CmaCh16G005340 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTTTTTCTTCCTTTGAATTCGCCCTTTTTTCATCTTCTACACGCAATCTCCTCTTCCTTTACCTAATACCCATCTCTTTTGTTTGGTATTACTCTCTGGGTTTTTGATTTCTCTGAGTTAGGGGCTAAGTTCGGAGGTGGGTTTGTTCAGAAATGGAGAGTAACCCGCAATCGCTTAGGCAATTCAGCGACCAGCTTCGACTGCAATCTGGGAATCTTACGAACCTGTCGCTCAACGATTCTATCTGGAGCAATTCGTATGTCTCCAAGAGGCACGAAGAGAGGAGGAATTTCGATGTGCGAAATGGCGGAGAGGTAAATTTAGTGAATAATTTTAAGCCCAAACTGTGTGATTCTGATGTCAATCGGTTCAATGATGGATGGAATAGTTTTAAGCCGAGAGTTGCTTCTGATCTTAATAATTGGAATAACAGTAGCAATCTTAGTTCAACTGGGTATGAAAAGAATGCACTCAATGTGTTTGATAATGGGTGGAATAGTTTGAAGCCACAGGGGTCTGATTTTAATGGCTTCAACGATGGTTGGAAGCTTAATTCTGCAAATATGGGGGTTGATCCAGTGGTTGGAGGAACCCAAAAGGGTATTAACGGAGGGTTTAACCAAGGGATTTTCTCACAAATTGGGAATTTTAACAGTAATGGTTTTGTAAATGTGAAGAACTACAAGAACAGTGGGAAGGTTGAAGAAGAAAATGGAGGAAAGAATGGGAAGAAGAACAGTAACAAGAAGATTAATGGTGAAAATAGCAATGATAATAAGGAAAGTAATAAGAATGGTTTGGACAAGAGGTTCAAAACCCTTCCCCCATCTGAGTCTTTGCCCAGAAATGAAACAATTGGTGGATATATCTTTGTCTGCAACAATGATACAATGCAAGAGAATCTGAAGAGGCAGCTTTTTGGTAAGTTTAATGATCCAACTTGGTTTTTGCTTAGTCTTATGTATCTGTGTTTTGTTGTGTAGGATGTTCTAAGATTTTGTTGTTTGATCAACGCTGTAGGTTTGCCTCCAAGATACAGAGATTCTGTCAGGGCCATAACTCCTGGGCTGCCTATTTTCCTCTACAACTATTCTACCCACCAACTCCATGGAATCTTTGAGGTATGTCCATGTCTTCTCCTTCTTCCATCCAGATATTGTTCACTTTGAGAGCATGAGCTCTCGTGACTTTGCTTTGCTTTTGGTTTCACTAGGGAGATGTATTCCTTATTTTATACCTATGATTATTCTTTAATTAGCCAATGTGGGACTCCTCTTCTAACAATCCTGCCCTCGAACAAAGTACACTATAGAGCCTCCCCTGAGGCCTATGAAGCCCTTGAACAACCTCTCCTTAATCGAGGCTCGACTCCTTTTCGGGAGCCTTTGAACAAAGTACGCCCTTTGTTCTACGCTTTAGTCACTTTTGACTACACCTTTGAGACTCACAACTGTTTTGTTCGAGATTTGAAGATTCTATTGACAGAACTAAGTTAAGGACATGACTCTGATACTATGTTAGGAACAATGGACCTCCTCTTAGTCTGTTTGGTTTTACTTCTTTTAAGTCTATGATCTGTGTTTTCAGGCTGCAAGCTTTGGAGGGGCAAACATTGATCCAACTGCCTGGGAAGACAAGAAAACTCCGGGCGAATCTCGTTTCCCGGCGCAGGTAATGTTTGGATAGAACCTACTCCTTCAATCTTGCACTTCCATAGATCTAAGATGAAACTCAACTGTTTGGAACAGGTCAGAACTGTGACTAGGAAGATATGTGAGCCACTGGAAGAGGACTCTTTCAGACCGATTCTTCACCATTACGACGGTCCCAAGTTTCGTCTCGAACTCAACATTCCAGAGGTAATTGCAGAGCAAACAAAACCATGAATTCTGTAGCTAGCTAACCGAAGACCTCAACAACTCTAATATTGGCTCTGAAAAACTTGCAGGCACTCTCTCTGCTGGATATATTTGAAGAACAATCCTGTTGAACAGCATAACATGCTCCTACACTAGTCAGGCAGGACGCGTAGTACTCGTATGCGAATTAATCGATAGAATTGCCAACAACGACAATGATGATTGAAAGGATCATCATGATCATGTGAGTTTAAGCTATAAGTGTGTTTGGTGTTTGTGTGGTGTTGTCTGATAGAGTAACTGAAGATGGAAAAGGTTCGTAAGTGTAATGTAACAATAAATATGTATTATATGGGGTTTGAGTTATGGATATTGCATGGTTCCATTATAAGAGATGAACGTTTAATTCACGTTATCAGAGTTCAAAATGAATATGAGATACCACACTCGATTTAGTTCATGGATTTGTTAATCTTAATACTAATGTACTCCTAATCATATCTTAAAC ATGCCTTTTTCTTCCTTTGAATTCGCCCTTTTTTCATCTTCTACACGCAATCTCCTCTTCCTTTACCTAATACCCATCTCTTTTGTTTGGTGGGTTTGTTCAGAAATGGAGAGTAACCCGCAATCGCTTAGGCAATTCAGCGACCAGCTTCGACTGCAATCTGGGAATCTTACGAACCTGTCGCTCAACGATTCTATCTGGAGCAATTCGTATGTCTCCAAGAGGCACGAAGAGAGGAGGAATTTCGATGTGCGAAATGGCGGAGAGGTAAATTTAGTGAATAATTTTAAGCCCAAACTGTGTGATTCTGATGTCAATCGGTTCAATGATGGATGGAATAGTTTTAAGCCGAGAGTTGCTTCTGATCTTAATAATTGGAATAACAGTAGCAATCTTAGTTCAACTGGGTATGAAAAGAATGCACTCAATGTGTTTGATAATGGGTGGAATAGTTTGAAGCCACAGGGGTCTGATTTTAATGGCTTCAACGATGGTTGGAAGCTTAATTCTGCAAATATGGGGGTTGATCCAGTGGTTGGAGGAACCCAAAAGGGTATTAACGGAGGGTTTAACCAAGGGATTTTCTCACAAATTGGGAATTTTAACAGTAATGGTTTTGTAAATGTGAAGAACTACAAGAACAGTGGGAAGGTTGAAGAAGAAAATGGAGGAAAGAATGGGAAGAAGAACAGTAACAAGAAGATTAATGGTGAAAATAGCAATGATAATAAGGAAAGTAATAAGAATGGTTTGGACAAGAGGTTCAAAACCCTTCCCCCATCTGAGTCTTTGCCCAGAAATGAAACAATTGGTGGATATATCTTTGTCTGCAACAATGATACAATGCAAGAGAATCTGAAGAGGCAGCTTTTTGGTTTGCCTCCAAGATACAGAGATTCTGTCAGGGCCATAACTCCTGGGCTGCCTATTTTCCTCTACAACTATTCTACCCACCAACTCCATGGAATCTTTGAGGCTGCAAGCTTTGGAGGGGCAAACATTGATCCAACTGCCTGGGAAGACAAGAAAACTCCGGGCGAATCTCGTTTCCCGGCGCAGGTCAGAACTGTGACTAGGAAGATATGTGAGCCACTGGAAGAGGACTCTTTCAGACCGATTCTTCACCATTACGACGGTCCCAAGTTTCGTCTCGAACTCAACATTCCAGAGGCACTCTCTCTGCTGGATATATTTGAAGAACAATCCTGTTGAACAGCATAACATGCTCCTACACTAGTCAGGCAGGACGCGTAGTACTCGTATGCGAATTAATCGATAGAATTGCCAACAACGACAATGATGATTGAAAGGATCATCATGATCATGTGAGTTTAAGCTATAAGTGTGTTTGGTGTTTGTGTGGTGTTGTCTGATAGAGTAACTGAAGATGGAAAAGGTTCGTAAGTGTAATGTAACAATAAATATGTATTATATGGGGTTTGAGTTATGGATATTGCATGGTTCCATTATAAGAGATGAACGTTTAATTCACGTTATCAGAGTTCAAAATGAATATGAGATACCACACTCGATTTAGTTCATGGATTTGTTAATCTTAATACTAATGTACTCCTAATCATATCTTAAAC ATGCCTTTTTCTTCCTTTGAATTCGCCCTTTTTTCATCTTCTACACGCAATCTCCTCTTCCTTTACCTAATACCCATCTCTTTTGTTTGGTGGGTTTGTTCAGAAATGGAGAGTAACCCGCAATCGCTTAGGCAATTCAGCGACCAGCTTCGACTGCAATCTGGGAATCTTACGAACCTGTCGCTCAACGATTCTATCTGGAGCAATTCGTATGTCTCCAAGAGGCACGAAGAGAGGAGGAATTTCGATGTGCGAAATGGCGGAGAGGTAAATTTAGTGAATAATTTTAAGCCCAAACTGTGTGATTCTGATGTCAATCGGTTCAATGATGGATGGAATAGTTTTAAGCCGAGAGTTGCTTCTGATCTTAATAATTGGAATAACAGTAGCAATCTTAGTTCAACTGGGTATGAAAAGAATGCACTCAATGTGTTTGATAATGGGTGGAATAGTTTGAAGCCACAGGGGTCTGATTTTAATGGCTTCAACGATGGTTGGAAGCTTAATTCTGCAAATATGGGGGTTGATCCAGTGGTTGGAGGAACCCAAAAGGGTATTAACGGAGGGTTTAACCAAGGGATTTTCTCACAAATTGGGAATTTTAACAGTAATGGTTTTGTAAATGTGAAGAACTACAAGAACAGTGGGAAGGTTGAAGAAGAAAATGGAGGAAAGAATGGGAAGAAGAACAGTAACAAGAAGATTAATGGTGAAAATAGCAATGATAATAAGGAAAGTAATAAGAATGGTTTGGACAAGAGGTTCAAAACCCTTCCCCCATCTGAGTCTTTGCCCAGAAATGAAACAATTGGTGGATATATCTTTGTCTGCAACAATGATACAATGCAAGAGAATCTGAAGAGGCAGCTTTTTGGTTTGCCTCCAAGATACAGAGATTCTGTCAGGGCCATAACTCCTGGGCTGCCTATTTTCCTCTACAACTATTCTACCCACCAACTCCATGGAATCTTTGAGGCTGCAAGCTTTGGAGGGGCAAACATTGATCCAACTGCCTGGGAAGACAAGAAAACTCCGGGCGAATCTCGTTTCCCGGCGCAGGTCAGAACTGTGACTAGGAAGATATGTGAGCCACTGGAAGAGGACTCTTTCAGACCGATTCTTCACCATTACGACGGTCCCAAGTTTCGTCTCGAACTCAACATTCCAGAGGCACTCTCTCTGCTGGATATATTTGAAGAACAATCCTGTTGA MPFSSFEFALFSSSTRNLLFLYLIPISFVWWVCSEMESNPQSLRQFSDQLRLQSGNLTNLSLNDSIWSNSYVSKRHEERRNFDVRNGGEVNLVNNFKPKLCDSDVNRFNDGWNSFKPRVASDLNNWNNSSNLSSTGYEKNALNVFDNGWNSLKPQGSDFNGFNDGWKLNSANMGVDPVVGGTQKGINGGFNQGIFSQIGNFNSNGFVNVKNYKNSGKVEEENGGKNGKKNSNKKINGENSNDNKESNKNGLDKRFKTLPPSESLPRNETIGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPIFLYNYSTHQLHGIFEAASFGGANIDPTAWEDKKTPGESRFPAQVRTVTRKICEPLEEDSFRPILHHYDGPKFRLELNIPEALSLLDIFEEQSC Homology
BLAST of CmaCh16G005340 vs. ExPASy Swiss-Prot
Match: C6TAQ0 (DCD domain-containing protein NRP-B OS=Glycine max OX=3847 GN=NRP-B PE=2 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 1.7e-107 Identity = 222/372 (59.68%), Postives = 258/372 (69.35%), Query Frame = 0
BLAST of CmaCh16G005340 vs. ExPASy Swiss-Prot
Match: Q5JZR1 (DCD domain-containing protein NRP-A OS=Glycine max OX=3847 GN=NRP-A PE=2 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 5.4e-98 Identity = 217/379 (57.26%), Postives = 255/379 (67.28%), Query Frame = 0
BLAST of CmaCh16G005340 vs. ExPASy Swiss-Prot
Match: Q8RXN8 (DCD domain-containing protein NRP OS=Arabidopsis thaliana OX=3702 GN=NRP PE=1 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 5.4e-98 Identity = 205/368 (55.71%), Postives = 247/368 (67.12%), Query Frame = 0
BLAST of CmaCh16G005340 vs. ExPASy Swiss-Prot
Match: P37707 (B2 protein OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 4.4e-84 Identity = 156/201 (77.61%), Postives = 169/201 (84.08%), Query Frame = 0
BLAST of CmaCh16G005340 vs. TAIR 10
Match: AT5G42050.1 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 359.4 bits (921), Expect = 3.8e-99 Identity = 205/368 (55.71%), Postives = 247/368 (67.12%), Query Frame = 0
BLAST of CmaCh16G005340 vs. TAIR 10
Match: AT3G27090.1 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 268.1 bits (684), Expect = 1.2e-71 Identity = 139/221 (62.90%), Postives = 163/221 (73.76%), Query Frame = 0
BLAST of CmaCh16G005340 vs. TAIR 10
Match: AT5G01660.1 (CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). ) HSP 1 Score: 105.1 bits (261), Expect = 1.3e-22 Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = 0
BLAST of CmaCh16G005340 vs. TAIR 10
Match: AT3G11000.1 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 104.8 bits (260), Expect = 1.7e-22 Identity = 56/130 (43.08%), Postives = 75/130 (57.69%), Query Frame = 0
BLAST of CmaCh16G005340 vs. TAIR 10
Match: AT3G11000.2 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 104.8 bits (260), Expect = 1.7e-22 Identity = 56/130 (43.08%), Postives = 75/130 (57.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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