CmaCh16G005340 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G005340
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionDCD domain-containing protein
LocationCma_Chr16: 2735278 .. 2737648 (+)
RNA-Seq ExpressionCmaCh16G005340
SyntenyCmaCh16G005340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTTTTCTTCCTTTGAATTCGCCCTTTTTTCATCTTCTACACGCAATCTCCTCTTCCTTTACCTAATACCCATCTCTTTTGTTTGGTATTACTCTCTGGGTTTTTGATTTCTCTGAGTTAGGGGCTAAGTTCGGAGGTGGGTTTGTTCAGAAATGGAGAGTAACCCGCAATCGCTTAGGCAATTCAGCGACCAGCTTCGACTGCAATCTGGGAATCTTACGAACCTGTCGCTCAACGATTCTATCTGGAGCAATTCGTATGTCTCCAAGAGGCACGAAGAGAGGAGGAATTTCGATGTGCGAAATGGCGGAGAGGTAAATTTAGTGAATAATTTTAAGCCCAAACTGTGTGATTCTGATGTCAATCGGTTCAATGATGGATGGAATAGTTTTAAGCCGAGAGTTGCTTCTGATCTTAATAATTGGAATAACAGTAGCAATCTTAGTTCAACTGGGTATGAAAAGAATGCACTCAATGTGTTTGATAATGGGTGGAATAGTTTGAAGCCACAGGGGTCTGATTTTAATGGCTTCAACGATGGTTGGAAGCTTAATTCTGCAAATATGGGGGTTGATCCAGTGGTTGGAGGAACCCAAAAGGGTATTAACGGAGGGTTTAACCAAGGGATTTTCTCACAAATTGGGAATTTTAACAGTAATGGTTTTGTAAATGTGAAGAACTACAAGAACAGTGGGAAGGTTGAAGAAGAAAATGGAGGAAAGAATGGGAAGAAGAACAGTAACAAGAAGATTAATGGTGAAAATAGCAATGATAATAAGGAAAGTAATAAGAATGGTTTGGACAAGAGGTTCAAAACCCTTCCCCCATCTGAGTCTTTGCCCAGAAATGAAACAATTGGTGGATATATCTTTGTCTGCAACAATGATACAATGCAAGAGAATCTGAAGAGGCAGCTTTTTGGTAAGTTTAATGATCCAACTTGGTTTTTGCTTAGTCTTATGTATCTGTGTTTTGTTGTGTAGGATGTTCTAAGATTTTGTTGTTTGATCAACGCTGTAGGTTTGCCTCCAAGATACAGAGATTCTGTCAGGGCCATAACTCCTGGGCTGCCTATTTTCCTCTACAACTATTCTACCCACCAACTCCATGGAATCTTTGAGGTATGTCCATGTCTTCTCCTTCTTCCATCCAGATATTGTTCACTTTGAGAGCATGAGCTCTCGTGACTTTGCTTTGCTTTTGGTTTCACTAGGGAGATGTATTCCTTATTTTATACCTATGATTATTCTTTAATTAGCCAATGTGGGACTCCTCTTCTAACAATCCTGCCCTCGAACAAAGTACACTATAGAGCCTCCCCTGAGGCCTATGAAGCCCTTGAACAACCTCTCCTTAATCGAGGCTCGACTCCTTTTCGGGAGCCTTTGAACAAAGTACGCCCTTTGTTCTACGCTTTAGTCACTTTTGACTACACCTTTGAGACTCACAACTGTTTTGTTCGAGATTTGAAGATTCTATTGACAGAACTAAGTTAAGGACATGACTCTGATACTATGTTAGGAACAATGGACCTCCTCTTAGTCTGTTTGGTTTTACTTCTTTTAAGTCTATGATCTGTGTTTTCAGGCTGCAAGCTTTGGAGGGGCAAACATTGATCCAACTGCCTGGGAAGACAAGAAAACTCCGGGCGAATCTCGTTTCCCGGCGCAGGTAATGTTTGGATAGAACCTACTCCTTCAATCTTGCACTTCCATAGATCTAAGATGAAACTCAACTGTTTGGAACAGGTCAGAACTGTGACTAGGAAGATATGTGAGCCACTGGAAGAGGACTCTTTCAGACCGATTCTTCACCATTACGACGGTCCCAAGTTTCGTCTCGAACTCAACATTCCAGAGGTAATTGCAGAGCAAACAAAACCATGAATTCTGTAGCTAGCTAACCGAAGACCTCAACAACTCTAATATTGGCTCTGAAAAACTTGCAGGCACTCTCTCTGCTGGATATATTTGAAGAACAATCCTGTTGAACAGCATAACATGCTCCTACACTAGTCAGGCAGGACGCGTAGTACTCGTATGCGAATTAATCGATAGAATTGCCAACAACGACAATGATGATTGAAAGGATCATCATGATCATGTGAGTTTAAGCTATAAGTGTGTTTGGTGTTTGTGTGGTGTTGTCTGATAGAGTAACTGAAGATGGAAAAGGTTCGTAAGTGTAATGTAACAATAAATATGTATTATATGGGGTTTGAGTTATGGATATTGCATGGTTCCATTATAAGAGATGAACGTTTAATTCACGTTATCAGAGTTCAAAATGAATATGAGATACCACACTCGATTTAGTTCATGGATTTGTTAATCTTAATACTAATGTACTCCTAATCATATCTTAAAC

mRNA sequence

ATGCCTTTTTCTTCCTTTGAATTCGCCCTTTTTTCATCTTCTACACGCAATCTCCTCTTCCTTTACCTAATACCCATCTCTTTTGTTTGGTGGGTTTGTTCAGAAATGGAGAGTAACCCGCAATCGCTTAGGCAATTCAGCGACCAGCTTCGACTGCAATCTGGGAATCTTACGAACCTGTCGCTCAACGATTCTATCTGGAGCAATTCGTATGTCTCCAAGAGGCACGAAGAGAGGAGGAATTTCGATGTGCGAAATGGCGGAGAGGTAAATTTAGTGAATAATTTTAAGCCCAAACTGTGTGATTCTGATGTCAATCGGTTCAATGATGGATGGAATAGTTTTAAGCCGAGAGTTGCTTCTGATCTTAATAATTGGAATAACAGTAGCAATCTTAGTTCAACTGGGTATGAAAAGAATGCACTCAATGTGTTTGATAATGGGTGGAATAGTTTGAAGCCACAGGGGTCTGATTTTAATGGCTTCAACGATGGTTGGAAGCTTAATTCTGCAAATATGGGGGTTGATCCAGTGGTTGGAGGAACCCAAAAGGGTATTAACGGAGGGTTTAACCAAGGGATTTTCTCACAAATTGGGAATTTTAACAGTAATGGTTTTGTAAATGTGAAGAACTACAAGAACAGTGGGAAGGTTGAAGAAGAAAATGGAGGAAAGAATGGGAAGAAGAACAGTAACAAGAAGATTAATGGTGAAAATAGCAATGATAATAAGGAAAGTAATAAGAATGGTTTGGACAAGAGGTTCAAAACCCTTCCCCCATCTGAGTCTTTGCCCAGAAATGAAACAATTGGTGGATATATCTTTGTCTGCAACAATGATACAATGCAAGAGAATCTGAAGAGGCAGCTTTTTGGTTTGCCTCCAAGATACAGAGATTCTGTCAGGGCCATAACTCCTGGGCTGCCTATTTTCCTCTACAACTATTCTACCCACCAACTCCATGGAATCTTTGAGGCTGCAAGCTTTGGAGGGGCAAACATTGATCCAACTGCCTGGGAAGACAAGAAAACTCCGGGCGAATCTCGTTTCCCGGCGCAGGTCAGAACTGTGACTAGGAAGATATGTGAGCCACTGGAAGAGGACTCTTTCAGACCGATTCTTCACCATTACGACGGTCCCAAGTTTCGTCTCGAACTCAACATTCCAGAGGCACTCTCTCTGCTGGATATATTTGAAGAACAATCCTGTTGAACAGCATAACATGCTCCTACACTAGTCAGGCAGGACGCGTAGTACTCGTATGCGAATTAATCGATAGAATTGCCAACAACGACAATGATGATTGAAAGGATCATCATGATCATGTGAGTTTAAGCTATAAGTGTGTTTGGTGTTTGTGTGGTGTTGTCTGATAGAGTAACTGAAGATGGAAAAGGTTCGTAAGTGTAATGTAACAATAAATATGTATTATATGGGGTTTGAGTTATGGATATTGCATGGTTCCATTATAAGAGATGAACGTTTAATTCACGTTATCAGAGTTCAAAATGAATATGAGATACCACACTCGATTTAGTTCATGGATTTGTTAATCTTAATACTAATGTACTCCTAATCATATCTTAAAC

Coding sequence (CDS)

ATGCCTTTTTCTTCCTTTGAATTCGCCCTTTTTTCATCTTCTACACGCAATCTCCTCTTCCTTTACCTAATACCCATCTCTTTTGTTTGGTGGGTTTGTTCAGAAATGGAGAGTAACCCGCAATCGCTTAGGCAATTCAGCGACCAGCTTCGACTGCAATCTGGGAATCTTACGAACCTGTCGCTCAACGATTCTATCTGGAGCAATTCGTATGTCTCCAAGAGGCACGAAGAGAGGAGGAATTTCGATGTGCGAAATGGCGGAGAGGTAAATTTAGTGAATAATTTTAAGCCCAAACTGTGTGATTCTGATGTCAATCGGTTCAATGATGGATGGAATAGTTTTAAGCCGAGAGTTGCTTCTGATCTTAATAATTGGAATAACAGTAGCAATCTTAGTTCAACTGGGTATGAAAAGAATGCACTCAATGTGTTTGATAATGGGTGGAATAGTTTGAAGCCACAGGGGTCTGATTTTAATGGCTTCAACGATGGTTGGAAGCTTAATTCTGCAAATATGGGGGTTGATCCAGTGGTTGGAGGAACCCAAAAGGGTATTAACGGAGGGTTTAACCAAGGGATTTTCTCACAAATTGGGAATTTTAACAGTAATGGTTTTGTAAATGTGAAGAACTACAAGAACAGTGGGAAGGTTGAAGAAGAAAATGGAGGAAAGAATGGGAAGAAGAACAGTAACAAGAAGATTAATGGTGAAAATAGCAATGATAATAAGGAAAGTAATAAGAATGGTTTGGACAAGAGGTTCAAAACCCTTCCCCCATCTGAGTCTTTGCCCAGAAATGAAACAATTGGTGGATATATCTTTGTCTGCAACAATGATACAATGCAAGAGAATCTGAAGAGGCAGCTTTTTGGTTTGCCTCCAAGATACAGAGATTCTGTCAGGGCCATAACTCCTGGGCTGCCTATTTTCCTCTACAACTATTCTACCCACCAACTCCATGGAATCTTTGAGGCTGCAAGCTTTGGAGGGGCAAACATTGATCCAACTGCCTGGGAAGACAAGAAAACTCCGGGCGAATCTCGTTTCCCGGCGCAGGTCAGAACTGTGACTAGGAAGATATGTGAGCCACTGGAAGAGGACTCTTTCAGACCGATTCTTCACCATTACGACGGTCCCAAGTTTCGTCTCGAACTCAACATTCCAGAGGCACTCTCTCTGCTGGATATATTTGAAGAACAATCCTGTTGA

Protein sequence

MPFSSFEFALFSSSTRNLLFLYLIPISFVWWVCSEMESNPQSLRQFSDQLRLQSGNLTNLSLNDSIWSNSYVSKRHEERRNFDVRNGGEVNLVNNFKPKLCDSDVNRFNDGWNSFKPRVASDLNNWNNSSNLSSTGYEKNALNVFDNGWNSLKPQGSDFNGFNDGWKLNSANMGVDPVVGGTQKGINGGFNQGIFSQIGNFNSNGFVNVKNYKNSGKVEEENGGKNGKKNSNKKINGENSNDNKESNKNGLDKRFKTLPPSESLPRNETIGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPIFLYNYSTHQLHGIFEAASFGGANIDPTAWEDKKTPGESRFPAQVRTVTRKICEPLEEDSFRPILHHYDGPKFRLELNIPEALSLLDIFEEQSC
Homology
BLAST of CmaCh16G005340 vs. ExPASy Swiss-Prot
Match: C6TAQ0 (DCD domain-containing protein NRP-B OS=Glycine max OX=3847 GN=NRP-B PE=2 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 1.7e-107
Identity = 222/372 (59.68%), Postives = 258/372 (69.35%), Query Frame = 0

Query: 36  MESNPQSLRQFSDQLRLQSGNLTNLSLNDSIWSNSYVSKRHEERRNFDVRNGGEVNLVNN 95
           ME+N QS  QFSDQLRLQ+ NL NLSLNDSIWSN+Y+SKR +ER NFD++ GGE+N   +
Sbjct: 1   MENNNQSFWQFSDQLRLQASNLANLSLNDSIWSNNYISKRRDERINFDIKVGGEINSFKS 60

Query: 96  FKPKLCDSDVNRFNDGWNSFKPRVASDLNNWNNSSNLSSTGYEKNALNVFDNGWNSLKPQ 155
            K   CD     +ND  N     +A   NN NN++N+                       
Sbjct: 61  -KDPACD-----YNDNVNG--SLLAMPYNN-NNNNNI----------------------- 120

Query: 156 GSDFNGFNDGWKLNSANMGVDPVVGGTQKGINGGFNQGIFSQ--IGNFNSNGFVNVKNYK 215
                                 ++G    G+NGGFN+GI+S+    N N+N  +N+    
Sbjct: 121 ----------------------ILGFGGVGLNGGFNKGIYSKPAFANLNNNINLNINPKG 180

Query: 216 NSGKVEEE--NGGKNGKKNS--NKKINGENSNDNKESNKNGLDKRFKTLPPSESLPRNET 275
           + GKVE+E  +  K+ KKN+  NKK    N+NDN + +K   DKRFKTLPPSESLPR+ET
Sbjct: 181 HKGKVEDELFHPSKSSKKNNNLNKKHGDNNNNDNNKDSKAAGDKRFKTLPPSESLPRDET 240

Query: 276 IGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPIFLYNYSTHQLHGIFEAASF 335
           IGGYIFVCNNDTM ENLKRQLFGLPPRYRDSVRAITPGLP+FLYNYSTHQLHGIFEAASF
Sbjct: 241 IGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASF 300

Query: 336 GGANIDPTAWEDKKTPGESRFPAQVRTVTRKICEPLEEDSFRPILHHYDGPKFRLELNIP 395
           GG NIDP+AWEDKK PGESRFPAQVR +TRK CEPLEEDSFRPILHHYDGPKFRLELN+P
Sbjct: 301 GGTNIDPSAWEDKKCPGESRFPAQVRVITRKTCEPLEEDSFRPILHHYDGPKFRLELNVP 318

Query: 396 EALSLLDIFEEQ 402
           EALSLLDIF EQ
Sbjct: 361 EALSLLDIFAEQ 318

BLAST of CmaCh16G005340 vs. ExPASy Swiss-Prot
Match: Q5JZR1 (DCD domain-containing protein NRP-A OS=Glycine max OX=3847 GN=NRP-A PE=2 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 5.4e-98
Identity = 217/379 (57.26%), Postives = 255/379 (67.28%), Query Frame = 0

Query: 39  NPQSLRQFSDQLRLQSGNLTNLSLND-SIWSNSYVSKRHEERRNFDVRNGGEVNLVNNFK 98
           N     +FSDQLRL+SG L NLSLND SIWSNSY SKR ++RRNFDV+ G + N  NN  
Sbjct: 3   NNNDFWKFSDQLRLESG-LANLSLNDYSIWSNSYSSKRPDQRRNFDVK-GSDFN-NNNNS 62

Query: 99  PKLCDSDVNRFNDGW---NSFKPRVASDLNNWNNSSNLSSTGYEKNA-----LNVFDNGW 158
            K  D D   FNDGW   NS  P  +   NN NN+  L   G+ K        N   + +
Sbjct: 63  SKAFDDD---FNDGWKITNSNGPLFSMPHNNNNNT--LEVGGFNKGGGIYSNTNTTISSY 122

Query: 159 NSLKPQGSDFNGFNDGWKLNSANMGVDPVVGGTQKGINGGFNQGIFSQIGNFNSNGFVNV 218
           +      + F GFN G   N+ +    P +      ++            N N N   N+
Sbjct: 123 HPNNLNNNAFGGFNKGIYSNTTS---SPYLNNNHHHLDDN---------NNLNRN---NL 182

Query: 219 KNYKNSGKVEEE------NGGKNGKKNSNKKINGENSNDNKESNKNGLDKRFKTLPPSES 278
           K YK   K E++         KN   N+N K +G+N+N+N +  K G +K+FKTLPPSES
Sbjct: 183 KGYKTYFKGEDQFHTPKSAKKKNTTNNTNNKKHGDNTNNN-DGTKTGAEKKFKTLPPSES 242

Query: 279 LPRNETIGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPIFLYNYSTHQLHGI 338
           LP+NETIGGYIFVCNNDTM ENL+RQLFGLPPRYRDSVR ITPGLPIFLYNYSTHQLHGI
Sbjct: 243 LPKNETIGGYIFVCNNDTMAENLQRQLFGLPPRYRDSVRTITPGLPIFLYNYSTHQLHGI 302

Query: 339 FEAASFGGANIDPTAWEDKKTPGESRFPAQVRTVTRKICEPLEEDSFRPILHHYDGPKFR 398
           FEAASFGG+NIDPTAWEDKK PGESRFPAQV+ +TRK+CEPLEEDSFRPILHHYDGPKFR
Sbjct: 303 FEAASFGGSNIDPTAWEDKKCPGESRFPAQVQVITRKVCEPLEEDSFRPILHHYDGPKFR 357

Query: 399 LELNIPEALSLLDIFEEQS 403
           LEL++PEALSLLDIF  Q+
Sbjct: 363 LELSVPEALSLLDIFANQN 357

BLAST of CmaCh16G005340 vs. ExPASy Swiss-Prot
Match: Q8RXN8 (DCD domain-containing protein NRP OS=Arabidopsis thaliana OX=3702 GN=NRP PE=1 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 5.4e-98
Identity = 205/368 (55.71%), Postives = 247/368 (67.12%), Query Frame = 0

Query: 38  SNPQSLRQFSDQLRLQSGNLTNLSLNDSIWSNSYVSKRHEERRNFDV--RNGGEVNLVNN 97
           +N QS  QFSDQLR+Q+ NL NLSLNDSIWS + V K   ERRN D+        N ++ 
Sbjct: 6   NNQQSFWQFSDQLRVQTPNLANLSLNDSIWSTNSVFK---ERRNLDIAATTDKNNNQIDY 65

Query: 98  FKPKLCDSDVNRFNDGWNSFKPRVASDLNNWNNSSNLSSTGYEKNALNVFDNGWNSLKPQ 157
           ++ K    ++N                 +NWN  S+ S+         V       L P 
Sbjct: 66  YQKKTTSDNIN-----------------SNWNWKSSGSNNDMGLGFGPVGSKSTVDLNPI 125

Query: 158 GSDFNGFNDGWKLNSANMGVDPVVGGTQKGINGGFNQGIFSQIGNFNSNGFVNVK-NYKN 217
               + FND WK NS N+ V+         +NG FN+G+++ +  +  N  VN+K N KN
Sbjct: 126 DKFNSPFNDTWKFNSVNVNVNGY--SPSSAVNGDFNKGVYTSMKKYGYN--VNLKNNNKN 185

Query: 218 SGKVEEENGGKNGKKNSNKKINGENSNDNKESNKNGLDKRFKTLPPSESLPRNETIGGYI 277
            G  E+    K GKKN   + N  N   N++   NGLDKRFKTLPP+E+LPRNETIGGYI
Sbjct: 186 KGIDEDHQIQKGGKKNRKNQQNNNNQR-NEDDKNNGLDKRFKTLPPAEALPRNETIGGYI 245

Query: 278 FVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPIFLYNYSTHQLHGIFEAASFGGANI 337
           FVCNNDTM+ENLKRQLFGLPPRYRDSVRAITPGLP+FLYNYSTHQLHGI+EAASFGG NI
Sbjct: 246 FVCNNDTMEENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIYEAASFGGTNI 305

Query: 338 DPTAWEDKKTPGESRFPAQVRTVTRKICEPLEEDSFRPILHHYDGPKFRLELNIPEALSL 397
           +  A+EDKK PGESRFPAQVR +TRK+C PLEEDSFRPILHHYDGPKFRLEL++PE LSL
Sbjct: 306 ELNAFEDKKCPGESRFPAQVRAITRKVCLPLEEDSFRPILHHYDGPKFRLELSVPEVLSL 348

Query: 398 LDIFEEQS 403
           LDIF +Q+
Sbjct: 366 LDIFADQN 348

BLAST of CmaCh16G005340 vs. ExPASy Swiss-Prot
Match: P37707 (B2 protein OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 4.4e-84
Identity = 156/201 (77.61%), Postives = 169/201 (84.08%), Query Frame = 0

Query: 200 NFNSNGFVNVKNYKNSGKVEEENGGKNGKKNSNKKINGENSNDNKESNKNGLDKRFKTLP 259
           NFN N     +  +  GK  ++N      KN N   N E+ N N   NKNG++KRFKTLP
Sbjct: 10  NFNFNQPQQPQQQQFHGKSVKKN------KNKNNNNNSESGNKNGGENKNGVEKRFKTLP 69

Query: 260 PSESLPRNETIGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPIFLYNYSTHQ 319
           P+ESLPRNET+GGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLP+FLYNYSTHQ
Sbjct: 70  PAESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQ 129

Query: 320 LHGIFEAASFGGANIDPTAWEDKKTPGESRFPAQVRTVTRKICEPLEEDSFRPILHHYDG 379
           LHG+FEAASFGG NIDPTAWEDKK  GESRFPAQVR +TRKICEPLEEDSFRPILHHYDG
Sbjct: 130 LHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFRPILHHYDG 189

Query: 380 PKFRLELNIPEALSLLDIFEE 401
           PKFRLELNIPEA+SLLDIFEE
Sbjct: 190 PKFRLELNIPEAISLLDIFEE 204

BLAST of CmaCh16G005340 vs. TAIR 10
Match: AT5G42050.1 (DCD (Development and Cell Death) domain protein )

HSP 1 Score: 359.4 bits (921), Expect = 3.8e-99
Identity = 205/368 (55.71%), Postives = 247/368 (67.12%), Query Frame = 0

Query: 38  SNPQSLRQFSDQLRLQSGNLTNLSLNDSIWSNSYVSKRHEERRNFDV--RNGGEVNLVNN 97
           +N QS  QFSDQLR+Q+ NL NLSLNDSIWS + V K   ERRN D+        N ++ 
Sbjct: 6   NNQQSFWQFSDQLRVQTPNLANLSLNDSIWSTNSVFK---ERRNLDIAATTDKNNNQIDY 65

Query: 98  FKPKLCDSDVNRFNDGWNSFKPRVASDLNNWNNSSNLSSTGYEKNALNVFDNGWNSLKPQ 157
           ++ K    ++N                 +NWN  S+ S+         V       L P 
Sbjct: 66  YQKKTTSDNIN-----------------SNWNWKSSGSNNDMGLGFGPVGSKSTVDLNPI 125

Query: 158 GSDFNGFNDGWKLNSANMGVDPVVGGTQKGINGGFNQGIFSQIGNFNSNGFVNVK-NYKN 217
               + FND WK NS N+ V+         +NG FN+G+++ +  +  N  VN+K N KN
Sbjct: 126 DKFNSPFNDTWKFNSVNVNVNGY--SPSSAVNGDFNKGVYTSMKKYGYN--VNLKNNNKN 185

Query: 218 SGKVEEENGGKNGKKNSNKKINGENSNDNKESNKNGLDKRFKTLPPSESLPRNETIGGYI 277
            G  E+    K GKKN   + N  N   N++   NGLDKRFKTLPP+E+LPRNETIGGYI
Sbjct: 186 KGIDEDHQIQKGGKKNRKNQQNNNNQR-NEDDKNNGLDKRFKTLPPAEALPRNETIGGYI 245

Query: 278 FVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPIFLYNYSTHQLHGIFEAASFGGANI 337
           FVCNNDTM+ENLKRQLFGLPPRYRDSVRAITPGLP+FLYNYSTHQLHGI+EAASFGG NI
Sbjct: 246 FVCNNDTMEENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIYEAASFGGTNI 305

Query: 338 DPTAWEDKKTPGESRFPAQVRTVTRKICEPLEEDSFRPILHHYDGPKFRLELNIPEALSL 397
           +  A+EDKK PGESRFPAQVR +TRK+C PLEEDSFRPILHHYDGPKFRLEL++PE LSL
Sbjct: 306 ELNAFEDKKCPGESRFPAQVRAITRKVCLPLEEDSFRPILHHYDGPKFRLELSVPEVLSL 348

Query: 398 LDIFEEQS 403
           LDIF +Q+
Sbjct: 366 LDIFADQN 348

BLAST of CmaCh16G005340 vs. TAIR 10
Match: AT3G27090.1 (DCD (Development and Cell Death) domain protein )

HSP 1 Score: 268.1 bits (684), Expect = 1.2e-71
Identity = 139/221 (62.90%), Postives = 163/221 (73.76%), Query Frame = 0

Query: 186 INGGFNQGIFS----QIGNFNSNGFVNVKNYKNSG--KVEEENGGKNGKKNSNKKINGEN 245
           ++G F + I      Q   +N N      ++K+ G  KV + NG     K  +   +  N
Sbjct: 73  LDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSGGNMKVNKYNGNVVANKEMSNNKHNNN 132

Query: 246 SNDNKESNKNGLDKRFKTLPPSESLPRNETIGGYIFVCNNDTMQENLKRQLFGLPPRYRD 305
            NDN   N   +DKRFKTLP SE+LPRNE +GGYIFVCNNDTMQE++KR LFGLPPRYRD
Sbjct: 133 CNDNGNMNL-AVDKRFKTLPASETLPRNEVLGGYIFVCNNDTMQEDMKRHLFGLPPRYRD 192

Query: 306 SVRAITPGLPIFLYNYSTHQLHGIFEAASFGGANIDPTAWEDKKTPGESRFPAQVRTVTR 365
           SVRAITPGLP+FLYNY+THQLHGIFEA +FGG NID TAWEDKK  GESRFPAQVR   R
Sbjct: 193 SVRAITPGLPLFLYNYTTHQLHGIFEATTFGGTNIDATAWEDKKCKGESRFPAQVRIRVR 252

Query: 366 KICEPLEEDSFRPILHHYDGPKFRLELNIPEALSLLDIFEE 401
           KIC+ LEEDSFRP+LHHYDGPKFRLEL++PE L LLD+ E+
Sbjct: 253 KICKALEEDSFRPVLHHYDGPKFRLELSVPETLDLLDLCEQ 292

BLAST of CmaCh16G005340 vs. TAIR 10
Match: AT5G01660.1 (CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). )

HSP 1 Score: 105.1 bits (261), Expect = 1.3e-22
Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = 0

Query: 270 IGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPIFLYNYSTHQLHGIFEAASF 329
           +GG +F C  +T++E + +QLFGLP  +   V+ I  GLP+FL+NYS   LHGIFEAA  
Sbjct: 18  LGGVVFGCTKNTIKECMSKQLFGLPSNHYPYVQKIDIGLPLFLFNYSDRTLHGIFEAAGC 77

Query: 330 GGANIDPTAWEDKKTPGESRFPAQVRTVTRKICEPLEEDSFRPIL--HHYDGPKFRLELN 388
           G  N DP  W    +   S +PAQV    R  CEPL E+ F+P +  ++Y    F  EL+
Sbjct: 78  GQLNFDPYGWTSDGSERTS-YPAQVPISVRLQCEPLSEEKFKPAIADNYYSSHHFWFELD 136

BLAST of CmaCh16G005340 vs. TAIR 10
Match: AT3G11000.1 (DCD (Development and Cell Death) domain protein )

HSP 1 Score: 104.8 bits (260), Expect = 1.7e-22
Identity = 56/130 (43.08%), Postives = 75/130 (57.69%), Query Frame = 0

Query: 272 GYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPIFLYNYSTHQLHGIFEAASFGG 331
           G IF C   T++E   + LFGLP  +   ++ I PGL +FL+NYS   LHGIFEAAS G 
Sbjct: 13  GVIFGCKFSTIKECYAKNLFGLPAPHMAYIKNIDPGLTLFLFNYSDRTLHGIFEAASEGK 72

Query: 332 ANIDPTAWEDKKTPGESRFPAQVRTVTRKICEPLEEDSFRPIL--HHYDGPKFRLELNIP 391
            NID  AW    T   S +PAQV+   R  CEPL E+ F P++  ++ D   F  EL+  
Sbjct: 73  LNIDSKAWSPNGT-DPSPYPAQVKVRVRVRCEPLPEEKFSPVIVENYNDDKMFWFELDRG 132

Query: 392 EALSLLDIFE 400
           +   LL +F+
Sbjct: 133 QTNKLLRLFK 141

BLAST of CmaCh16G005340 vs. TAIR 10
Match: AT3G11000.2 (DCD (Development and Cell Death) domain protein )

HSP 1 Score: 104.8 bits (260), Expect = 1.7e-22
Identity = 56/130 (43.08%), Postives = 75/130 (57.69%), Query Frame = 0

Query: 272 GYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPIFLYNYSTHQLHGIFEAASFGG 331
           G IF C   T++E   + LFGLP  +   ++ I PGL +FL+NYS   LHGIFEAAS G 
Sbjct: 132 GVIFGCKFSTIKECYAKNLFGLPAPHMAYIKNIDPGLTLFLFNYSDRTLHGIFEAASEGK 191

Query: 332 ANIDPTAWEDKKTPGESRFPAQVRTVTRKICEPLEEDSFRPIL--HHYDGPKFRLELNIP 391
            NID  AW    T   S +PAQV+   R  CEPL E+ F P++  ++ D   F  EL+  
Sbjct: 192 LNIDSKAWSPNGT-DPSPYPAQVKVRVRVRCEPLPEEKFSPVIVENYNDDKMFWFELDRG 251

Query: 392 EALSLLDIFE 400
           +   LL +F+
Sbjct: 252 QTNKLLRLFK 260

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
C6TAQ01.7e-10759.68DCD domain-containing protein NRP-B OS=Glycine max OX=3847 GN=NRP-B PE=2 SV=1[more]
Q5JZR15.4e-9857.26DCD domain-containing protein NRP-A OS=Glycine max OX=3847 GN=NRP-A PE=2 SV=1[more]
Q8RXN85.4e-9855.71DCD domain-containing protein NRP OS=Arabidopsis thaliana OX=3702 GN=NRP PE=1 SV... [more]
P377074.4e-8477.61B2 protein OS=Daucus carota OX=4039 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT5G42050.13.8e-9955.71DCD (Development and Cell Death) domain protein [more]
AT3G27090.11.2e-7162.90DCD (Development and Cell Death) domain protein [more]
AT5G01660.11.3e-2243.33CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IP... [more]
AT3G11000.11.7e-2243.08DCD (Development and Cell Death) domain protein [more]
AT3G11000.21.7e-2243.08DCD (Development and Cell Death) domain protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013989Development/cell death domainSMARTSM00767dcdcoord: 268..400
e-value: 2.4E-83
score: 292.9
IPR013989Development/cell death domainPFAMPF10539Dev_Cell_Deathcoord: 271..398
e-value: 8.0E-40
score: 135.6
IPR013989Development/cell death domainPROSITEPS51222DCDcoord: 268..400
score: 55.905289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..264
NoneNo IPR availablePANTHERPTHR46034:SF20DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEINcoord: 42..402
IPR044832DCD domain-containing protein NRP-likePANTHERPTHR46034FAMILY NOT NAMEDcoord: 42..402

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G005340.1CmaCh16G005340.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034976 response to endoplasmic reticulum stress