CmaCh16G004950 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGGCCCTGGCGATTGGCTTCAATTTTACCATCAAAATCTTCCTACCACGGCGGCGCCACCGCCTTCCGATCAATCCACCTCCGAGATGATCTTCGTCGATCGAGTTTCCGACGCCATCGCCTCCGCAAACACCGGCGCTTCCACTGGCTTGAATCCGGAACGTCGTGTAGCAAAGCCGGTTCGCCGCCGGTCCAGGACTTCTCGGCGGACTCCGACGACCTTGCTCAATACAGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACCGGCGGTCCAACTCCGCCTTTCGCCTCATCGATTTCCCCCAATTTTTCGTTAGGGTTCGGCGCGATTCCTCAATCGAATTCCGGCTTGATTTCTCCGCCGTCTGGTTATCCGCTGCAGTTTTACCATCACAACCCCCAACCGTTCGTGATTCCAGCATCCGCACACGGCGGCGAATTTCTTCAGAGGCTATCCGCCGCGAAGCCAGGAAATGGCGGAGTCGCCGCAGACGGATTTCTGATGGAAAGTGCAGTTTCTTCTCAAATTCCTCCCGCCGGAGCTTCTGCAGATTCCTCCAACAAAAGCAACGGCGGTAGTGGCGGCGGATTTCTGTTCTGA ATGTCCGGCCCTGGCGATTGGCTTCAATTTTACCATCAAAATCTTCCTACCACGGCGGCGCCACCGCCTTCCGATCAATCCACCTCCGAGATGATCTTCGTCGATCGAGTTTCCGACGCCATCGCCTCCGCAAACACCGGCGCTTCCACTGGCTTGAATCCGGAACGTCGTGTAGCAAAGCCGGTTCGCCGCCGGTCCAGGACTTCTCGGCGGACTCCGACGACCTTGCTCAATACAGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACCGGCGGTCCAACTCCGCCTTTCGCCTCATCGATTTCCCCCAATTTTTCGTTAGGGTTCGGCGCGATTCCTCAATCGAATTCCGGCTTGATTTCTCCGCCGTCTGGTTATCCGCTGCAGTTTTACCATCACAACCCCCAACCGTTCGTGATTCCAGCATCCGCACACGGCGGCGAATTTCTTCAGAGGCTATCCGCCGCGAAGCCAGGAAATGGCGGAGTCGCCGCAGACGGATTTCTGATGGAAAGTGCAGTTTCTTCTCAAATTCCTCCCGCCGGAGCTTCTGCAGATTCCTCCAACAAAAGCAACGGCGGTAGTGGCGGCGGATTTCTGTTCTGA ATGTCCGGCCCTGGCGATTGGCTTCAATTTTACCATCAAAATCTTCCTACCACGGCGGCGCCACCGCCTTCCGATCAATCCACCTCCGAGATGATCTTCGTCGATCGAGTTTCCGACGCCATCGCCTCCGCAAACACCGGCGCTTCCACTGGCTTGAATCCGGAACGTCGTGTAGCAAAGCCGGTTCGCCGCCGGTCCAGGACTTCTCGGCGGACTCCGACGACCTTGCTCAATACAGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACCGGCGGTCCAACTCCGCCTTTCGCCTCATCGATTTCCCCCAATTTTTCGTTAGGGTTCGGCGCGATTCCTCAATCGAATTCCGGCTTGATTTCTCCGCCGTCTGGTTATCCGCTGCAGTTTTACCATCACAACCCCCAACCGTTCGTGATTCCAGCATCCGCACACGGCGGCGAATTTCTTCAGAGGCTATCCGCCGCGAAGCCAGGAAATGGCGGAGTCGCCGCAGACGGATTTCTGATGGAAAGTGCAGTTTCTTCTCAAATTCCTCCCGCCGGAGCTTCTGCAGATTCCTCCAACAAAAGCAACGGCGGTAGTGGCGGCGGATTTCTGTTCTGA MSGPGDWLQFYHQNLPTTAAPPPSDQSTSEMIFVDRVSDAIASANTGASTGLNPERRVAKPVRRRSRTSRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQSNSGLISPPSGYPLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGGVAADGFLMESAVSSQIPPAGASADSSNKSNGGSGGGFLF Homology
BLAST of CmaCh16G004950 vs. ExPASy Swiss-Prot
Match: Q9LIE6 (VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 8.4e-15 Identity = 61/140 (43.57%), Postives = 78/140 (55.71%), Query Frame = 0
BLAST of CmaCh16G004950 vs. TAIR 10
Match: AT4G15120.1 (VQ motif-containing protein ) HSP 1 Score: 82.8 bits (203), Expect = 3.5e-16 Identity = 78/202 (38.61%), Postives = 94/202 (46.53%), Query Frame = 0
BLAST of CmaCh16G004950 vs. TAIR 10
Match: AT3G22160.1 (VQ motif-containing protein ) HSP 1 Score: 82.0 bits (201), Expect = 5.9e-16 Identity = 61/140 (43.57%), Postives = 78/140 (55.71%), Query Frame = 0
BLAST of CmaCh16G004950 vs. TAIR 10
Match: AT4G39720.1 (VQ motif-containing protein ) HSP 1 Score: 61.6 bits (148), Expect = 8.3e-10 Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = 0
BLAST of CmaCh16G004950 vs. TAIR 10
Match: AT5G65170.1 (VQ motif-containing protein ) HSP 1 Score: 57.0 bits (136), Expect = 2.0e-08 Identity = 57/153 (37.25%), Postives = 71/153 (46.41%), Query Frame = 0
BLAST of CmaCh16G004950 vs. TAIR 10
Match: AT1G35830.1 (VQ motif-containing protein ) HSP 1 Score: 56.6 bits (135), Expect = 2.7e-08 Identity = 38/95 (40.00%), Postives = 50/95 (52.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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