CmaCh16G004260 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G004260
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	B-box zinc finger protein 22
Location	Cma_Chr16: 2125173 .. 2128774 (-)
RNA-Seq Expression	CmaCh16G004260
Synteny	CmaCh16G004260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCAGAGGTGAAACGTGGACAAAAATGGAGGAAGGAATTGATATCAAAATATCAGTACTGAGTTCACACTTCGAATCACAAATCAAATCCCCTTCTTAAACCTCTCTCAACTTGATCCACTTGATCCCCAAGGAACCTTATTCCTTCTCCATTGTTCTTCCGACAAATTTTCTTTCAAATTCCGAGGGATTTTTCAGAGCTTGAAGGGGCTGTGATTCTCCTCAAACTAGGTAGGAGGGGAAGTTGTTCTTCTTTTTTTTCTTGTTTTCTGGGCTTTTTCGACGGGGATTCAGTGATGATGAATAGGTTTTAGAGGATTCGAGAGAAAGTGAGATTTTCTTCGGTGAAAGAGTATGAAGATTCAGTGCAACGTCTGCGAGATGGCTGAGGCCACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCTTGCGATGAGAAGATTCATGCGGCCAACAAGCTTGCAAGCAAGCACCAGAGAGTTCCTCTCTCTGATTCTTCGTCTCAGATGCCCAAATGCGACATCTGCCAGGTATGTGCTGTAATTAGCTACTCTCTGTTACAAGCAAGCACCAGGGAGATGTGATGTGGAATCAACCTTTTGTGTTCATACTTAGTGGAGATTAAAGCTTCTATGATAATTTTTTTATTGTGTTACCATGAAATGAGTTCCATAGGCTGAAATAGAATGATTTCATATCCACCCAAGATAAAAGATCAAGGAATACTTGAATCTGTTGCCAAATCTCACGAGCTTCACCATGTTTTTCTTTAAAATTTCTTCTAGATTTCTGTTTCCAGATCTACTGACAAAGGAAAGAAAAGTAGGTTCCATCTCGAGATGTAGCTGTGGGCAGTTTTAGAAGTTTGAAATGCTGGCAGATAGATTTTGAATAGTTGTACAGGCGATAAATGTTTTCTAATCTAGTAAAACAGGAAAGAGTGCCTGATATTTAGATCAGTGAGTATATGGGGAAGAGATTATGATAAGTGAATTAGCCTGCAGAAAAAACCAAGATATGGATTGATGGTATGTGCAATTGGTGATGCTGTCATGTGTAGCATGCCGGCTTTAGTAAGTGATGATTATTAGTGTGTAGCAGCCCAAGTCTACCACTAGCAGAAATTGTCTTCTTTGGACTTTCTCTTTCAGATTTCCCTCAAGGTTTTCAAAATGCGTGTAAGGAGAGGTTTCCACACCCTTATAAGAAATGCTTCGTTCCCCTCTCCAATCGATGTGGGATCTCACAATCCACCCCCTTAGGGGCCAAACGTCCTCACTGGCACATCACCTAATGTCTGGCTTTGATACCATTTGTAACAGCCTAAGCTCACCACTAGCAGATATTGTCCTCTTTGTGTTCCCTTTCTGTCTTCCCCTCAAGATTTTTAAAACGGCGTCTGCTAGCGAGAGGTTTCACACTCTTATAAGAAATATTTCGTTCCCCTCTCCCACCACTAGCAGATATTGTCCTCTTTGGGTTTTTCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGCATTTGTTAGCAAGAGGTTTCCATACCCTTATAAAGAATGTTTTGTTCCCCTCTCCAATCAATGGGGATTTTAAGAAACAGGCATAACCCATCTTATCTATCTTGTGCATGCTTTCGTAGTATATTGTTATGCGTTGTTGGGAGAATGTCAGCCGATGGCGAGTTTCCTTTCTTTTCTTTTTTTTCAATACCCTTTATCAGTTGAGACTGTTACCCTTTCTTAATCATCTGTGATTTCTTGCAGGAAGCTAGTGGCTATATCTTTTGTTTAGAGGATCGAGCATTACTTTGCAGAAAGTGTGATGTTGCTATACACACAGCAAATACTTATGTAACTGGTCATCAGCGCTTTCTGCTTACTGGGGTGAAAGTGGCGCTTGAGCCAACTGATCCTGTTCCTTGTTCTTCCATGCCTAAGTCACATTCTCAAGTGAAACCTACTGAGACAAAAGTTAGACCTCTGTCTGAAAGGGAATTCTCGTTGCCTTCTCCTGGTGAACTCAGCAGATGCCTGTCTGTACAAGGTGGATCTGAGGACTTCATGGCAAATGGAACGTTCCATACCGGAGATACTGTTTCTGGTGGCTTTTCACAATGGCAAATGGATGACCTTATTAATCTGACTGGATTCAATCAGAACTATGGGTTTTTGGATAACGGATCATCCAAGGTATGGTCATGGTTTTCTAATGCAATAAATTCAAAATAATGACAACCCCATTAATTGTTTATGATTACAGAATAATGACCGTTCATAGAAGTTGATAATGCTTGTTGCTTCTGGGATTTAAAGATCTTTCTATTGCTAGGATGCCTCTCACGTAGCAAACCTCTTTTATAAGTAAACGTATAGTGTAGCCTGGATACTTTCTCCTTAACGGTGTAATTATAACCGTTCAAGTCCACCACTAGTAGATATTGTCTACTTTAGCCCGTTACGTATGTCAGCCTCATGGTTTTAAAACGCATCTACTAGGGAGAAGTTTTCACCCTCTGGTAAGAAATGTTTTGTTCTCCTCTCCAACCGACATGGGATCTCATAATTCACCCCAGCGTTCTCGTTGGCACACTGGCTCCGATATCATTTGTTGTCCAAACTCACCACTAGTAGATATTGTCCGCTTTAGCCCGTTACGTATTGCTGTCACCTCACGGTTTTGAAATGCCTCTATTAGGGAGAAGTTTCCACACCCTTAAAAAAAGAAATGTTTCATTTTCCTTTCCAACTGATATGAGATCTCAGTAATCATATCTTTTGTATAGGGATATTCTACCTAAGTAATCATATCTTTTGTTTAGGGATATTCTACCCAAGTAATTAATTGATGACCTATAAGATGTAACTTTTGTAGGACGTTTGTACATTGTTATGGGTTGTGGCCAAGTACTGCTAATCCTGATGCAATAACTTTCTGCTTTTCTTTATTGGTGACATATAGCAGGCTGATAGCGGCAAGCTCGGGGATTCTGATTCATCTCCAGTTTTAAGGGCTGCTGACATTGAGCTAGACGACAACGATGAATGCTCGGGTCAGGTTCCAGAGGCTTCCTGGACTGTGCCTCAGATTCCCTCCCCTCCCACAGCATCTGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTTTGTTCCTGACATTTCCTGTTCTTCCGAAAAGGTTCAACATTGCTCATTTAATGGTAGATTCTTGAAACGAAGGAGGCAGTTCTAGACGTCCAAGCTCGATCATAGGGACTTCAATGCAAGTGTTCTGAACCTCGCTAGGTTTGCTGTGTGTTTATAGCTTTCATTTACAGTCGAATTATAATAAGTGGACACGATCAAAGATTATCGCTTGAAACGTATACCTTGTAACGTAACCACTATAGTTTAGGATTTGTTACATTGATGTAGAAATAAAACCTGCGCCATTAGTTGACCTTGTAGGTATTTTTTTTCAGATTTATTTCAAACATCTTGTGGAAATGATCGTTTCAAATCACCTTGACCTACTTGATTGATTATTGTAGTTTTACAAAAAGATTATGAAGAATCAATGTCATGTCTTAGCCATTTTTAGTTCAG

mRNA sequence

GATCAGAGGTGAAACGTGGACAAAAATGGAGGAAGGAATTGATATCAAAATATCAGTACTGAGTTCACACTTCGAATCACAAATCAAATCCCCTTCTTAAACCTCTCTCAACTTGATCCACTTGATCCCCAAGGAACCTTATTCCTTCTCCATTGTTCTTCCGACAAATTTTCTTTCAAATTCCGAGGGATTTTTCAGAGCTTGAAGGGGCTGTGATTCTCCTCAAACTAGGTAGGAGGGGAAGTTGTTCTTCTTTTTTTTCTTGTTTTCTGGGCTTTTTCGACGGGGATTCAGTGATGATGAATAGGTTTTAGAGGATTCGAGAGAAAGTGAGATTTTCTTCGGTGAAAGAGTATGAAGATTCAGTGCAACGTCTGCGAGATGGCTGAGGCCACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCTTGCGATGAGAAGATTCATGCGGCCAACAAGCTTGCAAGCAAGCACCAGAGAGTTCCTCTCTCTGATTCTTCGTCTCAGATGCCCAAATGCGACATCTGCCAGGAAGCTAGTGGCTATATCTTTTGTTTAGAGGATCGAGCATTACTTTGCAGAAAGTGTGATGTTGCTATACACACAGCAAATACTTATGTAACTGGTCATCAGCGCTTTCTGCTTACTGGGGTGAAAGTGGCGCTTGAGCCAACTGATCCTGTTCCTTGTTCTTCCATGCCTAAGTCACATTCTCAAGTGAAACCTACTGAGACAAAAGTTAGACCTCTGTCTGAAAGGGAATTCTCGTTGCCTTCTCCTGGTGAACTCAGCAGATGCCTGTCTGTACAAGGTGGATCTGAGGACTTCATGGCAAATGGAACGTTCCATACCGGAGATACTGTTTCTGGTGGCTTTTCACAATGGCAAATGGATGACCTTATTAATCTGACTGGATTCAATCAGAACTATGGGTTTTTGGATAACGGATCATCCAAGGCTGATAGCGGCAAGCTCGGGGATTCTGATTCATCTCCAGTTTTAAGGGCTGCTGACATTGAGCTAGACGACAACGATGAATGCTCGGGTCAGGTTCCAGAGGCTTCCTGGACTGTGCCTCAGATTCCCTCCCCTCCCACAGCATCTGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTTTGTTCCTGACATTTCCTGTTCTTCCGAAAAGGTTCAACATTGCTCATTTAATGGTAGATTCTTGAAACGAAGGAGGCAGTTCTAGACGTCCAAGCTCGATCATAGGGACTTCAATGCAAGTGTTCTGAACCTCGCTAGGTTTGCTGTGTGTTTATAGCTTTCATTTACAGTCGAATTATAATAAGTGGACACGATCAAAGATTATCGCTTGAAACGTATACCTTGTAACGTAACCACTATAGTTTAGGATTTGTTACATTGATGTAGAAATAAAACCTGCGCCATTAGTTGACCTTGTAGGTATTTTTTTTCAGATTTATTTCAAACATCTTGTGGAAATGATCGTTTCAAATCACCTTGACCTACTTGATTGATTATTGTAGTTTTACAAAAAGATTATGAAGAATCAATGTCATGTCTTAGCCATTTTTAGTTCAG

Coding sequence (CDS)

ATGAAGATTCAGTGCAACGTCTGCGAGATGGCTGAGGCCACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCTTGCGATGAGAAGATTCATGCGGCCAACAAGCTTGCAAGCAAGCACCAGAGAGTTCCTCTCTCTGATTCTTCGTCTCAGATGCCCAAATGCGACATCTGCCAGGAAGCTAGTGGCTATATCTTTTGTTTAGAGGATCGAGCATTACTTTGCAGAAAGTGTGATGTTGCTATACACACAGCAAATACTTATGTAACTGGTCATCAGCGCTTTCTGCTTACTGGGGTGAAAGTGGCGCTTGAGCCAACTGATCCTGTTCCTTGTTCTTCCATGCCTAAGTCACATTCTCAAGTGAAACCTACTGAGACAAAAGTTAGACCTCTGTCTGAAAGGGAATTCTCGTTGCCTTCTCCTGGTGAACTCAGCAGATGCCTGTCTGTACAAGGTGGATCTGAGGACTTCATGGCAAATGGAACGTTCCATACCGGAGATACTGTTTCTGGTGGCTTTTCACAATGGCAAATGGATGACCTTATTAATCTGACTGGATTCAATCAGAACTATGGGTTTTTGGATAACGGATCATCCAAGGCTGATAGCGGCAAGCTCGGGGATTCTGATTCATCTCCAGTTTTAAGGGCTGCTGACATTGAGCTAGACGACAACGATGAATGCTCGGGTCAGGTTCCAGAGGCTTCCTGGACTGTGCCTCAGATTCCCTCCCCTCCCACAGCATCTGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTTTGTTCCTGACATTTCCTGTTCTTCCGAAAAGGTTCAACATTGCTCATTTAATGGTAGATTCTTGAAACGAAGGAGGCAGTTCTAG

Protein sequence

MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSDSSSQMPKCDICQEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPTDPVPCSSMPKSHSQVKPTETKVRPLSEREFSLPSPGELSRCLSVQGGSEDFMANGTFHTGDTVSGGFSQWQMDDLINLTGFNQNYGFLDNGSSKADSGKLGDSDSSPVLRAADIELDDNDECSGQVPEASWTVPQIPSPPTASGLYWPRSYHNSMDGAVFVPDISCSSEKVQHCSFNGRFLKRRRQF

Homology

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BLAST of CmaCh16G004260 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 293.5 bits (750), Expect = 2.7e-78
Identity = 166/311 (53.38%), Postives = 211/311 (67.85%), Query Frame = 0


Query: 1   MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSDSSSQMPKCDIC 60
           MKIQCNVCE AEATVLCCADEAALCWACDEKIHAANKLA KHQRVPLS S+S +PKCDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  QEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPTDPVPCSSMPKS 120
           QEASG+ FCL+DRALLCRKCDVAIHT N +V+ HQRFLLTG+KV LE  D  P +    +
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPT 120

Query: 121 HSQVKPTETKVRPLSEREFSLPSPGELS---RCLSVQGGSEDFMANGT-----------F 180
           +   K  ETK  P  +   S+P P +++        Q   ++ +  GT            
Sbjct: 121 NDD-KTMETK--PFVQ---SIPEPQKMAFDHHHHQQQQEQQEGVIPGTKVNDQTSTKLPL 180

Query: 181 HTGDTVSGGFSQWQMDDLINLTGFNQNYGFLD-NGSSKADSGKLGDSDSSPVLRAADIEL 240
            +  + +G   QWQ++++  LT F+Q+Y +++ NGSSKAD+ + GDSDSS ++R+A+ + 
Sbjct: 181 VSSGSTTGSIPQWQIEEIFGLTDFDQSYEYMENNGSSKADTSRRGDSDSSSMMRSAEEDG 240

Query: 241 DDNDECSGQVPEASWTVPQIPSPPTASGLYWPRSYHNSMDGAVFVPDISCSSEKVQHCSF 297
           +DN+ C G   E SW VPQI SPPTASGL WP+ +H+    +VFVPDI+ SS      S 
Sbjct: 241 EDNNNCLG--GETSWAVPQIQSPPTASGLNWPKHFHHH---SVFVPDIT-SSTPYTGSSP 299

[Close]

BLAST of CmaCh16G004260 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.9e-37
Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 0


Query: 1   MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSDSSSQMPKCDIC 60
           MKIQC+VCE A ATV+CCADEAALC  CD +IHAANKLASKHQR+ L+  S++ P+CDIC
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61  QEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPT---DPVPCSSM 120
           QE + +IFC+EDRALLCR CD +IH AN+    HQRFL TG+KVAL  T     +  +  
Sbjct: 61  QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP 120

Query: 121 PKSHSQVKPTETKVRPLSERE 139
             S++Q K  +   +  S+++
Sbjct: 121 EPSNNQQKANQIPAKSTSQQQ 141

[Close]

BLAST of CmaCh16G004260 vs. ExPASy Swiss-Prot
Match: Q9SID1 (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 3.6e-35
Identity = 77/145 (53.10%), Postives = 100/145 (68.97%), Query Frame = 0


Query: 1   MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSDSSSQMPKCDIC 60
           MKIQC+VCE A AT++CCADEAALC  CD ++HAANKLASKHQR+ L   S++ P CDIC
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60

Query: 61  QEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPTDPVPCS-SMPK 120
            E + +IFC+EDRALLCR CD A H  NT    HQRFL TG++VAL  T    C+  + K
Sbjct: 61  LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTS---CNQEVEK 120

Query: 121 SHSQVKPTETKVRPLSEREFSLPSP 145
           +H      ++  +P +++  + PSP
Sbjct: 121 NHFDPSNQQSLSKPPTQQP-AAPSP 141

[Close]

BLAST of CmaCh16G004260 vs. ExPASy Swiss-Prot
Match: O82617 (B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.6e-30
Identity = 76/155 (49.03%), Postives = 96/155 (61.94%), Query Frame = 0


Query: 1   MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPL------SDSSSQM 60
           MKIQC VCE AEA VLCC+DEA LC  CD K+H ANKL  +H RV L      + ++S  
Sbjct: 1   MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60

Query: 61  PKCDICQEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEP-TDPVP 120
           P CDICQE  GY FCLEDRA+LC  CD AIHT N+    HQRFLL+GV+V+ +  T+   
Sbjct: 61  PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCNS----HQRFLLSGVQVSDQSLTENSE 120

Query: 121 CSSMPKSHS-QVKPTETKVRPLSEREFSLPSPGEL 148
           CS+   S + Q++   +     S  E    + GE+
Sbjct: 121 CSTSFSSETYQIQSKVSLNSQYSSEETEAGNSGEI 151

[Close]

BLAST of CmaCh16G004260 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-29
Identity = 91/242 (37.60%), Postives = 123/242 (50.83%), Query Frame = 0


Query: 1   MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPL---SDSSSQMPKC 60
           MKI+C+VC+  EA+V C ADEA+LC  CD ++H ANKLASKH R  L   S S++  P C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICQEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPTDPVPCSSM 120
           DICQ+    +FC +DRA+LC+ CD +IH AN +   H RFLLTGVK++   +   P S  
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 PKSHSQVKPTETKVRPLSEREFSLP-----SPGELSRCLSVQGGSEDFMANGTFHTGDTV 180
             S S            S ++FS+P     +P  L + LS    S         + GD  
Sbjct: 121 SSSSS------------SNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGD-- 180

Query: 181 SGGFSQWQMDDLIN------LTGFNQNYGFLDNGSSKADSGKLGDSDSSPVLRAADIELD 229
               +QW     I+      L G++    FLD+        K GD D   VL   + E D
Sbjct: 181 -ASVNQWGSTSTISEYLMDTLPGWHVE-DFLDSSLPTYGFSKSGDDDG--VLPYMEPEDD 224

[Close]

BLAST of CmaCh16G004260 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 )

HSP 1 Score: 293.5 bits (750), Expect = 1.9e-79
Identity = 166/311 (53.38%), Postives = 211/311 (67.85%), Query Frame = 0


Query: 1   MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSDSSSQMPKCDIC 60
           MKIQCNVCE AEATVLCCADEAALCWACDEKIHAANKLA KHQRVPLS S+S +PKCDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  QEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPTDPVPCSSMPKS 120
           QEASG+ FCL+DRALLCRKCDVAIHT N +V+ HQRFLLTG+KV LE  D  P +    +
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPT 120

Query: 121 HSQVKPTETKVRPLSEREFSLPSPGELS---RCLSVQGGSEDFMANGT-----------F 180
           +   K  ETK  P  +   S+P P +++        Q   ++ +  GT            
Sbjct: 121 NDD-KTMETK--PFVQ---SIPEPQKMAFDHHHHQQQQEQQEGVIPGTKVNDQTSTKLPL 180

Query: 181 HTGDTVSGGFSQWQMDDLINLTGFNQNYGFLD-NGSSKADSGKLGDSDSSPVLRAADIEL 240
            +  + +G   QWQ++++  LT F+Q+Y +++ NGSSKAD+ + GDSDSS ++R+A+ + 
Sbjct: 181 VSSGSTTGSIPQWQIEEIFGLTDFDQSYEYMENNGSSKADTSRRGDSDSSSMMRSAEEDG 240

Query: 241 DDNDECSGQVPEASWTVPQIPSPPTASGLYWPRSYHNSMDGAVFVPDISCSSEKVQHCSF 297
           +DN+ C G   E SW VPQI SPPTASGL WP+ +H+    +VFVPDI+ SS      S 
Sbjct: 241 EDNNNCLG--GETSWAVPQIQSPPTASGLNWPKHFHHH---SVFVPDIT-SSTPYTGSSP 299

[Close]

BLAST of CmaCh16G004260 vs. TAIR 10
Match: AT1G78600.2 (light-regulated zinc finger protein 1 )

HSP 1 Score: 282.0 bits (720), Expect = 5.7e-76
Identity = 164/331 (49.55%), Postives = 209/331 (63.14%), Query Frame = 0


Query: 1   MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSDSSSQMPKCDIC 60
           MKIQCNVCE AEATVLCCADEAALCWACDEKIHAANKLA KHQRVPLS S+S +PKCDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  QEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPTDPVPCSSMPKS 120
           QEASG+ FCL+DRALLCRKCDVAIHT N +V+ HQRFLLTG+KV LE  D  P +    +
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPT 120

Query: 121 HSQVKPTETKVRPLSEREFSLPSPGELS---RCLSVQGGSEDFMANGT-----------F 180
           +   K  ETK  P  +   S+P P +++        Q   ++ +  GT            
Sbjct: 121 NDD-KTMETK--PFVQ---SIPEPQKMAFDHHHHQQQQEQQEGVIPGTKVNDQTSTKLPL 180

Query: 181 HTGDTVSGGFSQWQMDDLINLTGFNQNYGFLDNGSS---------------------KAD 240
            +  + +G   QWQ++++  LT F+Q+Y +++N  S                     KAD
Sbjct: 181 VSSGSTTGSIPQWQIEEIFGLTDFDQSYEYMENNGSSKTDVLKMKLLDSACLGKKLEKAD 240

Query: 241 SGKLGDSDSSPVLRAADIELDDNDECSGQVPEASWTVPQIPSPPTASGLYWPRSYHNSMD 297
           + + GDSDSS ++R+A+ + +DN+ C G   E SW VPQI SPPTASGL WP+ +H+   
Sbjct: 241 TSRRGDSDSSSMMRSAEEDGEDNNNCLG--GETSWAVPQIQSPPTASGLNWPKHFHHH-- 300

[Close]

BLAST of CmaCh16G004260 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein )

HSP 1 Score: 156.8 bits (395), Expect = 2.8e-38
Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 0


Query: 1   MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSDSSSQMPKCDIC 60
           MKIQC+VCE A ATV+CCADEAALC  CD +IHAANKLASKHQR+ L+  S++ P+CDIC
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61  QEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPT---DPVPCSSM 120
           QE + +IFC+EDRALLCR CD +IH AN+    HQRFL TG+KVAL  T     +  +  
Sbjct: 61  QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP 120

Query: 121 PKSHSQVKPTETKVRPLSERE 139
             S++Q K  +   +  S+++
Sbjct: 121 EPSNNQQKANQIPAKSTSQQQ 141

[Close]

BLAST of CmaCh16G004260 vs. TAIR 10
Match: AT1G06040.1 (B-box zinc finger family protein )

HSP 1 Score: 156.8 bits (395), Expect = 2.8e-38
Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 0


Query: 1   MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSDSSSQMPKCDIC 60
           MKIQC+VCE A ATV+CCADEAALC  CD +IHAANKLASKHQR+ L+  S++ P+CDIC
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61  QEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPT---DPVPCSSM 120
           QE + +IFC+EDRALLCR CD +IH AN+    HQRFL TG+KVAL  T     +  +  
Sbjct: 61  QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP 120

Query: 121 PKSHSQVKPTETKVRPLSERE 139
             S++Q K  +   +  S+++
Sbjct: 121 EPSNNQQKANQIPAKSTSQQQ 141

[Close]

BLAST of CmaCh16G004260 vs. TAIR 10
Match: AT2G31380.1 (salt tolerance homologue )

HSP 1 Score: 150.2 bits (378), Expect = 2.6e-36
Identity = 77/145 (53.10%), Postives = 100/145 (68.97%), Query Frame = 0


Query: 1   MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSDSSSQMPKCDIC 60
           MKIQC+VCE A AT++CCADEAALC  CD ++HAANKLASKHQR+ L   S++ P CDIC
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60

Query: 61  QEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPTDPVPCS-SMPK 120
            E + +IFC+EDRALLCR CD A H  NT    HQRFL TG++VAL  T    C+  + K
Sbjct: 61  LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTS---CNQEVEK 120

Query: 121 SHSQVKPTETKVRPLSEREFSLPSP 145
           +H      ++  +P +++  + PSP
Sbjct: 121 NHFDPSNQQSLSKPPTQQP-AAPSP 141

The following BLAST results are available for this feature:

BLAST of CmaCh16G004260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYM2	2.7e-78	53.38	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]
Q96288	3.9e-37	55.32	B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1	[more]
Q9SID1	3.6e-35	53.10	B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2	[more]
O82617	4.6e-30	49.03	B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1	[more]
Q9LQZ7	1.8e-29	37.60	B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1	[more]

BLAST of CmaCh16G004260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78600.1	1.9e-79	53.38	light-regulated zinc finger protein 1	[more]
AT1G78600.2	5.7e-76	49.55	light-regulated zinc finger protein 1	[more]
AT1G06040.2	2.8e-38	55.32	B-box zinc finger family protein	[more]
AT1G06040.1	2.8e-38	55.32	B-box zinc finger family protein	[more]
AT2G31380.1	2.6e-36	53.10	salt tolerance homologue	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 4..47 e-value: 5.3E-10 score: 49.2 coord: 52..99 e-value: 7.2E-16 score: 68.7
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 53..95 e-value: 3.5E-7 score: 30.3 coord: 4..47 e-value: 2.9E-5 score: 24.1
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 52..99 score: 9.385208
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..47 score: 10.423589
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 1..92 e-value: 2.3E-8 score: 36.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..145
None	No IPR available	PANTHER	PTHR31832:SF57	B-BOX ZINC FINGER PROTEIN 18	coord: 1..295
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 1..295
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 5..47 e-value: 1.69754E-18 score: 75.4119
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 56..99 e-value: 1.43162E-12 score: 59.2335

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G004260.1	CmaCh16G004260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding