CmaCh16G005330 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G005330
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Auxin response factor
Location	Cma_Chr16: 2722122 .. 2726386 (-)
RNA-Seq Expression	CmaCh16G005330
Synteny	CmaCh16G005330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTGATATCATGTTTATTCTCCTCACAACAAAATAATGGATTGCGACTCTGTTTATTAGAAAATAGAAAGAAAATGAAAAAGGGAAGTAGAGAGAGAAAGAGAGGAGAGAGAAGAGGGAGCTGAAGCAGGAAGGCACCGGTATAATAGGAAGGGGGGGAAGGTTTTTTTGGCATTCTCTGTAACGGCGTTTTTTCCCGGATTCCAAAGAGATAAAAACAAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAACAAGGCGAGAGTAGAAGAGAAGCAAAAGCGGGTTTTAGAGCTCTTCCAAAAACGGTTCTGTAACGGCAGCCAAAGGCGGGGGAAGGGGCGGCTACTGCTGGAGCGTTACAGTTTTCATCATCATCTTCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTGCTGGGAAATCTATAAAATCGCCATTAACCTTCATTTCTGGTTATAATTAGAGGCGGGTTTATGCGTATTTTGCTATTAGCAGCGGCGGCGGCGGCGGCTCTGTTTTCGGATTACCTTCGTTTTCTGTTGTTGACTTGTGGGGGACGCGGGAAGGTTCAATAATGGCTAATCGGGGAGGAGGGTCGTCTCAAGGTAACTTCAAATGGGTCGTTCCTGTTTCCTCTTCTTAAACCTTCTTCTTCTCTGAAAATTTCTGGTTTCTCAGGTGGGGGAGGAGATGGACTGTACACCGAGCTTTGGAAGGCATCGGCTGGGCCTCTTGTGGAAGTTCCTCGAGTTAATGACAAGGTTTTCTACTTCCCTCAAGGCCACATGGAACAGGTAACTTTTCAGATCGAGCTCTGTTTCTGGATTTTTAGGGTTGTTTTTGTTATTTCCTTTCTGGGTTTGATTGAAAAATGTTGGTTCATATAGTTGGAGGCATCTCCAAATCATGAACTGAATCAGAAACAACCCTTGTTTAAACTTTCCTCCAAAATTCTCTGCCGTGTTGTTGATGTTCGCCTGCTGGTAACTTCTCTTCTTAATCCTCTGTTCTTGTCTGTTTCTTTGTTTGATTAGGCCTCTAGATATAAGCCACTTTGTTTGATCTTGTCTTGAAATTTTAGGCTGAGCAGGAAACAGATGAGGTTTATGCACAGATAACTTTAATGCCTGATTCAAATGTAAGAACTGTTTGTTAGTTTTGGACAAACAAACGTGAGTTTTAGACCCTTTTTACTAATATTGGATTGCTGTTCAGCAAGAGGAACCTACAAACCCTGATCCTTCGCCACCAGAGTGTCGAAAACCGAAAGTCCATTCATTTTGCAAGGTCTTGACTGCTTCTGATACTAGCACCCATGGAGGATTCTCCGTGCTTCGTAAACACGCCACGGAATGCCTGCCTCCATTGGTAATTCTCCTTCACCGAGTTGTCTTTTCCTTTTTGTAAACACGCCACGGAATATCAATATGTTTTCTGATTTTCTCGTGTGAATGTTCCTCAGGATATGACCCAACAGACCCCAACTCAAGAACTTGTAGCCAAAGATCTTCATGGTTACGAGTGGCGATTCAAGCATATCTTTAGGGGTGAGTCCTCTCTTCATATGTTTATGAACAGTTATAGCTCGAGCATATAGCCAATTTCAATTCAATTTGTGTCCATTTTTCGATTTATAATAGAAAATCTTCGCTATGATGGACTACAGGTCAACCACGAAGGCATTTGCTAACGACGGGATGGAGCACGTTTGTTACTTCGAAAAGACTAGTTGCTGGTGATTCTTTTGTGTTCTTGAGGTATATCTCGAGTTTCCTTTTGTAGATGTTCGTCGGTAGGGGGAGGTTATGATTTATCTGTTAACTCATTATGAAATGGTTTCTTAGAGGGGAAAATGGGGAATTACGAGTCGGAGTGAGGCGTCTTGCTCGCCAACAAACCAGCATGCCTTCATCTGTGATTTCAAGTGACAGCATGCACTTAGGAGTGCTTGCTACTGCCTCTCACGCCGTGTCAACTCTAACTCGCTTTGTTGTCTATTATAAGCCAAGGTGATATGAATTTTTTTTTTCTATGTACTTCCGTGTTATTCGATCAAGATGTTCATGCTGTCTGTTTGTTTCTATTTCGTGTCGGTTGATACCAGGGCGAGCCAGTTTATCGTCAGCTTGAATAAGTACATCGAAGCAATGAACAGGAAGTTCTTAGTTGGGATGAGATTCAAGATGAGATTCGAGGGAGAGGAGTCTCCCGAGAGAAGGTAGTTTGAAAATAACATGCTGCGATGCGTTTTCGCCTTCTTTTTTGCATGAGCGTTATCACTTACTCTTGTTTTACTCGTTCTATACGACCAGGTTTTCGGGTACCATTGTCGGAGTTGACGACATATCTCCTCACTGGCCCAATTCGAAATGGCAATCGCTAAGAGTAAAGTCTTCATCTGGAATCCCGAGTCTTACTCCCACATCGTTCCTTTAACAAACCCGATTTCTGATTGTATTATCTCTTTCTTTCCAGATTCAATGGGATGAACTTGCATCTATTCCTCGACCTGATAGAGTTTCGCCATGGGAGATTGAACCTTTTGTGGCGCCTACGTCCCCGAGCATTCCGCAATCGGTTTCGGTAAAGAATAAAAGGCTTCGGCCTCCACTTGACATTCCAGGTATTGCTGAGAGTTACCTATTGCTTCTTTTGGCTGTGGGAGGAGTTAGAAATGAGTTATTGGCTAATCGTGACGTTTTTATTCAGATTCTGATAATTCAACCGTAACAACTCTACGACATCCAGGATCAACTCAATCACATGACGATAGGGCACAGCTTAGCATTGCTGCGTCTGAAATGAAACGATTTGAAAATCACGCAACGTGGAATTACAAGCAAACTGATGTTAGCAGCATTGGGAATTCTGTATCAAGGACCCCAAAGGAGGGCTCTTGGTTAGCTTCCCCAAATGGGAGTGTTTCGCAGCATCGATTACAGAATTTGACAGATGACCGAAACAGCAGTTATGTTTGGTCAACCGTCTTCTCGGGAGCGCCAGTAGCACAGTCGACATGTCGAGCTCCACACCCATCTAATCCAAAGAGCAGCGACCAAGTTAACGATCTTGGGGAAAAGGGGAGGAAAACTGAGGTGGCTCCAAGCTGTCGCTTGTTCGGGATCGATATCATCGGTCATTCTAAGAGCCCAGTTCCACCCGAAATGGCTGCTGATCAACCGATTAGCGCACCAAATGAAATCACTGATGCAGAGCAGAACTCAGACCAGCCAAAGGCTTCTAAAGAAAGAAAATTAGGACTTTTACAAGTACCTCCTAAAGAGATCCAGCACAAGCAGAGCAGCTCGACCAACAGCCGAAGTCGTACCAAGGTGAGACTATACGAGATCTATATACAGATTACTCATGTTTAGAACTTTTTGGGTGTGCCCTAATTTATCGACTTGTTGGTCGTCGATACATTGAAGGTTCAAATGCAGGGGATGGCTGTCGGACGTGCTGTGGACCTTACGATGTTGGAAGGGTATGGCCAACTCATTGACGAACTGGAAAAGATGTTCGATATCAAGGGAGAACTTCACCCACGTGATAAGTGGGAGATTGTCTTCACAGACGACGAAGGAGATACAATGCTCATGGGCGATTACCCGTGGCAGTAAGTCATACACCACCAACCACATTGTTTGACTCAACGATATCGGTTGCGTAACGCTCGTATGGTTTTACACAATCTTGCAGGGAATTCTGTAACATGGTGAGAAGAATATATATATGGTCGAGTCAGGATGTGAAGATGATGAATTCGGTTAGCAAACTCACAATGTCTGCAATGGAATGCGATGGAACGGTAATAACCTCGGAGTCGGCCGACAGCTGAAGCTCGAAGTACATCGCTTCGGAAACTTAAATAATCTTTTGGGTTAGTCTTTTGTTGTTTGTCTATGAAAAAAAAAGAACAAAAAAACGAAGAAAAACACAGAACAAAGAAACATGAGAGAATCTTTGTCTCATTTCCAAGAAGCTTTTGGAGGAGAGGTAAAGATTAGAATTTGGAAAACTTTGTTGAAATTAATGATGAGTGGGTCAGAAAATGTAGAGCTTATGCTTCTTCTATTTATGTAAATATAATACCCATTTTGTCAAATCTTAAACTTTTATTCTCCGTGACGAGTCGGTTGGTTCGGATTGAATCTTAATCAAATCCGACTCTAAATCAATGACCCATAAGTTCAAAATGGGCAACATTTAAAAGGTATCGAACTTTTTAAAATAGGCTTGGTTTCGAATTTACATGGAATGAACGAC

mRNA sequence

AATTGATATCATGTTTATTCTCCTCACAACAAAATAATGGATTGCGACTCTGTTTATTAGAAAATAGAAAGAAAATGAAAAAGGGAAGTAGAGAGAGAAAGAGAGGAGAGAGAAGAGGGAGCTGAAGCAGGAAGGCACCGGTATAATAGGAAGGGGGGGAAGGTTTTTTTGGCATTCTCTGTAACGGCGTTTTTTCCCGGATTCCAAAGAGATAAAAACAAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAACAAGGCGAGAGTAGAAGAGAAGCAAAAGCGGGTTTTAGAGCTCTTCCAAAAACGGTTCTGTAACGGCAGCCAAAGGCGGGGGAAGGGGCGGCTACTGCTGGAGCGTTACAGTTTTCATCATCATCTTCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTGCTGGGAAATCTATAAAATCGCCATTAACCTTCATTTCTGGTTATAATTAGAGGCGGGTTTATGCGTATTTTGCTATTAGCAGCGGCGGCGGCGGCGGCTCTGTTTTCGGATTACCTTCGTTTTCTGTTGTTGACTTGTGGGGGACGCGGGAAGGTTCAATAATGGCTAATCGGGGAGGAGGGTCGTCTCAAGGTGGGGGAGGAGATGGACTGTACACCGAGCTTTGGAAGGCATCGGCTGGGCCTCTTGTGGAAGTTCCTCGAGTTAATGACAAGGTTTTCTACTTCCCTCAAGGCCACATGGAACAGTTGGAGGCATCTCCAAATCATGAACTGAATCAGAAACAACCCTTGTTTAAACTTTCCTCCAAAATTCTCTGCCGTGTTGTTGATGTTCGCCTGCTGGCTGAGCAGGAAACAGATGAGGTTTATGCACAGATAACTTTAATGCCTGATTCAAATCAAGAGGAACCTACAAACCCTGATCCTTCGCCACCAGAGTGTCGAAAACCGAAAGTCCATTCATTTTGCAAGGTCTTGACTGCTTCTGATACTAGCACCCATGGAGGATTCTCCGTGCTTCGTAAACACGCCACGGAATGCCTGCCTCCATTGGATATGACCCAACAGACCCCAACTCAAGAACTTGTAGCCAAAGATCTTCATGGTTACGAGTGGCGATTCAAGCATATCTTTAGGGGTCAACCACGAAGGCATTTGCTAACGACGGGATGGAGCACGTTTGTTACTTCGAAAAGACTAGTTGCTGGTGATTCTTTTGTGTTCTTGAGAGGGGAAAATGGGGAATTACGAGTCGGAGTGAGGCGTCTTGCTCGCCAACAAACCAGCATGCCTTCATCTGTGATTTCAAGTGACAGCATGCACTTAGGAGTGCTTGCTACTGCCTCTCACGCCGTGTCAACTCTAACTCGCTTTGTTGTCTATTATAAGCCAAGGGCGAGCCAGTTTATCGTCAGCTTGAATAAGTACATCGAAGCAATGAACAGGAAGTTCTTAGTTGGGATGAGATTCAAGATGAGATTCGAGGGAGAGGAGTCTCCCGAGAGAAGGTTTTCGGGTACCATTGTCGGAGTTGACGACATATCTCCTCACTGGCCCAATTCGAAATGGCAATCGCTAAGAATTCAATGGGATGAACTTGCATCTATTCCTCGACCTGATAGAGTTTCGCCATGGGAGATTGAACCTTTTGTGGCGCCTACGTCCCCGAGCATTCCGCAATCGGTTTCGGTAAAGAATAAAAGGCTTCGGCCTCCACTTGACATTCCAGATTCTGATAATTCAACCGTAACAACTCTACGACATCCAGGATCAACTCAATCACATGACGATAGGGCACAGCTTAGCATTGCTGCGTCTGAAATGAAACGATTTGAAAATCACGCAACGTGGAATTACAAGCAAACTGATGTTAGCAGCATTGGGAATTCTGTATCAAGGACCCCAAAGGAGGGCTCTTGGTTAGCTTCCCCAAATGGGAGTGTTTCGCAGCATCGATTACAGAATTTGACAGATGACCGAAACAGCAGTTATGTTTGGTCAACCGTCTTCTCGGGAGCGCCAGTAGCACAGTCGACATGTCGAGCTCCACACCCATCTAATCCAAAGAGCAGCGACCAAGTTAACGATCTTGGGGAAAAGGGGAGGAAAACTGAGGTGGCTCCAAGCTGTCGCTTGTTCGGGATCGATATCATCGGTCATTCTAAGAGCCCAGTTCCACCCGAAATGGCTGCTGATCAACCGATTAGCGCACCAAATGAAATCACTGATGCAGAGCAGAACTCAGACCAGCCAAAGGCTTCTAAAGAAAGAAAATTAGGACTTTTACAAGTACCTCCTAAAGAGATCCAGCACAAGCAGAGCAGCTCGACCAACAGCCGAAGTCGTACCAAGGTTCAAATGCAGGGGATGGCTGTCGGACGTGCTGTGGACCTTACGATGTTGGAAGGGTATGGCCAACTCATTGACGAACTGGAAAAGATGTTCGATATCAAGGGAGAACTTCACCCACGTGATAAGTGGGAGATTGTCTTCACAGACGACGAAGGAGATACAATGCTCATGGGCGATTACCCGTGGCAGGAATTCTGTAACATGGTGAGAAGAATATATATATGGTCGAGTCAGGATGTGAAGATGATGAATTCGGTTAGCAAACTCACAATGTCTGCAATGGAATGCGATGGAACGGTAATAACCTCGGAGTCGGCCGACAGCTGAAGCTCGAAGTACATCGCTTCGGAAACTTAAATAATCTTTTGGGTTAGTCTTTTGTTGTTTGTCTATGAAAAAAAAAGAACAAAAAAACGAAGAAAAACACAGAACAAAGAAACATGAGAGAATCTTTGTCTCATTTCCAAGAAGCTTTTGGAGGAGAGGTAAAGATTAGAATTTGGAAAACTTTGTTGAAATTAATGATGAGTGGGTCAGAAAATGTAGAGCTTATGCTTCTTCTATTTATGTAAATATAATACCCATTTTGTCAAATCTTAAACTTTTATTCTCCGTGACGAGTCGGTTGGTTCGGATTGAATCTTAATCAAATCCGACTCTAAATCAATGACCCATAAGTTCAAAATGGGCAACATTTAAAAGGTATCGAACTTTTTAAAATAGGCTTGGTTTCGAATTTACATGGAATGAACGAC

Coding sequence (CDS)

ATGGCTAATCGGGGAGGAGGGTCGTCTCAAGGTGGGGGAGGAGATGGACTGTACACCGAGCTTTGGAAGGCATCGGCTGGGCCTCTTGTGGAAGTTCCTCGAGTTAATGACAAGGTTTTCTACTTCCCTCAAGGCCACATGGAACAGTTGGAGGCATCTCCAAATCATGAACTGAATCAGAAACAACCCTTGTTTAAACTTTCCTCCAAAATTCTCTGCCGTGTTGTTGATGTTCGCCTGCTGGCTGAGCAGGAAACAGATGAGGTTTATGCACAGATAACTTTAATGCCTGATTCAAATCAAGAGGAACCTACAAACCCTGATCCTTCGCCACCAGAGTGTCGAAAACCGAAAGTCCATTCATTTTGCAAGGTCTTGACTGCTTCTGATACTAGCACCCATGGAGGATTCTCCGTGCTTCGTAAACACGCCACGGAATGCCTGCCTCCATTGGATATGACCCAACAGACCCCAACTCAAGAACTTGTAGCCAAAGATCTTCATGGTTACGAGTGGCGATTCAAGCATATCTTTAGGGGTCAACCACGAAGGCATTTGCTAACGACGGGATGGAGCACGTTTGTTACTTCGAAAAGACTAGTTGCTGGTGATTCTTTTGTGTTCTTGAGAGGGGAAAATGGGGAATTACGAGTCGGAGTGAGGCGTCTTGCTCGCCAACAAACCAGCATGCCTTCATCTGTGATTTCAAGTGACAGCATGCACTTAGGAGTGCTTGCTACTGCCTCTCACGCCGTGTCAACTCTAACTCGCTTTGTTGTCTATTATAAGCCAAGGGCGAGCCAGTTTATCGTCAGCTTGAATAAGTACATCGAAGCAATGAACAGGAAGTTCTTAGTTGGGATGAGATTCAAGATGAGATTCGAGGGAGAGGAGTCTCCCGAGAGAAGGTTTTCGGGTACCATTGTCGGAGTTGACGACATATCTCCTCACTGGCCCAATTCGAAATGGCAATCGCTAAGAATTCAATGGGATGAACTTGCATCTATTCCTCGACCTGATAGAGTTTCGCCATGGGAGATTGAACCTTTTGTGGCGCCTACGTCCCCGAGCATTCCGCAATCGGTTTCGGTAAAGAATAAAAGGCTTCGGCCTCCACTTGACATTCCAGATTCTGATAATTCAACCGTAACAACTCTACGACATCCAGGATCAACTCAATCACATGACGATAGGGCACAGCTTAGCATTGCTGCGTCTGAAATGAAACGATTTGAAAATCACGCAACGTGGAATTACAAGCAAACTGATGTTAGCAGCATTGGGAATTCTGTATCAAGGACCCCAAAGGAGGGCTCTTGGTTAGCTTCCCCAAATGGGAGTGTTTCGCAGCATCGATTACAGAATTTGACAGATGACCGAAACAGCAGTTATGTTTGGTCAACCGTCTTCTCGGGAGCGCCAGTAGCACAGTCGACATGTCGAGCTCCACACCCATCTAATCCAAAGAGCAGCGACCAAGTTAACGATCTTGGGGAAAAGGGGAGGAAAACTGAGGTGGCTCCAAGCTGTCGCTTGTTCGGGATCGATATCATCGGTCATTCTAAGAGCCCAGTTCCACCCGAAATGGCTGCTGATCAACCGATTAGCGCACCAAATGAAATCACTGATGCAGAGCAGAACTCAGACCAGCCAAAGGCTTCTAAAGAAAGAAAATTAGGACTTTTACAAGTACCTCCTAAAGAGATCCAGCACAAGCAGAGCAGCTCGACCAACAGCCGAAGTCGTACCAAGGTTCAAATGCAGGGGATGGCTGTCGGACGTGCTGTGGACCTTACGATGTTGGAAGGGTATGGCCAACTCATTGACGAACTGGAAAAGATGTTCGATATCAAGGGAGAACTTCACCCACGTGATAAGTGGGAGATTGTCTTCACAGACGACGAAGGAGATACAATGCTCATGGGCGATTACCCGTGGCAGGAATTCTGTAACATGGTGAGAAGAATATATATATGGTCGAGTCAGGATGTGAAGATGATGAATTCGGTTAGCAAACTCACAATGTCTGCAATGGAATGCGATGGAACGGTAATAACCTCGGAGTCGGCCGACAGCTGA

Protein sequence

MANRGGGSSQGGGGDGLYTELWKASAGPLVEVPRVNDKVFYFPQGHMEQLEASPNHELNQKQPLFKLSSKILCRVVDVRLLAEQETDEVYAQITLMPDSNQEEPTNPDPSPPECRKPKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQTSMPSSVISSDSMHLGVLATASHAVSTLTRFVVYYKPRASQFIVSLNKYIEAMNRKFLVGMRFKMRFEGEESPERRFSGTIVGVDDISPHWPNSKWQSLRIQWDELASIPRPDRVSPWEIEPFVAPTSPSIPQSVSVKNKRLRPPLDIPDSDNSTVTTLRHPGSTQSHDDRAQLSIAASEMKRFENHATWNYKQTDVSSIGNSVSRTPKEGSWLASPNGSVSQHRLQNLTDDRNSSYVWSTVFSGAPVAQSTCRAPHPSNPKSSDQVNDLGEKGRKTEVAPSCRLFGIDIIGHSKSPVPPEMAADQPISAPNEITDAEQNSDQPKASKERKLGLLQVPPKEIQHKQSSSTNSRSRTKVQMQGMAVGRAVDLTMLEGYGQLIDELEKMFDIKGELHPRDKWEIVFTDDEGDTMLMGDYPWQEFCNMVRRIYIWSSQDVKMMNSVSKLTMSAMECDGTVITSESADS

Homology

[Close]

BLAST of CmaCh16G005330 vs. ExPASy Swiss-Prot
Match: Q9XED8 (Auxin response factor 9 OS=Arabidopsis thaliana OX=3702 GN=ARF9 PE=1 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 1.8e-202
Identity = 395/698 (56.59%), Postives = 482/698 (69.05%), Query Frame = 0


Query: 1   MANRGGGSSQGGGGDGLYTELWKASAGPLVEVPRVNDKVFYFPQGHMEQLEASPNH-ELN 60
           MANR        GG+ LY ELWK  AGPLV+VP+  ++V+YFPQGHMEQLEAS    +LN
Sbjct: 1   MANR--------GGEYLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLN 60

Query: 61  QKQPLFKLSSKILCRVVDVRLLAEQETDEVYAQITLMPDSNQ-EEPTNPDPSPPECRKPK 120
             +PLF L  KILC V++V L AE++TDEVYAQITL+P   + +EP +PDPSPPE ++PK
Sbjct: 61  TMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPK 120

Query: 121 VHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIF 180
           VHSF KVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVA+D+HGY+W+FKHIF
Sbjct: 121 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIF 180

Query: 181 RGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQTSMPSSVISSD 240
           RGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGELRVGVRR   QQ+SMPSSVISS 
Sbjct: 181 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSH 240

Query: 241 SMHLGVLATASHAVSTLTRFVVYYKPRASQFIVSLNKYIEAMNRKFLVGMRFKMRFEGEE 300
           SMHLGVLATA HA  T T F+VYYKPR SQFI+SLNKY+EAM+ KF VGMRFKMRFEGE+
Sbjct: 241 SMHLGVLATARHATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGED 300

Query: 301 SPERRFSGTIVGVDDISPHWPNSKWQSLRIQWDELASIPRPDRVSPWEIEPFVAPTSPSI 360
           SPERR+SGT++GV D SPHW +SKW+ L + WDE ASI RP++VSPWEIEPFV   S ++
Sbjct: 301 SPERRYSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFV--NSENV 360

Query: 361 PQSVSVKNKRLRPPLDIPDSD-NSTVTTLRHPGSTQSHDDRAQLSIAASEMKRFENHATW 420
           P+SV +KNKR R   ++   D   T + L     TQ H + AQ  I +           W
Sbjct: 361 PKSVMLKNKRPRQVSEVSALDVGITASNLWSSVLTQPH-EFAQSCITSQ----------W 420

Query: 421 NYKQTDVSSIGNSVSRTPKEGSWLASPNGSVSQHRLQNLTDDRNSSYVWSTVFSGAPVAQ 480
           +  Q          +   K+  WL                   N+SY  S V   + +  
Sbjct: 421 SSPQ----QCHRDANEDAKKSDWL-------------------NNSYSVSNVAKDSTL-- 480

Query: 481 STCRAPHPSNPKSSDQVNDLGEKGRKTEVAPSCRLFGIDIIGHSKSPVPPEMAADQ---P 540
                        +DQ+    E+ +K E   + RLFGID++  S + VP E  A      
Sbjct: 481 -------------NDQMVSPVEQ-KKPETTANYRLFGIDLMSSSLA-VPEEKTAPMRPIN 540

Query: 541 ISAPNEITDAEQNSDQPKASKERKLGLLQVPPKEIQHKQSSSTNSRSRTKVQMQGMAVGR 600
           IS P   + ++  S+  K S+E+K    +  PKE+Q KQSSST  RSRTKVQMQG+ VGR
Sbjct: 541 ISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQSSST--RSRTKVQMQGVPVGR 600

Query: 601 AVDLTMLEGYGQLIDELEKMFDIKGELHPRDKWEIVFTDDEGDTMLMGDYPWQEFCNMVR 660
           AVDL  L+GY +LID++EK+FDIKGEL  R++WEIVFTDDEGD ML+GD PW EFCNMV+
Sbjct: 601 AVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVK 635

Query: 661 RIYIWSSQDVKMMNSVSKLTMSAMECDGTVITSESADS 693
           RI+IWS ++VK M   ++L M   E + T+ T+   D+
Sbjct: 661 RIFIWSKEEVKKMTPGNQLRMLLREVETTLTTTSKTDN 635

[Close]

BLAST of CmaCh16G005330 vs. ExPASy Swiss-Prot
Match: Q9ZPY6 (Auxin response factor 11 OS=Arabidopsis thaliana OX=3702 GN=ARF11 PE=2 SV=3)

HSP 1 Score: 636.0 bits (1639), Expect = 5.1e-181
Identity = 366/684 (53.51%), Postives = 436/684 (63.74%), Query Frame = 0


Query: 7   GSSQGGGGDGLYTELWKASAGPLVEVPRVNDKVFYFPQGHMEQLEASPNH-ELNQKQPLF 66
           G + G   D LYTELWKA AGPLVEVPR  ++VFYFPQGHMEQL AS N   ++Q+ P+F
Sbjct: 29  GWNLGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF 88

Query: 67  KLSSKILCRVVDVRLLAEQETDEVYAQITLMPDSNQEEPTNPDPSPPECRKPKVHSFCKV 126
            L  KILCRV+ V L AE ETDEVYAQITL P+ +Q EPT+ DP   E  KP V SF K+
Sbjct: 89  NLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKI 148

Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
           LTASDTSTHGGFSVLRKHATECLP LDMTQ TPTQELVA+DLHGYEWRFKHIFRGQPRRH
Sbjct: 149 LTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRH 208

Query: 187 LLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQTSMPSSVISSDSMHLGVL 246
           LLTTGWSTFVTSKRLVAGD+FVFLRGE G+LRVGVRRLA+QQ++MP+SVISS SM LGVL
Sbjct: 209 LLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVL 268

Query: 247 ATASHAVSTLTRFVVYYKPRASQFIVSLNKYIEAMNRKFLVGMRFKMRFEGEESPERRFS 306
           ATASHAV+T T FVV+YKPR SQFI+S+NKY+ AM   F +GMR++MRFEGEESPER F+
Sbjct: 269 ATASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFT 328

Query: 307 GTIVGVDDISPHWPNSKWQSLRIQWDELASIPRPDRVSPWEIEPFVAPTSPSIPQSVSVK 366
           GTI+G  D+S  WP SKW+SL+IQWDE +SI RP++VSPWEIEPF        P     K
Sbjct: 329 GTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQSK 388

Query: 367 NKRLRPPLDIPDSDNSTVTTLRHPGSTQSHDDRAQLSIAASEMKRFENHATWNYKQTDVS 426
           +KR RP   I +   S V +      +QSH+    + +       F++ AT         
Sbjct: 389 SKRSRP---ISEITGSPVASSFLSSFSQSHESNPSVKLL------FQDPAT--------- 448

Query: 427 SIGNSVSRTPKEGSWLASPNGSVSQHRLQNLTDDRNSSYVWSTVFSGAPVAQSTCRAPHP 486
                                            +RNS+    +VFS     + T      
Sbjct: 449 ---------------------------------ERNSN---KSVFSSGLQCKIT------ 508

Query: 487 SNPKSSDQVNDLGEKGRKTEVAPSCRLFGIDIIGHSKSPVPPEMAADQPISAPNEITDAE 546
                            +  V  SCRLFG D+     S   P     Q IS  + I+D+ 
Sbjct: 509 -----------------EAPVTSSCRLFGFDLTSKPASATIPH--DKQLISVDSNISDST 568

Query: 547 QNSDQPKASKERKLGLLQVPPKEIQHKQSSSTNSRSRTKVQMQGMAVGRAVDLTMLEGYG 606
                P +S           PKE    Q   T++RSR KVQMQG AVGRAVDLT+L  Y 
Sbjct: 569 TKCQDPNSSNS---------PKE----QKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYD 615

Query: 607 QLIDELEKMFDIKGELHPRDKWEIVFTDDEGDTMLMGDYPWQEFCNMVRRIYIWSSQDVK 666
           +LI ELEKMF+I+GEL P+DKW IVFTDDEGD ML+GD PW EFC M ++++I+ S +VK
Sbjct: 629 ELIKELEKMFEIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVK 615

Query: 667 MMNSVSKLTMSAMECDGTVITSES 690
            M S S L        GT++  ES
Sbjct: 689 KMRSKSLLGDK-----GTIVNLES 615

[Close]

BLAST of CmaCh16G005330 vs. ExPASy Swiss-Prot
Match: Q9C5W9 (Auxin response factor 18 OS=Arabidopsis thaliana OX=3702 GN=ARF18 PE=1 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 1.1e-175
Identity = 356/674 (52.82%), Postives = 432/674 (64.09%), Query Frame = 0


Query: 6   GGSSQGGGGDGLYTELWKASAGPLVEVPRVNDKVFYFPQGHMEQLEASPNHELNQKQ-PL 65
           G SS     D LYTELWK  AGPLVEVPR  ++VFYFPQGHMEQL AS N  +N ++ P+
Sbjct: 11  GSSSSRSYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPV 70

Query: 66  FKLSSKILCRVVDVRLLAEQETDEVYAQITLMPDSNQEEPTNPDPSPPECRKPKVHSFCK 125
           F L  KILCRV+DV L AE ETDEVYAQITL P+ +Q EPT+ DP      K + HSF K
Sbjct: 71  FDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVK 130

Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
           +LTASDTSTHGGFSVLRKHATECLP LDMTQ TPTQELV +DLHG+EWRFKHIFRGQPRR
Sbjct: 131 ILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRR 190

Query: 186 HLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQTSMPSSVISSDSMHLGV 245
           HLLTTGWSTFV+SKRLVAGD+FVFLRGENG+LRVGVRRLAR Q++MP+SVISS SMHLGV
Sbjct: 191 HLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGV 250

Query: 246 LATASHAVSTLTRFVVYYKPRASQFIVSLNKYIEAMNRKFLVGMRFKMRFEGEESPERRF 305
           LATASHAV T T FVV+YKPR SQFIV +NKY+EA+   F +G RF+MRFEGEESPER F
Sbjct: 251 LATASHAVRTTTIFVVFYKPRISQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIF 310

Query: 306 SGTIVGVDDISPHWPNSKWQSLRIQWDELASIPRPDRVSPWEIEPFVAPTSPSIP-QSVS 365
           +GTIVG  D+S  WP SKW+SL++QWDE  ++ RPD+VSPWEIEPF+A +  S P Q   
Sbjct: 311 TGTIVGSGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQ 370

Query: 366 VKNKRLRPPLDIPDSDNSTVTTLRHPGSTQSHDDRAQLSIAASEMKRFENHATWNYKQTD 425
            K KR RP                                                    
Sbjct: 371 SKCKRSRP---------------------------------------------------- 430

Query: 426 VSSIGNSVSRTPKEGSWLAS-PNGSVSQHRLQNLTDDRNSSYVWSTVFSGAPVAQSTCRA 485
              I  SV +TP   S+L S P    S +    L  D +   +     SG   + ++ + 
Sbjct: 431 ---IEPSV-KTPAPPSFLYSLPQSQDSINASLKLFQDPSLERI-----SGGYSSNNSFKP 490

Query: 486 PHPSNPKSSDQVNDLGEKGRKTEVAPSCRLFGIDIIGHSKSPVPPEMAADQPISAPNEIT 545
             P  P +                  S RLFG D+  +S +P+P +              
Sbjct: 491 ETPPPPTNC-----------------SYRLFGFDLTSNSPAPIPQD-------------- 550

Query: 546 DAEQNSDQPKASKERKLGLLQVPPKEIQHKQSSSTNSRSRTKVQMQGMAVGRAVDLTMLE 605
             +Q  D   A+K ++     + P  +  ++   T SRSRTKVQMQG+AVGRAVDLT+L+
Sbjct: 551 --KQPMDTCGAAKCQE----PITPTSMSEQKKQQT-SRSRTKVQMQGIAVGRAVDLTLLK 585

Query: 606 GYGQLIDELEKMFDIKGELHPRDKWEIVFTDDEGDTMLMGDYPWQEFCNMVRRIYIWSSQ 665
            Y +LIDELE+MF+I+G+L  RDKW +VFTDDEGD ML GD PW EFC M ++I+I+SS 
Sbjct: 611 SYDELIDELEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSD 585

Query: 666 DVKMMNSVSKLTMS 677
           +VK M +  K++ S
Sbjct: 671 EVKKMTTKLKISSS 585

[Close]

BLAST of CmaCh16G005330 vs. ExPASy Swiss-Prot
Match: Q6YVY0 (Auxin response factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF7 PE=2 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 6.3e-171
Identity = 350/679 (51.55%), Postives = 432/679 (63.62%), Query Frame = 0


Query: 2   ANRGGGSSQGGGGDGLYTELWKASAGPLVEVPRVNDKVFYFPQGHMEQLEASPNHELNQK 61
           A  GGG+  G   D LY ELW A AGPLV VPR  + V+YFPQGHMEQLEAS + +L+Q 
Sbjct: 10  AAAGGGT--GSSCDALYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQH 69

Query: 62  QPLFKLSSKILCRVVDVRLLAEQETDEVYAQITLMPDSNQEEPTNPDPSPPECRKPKVHS 121
            PLF L SKILC+VV+V L AE ++DEVYAQI L P+++Q E T+P P P E  K  VHS
Sbjct: 70  LPLFNLPSKILCKVVNVELRAETDSDEVYAQIMLQPEADQNELTSPKPEPHEPEKCNVHS 129

Query: 122 FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQ 181
           FCK LTASDTSTHGGFSVLR+HA ECLPPLDMTQ  P QELVA+DLHG EW F+HIFRGQ
Sbjct: 130 FCKTLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQ 189

Query: 182 PRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQTSMPSSVISSDSMH 241
           PRRHLLTTGWS FV+SKRLVAGD+F+FLRGENGELRVGVRRL RQ  +MPSSVISS SMH
Sbjct: 190 PRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMH 249

Query: 242 LGVLATASHAVSTLTRFVVYYKPRASQ--FIVSLNKYIEAMNRKFLVGMRFKMRFEGEES 301
           LGVLATASHA+ST T F V+YKPR SQ  F+VS NKY+EA N K  VGMRFKMRFEG+E+
Sbjct: 250 LGVLATASHAISTGTLFSVFYKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEA 309

Query: 302 PERRFSGTIVGVDDISPH-WPNSKWQSLRIQWDELASIPRPDRVSPWEIEPFVAPTSPSI 361
           PERRFSGTI+GV  +S   W NS W+SL++QWDE + +PRPDRVSPWE+EP     S   
Sbjct: 310 PERRFSGTIIGVGSMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPS 369

Query: 362 PQSVSVKNKRLRPPLDIPDSDNSTVTTLRHPGSTQSHDDRAQLSIAASEMKRFENHATWN 421
           PQ    +NKR RPP     + NS    L            +    + S ++R +    + 
Sbjct: 370 PQP-PARNKRARPP-----ASNSIAPELPPVFGLWKSSAESTQGFSFSGLQRTQE--LYP 429

Query: 422 YKQTDVSSIGNSVSRTPKEGSWLASPNGSVSQHRLQNLTDDRNSSYVWSTVFSGAPVAQS 481
                + S   +V  + K       P+   ++H    + + R +SY              
Sbjct: 430 SSPNPIFSTSLNVGFSTKN-----EPSALSNKHFYWPMRETRANSY-------------- 489

Query: 482 TCRAPHPSNPKSSDQVNDLGEKGRKTEVAPSCRLFGIDIIG--HSKSPVPPEMAADQPIS 541
                       S  ++ +  + ++   +  CRLFGI+I     + SP+       Q   
Sbjct: 490 ------------SASISKVPSEKKQEPSSAGCRLFGIEISSAVEATSPLAAVSGVGQDQP 549

Query: 542 APNEITDAEQNSDQPKASKERKLGLLQVP-PKEIQHKQSSSTNSRSRTKVQMQGMAVGRA 601
           A +   +++Q S    A+K         P P E Q +Q      RS TKV MQGMAVGRA
Sbjct: 550 AASVDAESDQLSQPSHANKSDAPAASSEPSPHETQSRQ-----VRSCTKVIMQGMAVGRA 609

Query: 602 VDLTMLEGYGQLIDELEKMFDIKGELHPR-DKWEIVFTDDEGDTMLMGDYPWQEFCNMVR 661
           VDLT L GY  L  +LE+MFDI+GEL     KW++V+TDDE D ML+GD PW EFC+MV+
Sbjct: 610 VDLTRLHGYDDLRCKLEEMFDIQGELSASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVK 642

Query: 662 RIYIWSSQDVKMMNSVSKL 674
           RIYI++ ++ K +   SKL
Sbjct: 670 RIYIYTYEEAKQLTPKSKL 642

[Close]

BLAST of CmaCh16G005330 vs. ExPASy Swiss-Prot
Match: Q0JCZ4 (Auxin response factor 9 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF9 PE=2 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 2.0e-164
Identity = 347/697 (49.78%), Postives = 440/697 (63.13%), Query Frame = 0


Query: 1   MANRGGGSSQGGGGDGLYTELWKASAGPLVEVPRVNDKVFYFPQGHMEQLEASPNHELNQ 60
           MA   GGS  G   D L+ ELW A AGPLV VP+  ++V+YFPQGHMEQLEAS N +L+Q
Sbjct: 7   MAANPGGS--GTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQ 66

Query: 61  KQPLFKLSSKILCRVVDVRLLAEQETDEVYAQITLMPDSNQEEPTNPDPSPPECRKPKVH 120
             P+F L SKILC VV+V L AE ++DEVYAQI L P+++Q E T+ DP   +  K   H
Sbjct: 67  YLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAH 126

Query: 121 SFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRG 180
           SFCK LTASDTSTHGGFSVLR+HA ECLP LDM+Q  P QELVAKDLHG EW F+HIFRG
Sbjct: 127 SFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRG 186

Query: 181 QPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQTSMPSSVISSDSM 240
           QPRRHLLTTGWS FV+SKRLVAGD+F+FLRGE+GELRVGVRRL RQ  +MPSSVISS SM
Sbjct: 187 QPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSM 246

Query: 241 HLGVLATASHAVSTLTRFVVYYKPRA--SQFIVSLNKYIEAMNRKFLVGMRFKMRFEGEE 300
           HLGVLATASHA+ST T F V+YKPR   S+F+VS+NKY+EA  +   VGMRFKMRFEG+E
Sbjct: 247 HLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDE 306

Query: 301 SPERRFSGTIVGVDDI-----SPHWPNSKWQSLRIQWDELASIPRPDRVSPWEIEPFVAP 360
           +PERRFSGTI+G+  +     SP W +S W+SL++QWDE ++I RPDRVSPWE+EP  A 
Sbjct: 307 APERRFSGTIIGIGSVPAMSKSP-WADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDA- 366

Query: 361 TSPSIPQSVSVKNKRLRPPLDIPDSDNSTVTTLRHPGSTQSHDDRAQLSIAASEMKRFEN 420
           ++P  PQ   ++NKR RPP     +  S V  L            A  +++ SE +R   
Sbjct: 367 SNPQPPQP-PLRNKRARPP-----ASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQR--- 426

Query: 421 HATWNYKQTDVSSIGNSVSRTPKEGSWLASPNGSVSQHRLQ-NLTDDRNSSYVWSTVFSG 480
                  +    SI  S+        + +    S+  ++   ++ D +  S+  ST    
Sbjct: 427 ------AREIFPSIPASIFSASSHVEFNSKNEPSILSNQFYWSMRDSKTDSFSAST---- 486

Query: 481 APVAQSTCRAPHPSNPKSSDQVNDLGEKGRKTEVAPSCRLFGIDI--------------- 540
                                 N    + ++      CRLFGI+I               
Sbjct: 487 ----------------------NKTRVERKQEPTTMGCRLFGIEISSAVEEALPAATVSG 546

Query: 541 IGHSKSPVPPEMAADQPISAPNEITDAEQNSDQPKASKERKLGLLQVPPKEIQHKQSSST 600
           +G+ ++ +  ++ +DQ IS P+        SD P  S ER        P E Q +Q    
Sbjct: 547 VGYDQTVLSVDVDSDQ-ISQPSN----GNKSDAPGTSSERS-------PLESQSRQ---- 606

Query: 601 NSRSRTKVQMQGMAVGRAVDLTMLEGYGQLIDELEKMFDIKGELHPR-DKWEIVFTDDEG 660
             RS TKV MQGMAVGRAVDLT L GYG L  +LE+MFDI+G+L P   +W++V+TDDE 
Sbjct: 607 -VRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDED 641

Query: 661 DTMLMGDYPWQEFCNMVRRIYIWSSQDVKMMNSVSKL 674
           D ML+GD PW EFC+MV+RIYI+S ++ K++   SKL
Sbjct: 667 DMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKL 641

[Close]

BLAST of CmaCh16G005330 vs. TAIR 10
Match: AT4G23980.1 (auxin response factor 9 )

HSP 1 Score: 707.2 bits (1824), Expect = 1.3e-203
Identity = 395/698 (56.59%), Postives = 482/698 (69.05%), Query Frame = 0


Query: 1   MANRGGGSSQGGGGDGLYTELWKASAGPLVEVPRVNDKVFYFPQGHMEQLEASPNH-ELN 60
           MANR        GG+ LY ELWK  AGPLV+VP+  ++V+YFPQGHMEQLEAS    +LN
Sbjct: 1   MANR--------GGEYLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLN 60

Query: 61  QKQPLFKLSSKILCRVVDVRLLAEQETDEVYAQITLMPDSNQ-EEPTNPDPSPPECRKPK 120
             +PLF L  KILC V++V L AE++TDEVYAQITL+P   + +EP +PDPSPPE ++PK
Sbjct: 61  TMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPK 120

Query: 121 VHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIF 180
           VHSF KVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVA+D+HGY+W+FKHIF
Sbjct: 121 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIF 180

Query: 181 RGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQTSMPSSVISSD 240
           RGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGELRVGVRR   QQ+SMPSSVISS 
Sbjct: 181 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSH 240

Query: 241 SMHLGVLATASHAVSTLTRFVVYYKPRASQFIVSLNKYIEAMNRKFLVGMRFKMRFEGEE 300
           SMHLGVLATA HA  T T F+VYYKPR SQFI+SLNKY+EAM+ KF VGMRFKMRFEGE+
Sbjct: 241 SMHLGVLATARHATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGED 300

Query: 301 SPERRFSGTIVGVDDISPHWPNSKWQSLRIQWDELASIPRPDRVSPWEIEPFVAPTSPSI 360
           SPERR+SGT++GV D SPHW +SKW+ L + WDE ASI RP++VSPWEIEPFV   S ++
Sbjct: 301 SPERRYSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFV--NSENV 360

Query: 361 PQSVSVKNKRLRPPLDIPDSD-NSTVTTLRHPGSTQSHDDRAQLSIAASEMKRFENHATW 420
           P+SV +KNKR R   ++   D   T + L     TQ H + AQ  I +           W
Sbjct: 361 PKSVMLKNKRPRQVSEVSALDVGITASNLWSSVLTQPH-EFAQSCITSQ----------W 420

Query: 421 NYKQTDVSSIGNSVSRTPKEGSWLASPNGSVSQHRLQNLTDDRNSSYVWSTVFSGAPVAQ 480
           +  Q          +   K+  WL                   N+SY  S V   + +  
Sbjct: 421 SSPQ----QCHRDANEDAKKSDWL-------------------NNSYSVSNVAKDSTL-- 480

Query: 481 STCRAPHPSNPKSSDQVNDLGEKGRKTEVAPSCRLFGIDIIGHSKSPVPPEMAADQ---P 540
                        +DQ+    E+ +K E   + RLFGID++  S + VP E  A      
Sbjct: 481 -------------NDQMVSPVEQ-KKPETTANYRLFGIDLMSSSLA-VPEEKTAPMRPIN 540

Query: 541 ISAPNEITDAEQNSDQPKASKERKLGLLQVPPKEIQHKQSSSTNSRSRTKVQMQGMAVGR 600
           IS P   + ++  S+  K S+E+K    +  PKE+Q KQSSST  RSRTKVQMQG+ VGR
Sbjct: 541 ISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQSSST--RSRTKVQMQGVPVGR 600

Query: 601 AVDLTMLEGYGQLIDELEKMFDIKGELHPRDKWEIVFTDDEGDTMLMGDYPWQEFCNMVR 660
           AVDL  L+GY +LID++EK+FDIKGEL  R++WEIVFTDDEGD ML+GD PW EFCNMV+
Sbjct: 601 AVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVK 635

Query: 661 RIYIWSSQDVKMMNSVSKLTMSAMECDGTVITSESADS 693
           RI+IWS ++VK M   ++L M   E + T+ T+   D+
Sbjct: 661 RIFIWSKEEVKKMTPGNQLRMLLREVETTLTTTSKTDN 635

[Close]

BLAST of CmaCh16G005330 vs. TAIR 10
Match: AT4G23980.2 (auxin response factor 9 )

HSP 1 Score: 706.1 bits (1821), Expect = 2.9e-203
Identity = 394/697 (56.53%), Postives = 482/697 (69.15%), Query Frame = 0


Query: 1   MANRGGGSSQGGGGDGLYTELWKASAGPLVEVPRVNDKVFYFPQGHMEQLEASPNH-ELN 60
           MANR        GG+ LY ELWK  AGPLV+VP+  ++V+YFPQGHMEQLEAS    +LN
Sbjct: 1   MANR--------GGEYLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLN 60

Query: 61  QKQPLFKLSSKILCRVVDVRLLAEQETDEVYAQITLMPDSNQ-EEPTNPDPSPPECRKPK 120
             +PLF L  KILC V++V L AE++TDEVYAQITL+P   + +EP +PDPSPPE ++PK
Sbjct: 61  TMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPK 120

Query: 121 VHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIF 180
           VHSF KVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVA+D+HGY+W+FKHIF
Sbjct: 121 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIF 180

Query: 181 RGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQTSMPSSVISSD 240
           RGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGELRVGVRR   QQ+SMPSSVISS 
Sbjct: 181 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSH 240

Query: 241 SMHLGVLATASHAVSTLTRFVVYYKPRASQFIVSLNKYIEAMNRKFLVGMRFKMRFEGEE 300
           SMHLGVLATA HA  T T F+VYYKPR SQFI+SLNKY+EAM+ KF VGMRFKMRFEGE+
Sbjct: 241 SMHLGVLATARHATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGED 300

Query: 301 SPERRFSGTIVGVDDISPHWPNSKWQSLRIQWDELASIPRPDRVSPWEIEPFVAPTSPSI 360
           SPERR+SGT++GV D SPHW +SKW+ L + WDE ASI RP++VSPWEIEPFV   S ++
Sbjct: 301 SPERRYSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFV--NSENV 360

Query: 361 PQSVSVKNKRLRPPLDIPDSDNSTVTTLRHPGSTQSHDDRAQLSIAASEMKRFENHATWN 420
           P+SV +KNKR R   ++  +   T + L     TQ H + AQ  I +           W+
Sbjct: 361 PKSVMLKNKRPRQVSEV-SALGITASNLWSSVLTQPH-EFAQSCITSQ----------WS 420

Query: 421 YKQTDVSSIGNSVSRTPKEGSWLASPNGSVSQHRLQNLTDDRNSSYVWSTVFSGAPVAQS 480
             Q          +   K+  WL                   N+SY  S V   + +   
Sbjct: 421 SPQ----QCHRDANEDAKKSDWL-------------------NNSYSVSNVAKDSTL--- 480

Query: 481 TCRAPHPSNPKSSDQVNDLGEKGRKTEVAPSCRLFGIDIIGHSKSPVPPEMAADQ---PI 540
                       +DQ+    E+ +K E   + RLFGID++  S + VP E  A      I
Sbjct: 481 ------------NDQMVSPVEQ-KKPETTANYRLFGIDLMSSSLA-VPEEKTAPMRPINI 540

Query: 541 SAPNEITDAEQNSDQPKASKERKLGLLQVPPKEIQHKQSSSTNSRSRTKVQMQGMAVGRA 600
           S P   + ++  S+  K S+E+K    +  PKE+Q KQSSST  RSRTKVQMQG+ VGRA
Sbjct: 541 SKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQSSST--RSRTKVQMQGVPVGRA 600

Query: 601 VDLTMLEGYGQLIDELEKMFDIKGELHPRDKWEIVFTDDEGDTMLMGDYPWQEFCNMVRR 660
           VDL  L+GY +LID++EK+FDIKGEL  R++WEIVFTDDEGD ML+GD PW EFCNMV+R
Sbjct: 601 VDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKR 633

Query: 661 IYIWSSQDVKMMNSVSKLTMSAMECDGTVITSESADS 693
           I+IWS ++VK M   ++L M   E + T+ T+   D+
Sbjct: 661 IFIWSKEEVKKMTPGNQLRMLLREVETTLTTTSKTDN 633

[Close]

BLAST of CmaCh16G005330 vs. TAIR 10
Match: AT2G46530.1 (auxin response factor 11 )

HSP 1 Score: 636.3 bits (1640), Expect = 2.8e-182
Identity = 365/682 (53.52%), Postives = 435/682 (63.78%), Query Frame = 0


Query: 9   SQGGGGDGLYTELWKASAGPLVEVPRVNDKVFYFPQGHMEQLEASPNH-ELNQKQPLFKL 68
           + G   D LYTELWKA AGPLVEVPR  ++VFYFPQGHMEQL AS N   ++Q+ P+F L
Sbjct: 10  TSGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNL 69

Query: 69  SSKILCRVVDVRLLAEQETDEVYAQITLMPDSNQEEPTNPDPSPPECRKPKVHSFCKVLT 128
             KILCRV+ V L AE ETDEVYAQITL P+ +Q EPT+ DP   E  KP V SF K+LT
Sbjct: 70  PPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILT 129

Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
           ASDTSTHGGFSVLRKHATECLP LDMTQ TPTQELVA+DLHGYEWRFKHIFRGQPRRHLL
Sbjct: 130 ASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLL 189

Query: 189 TTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQTSMPSSVISSDSMHLGVLAT 248
           TTGWSTFVTSKRLVAGD+FVFLRGE G+LRVGVRRLA+QQ++MP+SVISS SM LGVLAT
Sbjct: 190 TTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLAT 249

Query: 249 ASHAVSTLTRFVVYYKPRASQFIVSLNKYIEAMNRKFLVGMRFKMRFEGEESPERRFSGT 308
           ASHAV+T T FVV+YKPR SQFI+S+NKY+ AM   F +GMR++MRFEGEESPER F+GT
Sbjct: 250 ASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGT 309

Query: 309 IVGVDDISPHWPNSKWQSLRIQWDELASIPRPDRVSPWEIEPFVAPTSPSIPQSVSVKNK 368
           I+G  D+S  WP SKW+SL+IQWDE +SI RP++VSPWEIEPF        P     K+K
Sbjct: 310 IIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQSKSK 369

Query: 369 RLRPPLDIPDSDNSTVTTLRHPGSTQSHDDRAQLSIAASEMKRFENHATWNYKQTDVSSI 428
           R RP   I +   S V +      +QSH+    + +       F++ AT           
Sbjct: 370 RSRP---ISEITGSPVASSFLSSFSQSHESNPSVKLL------FQDPAT----------- 429

Query: 429 GNSVSRTPKEGSWLASPNGSVSQHRLQNLTDDRNSSYVWSTVFSGAPVAQSTCRAPHPSN 488
                                          +RNS+    +VFS     + T        
Sbjct: 430 -------------------------------ERNSN---KSVFSSGLQCKIT-------- 489

Query: 489 PKSSDQVNDLGEKGRKTEVAPSCRLFGIDIIGHSKSPVPPEMAADQPISAPNEITDAEQN 548
                          +  V  SCRLFG D+     S   P     Q IS  + I+D+   
Sbjct: 490 ---------------EAPVTSSCRLFGFDLTSKPASATIPH--DKQLISVDSNISDSTTK 549

Query: 549 SDQPKASKERKLGLLQVPPKEIQHKQSSSTNSRSRTKVQMQGMAVGRAVDLTMLEGYGQL 608
              P +S           PKE    Q   T++RSR KVQMQG AVGRAVDLT+L  Y +L
Sbjct: 550 CQDPNSSNS---------PKE----QKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDEL 594

Query: 609 IDELEKMFDIKGELHPRDKWEIVFTDDEGDTMLMGDYPWQEFCNMVRRIYIWSSQDVKMM 668
           I ELEKMF+I+GEL P+DKW IVFTDDEGD ML+GD PW EFC M ++++I+ S +VK M
Sbjct: 610 IKELEKMFEIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKM 594

Query: 669 NSVSKLTMSAMECDGTVITSES 690
            S S L        GT++  ES
Sbjct: 670 RSKSLLGDK-----GTIVNLES 594

[Close]

BLAST of CmaCh16G005330 vs. TAIR 10
Match: AT2G46530.3 (auxin response factor 11 )

HSP 1 Score: 636.0 bits (1639), Expect = 3.6e-182
Identity = 366/684 (53.51%), Postives = 436/684 (63.74%), Query Frame = 0


Query: 7   GSSQGGGGDGLYTELWKASAGPLVEVPRVNDKVFYFPQGHMEQLEASPNH-ELNQKQPLF 66
           G + G   D LYTELWKA AGPLVEVPR  ++VFYFPQGHMEQL AS N   ++Q+ P+F
Sbjct: 29  GWNLGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF 88

Query: 67  KLSSKILCRVVDVRLLAEQETDEVYAQITLMPDSNQEEPTNPDPSPPECRKPKVHSFCKV 126
            L  KILCRV+ V L AE ETDEVYAQITL P+ +Q EPT+ DP   E  KP V SF K+
Sbjct: 89  NLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKI 148

Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
           LTASDTSTHGGFSVLRKHATECLP LDMTQ TPTQELVA+DLHGYEWRFKHIFRGQPRRH
Sbjct: 149 LTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRH 208

Query: 187 LLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQTSMPSSVISSDSMHLGVL 246
           LLTTGWSTFVTSKRLVAGD+FVFLRGE G+LRVGVRRLA+QQ++MP+SVISS SM LGVL
Sbjct: 209 LLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVL 268

Query: 247 ATASHAVSTLTRFVVYYKPRASQFIVSLNKYIEAMNRKFLVGMRFKMRFEGEESPERRFS 306
           ATASHAV+T T FVV+YKPR SQFI+S+NKY+ AM   F +GMR++MRFEGEESPER F+
Sbjct: 269 ATASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFT 328

Query: 307 GTIVGVDDISPHWPNSKWQSLRIQWDELASIPRPDRVSPWEIEPFVAPTSPSIPQSVSVK 366
           GTI+G  D+S  WP SKW+SL+IQWDE +SI RP++VSPWEIEPF        P     K
Sbjct: 329 GTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQSK 388

Query: 367 NKRLRPPLDIPDSDNSTVTTLRHPGSTQSHDDRAQLSIAASEMKRFENHATWNYKQTDVS 426
           +KR RP   I +   S V +      +QSH+    + +       F++ AT         
Sbjct: 389 SKRSRP---ISEITGSPVASSFLSSFSQSHESNPSVKLL------FQDPAT--------- 448

Query: 427 SIGNSVSRTPKEGSWLASPNGSVSQHRLQNLTDDRNSSYVWSTVFSGAPVAQSTCRAPHP 486
                                            +RNS+    +VFS     + T      
Sbjct: 449 ---------------------------------ERNSN---KSVFSSGLQCKIT------ 508

Query: 487 SNPKSSDQVNDLGEKGRKTEVAPSCRLFGIDIIGHSKSPVPPEMAADQPISAPNEITDAE 546
                            +  V  SCRLFG D+     S   P     Q IS  + I+D+ 
Sbjct: 509 -----------------EAPVTSSCRLFGFDLTSKPASATIPH--DKQLISVDSNISDST 568

Query: 547 QNSDQPKASKERKLGLLQVPPKEIQHKQSSSTNSRSRTKVQMQGMAVGRAVDLTMLEGYG 606
                P +S           PKE    Q   T++RSR KVQMQG AVGRAVDLT+L  Y 
Sbjct: 569 TKCQDPNSSNS---------PKE----QKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYD 615

Query: 607 QLIDELEKMFDIKGELHPRDKWEIVFTDDEGDTMLMGDYPWQEFCNMVRRIYIWSSQDVK 666
           +LI ELEKMF+I+GEL P+DKW IVFTDDEGD ML+GD PW EFC M ++++I+ S +VK
Sbjct: 629 ELIKELEKMFEIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVK 615

Query: 667 MMNSVSKLTMSAMECDGTVITSES 690
            M S S L        GT++  ES
Sbjct: 689 KMRSKSLLGDK-----GTIVNLES 615

[Close]

BLAST of CmaCh16G005330 vs. TAIR 10
Match: AT3G61830.1 (auxin response factor 18 )

HSP 1 Score: 618.2 bits (1593), Expect = 7.8e-177
Identity = 356/674 (52.82%), Postives = 432/674 (64.09%), Query Frame = 0


Query: 6   GGSSQGGGGDGLYTELWKASAGPLVEVPRVNDKVFYFPQGHMEQLEASPNHELNQKQ-PL 65
           G SS     D LYTELWK  AGPLVEVPR  ++VFYFPQGHMEQL AS N  +N ++ P+
Sbjct: 11  GSSSSRSYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPV 70

Query: 66  FKLSSKILCRVVDVRLLAEQETDEVYAQITLMPDSNQEEPTNPDPSPPECRKPKVHSFCK 125
           F L  KILCRV+DV L AE ETDEVYAQITL P+ +Q EPT+ DP      K + HSF K
Sbjct: 71  FDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVK 130

Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
           +LTASDTSTHGGFSVLRKHATECLP LDMTQ TPTQELV +DLHG+EWRFKHIFRGQPRR
Sbjct: 131 ILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRR 190

Query: 186 HLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQTSMPSSVISSDSMHLGV 245
           HLLTTGWSTFV+SKRLVAGD+FVFLRGENG+LRVGVRRLAR Q++MP+SVISS SMHLGV
Sbjct: 191 HLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGV 250

Query: 246 LATASHAVSTLTRFVVYYKPRASQFIVSLNKYIEAMNRKFLVGMRFKMRFEGEESPERRF 305
           LATASHAV T T FVV+YKPR SQFIV +NKY+EA+   F +G RF+MRFEGEESPER F
Sbjct: 251 LATASHAVRTTTIFVVFYKPRISQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIF 310

Query: 306 SGTIVGVDDISPHWPNSKWQSLRIQWDELASIPRPDRVSPWEIEPFVAPTSPSIP-QSVS 365
           +GTIVG  D+S  WP SKW+SL++QWDE  ++ RPD+VSPWEIEPF+A +  S P Q   
Sbjct: 311 TGTIVGSGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQ 370

Query: 366 VKNKRLRPPLDIPDSDNSTVTTLRHPGSTQSHDDRAQLSIAASEMKRFENHATWNYKQTD 425
            K KR RP                                                    
Sbjct: 371 SKCKRSRP---------------------------------------------------- 430

Query: 426 VSSIGNSVSRTPKEGSWLAS-PNGSVSQHRLQNLTDDRNSSYVWSTVFSGAPVAQSTCRA 485
              I  SV +TP   S+L S P    S +    L  D +   +     SG   + ++ + 
Sbjct: 431 ---IEPSV-KTPAPPSFLYSLPQSQDSINASLKLFQDPSLERI-----SGGYSSNNSFKP 490

Query: 486 PHPSNPKSSDQVNDLGEKGRKTEVAPSCRLFGIDIIGHSKSPVPPEMAADQPISAPNEIT 545
             P  P +                  S RLFG D+  +S +P+P +              
Sbjct: 491 ETPPPPTNC-----------------SYRLFGFDLTSNSPAPIPQD-------------- 550

Query: 546 DAEQNSDQPKASKERKLGLLQVPPKEIQHKQSSSTNSRSRTKVQMQGMAVGRAVDLTMLE 605
             +Q  D   A+K ++     + P  +  ++   T SRSRTKVQMQG+AVGRAVDLT+L+
Sbjct: 551 --KQPMDTCGAAKCQE----PITPTSMSEQKKQQT-SRSRTKVQMQGIAVGRAVDLTLLK 585

Query: 606 GYGQLIDELEKMFDIKGELHPRDKWEIVFTDDEGDTMLMGDYPWQEFCNMVRRIYIWSSQ 665
            Y +LIDELE+MF+I+G+L  RDKW +VFTDDEGD ML GD PW EFC M ++I+I+SS 
Sbjct: 611 SYDELIDELEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSD 585

Query: 666 DVKMMNSVSKLTMS 677
           +VK M +  K++ S
Sbjct: 671 EVKKMTTKLKISSS 585

The following BLAST results are available for this feature:

BLAST of CmaCh16G005330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XED8	1.8e-202	56.59	Auxin response factor 9 OS=Arabidopsis thaliana OX=3702 GN=ARF9 PE=1 SV=1	[more]
Q9ZPY6	5.1e-181	53.51	Auxin response factor 11 OS=Arabidopsis thaliana OX=3702 GN=ARF11 PE=2 SV=3	[more]
Q9C5W9	1.1e-175	52.82	Auxin response factor 18 OS=Arabidopsis thaliana OX=3702 GN=ARF18 PE=1 SV=1	[more]
Q6YVY0	6.3e-171	51.55	Auxin response factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF7 PE=2 SV...	[more]
Q0JCZ4	2.0e-164	49.78	Auxin response factor 9 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF9 PE=2 SV...	[more]

BLAST of CmaCh16G005330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23980.1	1.3e-203	56.59	auxin response factor 9	[more]
AT4G23980.2	2.9e-203	56.53	auxin response factor 9	[more]
AT2G46530.1	2.8e-182	53.52	auxin response factor 11	[more]
AT2G46530.3	3.6e-182	53.51	auxin response factor 11	[more]
AT3G61830.1	7.8e-177	52.82	auxin response factor 18	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 122..224 e-value: 2.5E-23 score: 93.5
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 122..222 e-value: 6.7E-22 score: 77.3
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 122..224 score: 12.209728
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 120..222 e-value: 1.12701E-21 score: 88.1536
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 559..616 e-value: 1.2E-6 score: 28.6 coord: 626..664 e-value: 6.6E-6 score: 26.2
None	No IPR available	GENE3D	2.30.30.1040		coord: 283..354 e-value: 2.6E-31 score: 108.9
None	No IPR available	GENE3D	3.10.20.90		coord: 575..668 e-value: 3.6E-31 score: 109.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..397
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 561..585
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 426..448
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 377..397
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 477..505
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 477..494
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 568..585
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..116
None	No IPR available	PANTHER	PTHR31384:SF1	AUXIN RESPONSE FACTOR 9	coord: 12..679
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 575..656
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 119..223 e-value: 2.5E-47 score: 161.0
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 113..251
IPR010525	Auxin response factor domain	PFAM	PF06507	Auxin_resp	coord: 248..326 e-value: 1.1E-30 score: 105.7
IPR044835	Auxin response factor	PANTHER	PTHR31384	AUXIN RESPONSE FACTOR 4-RELATED	coord: 12..679
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 580..661 score: 23.51841

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G005330.1	CmaCh16G005330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009725	response to hormone
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding