGAATTGCTGCAGTTTGTTGGTTGCACAATATTTTGGTATTTTGGTACTTCTGTTTTGAGCCTAGACCGCCAACACTTATAAAAACTTCAAGCTACTTACCTGTGCATTCATGGCATCAAGAACTGTGGTACACATTCTCCATCACCGGAACTCATAATGATGAATGATCTCTTATCTTTTTGTTTAATGCTAAAAAACGCATGACACTAATATAAATGTGTGCCATCCCAGCCATGCCATGAAGGGTTAAATGTCTGACATTTGATATCGAACTGATTATAATTTAGGAGGCTGAAATTAGGCTGTGACTATCT

mRNA sequence

ATGGATTCCAAAATCCAACGTAGAATCGAGGAAGCCGTCCGCAGAATTCTCGAATCCTCCGACATGGACGAAATGACCGAGTCCAAAATTCGAGCCCTTGCCTCTAAGGACCTCGACCTCGACCTCTCCAAATCCCCTTACAAGGCTCTGGTTCGCAAGGTTGTGGAATCCTTCCTCCAAAAACGGTCTGAAGATCAGCTGCAAGAGGAGGCCGAGGATGCCTCTGCAGATCAGCTGCAAGAGGAGGCCGAGGATGCCTCTGCAGATCAGCTGCAAGAGGAGGCCGAGGATGCCTCTGCTGCTAAGGAAAAGGAGTACGACGACGATGGCGATCTCATTGTTTGTTGGTTATCCAGCAAGAGGAAGGTGACGATTCAGGATTTTAGAGGGAAGACTCTGGTTTCGATCAGGGAGTTTTATAGAAAGGATGGGAAAGACCTCCCTACAGCAAAAGGAATAAGCTTGACTGAGGAACAGTGGTCCGTCTTTAAGAACAATGTACCTGCCATAGAAAAAGCTATTAAGAATATGCAATCACAAATAATGTGAAGTAAGTTATCGCCTGACAGTTGATGGTTTGAAGCCTTGTACAGTTGATGGTTTGAAGCCTTGTACAGTTGATGGTTTGAAGCCTTGATGCTGAGTATCTATGGAATCCAGATTTACCACCGTGAAAAGGGGAAGGAATAGCACTTTTGGGAATTGCTGCAGTTTGTTGGTTGCACAATATTTTGGTATTTTGGTACTTCTGTTTTGAGCCTAGACCGCCAACACTTATAAAAACTTCAAGCTACTTACCTGTGCATTCATGGCATCAAGAACTGTGGTACACATTCTCCATCACCGGAACTCATAATGATGAATGATCTCTTATCTTTTTGTTTAATGCTAAAAAACGCATGACACTAATATAAATGTGTGCCATCCCAGCCATGCCATGAAGGGTTAAATGTCTGACATTTGATATCGAACTGATTATAATTTAGGAGGCTGAAATTAGGCTGTGACTATCT

Coding sequence (CDS)

ATGGATTCCAAAATCCAACGTAGAATCGAGGAAGCCGTCCGCAGAATTCTCGAATCCTCCGACATGGACGAAATGACCGAGTCCAAAATTCGAGCCCTTGCCTCTAAGGACCTCGACCTCGACCTCTCCAAATCCCCTTACAAGGCTCTGGTTCGCAAGGTTGTGGAATCCTTCCTCCAAAAACGGTCTGAAGATCAGCTGCAAGAGGAGGCCGAGGATGCCTCTGCAGATCAGCTGCAAGAGGAGGCCGAGGATGCCTCTGCAGATCAGCTGCAAGAGGAGGCCGAGGATGCCTCTGCTGCTAAGGAAAAGGAGTACGACGACGATGGCGATCTCATTGTTTGTTGGTTATCCAGCAAGAGGAAGGTGACGATTCAGGATTTTAGAGGGAAGACTCTGGTTTCGATCAGGGAGTTTTATAGAAAGGATGGGAAAGACCTCCCTACAGCAAAAGGAATAAGCTTGACTGAGGAACAGTGGTCCGTCTTTAAGAACAATGTACCTGCCATAGAAAAAGCTATTAAGAATATGCAATCACAAATAATGTGA

Protein sequence

MDSKIQRRIEEAVRRILESSDMDEMTESKIRALASKDLDLDLSKSPYKALVRKVVESFLQKRSEDQLQEEAEDASADQLQEEAEDASADQLQEEAEDASAAKEKEYDDDGDLIVCWLSSKRKVTIQDFRGKTLVSIREFYRKDGKDLPTAKGISLTEEQWSVFKNNVPAIEKAIKNMQSQIM

Homology

[Close]

BLAST of CmaCh16G005360 vs. ExPASy Swiss-Prot
Match: O65155 (RNA polymerase II transcriptional coactivator KELP OS=Arabidopsis thaliana OX=3702 GN=KELP PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.7e-40
Identity = 93/181 (51.38%), Postives = 124/181 (68.51%), Query Frame = 0


Query: 1   MDSKIQRRIEEAVRRILESSDMDEMTESKIRALASKDLDLDLSKSPYKALVRKVVESFLQ 60
           M+ + + +IE+ V  IL  SDM E+TE K+R LAS+ L +DLS+  +KA VR VVE FL 
Sbjct: 1   MEKETKEKIEKTVIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLD 60

Query: 61  KRSEDQLQEEAEDASADQLQEEAEDASADQLQEEAEDASAAKEKEYDDDGDLIVCWLSSK 120
                  +E A +    Q+ +E ED   D              KE+DDDGDLI+C LS K
Sbjct: 61  -------EERAREYENSQVNKEEEDGDKD---------CGKGNKEFDDDGDLIICRLSDK 120

Query: 121 RKVTIQDFRGKTLVSIREFYRKDGKDLPTAKGISLTEEQWSVFKNNVPAIEKAIKNMQSQ 180
           R+VTIQ+F+GK+LVSIRE+Y+KDGK+LPT+KGISLT+EQWS FK N+PAIE A+K M+S+
Sbjct: 121 RRVTIQEFKGKSLVSIREYYKKDGKELPTSKGISLTDEQWSTFKKNMPAIENAVKKMESR 165

Query: 181 I 182
           +
Sbjct: 181 V 165

[Close]

BLAST of CmaCh16G005360 vs. ExPASy Swiss-Prot
Match: O65154 (RNA polymerase II transcriptional coactivator KIWI OS=Arabidopsis thaliana OX=3702 GN=KIWI PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.9e-11
Identity = 40/105 (38.10%), Postives = 65/105 (61.90%), Query Frame = 0


Query: 74  ASADQLQEEAEDASADQLQEEAEDASAAK-EKEYDDDGDLIVCWLSSKRKVTIQDFRGKT 133
           +S  + ++E   AS D+ +  A     AK   + D   D++VC +S  R+V+++++ GK 
Sbjct: 2   SSRGKRKDEDVRASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGKI 61

Query: 134 LVSIREFYRKDGKDLPTAKGISLTEEQWSVFKNNVPAIEKAIKNM 178
            + IREFY KDGK LP  KGISL+ +QW+  +N+   IEKA+ ++
Sbjct: 62  WIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDIEKALSDL 106

[Close]

BLAST of CmaCh16G005360 vs. ExPASy Swiss-Prot
Match: Q9FHX8 (Mediator-associated protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g42060 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.6e-07
Identity = 29/61 (47.54%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 1  MDSKIQRRIEEAVRRILESSDMDEMTESKIRALASKDLDLDLSKSPYKALVRKVVESFLQ 60
          +D  ++R+I++ V++ILESS++ ++TE K R  AS  LDLDLS+ PYK +V++ VE+FL+
Sbjct: 11 IDKDLRRKIKKTVKKILESSNLYKITEIKAREEASLKLDLDLSQDPYKVIVKEEVENFLE 70

Query: 61 K 62
          +
Sbjct: 71 E 71

[Close]

BLAST of CmaCh16G005360 vs. ExPASy Swiss-Prot
Match: P53999 (Activated RNA polymerase II transcriptional coactivator p15 OS=Homo sapiens OX=9606 GN=SUB1 PE=1 SV=3)

HSP 1 Score: 50.4 bits (119), Expect = 2.4e-05
Identity = 28/86 (32.56%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 93  EEAEDASAAKEKEYDDDGDLIVCWLSSKRKVTIQDFRGKTLVSIREFYR-KDGKDLPTAK 152
           E +   S++K+     D ++    +   R V+++DF+GK L+ IRE++   +G+  P  K
Sbjct: 44  ETSRALSSSKQSSSSRDDNMF--QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRK 103

Query: 153 GISLTEEQWSVFKNNVPAIEKAIKNM 178
           GISL  EQWS  K  +  I+ A++ +
Sbjct: 104 GISLNPEQWSQLKEQISDIDDAVRKL 127

[Close]

BLAST of CmaCh16G005360 vs. ExPASy Swiss-Prot
Match: Q4R947 (Activated RNA polymerase II transcriptional coactivator p15 OS=Macaca fascicularis OX=9541 GN=SUB1 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.4e-05
Identity = 28/86 (32.56%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 93  EEAEDASAAKEKEYDDDGDLIVCWLSSKRKVTIQDFRGKTLVSIREFYR-KDGKDLPTAK 152
           E +   S++K+     D ++    +   R V+++DF+GK L+ IRE++   +G+  P  K
Sbjct: 44  ETSRALSSSKQSSSSRDDNMF--QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRK 103

Query: 153 GISLTEEQWSVFKNNVPAIEKAIKNM 178
           GISL  EQWS  K  +  I+ A++ +
Sbjct: 104 GISLNPEQWSQLKEQISDIDDAVRKL 127

[Close]

BLAST of CmaCh16G005360 vs. TAIR 10
Match: AT4G10920.1 (transcriptional coactivator p15 (PC4) family protein (KELP) )

HSP 1 Score: 165.2 bits (417), Expect = 4.8e-41
Identity = 93/181 (51.38%), Postives = 124/181 (68.51%), Query Frame = 0


Query: 1   MDSKIQRRIEEAVRRILESSDMDEMTESKIRALASKDLDLDLSKSPYKALVRKVVESFLQ 60
           M+ + + +IE+ V  IL  SDM E+TE K+R LAS+ L +DLS+  +KA VR VVE FL 
Sbjct: 1   MEKETKEKIEKTVIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLD 60

Query: 61  KRSEDQLQEEAEDASADQLQEEAEDASADQLQEEAEDASAAKEKEYDDDGDLIVCWLSSK 120
                  +E A +    Q+ +E ED   D              KE+DDDGDLI+C LS K
Sbjct: 61  -------EERAREYENSQVNKEEEDGDKD---------CGKGNKEFDDDGDLIICRLSDK 120

Query: 121 RKVTIQDFRGKTLVSIREFYRKDGKDLPTAKGISLTEEQWSVFKNNVPAIEKAIKNMQSQ 180
           R+VTIQ+F+GK+LVSIRE+Y+KDGK+LPT+KGISLT+EQWS FK N+PAIE A+K M+S+
Sbjct: 121 RRVTIQEFKGKSLVSIREYYKKDGKELPTSKGISLTDEQWSTFKKNMPAIENAVKKMESR 165

Query: 181 I 182
           +
Sbjct: 181 V 165

[Close]

BLAST of CmaCh16G005360 vs. TAIR 10
Match: AT4G10920.2 (transcriptional coactivator p15 (PC4) family protein (KELP) )

HSP 1 Score: 165.2 bits (417), Expect = 4.8e-41
Identity = 93/181 (51.38%), Postives = 124/181 (68.51%), Query Frame = 0


Query: 1   MDSKIQRRIEEAVRRILESSDMDEMTESKIRALASKDLDLDLSKSPYKALVRKVVESFLQ 60
           M+ + + +IE+ V  IL  SDM E+TE K+R LAS+ L +DLS+  +KA VR VVE FL 
Sbjct: 1   MEKETKEKIEKTVIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLD 60

Query: 61  KRSEDQLQEEAEDASADQLQEEAEDASADQLQEEAEDASAAKEKEYDDDGDLIVCWLSSK 120
                  +E A +    Q+ +E ED   D              KE+DDDGDLI+C LS K
Sbjct: 61  -------EERAREYENSQVNKEEEDGDKD---------CGKGNKEFDDDGDLIICRLSDK 120

Query: 121 RKVTIQDFRGKTLVSIREFYRKDGKDLPTAKGISLTEEQWSVFKNNVPAIEKAIKNMQSQ 180
           R+VTIQ+F+GK+LVSIRE+Y+KDGK+LPT+KGISLT+EQWS FK N+PAIE A+K M+S+
Sbjct: 121 RRVTIQEFKGKSLVSIREYYKKDGKELPTSKGISLTDEQWSTFKKNMPAIENAVKKMESR 165

Query: 181 I 182
           +
Sbjct: 181 V 165

[Close]

BLAST of CmaCh16G005360 vs. TAIR 10
Match: AT4G00980.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-13
Identity = 64/181 (35.36%), Postives = 90/181 (49.72%), Query Frame = 0


Query: 1   MDSKIQRRIEEAVRRILESSDMDEMTESKIRALASKDLDLDLSKSPYKALVRKVVESFLQ 60
           M+    ++IEE V+ IL  SDMD+MTE K+R  AS  L +DLS + +K LVR V+E FL 
Sbjct: 12  MEIVATQKIEETVKSILSESDMDQMTEFKLRLDASAKLGIDLSGTNHKKLVRDVLEVFLL 71

Query: 61  KRSEDQLQEEAEDASADQLQEEAEDASADQLQEEAEDASAAKEKEYDDDGDLIVCWLSSK 120
               + L  E    + ++    A              AS   E E        +C LS K
Sbjct: 72  STPGEALVPETVAPAKNETVSVAA-------------ASVGGEDE------RFICKLSEK 131

Query: 121 RKVTIQDFRGKTLVSIREFYRKDGKDLPTAKGISLTEEQWSVFKNNVPAIEKAIKNMQSQ 180
           +  T+Q +RG+  +SI    ++ GK     +G  L+  QWSV K N  AIE  IK  QS+
Sbjct: 132 QNATVQRYRGQPFLSIGS--QEHGK---AFRGAHLSTNQWSVIKKNFAAIEDGIKQCQSK 168

Query: 181 I 182
           +
Sbjct: 192 L 168

[Close]

BLAST of CmaCh16G005360 vs. TAIR 10
Match: AT5G09250.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 70.1 bits (170), Expect = 2.1e-12
Identity = 40/105 (38.10%), Postives = 65/105 (61.90%), Query Frame = 0


Query: 74  ASADQLQEEAEDASADQLQEEAEDASAAK-EKEYDDDGDLIVCWLSSKRKVTIQDFRGKT 133
           +S  + ++E   AS D+ +  A     AK   + D   D++VC +S  R+V+++++ GK 
Sbjct: 2   SSRGKRKDEDVRASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGKI 61

Query: 134 LVSIREFYRKDGKDLPTAKGISLTEEQWSVFKNNVPAIEKAIKNM 178
            + IREFY KDGK LP  KGISL+ +QW+  +N+   IEKA+ ++
Sbjct: 62  WIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDIEKALSDL 106

[Close]

BLAST of CmaCh16G005360 vs. TAIR 10
Match: AT1G64490.1 (DEK, chromatin associated protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08
Identity = 28/61 (45.90%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 1  MDSKIQRRIEEAVRRILESSDMDEMTESKIRALASKDLDLDLSKSPYKALVRKVVESFLQ 60
          +D+ ++++I+E V++IL+ S + E+TE K R  AS +L+LDLS+ PYK +VR+ V+SF++
Sbjct: 11 IDNDLKKKIKETVKKILKRSSLLEITEIKAREEASSELNLDLSRDPYKIIVREAVDSFIE 70

Query: 61 K 62
          K
Sbjct: 71 K 71

The following BLAST results are available for this feature:

BLAST of CmaCh16G005360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65155	6.7e-40	51.38	RNA polymerase II transcriptional coactivator KELP OS=Arabidopsis thaliana OX=37...	[more]
O65154	2.9e-11	38.10	RNA polymerase II transcriptional coactivator KIWI OS=Arabidopsis thaliana OX=37...	[more]
Q9FHX8	2.6e-07	47.54	Mediator-associated protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g42060 PE=1 ...	[more]
P53999	2.4e-05	32.56	Activated RNA polymerase II transcriptional coactivator p15 OS=Homo sapiens OX=9...	[more]
Q4R947	2.4e-05	32.56	Activated RNA polymerase II transcriptional coactivator p15 OS=Macaca fascicular...	[more]

BLAST of CmaCh16G005360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10920.1	4.8e-41	51.38	transcriptional coactivator p15 (PC4) family protein (KELP)	[more]
AT4G10920.2	4.8e-41	51.38	transcriptional coactivator p15 (PC4) family protein (KELP)	[more]
AT4G00980.1	1.9e-13	35.36	zinc knuckle (CCHC-type) family protein	[more]
AT5G09250.1	2.1e-12	38.10	ssDNA-binding transcriptional regulator	[more]
AT1G64490.1	1.1e-08	45.90	DEK, chromatin associated protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 64..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..105
None	No IPR available	PANTHER	PTHR13215:SF6	RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP	coord: 4..180
IPR017415	Putative RNA polymerase II transcriptional coactivator KELP	PIRSF	PIRSF038156	RNA_polymII_KELP	coord: 1..181 e-value: 5.5E-54 score: 180.3
IPR014876	DEK, C-terminal	PFAM	PF08766	DEK_C	coord: 8..59 e-value: 8.3E-12 score: 44.8
IPR003173	Transcriptional coactivator p15 (PC4), C-terminal	PFAM	PF02229	PC4	coord: 117..165 e-value: 9.1E-21 score: 73.3
IPR009044	ssDNA-binding transcriptional regulator	GENE3D	2.30.31.10	Transcriptional Coactivator Pc4; Chain A	coord: 103..182 e-value: 2.1E-26 score: 93.3
IPR009044	ssDNA-binding transcriptional regulator	SUPERFAMILY	54447	ssDNA-binding transcriptional regulator domain	coord: 114..176
IPR045125	RNA polymerase II transcriptional coactivator Sub1/Tcp4-like	PANTHER	PTHR13215	RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR	coord: 4..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G005360.1	CmaCh16G005360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060261	positive regulation of transcription initiation from RNA polymerase II promoter
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription regulator complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003713	transcription coactivator activity