CmaCh16G004190 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G004190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	tRNA dimethylallyltransferase 9
Location	Cma_Chr16: 2095194 .. 2106328 (-)
RNA-Seq Expression	CmaCh16G004190
Synteny	CmaCh16G004190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACAATAATCAAATGGAAGCAGCAAACTCTTAATTTTGATTTGAATTCCTTTCTATTCCTCCCTTTGACCTCACTGCAAGTAGATGATGGAATTTGGACTTTTCATCTTGCCAACAAGGTACTTTCTTATTTCTAGTCTTTTAGAATATTACATCACAGATATCTATTAGAAAAAGTGAACCTACGATCTTGAAGAAGTCAAAAAAGCCTTATCCGCTCAAGTTCTCCTATTTATCTTGAGAGTTCTTTGCCTTTGATGTTTTGGTTGAAACCTATCAAAGATTTTGATGGTTTCTTAACAAGTAAGCATACAAAATTTCATTCCATGTATCGGGAACTCCTGGTAAACACCAATGGATGCAATCTGCAAAAATTTTTGGATCGGATCTCTGTTGTTTGGTCAAAAGCTTGCCTCGACGCTCCCCGTAAATTGACGTATGTGCATCCTTTCGAAACTCTGATAGCTGTGTAATGTTTAATATAGTTACATCTACTTTGAGATTCTGTATAGTATCATGAATTGTTTCCATAATCTCTGTGCTAGAACCAGTGCCCCAGTGTGGATGGTGCATTGGTTGAGTTTCGTTGAAGCAGTTCTCATCACTTCCTGGCCTCCATTCCCAGCTCCTACAAGAGATAAGTTGCTTTCTTTCATATTTAGTGACCATTTAAACTGAGATGGAACGAATTTAAGCAAGGTTATGAAGAAAAGAAACTTCATAAAGAACTTGGGAGCCTTGTTTTTACTACCCTTATGAGTTGTAAATGGTTGAAAAGGTCAGGAAAGCATTTAGAGTGAAACCCACCACAAATGTGTTGGAGACATTGTCATGAAGAAGACGTTTTGAGACTTTGGGTTGATGTTGGATTCTAGCCAATTTGCCCATGTTTCCATTGCCAATCTGTATGCAGTGCTCACATTATACTCTTTTACATCCTCTGGAGATCCATACCTTAAAAGAAGGAAACACACAATCAATCTCAAGGACTTTCATTAAATCACAAAAGTCACATTAGATAACTTCAAAGAATTTTGGCATGTTTCACTCCCGAACATGTCCTTCTTTTGGTCGCTCTCGTTAAGAATACTGAAAGATAAATATTGATTGATTGGACAATGATGTGATGTCAGATGGAATTAGTAGAAGTAGATTGCTAGACAAAATTGAGTTAGTTCGAAAACATTGATTAAAAAGGAGGGTATATTGGTCATACTACGTAGAATCACGACTCATTGTTTATGCGTAAGTTAAAATATTAGGGACTAAATGAGTTCGACTTCCCAAGTTTAGGGACTAGCCAACCAGGAAACTTTAGGAAAAGAATACATACGTCGCATTGATCACGGGTTTGTATCTCCACCAGACATAGCTCTCAAACACCAAAACATCAACCCCTTTCCAGTGCTTGCCATGGTTAGCTATGGAGTCGAGCTTCACCATTCTTTTCAACACTGTATGGTTGGTTGCATGATCAGAAATCGACTCAACTATAAACGGTGCCCAGTAGTACTCGATGGATACATTGTAATCCTGAATCGACAAATCCAAAACGTGAGTATTCGAATTCTGAAACGATCGATATTCTGTTTGGTTCTAGTTTCAAAATGGAAGTATATTGTTCTTCCTTTTTATTATAAGAATGTTAGAACTTTTATGATGGATAGGTATGCACTTTTCACAGCTTTGAGCCTTTGAGGTACCTCAACTTTGAAGATCTTCCTGGGAGGAACTCTTTGAAGGGATTTCTTTCCTTTGGGAATGGCTGATTGAACCAAGCAGACCATTGATTCAAATTGCCCTCTCTGAATTGAGTCCCCAACAAACATTATTCTTTTGTCCCTCAAAATATCCAACAGCTTCAATGGATCAAACCTGAAACCGTCCCAAATACCATTATAATCTCGACTATAAGGTCGGAGACTAGAATCCCGAGTCAGGATCGAAAGAAGTAAACAAATTGCGATACCTCGGTAAATTGCAAGAATTAGGCTGCCATCTCCACTTCTTATAGAAAGAATCAGGTCTTCCATTCTTTTGGCAAGTAACTTGTTTAACTAGATATGGGCATGTCTCTTCTTCATAAAGAGGGTATGATGCATTATCCCATTCCCATTTCCCGTCGAACAAATTGCAGTCTTCATCTATGAGATCCTTTGAAGAAACAACAATAGGTAGTCGGTGACGGGTTTCGCTTCTCGGTCGGCCGTACATCTTGAAGACAAAGCTTCCATGACTCTTGAGATCATCTAAGACTAGCCGAGCGAGTCCTAAGATGAGAAAAGCTGCCAATGCTAACGGAAAGGCGGAATGAATTTGTCGATCGAACGAGAGTTGTTTCAGCATTTTCTTTTGTTGGTGATGAGTTTATTTTCTTTACTATTGTTGGACATTGAGTTTATTGGGAAGTTATTGAATTCTTGATAATATCTTTAGTTTGAAGTATCCTTTCTCTATTTGTGCAACCACCAGTTGGTGGAATGTTGGTGGTAGTTTCATGCATTGCAAAGCTATGTTTTTTTCCATCTCGAGTTCGATATCGGTCTTGTGTTCGATATCGGCATAAAGAGTGAATCAATATTTCAATATACTGTAAAAGAGAATCCAATGAAATATTTAAAAAGATAGCTGTAAAATTTAATTCATGTGATTATAATGTTAGTAATAAGTAGTATACAATGTTAATTTTTTAGTTTAAATATATATTTTAAAATTCTTGTTTCTAAAATCTGTCTACATTGATATCGATATTTCATCGATGTTTCTAGACATTTATATTGGTATGTTCAACCTTGATTTTAATCGATTGAGTTGTTCTAATATTGTTCATAGATCTTTTTGTTAGATAAAATGTCGAGCTTCTTAAAATGATTATCGGGTTGTTTTGGAGACCTTTATTTTGCTTTACTCTTAAATTTTCAATTTTATTAATCAAACTTTGAAAAAGGATAGGATTTATTTTGTTTAATCCGAACAATGATTTTTTTAATGGGTTAAATATAAAATCTAATAAAAGCAGAGTTGAGGTGTTCATTATATGACTCGATAACTCAACGAGTATAAATTTTTTTTCAATGTGAATTAAGTTGAATTTTTTGAAAAACAAAAATTGAAGTCGGTTCACGAGTTGGTATTTTTTTCTTTGTTGGGTTAACTCGACCAACTCAAAAATAGGGTCACAATCGAATATAACCTATCATATTTCTAAGATTATTGTAAAAATTAAAATTTATTTAACATTGATAAGCAATATTAGTGATACATTGTGATTTGTGAATGTTTGATATATGAGCTGAAATTTAAGTTATTAATATAACACGAAGAAATATAATATTATTTAAAAAATAATAGCTGTACAACTCTATCTAACCTGAGCTAAAAATAAAGAATTTGATTGAGTTGTGAACTCTATTTAAATTGTTAAATTCTAAAAAATAGGGTTTAGGGTTTAGGCTAATGTAAGATCTGAAGAGGGAAATTTAAAACCCTAAAAAATAAAAATTGTACGCACAAAGAAAAGATTTCATTAATTCAGTAGATAAATATCTGGAAAATTAAATAAAAGAATTTGTCTGATAAAACACTTGCAGATGATGAAATTAATATATCTTCGCCGCAGAGACTCACTCCGGTAGCTGTTCTTTCGAGAATGTTGAACAATGGAGTGCGCAGCCTTCACACTTCCTGTTTGCGCTTTCCCTACTTGGCGGAGAGGCCTCTTTTCCGATCAATTTCGTACCGGGGAACTCGCCGCCGGCGACTTTTTGCGAGCTTCGGCTCTGCTTCAGCCACCGCCACTAAGGAAAGGAAGGAGAAGGTGATTGTTATATCTGGTCCGACTGGTGCTGGGAAGAGCAGGCTTGCTATGGAGCTTGCTAAGCGTCTCAATGGTGAAATTGTCAGCGCCGACTCTGTCCAGGTCAATTGACAATGTCTGTCTTTGAATGTTGCTGAGAAAATGGGAGGAAAATGAAAACGAAACTAGAATTGGACTTTAATTTCAGTTTTCTGTTTTTTCAATGGCCGTTTGAGTTCATCTAGTTGTGCAAATGAATCTAATAGCTTTGGCTCAAACAAATTTAGTCAGGTAAAGCTTTGTTTTACAGAAGATTAATGGAATTGAAGGCTGGAAAACGACTTGGTACAGCGAAGAAGATTTGAGAAACTTGGATGTAAACCAAATATTAGGATGATAGCCTGCAATACACATGTTTATCTTTGCATTTACATGTGCATAAAGCACGATACATCAATGCACGGGAATTTCAAACTTTCTAGCGTCTCTCGTTCACATATCTTTCCATATCTTTCCAAACCTGTAACAACTTTTGGTGCCACGAAATTTTTGGGAAGAAGAGAAACCAGTGCCTTCTTAGCTCTAATACTTCGAGAGAGCAACATTTCTTTTAGCTTTAAGCAATTTTCCTTGGCTTGTGTGCTGTGTATCTAGATAAGGGTTCCGTCGCTAACATGTTTTCTTATTTTGGAATTTGTATGGCTTTCACTTTGTAATGTTAATGAAACAGTTTCTTGAATGCTAATATTATTCATTCTGGTTAATTTCAGGTATATCAGGGTCTTGATATTGGATCTGCGAAGCCTTCTGCAAGGGATAGAAAGGTGACTTATATCCTACGTGCTCTAAATTTTTGCTATTAATTAGTAACTGAAGCTTGAGGAATCCTTGTCTAGTCCTCTGTTTTAAAGACGCTTAGGAATTCTACATTGAGAAGTGACGAGAGGGGAGAAGAAAAGGTGTGATTGACATAAAAGTAGAAATTGCGTTAATTCAACTATGAATAATCAAATACAAGTCGTTAAGCTGTAATTGGAATAGCATATATTGAGAATAATTGATTGCGTAGTCTCAAATCCCAAATGTAAAAATGAATCATACAGTCTTGATGTTGGAGTCCTTTTAATGGAATTGATTTGTCCATTTACCCATGTGTTTCTGATATTGATAAGTGAATCTTGATTTACTTCACATATAACTTGTCTCCTGAAGTATGCTTTATATTTTTGGGTTAAAGATAAGATTACTTTAATTATGGCTGAGTGAGATCATTTGTATTAATAATGTTAAGTGACTGTTTTAGCTAATGTAGATATACATATTTTAAATTCTGTAGTCAAGTTGATTGAATACACTTTTCATTCGATCGAGATTTCATTCTCTCTATTTTAGGAGGTTCCGCATCATCTGCTTGACATACTACGTCCATATGAAGGTATGCTTTTCACTGGCTCTGTCATCTGGGAATTTAACTCCAACGTATTTTACCATATTCGCTTGTAATGTAATTTAAATATTCAATGAACAAATTGATATTTCTTTGTGCAAGAATTTTTGAACTCATTGTTAAATTTGTCCAGAATATTCTGCTGGTCAGTTTTTTGAGGATGCGAGGCAAGCGACAAGATGTATCCTTGATAATGGCCGTGTTCCAATAGTTTCTGGTGGGACAGGATTGTATTTAAGATGGTGTGTACCATAATGGCCTTCCCTAGAATTTTTCTTTCTGTTGGTTACTATTATTGAAAATAGGATTAGCACGAAACATCTCGTCCTTAGTTAATGAATGAAACTGGAAACATGACTGTCGGTGTTAGTGGTGCTTGTGTCTTTTTCTTGCATGTAATGCTGACTTAATGCTATTAGAAGATGGACCCCCCCAGTCTGTGAAAGAACAATAGAGCATATGATGAGAATGACTGATTAGATGAACAGAAAAAAAGTATCATTGACAATGTTGAACAAGTATAATATTGTCCACCCCCCCAATGATGGTCGAATTATTCAGTAGAATAGGTTGCTCAACTTTTTGCTATTGAATATATCATACAAAAAAACATTTTGTAAAGTAGCTTTTATTTTGGGTGTGAGATCAAATGAAGGTTCATGTATGGCAAACCCAATGTTCCGAAGGCCACCCCAGACGTTGCTGTCAAAGTATATTCTGAGTTAGCTGACCTTCAGAAAAATGAAGACTGGGATGCAGCTGTGCAATTGGTTGTCAAAGCTGGTGATCCTAGAGCACAGCATTTACCTACTAATGATTGGTACCGATTGCGGCGTAGCTATGAGATTGTCAAGGTAATTTCTTGTTCTTGCCTGTTTATTTGATACTCTCTCTTTCTGGATGCTTATTCTTCTATTTGCATGATTTGCGCTAGCATGTCTTCTTTGTCTTGGTTTTGTGTGTGAACCATTGCTCAAGCAATTTCATGTTAGATTGATTCTATAGACTTGGTTTAATAGGGTACCTTCCTGCTTAATTTGGGTTGAGATAACTACATTATATGATGGGATACTTCGTGCTGTAATTTACAATATCAATCAGGAGGGTTTTCTGTGACTCTTTGGTTGCGTTCTTTGGTATTTGACCTTTATGTCTATTTCGATCTGTCATTGAAATTTGGTTTACCAAAAAAAAAAAACTAAAAATAGAAATAAATAAAGAATGAAAGAAATAAGAAGTTACGGAAGAATACAAACATATATGAGGAAAAGTAATTAATTTATTTTCTTGTGGAAAGTCCGGAATATTTAAAGGATAGAGATGAAAAGATCTTTTAAAAGATAAGACTGATGAAGTGCTGGCAGTGTGACTTAGATCATTATTCCTAGTATCTTTTTTTCTAGGCTTCTTTGACTCGGTAGTTCAAAGATCCTCCATATTTATGACTTTCCTTTTTTTTTTTTTTTTTTTTNTTATGACATAGATCTTGTTCTTTTGGATTGGAGTCCTTTTTGTAGTTAGTGCCGGGCTTCTGTTTTATTTTTTGGCTCGTTTTTTTTTCTTTACGCTCTTGAACTCTTTCATTCTTTTTCAATGAAGTTTGGTTTTTTACCTAAAAACATCAAAGGGACAACTAAAAAGACATTTCCTATTTCTTTTCGAAAATCCCTCTCAATGTAGTAAAGAAACTGTTTTCCATAAGAAGCTTCCACTTCCCCAAATATGTGGGTGTAAGAAAATCTCCTCTGGATTACTGATTACGCTGTAGCTGACCATAATGTTTTCCACAGCCTTCACCAGAAGTTTAAACTTTAAAGCAAGACAGACAAAGCTAAACATGATTATTTTCTTCCAATGATTCATGATTCACTTCCGTCAATGCCTAATTACAAAGAATAATCCAGTACAGATAAAGAGCACTGTGGAAAACCCCTAGCTGAAAGAAAAAAAAGGATTTTGAAGTTGTAATGTATTTGTCCTACCTTCTAGCTATCAATACCTTTTCTTGAATGATTTTATTTTTTTTCCAATTAGAAAATTTATAATATATTAATGTGATGTAACATTCCTTTGCAGGCAAGTGGTTTACCTCCATCTGCATTTCAAGTTCCATATGACACTTTCAGACAAGGATGTGGTTCTGGTGCAACAAGCAGCTTTCAGGATGCTGACCATTCAGTTGACTCTTCTGTTGATTCAAGTGAGGAAATTAGCTCGAAAGAGTTGGATTATGAGTTCATTTGTTTCTTCCTCTCTAGCCCAAGGCTCAATTTGTATAGGTCAATTGACTTCCGCTGTGAAGATATGATTTCAGGTGGGTGTACTATTAAAGTTAAAGTAAATAAATATAACAGAATTCCTTCTGTTGAGTTGTAGCTAGTAGTTATTTCAGTTGAAGACTTGTAATATCATGCATGATGTTCTACTTGTCTTGTGAGTGACAGAATCTTTTATTGCTCGCATTAGTAAATTGGTCAGTTTATTTTACTAAACTCCAATACTTTTCATTATCTGTAGGAAGTGATGGGATTTTATCTGAGGCAACATGGCTTCTTAATAGCGGCCTTCTTCCAGATTCAAATTCTGCCACTCGAGCTATTGGTTATAGACAAGTACATCCTGGACATCTTAATATATTTCAGTCTTTATATTTGAATATGGTGTGCGGAAGCTTTCTATTATTGTTTGTTTACTCTGACCTTTCTATTTGCAGAGATTATGTAATGAAACCGTTAAGGGTACTTCATTCTGGTTCCATTCGTTGTTAAAAAAATTATGAGCTTGGACTTGATTATATGTTAAGTAGATGTCACAAAAACTTAAGCTATTAAGTAGAATGGTTTGAATAGTATTGTACTCAATATAAACTTCAACTTTAGCAATGTGGGATTTATTTTTAATAATCGCCTTTATGCACATGGTCTTACCGAGAGTTTTAGACCTTTTTCATGTACTGGATGCGAGCACAAAGAAGCTCTATTGAGCAGAGTTTTGATATTATGTGTGCGTGTGTTGAGCTTCCCTATATTCTTTTGCCTTCTCATTGAAAATTCATTGTGGGCTTGTGGCTGTCTGCAGCTAATTCATTACCTAATAGTAATAGAAAAAAAAAAATAATGAATAAAACAAAGAAGAGAAAAGGAAAATCGACAAAATGTGACTGGAATTTCTTCTGGGGAGGATGTTCTTAGCTACGCAGCCCTGAAACAATTTGTCAGGAAGCAGCACCCCATAACTTATCTCGGTTTAAACATAGATAATATTAATTCTTGTACTTGTTAAATGGCTTTGAAGGTTCCCAAGAGAAACTGACTCTCCTAGATACAAAGTTAATACCAGCTACTATGGTAGGAACTTCCTTCGCTAATTCATGGAGACTGCAGAAGCCATTGAAAGTCTTTGTCATAACTTCTTCATATGATTTCTTTAACTTCTTTTTTTGTTTTATATCCTATAACTTCTTGATAAGTTCCATAAATTACATTGTGCAACTGTCATCTTTTTTAGCATTTATTTTGCACCTAATTTTGTTAGTTTTCCTCTTCAGTGTAGGCAAGATACGCAGCCACTAATCTATTGTGAATCATGAATTTCAGGCTATGGAGTACCTATTAAGGTGTAGGCAACAAGGTGGAAGGAGTTCTCCAGGAGAGTTCTTTGCCTTTCTCTCTGAATTTCAGAAAGCATCTAGGTAACTCCATTGTGCGTGTGAGCAAAATGGCTTTAGTTTTGAGAAAGCTATGCGTCCAAGTTGTTCTAGATTTTGAGGATATTTGTTCAGTGGACAATTAATCAACTGGCTCAATAGAAATTTCAAACTGTGTTCACAGTAAATTATATGAATTGTTTCAAGGAAAAAAAAAAGTTGGATGATTATTGTCAAATTATGAAGCCATATAACAAGATGGACTAGGTTACTCTTTTGTTTTCAAAAACCATCGGAATTGGAATAAACAATCTCCTCTTTTACGCAAATACAACACAGATCAGTCTATGCATAGATAAGGTCTTTGGCCTACAAATATTCTCTAGGGCTTAGACCTTCCAACATAACAAGCTCCTCTCCACAATACATCTTTGGGTGTTTTCCTAAAACTAAATTTGATTGAATGGAATGACTTAAGGGTAGAAAAAAGGTTGAATCCAACAGCGGCAGGAAATAGTTCTGGAATCCTTTCTTAACTAGATTACGCCTAGGTATGTGATCTGTTGAGAATTTCAAATGCGGTTACAGGCTGTTTGAACTAGCATTAGCTTTATATTTTATGGCCTTGCCCAATGGTTCTTGCTGATTCCTTGTGGGAGAAGTACTTTGAGTACAAACCATGCTTTAGTGCTATATACTCCCCTTATCTTTCTATATACTCCATATGCTTTTGCGTTTTGTTGGGTTTCAAATCGGAAACTGAAAAATCACTGTGCAGAAATTTTGCAAAAAGGCAATTGACTTGGTTTAGGAATGAGCGGATATATCACTGGCTTGATGCTTCTAAACCCCTGGTATGTTCTTTTCATTTTTTCTTCTGTTCAAACTACATTTCTTCCCCACTATGAAGAGTAGCGCTGCCAATTTTGTTCTCCACATACTCTGTATTTTACAACCTTCATTCTCAAATCTAAAAGTTGATCGCTGATGTTCTTGTTATTCACTTGATTGAATTCTGTAATCGTCTTAAACTAATTTTCTTAGTGGAACGGTTTTTATCATAGTTTCTTCATCGTGCTTAAATAATTAAGTTTCACAATACGTTCTGTTTCGGATACTAATACTAGTAAATTCTATGTACTACCATTACCTTTAAATTCCTTTAGTTCGCCTATGAAACCATGAGGACTTTGAAGTTATTGAGAAGTCTCTTACAAAAGGAAAAAGAATTAGTATTACTAAACATAGCCTTTGTTGAGAATTTTCCCTTCAGCATGGTTGTTTTTGTACAATCCTTTTATGTCAATTTCAAACTCAACCATTTACTTCTATCAACATGCTGCTTTCTTCTTCTTGTAAAATATGGTTCGGGTAGTATCATTCTATAGTCAGCATGCATTCAACCCATGACTAAACCCGTGCTTATGTAAGCAAAACATTAATGGTTCAGTGACTTGGTTTTTAATGAGCACAGGAGTAGATGAATCTCACATGGATAAATCCATTGTATTCATGTTAATGATTGAATTGTAAGGACATTTCATTATAACAATGCATCAAGAGTTGTTTAAATTACTAGTTACATGTTTATAGTTACAATTTTATGATGAAATTCTCAAGTCTGTTCTGATCAATGTGTGGGACAAAAATATTTGCAGGAAAATGCACTCAACTTTATTTATGATGCTTACCATAATGAAAGTGGAAATATCTCCGTTCCAGATTCACTTAGAATGGAGAAAGATATTTCCAGTCACCGAGAGGCTTCGGAACTCAAGGCTTATCGAGCGAAAAATAGGTACTACTTACAGTCAAGTCAATTATATCACATTTGGGCATTATTGTATCAAATCATGAAATGTGCTAATAACAGCTTCTTCACCCCCCAATTCACAGATATTTTGTTAGACGTGAAGATTGTGCTGATGTTTTGGATTGGATAAAAAGAACCCAAAGTGTTTACCAAGATAATCCTGTCGCTTGAACGAGTTCGATCTCGACCTCATTTTTTTATGCAAAGGAATCTTACTTACCAAAAAATCTTGGTAGGCCATTGACTTTACTCCTATACAATGTATTTCATTTTTCAGCTTGTTCGGTTTAAAATCGTTCTGATGCATGGATTTATCTGCAGCAGATCTCACTTAAGTTGTGCATAAGTTCAGAAGTGAGTGTTCATTTATTCTACTACCAAATGCCAGAAGTTTGATAATGCTGCTTGTCAATATCGAATCCCCCCCCC

mRNA sequence

ATGGAAACAATAATCAAATGGAAGCAGCAAACTCTTAATTTTGATTTGAATTCCTTTCTATTCCTCCCTTTGACCTCACTGCAAGTAGATGATGGAATTTGGACTTTTCATCTTGCCAACAAGAGACTCACTCCGGTAGCTGTTCTTTCGAGAATGTTGAACAATGGAGTGCGCAGCCTTCACACTTCCTGTTTGCGCTTTCCCTACTTGGCGGAGAGGCCTCTTTTCCGATCAATTTCGTACCGGGGAACTCGCCGCCGGCGACTTTTTGCGAGCTTCGGCTCTGCTTCAGCCACCGCCACTAAGGAAAGGAAGGAGAAGGTGATTGTTATATCTGGTCCGACTGGTGCTGGGAAGAGCAGGCTTGCTATGGAGCTTGCTAAGCGTCTCAATGGTGAAATTGTCAGCGCCGACTCTGTCCAGGTATATCAGGGTCTTGATATTGGATCTGCGAAGCCTTCTGCAAGGGATAGAAAGGAGGTTCCGCATCATCTGCTTGACATACTACGTCCATATGAAGAATATTCTGCTGGTCAGTTTTTTGAGGATGCGAGGCAAGCGACAAGATGTATCCTTGATAATGGCCGTGTTCCAATAGTTTCTGGTGGGACAGGATTGTATTTAAGATGGTTCATGTATGGCAAACCCAATGTTCCGAAGGCCACCCCAGACGTTGCTGTCAAAGTATATTCTGAGTTAGCTGACCTTCAGAAAAATGAAGACTGGGATGCAGCTGTGCAATTGGTTGTCAAAGCTGGTGATCCTAGAGCACAGCATTTACCTACTAATGATTGGTACCGATTGCGGCGTAGCTATGAGATTGTCAAGGCAAGTGGTTTACCTCCATCTGCATTTCAAGTTCCATATGACACTTTCAGACAAGGATGTGGTTCTGGTGCAACAAGCAGCTTTCAGGATGCTGACCATTCAGTTGACTCTTCTGTTGATTCAAGTGAGGAAATTAGCTCGAAAGAGTTGGATTATGAGTTCATTTGTTTCTTCCTCTCTAGCCCAAGGCTCAATTTGTATAGGTCAATTGACTTCCGCTGTGAAGATATGATTTCAGGAAGTGATGGGATTTTATCTGAGGCAACATGGCTTCTTAATAGCGGCCTTCTTCCAGATTCAAATTCTGCCACTCGAGCTATTGGTTATAGACAAGCTATGGAGTACCTATTAAGGTGTAGGCAACAAGGTGGAAGGAGTTCTCCAGGAGAGTTCTTTGCCTTTCTCTCTGAATTTCAGAAAGCATCTAGAAATTTTGCAAAAAGGCAATTGACTTGGTTTAGGAATGAGCGGATATATCACTGGCTTGATGCTTCTAAACCCCTGGAAAATGCACTCAACTTTATTTATGATGCTTACCATAATGAAAGTGGAAATATCTCCGTTCCAGATTCACTTAGAATGGAGAAAGATATTTCCAGTCACCGAGAGGCTTCGGAACTCAAGGCTTATCGAGCGAAAAATAGATATTTTGTTAGACGTGAAGATTGTGCTGATGTTTTGGATTGGATAAAAAGAACCCAAAGTGTTTACCAAGATAATCCTGTCGCTTGAACGAGTTCGATCTCGACCTCATTTTTTTATGCAAAGGAATCTTACTTACCAAAAAATCTTGCAGATCTCACTTAAGTTGTGCATAAGTTCAGAAGTGAGTGTTCATTTATTCTACTACCAAATGCCAGAAGTTTGATAATGCTGCTTGTCAATATCGAATCCCCCCCCC

Coding sequence (CDS)

ATGGAAACAATAATCAAATGGAAGCAGCAAACTCTTAATTTTGATTTGAATTCCTTTCTATTCCTCCCTTTGACCTCACTGCAAGTAGATGATGGAATTTGGACTTTTCATCTTGCCAACAAGAGACTCACTCCGGTAGCTGTTCTTTCGAGAATGTTGAACAATGGAGTGCGCAGCCTTCACACTTCCTGTTTGCGCTTTCCCTACTTGGCGGAGAGGCCTCTTTTCCGATCAATTTCGTACCGGGGAACTCGCCGCCGGCGACTTTTTGCGAGCTTCGGCTCTGCTTCAGCCACCGCCACTAAGGAAAGGAAGGAGAAGGTGATTGTTATATCTGGTCCGACTGGTGCTGGGAAGAGCAGGCTTGCTATGGAGCTTGCTAAGCGTCTCAATGGTGAAATTGTCAGCGCCGACTCTGTCCAGGTATATCAGGGTCTTGATATTGGATCTGCGAAGCCTTCTGCAAGGGATAGAAAGGAGGTTCCGCATCATCTGCTTGACATACTACGTCCATATGAAGAATATTCTGCTGGTCAGTTTTTTGAGGATGCGAGGCAAGCGACAAGATGTATCCTTGATAATGGCCGTGTTCCAATAGTTTCTGGTGGGACAGGATTGTATTTAAGATGGTTCATGTATGGCAAACCCAATGTTCCGAAGGCCACCCCAGACGTTGCTGTCAAAGTATATTCTGAGTTAGCTGACCTTCAGAAAAATGAAGACTGGGATGCAGCTGTGCAATTGGTTGTCAAAGCTGGTGATCCTAGAGCACAGCATTTACCTACTAATGATTGGTACCGATTGCGGCGTAGCTATGAGATTGTCAAGGCAAGTGGTTTACCTCCATCTGCATTTCAAGTTCCATATGACACTTTCAGACAAGGATGTGGTTCTGGTGCAACAAGCAGCTTTCAGGATGCTGACCATTCAGTTGACTCTTCTGTTGATTCAAGTGAGGAAATTAGCTCGAAAGAGTTGGATTATGAGTTCATTTGTTTCTTCCTCTCTAGCCCAAGGCTCAATTTGTATAGGTCAATTGACTTCCGCTGTGAAGATATGATTTCAGGAAGTGATGGGATTTTATCTGAGGCAACATGGCTTCTTAATAGCGGCCTTCTTCCAGATTCAAATTCTGCCACTCGAGCTATTGGTTATAGACAAGCTATGGAGTACCTATTAAGGTGTAGGCAACAAGGTGGAAGGAGTTCTCCAGGAGAGTTCTTTGCCTTTCTCTCTGAATTTCAGAAAGCATCTAGAAATTTTGCAAAAAGGCAATTGACTTGGTTTAGGAATGAGCGGATATATCACTGGCTTGATGCTTCTAAACCCCTGGAAAATGCACTCAACTTTATTTATGATGCTTACCATAATGAAAGTGGAAATATCTCCGTTCCAGATTCACTTAGAATGGAGAAAGATATTTCCAGTCACCGAGAGGCTTCGGAACTCAAGGCTTATCGAGCGAAAAATAGATATTTTGTTAGACGTGAAGATTGTGCTGATGTTTTGGATTGGATAAAAAGAACCCAAAGTGTTTACCAAGATAATCCTGTCGCTTGA

Protein sequence

METIIKWKQQTLNFDLNSFLFLPLTSLQVDDGIWTFHLANKRLTPVAVLSRMLNNGVRSLHTSCLRFPYLAERPLFRSISYRGTRRRRLFASFGSASATATKERKEKVIVISGPTGAGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSARDRKEVPHHLLDILRPYEEYSAGQFFEDARQATRCILDNGRVPIVSGGTGLYLRWFMYGKPNVPKATPDVAVKVYSELADLQKNEDWDAAVQLVVKAGDPRAQHLPTNDWYRLRRSYEIVKASGLPPSAFQVPYDTFRQGCGSGATSSFQDADHSVDSSVDSSEEISSKELDYEFICFFLSSPRLNLYRSIDFRCEDMISGSDGILSEATWLLNSGLLPDSNSATRAIGYRQAMEYLLRCRQQGGRSSPGEFFAFLSEFQKASRNFAKRQLTWFRNERIYHWLDASKPLENALNFIYDAYHNESGNISVPDSLRMEKDISSHREASELKAYRAKNRYFVRREDCADVLDWIKRTQSVYQDNPVA

Homology

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BLAST of CmaCh16G004190 vs. ExPASy Swiss-Prot
Match: Q9C5J6 (tRNA dimethylallyltransferase 9 OS=Arabidopsis thaliana OX=3702 GN=IPT9 PE=2 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 7.0e-159
Identity = 275/427 (64.40%), Postives = 337/427 (78.92%), Query Frame = 0


Query: 86  RRRLFASFGSASATAT-----KERKEKVIVISGPTGAGKSRLAMELAKRLNGEIVSADSV 145
           RRR  A+  + S         K  KEKVIVISGPTGAGKSRLAMELAKRLNGEI+SADSV
Sbjct: 25  RRRFCAATTACSVPLNGNKKKKSEKEKVIVISGPTGAGKSRLAMELAKRLNGEIISADSV 84

Query: 146 QVYQGLDIGSAKPSARDRKEVPHHLLDILRPYEEYSAGQFFEDARQATRCILDNGRVPIV 205
           QVY+GLD+GSAKPS  DRK VPHHL+DIL P ++YS GQF++D RQAT+ IL+ GRVPIV
Sbjct: 85  QVYKGLDVGSAKPSDSDRKVVPHHLIDILHPSQDYSVGQFYDDGRQATKDILNRGRVPIV 144

Query: 206 SGGTGLYLRWFMYGKPNVPKATPDVAVKVYSELADLQKNEDWDAAVQLVVKAGDPRAQHL 265
           +GGTGLYLRWFMYGKP+VPK +P+V  + +  L   Q   +WDAAV+LVV AGDP+A  L
Sbjct: 145 TGGTGLYLRWFMYGKPDVPKPSPEVIAEAHDMLVGFQTEYNWDAAVELVVNAGDPKASSL 204

Query: 266 PTNDWYRLRRSYEIVKASGLPPSAFQVPYDTFRQGCGSGATSSFQDADHSVDSSVDSSEE 325
           P NDWYRLRRS EI+K++G PPS+F++PYD+FR    +     F +   S D S+ + E 
Sbjct: 205 PRNDWYRLRRSLEILKSTGSPPSSFRIPYDSFRVNLVAPDADDFLEDGSSADISIQNIE- 264

Query: 326 ISSKELDYEFICFFLSSPRLNLYRSIDFRCEDMISGSDGILSEATWLLNSGLLPDSNSAT 385
               +LDY+F+CFFLSSPR+ LYRSIDFRCEDM+SG +G+LSEA WLL+ GLLP+SN AT
Sbjct: 265 ---TDLDYDFLCFFLSSPRVALYRSIDFRCEDMLSGPNGVLSEARWLLDLGLLPNSNPAT 324

Query: 386 RAIGYRQAMEYLLRCRQQGGRSSPGEFFAFLSEFQKASRNFAKRQLTWFRNERIYHWLDA 445
           RAIGYRQAMEYLL+CR+  G SSP EF+AFL++FQ ASRNFAKRQ+TWFR E +YHWL+A
Sbjct: 325 RAIGYRQAMEYLLQCRRYEGESSPREFYAFLNKFQTASRNFAKRQMTWFRCEPMYHWLNA 384

Query: 446 SKPLENALNFIYDAYHNESGNISVPDSLRMEKDISSHREASELKAYRAKNRYFVRREDCA 505
           SKPL++ L  IYDAY +E+  + +P+SLRM KD+   REASELK YR+KNR+FVRREDC+
Sbjct: 385 SKPLDSILQCIYDAYESEAEMVEIPESLRMSKDVRDSREASELKGYRSKNRHFVRREDCS 444

Query: 506 DVLDWIK 508
            VL+WI+
Sbjct: 445 SVLEWIR 447

[Close]

BLAST of CmaCh16G004190 vs. ExPASy Swiss-Prot
Match: Q6MBT2 (tRNA dimethylallyltransferase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=miaA PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.9e-51
Identity = 121/339 (35.69%), Postives = 189/339 (55.75%), Query Frame = 0


Query: 102 KERKEKVIVISGPTGAGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSARDRKEV 161
           ++ K+++IVI+GPT  GKS LA+ LA+ ++GEI+SADS+QVY+G+DIG+AK +  +R  V
Sbjct: 32  QKNKKRIIVIAGPTCCGKSALALNLAQTMDGEIISADSMQVYRGMDIGTAKATKEERLFV 91

Query: 162 PHHLLDILRPYEEYSAGQFFEDARQATRCILDNGRVPIVSGGTGLYLRWFMYGKPNVPKA 221
           PHHL+DI    E ++   F+ +ARQA + ILD G VPI++GG+G YL   +YG P+ P +
Sbjct: 92  PHHLIDIRDIQESFNVVDFYYEARQACQKILDQGNVPIIAGGSGFYLHALLYGPPSGPPS 151

Query: 222 TPDVAVKVYSELADLQKNEDWDAAVQLVVKAGDPR-AQHLPTNDWYRLRRSYEIVKASGL 281
            P+V      E+  L     ++   QL     DP+ A+ +  ND  ++ R+ EI+  +  
Sbjct: 152 VPEVRKSFEDEIERLGSEILYERLSQL-----DPQYAKTITKNDKQKIVRALEIMMLTNK 211

Query: 282 PPSAFQVPYDTFRQGCGSGATSSFQDADHSVDSSVDSSEEISSKELDYEFICFFLSSPRL 341
             S                                  S +   K  +Y+F C+FL  P+ 
Sbjct: 212 KVSKL--------------------------------SWKGRRKPQNYDFRCWFLHRPKE 271

Query: 342 NLYRSIDFRCEDMISGSDGILSEATWLLNSGLLPDSNSATRAIGYRQAMEYLLRCRQQGG 401
            LY  ID RC+ M+   +G + E   L + G+  +S SA++AIGYRQA+ +L        
Sbjct: 272 KLYERIDKRCDKML--EEGFMDEVRHLDSLGIRGNS-SASQAIGYRQALNFLKT------ 324

Query: 402 RSSPGEFFAFLSEFQKASRNFAKRQLTWFRNERIYHWLD 440
             +  ++  F+  F++A+R++AKRQ TWFR E ++ WLD
Sbjct: 332 EQTASQYQEFIRSFKQATRHYAKRQFTWFRKEPLFRWLD 324

[Close]

BLAST of CmaCh16G004190 vs. ExPASy Swiss-Prot
Match: B3E5Z1 (tRNA dimethylallyltransferase 1 OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) OX=398767 GN=miaA1 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.4e-44
Identity = 116/334 (34.73%), Postives = 176/334 (52.69%), Query Frame = 0


Query: 105 KEKVIVISGPTGAGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSARDRKEVPHH 164
           K +V+VI+GPT +GKS LA++LA  L+GEI+ ADS+ VY+GLDIGSAKP+A  ++++PHH
Sbjct: 2   KPRVLVIAGPTASGKSALALDLAVALDGEIICADSLTVYRGLDIGSAKPTAEQQRQIPHH 61

Query: 165 LLDILRPYEEYSAGQFFEDARQATRCILDNGRVPIVSGGTGLYLRWFMYGKPNVPKATPD 224
           LLDI  P E ++A  F   A+ A   I   G+ PI++GGTGLYLR  + G  + P   P 
Sbjct: 62  LLDIREPTEPFTAADFKLAAKAAIAAICQRGKRPILAGGTGLYLRALLRGLNDAPGEDPV 121

Query: 225 VAVKVYSELADLQKNEDWDAAVQLVVKAGDPRAQHLPTNDWYRLRRSYEIVKASGLPPSA 284
           +   +   L    + E  +  +  + K     +Q L  N+  R+ R+ E+ + +G+P S 
Sbjct: 122 LRETLRKRL----ECEGAETLLAELAKVDPDTSQRLHPNNRNRIIRALEVFQTTGIPLSQ 181

Query: 285 FQVPYDTFRQGCGSGATSSFQDADHSVDSSVDSSEEISSKELDYEFICFFLSSPRLNLYR 344
           FQ                    A+H    S             Y+ + F L  PR  LY+
Sbjct: 182 FQ--------------------AEHGFADS------------PYDSLQFCLDLPRPELYQ 241

Query: 345 SIDFRCEDMISGSDGILSEATWLLNSGLLPDSNSATRAIGYRQAMEYLLRCRQQGGRSSP 404
            ID R + M++   G+++E   LL SG +P      +AIGY++ + +L       G    
Sbjct: 242 RIDDRVDAMLAA--GLVAEVQGLLQSG-VPADCKPLQAIGYKEVLAHL------QGEYDH 287

Query: 405 GEFFAFLSEFQKASRNFAKRQLTWFRNERIYHWL 439
            E    +   ++ +R+FAKRQLTWFR+E    W+
Sbjct: 302 NEMVRLI---KRNTRHFAKRQLTWFRSEPAMQWV 287

[Close]

BLAST of CmaCh16G004190 vs. ExPASy Swiss-Prot
Match: B5EGD5 (tRNA dimethylallyltransferase 1 OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) OX=404380 GN=miaA1 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.8e-44
Identity = 123/339 (36.28%), Postives = 174/339 (51.33%), Query Frame = 0


Query: 102 KERKEKVIVISGPTGAGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSARDRKEV 161
           KE+K KVIV+ GPTG+GKS LA++LA+ + GEIV+ADS+QVY+ LDIG+AKPSA D   V
Sbjct: 4   KEKKIKVIVLGGPTGSGKSDLAVKLAEEIGGEIVNADSMQVYRRLDIGTAKPSAADLARV 63

Query: 162 PHHLLDILRPYEEYSAGQFFEDARQATRCILDNGRVPIVSGGTGLYLRWFMYGKPNVPKA 221
           PHHL+DIL P E+++A  F  +A  A   I   G+  IV GGTGLY+R  +YG  + P  
Sbjct: 64  PHHLIDILDPNEDFTASDFRREATAAIADIERRGKRAIVVGGTGLYIRALLYGLVDSPTG 123

Query: 222 TPDVAVKVYSELADLQKNEDWDAAVQLVVKAGDPR-AQHLPTNDWYRLRRSYEIVKASGL 281
            P++  +      D    E+    + LV    DP  A  L  ND  RL R+ E+   +G 
Sbjct: 124 DPELRRQF-----DDVPGEELLRRLSLV----DPETAARLHPNDRVRLIRALEVYTQTGR 183

Query: 282 PPSAFQVPYDTFRQGCGSGATSSFQDADHSVDSSVDSSEEISSKELDYEFICFFLSSPRL 341
           P SAF+                                 E +  ++ Y+ +   +   R 
Sbjct: 184 PVSAFR--------------------------------SEHAFSDVHYQVLKMAIRVERQ 243

Query: 342 NLYRSIDFRCEDMISGSDGILSEATWLLNSGLLPDSNSATRAIGYRQAMEYLLRCRQQGG 401
            LYR ID R E M+   DG++ E   LL +G       A R+IGY++   YL       G
Sbjct: 244 ELYRRIDLRVEKML--EDGLVEEVRLLLAAG-YGHELKALRSIGYKEITAYL------AG 289

Query: 402 RSSPGEFFAFLSEFQKASRNFAKRQLTWFRNERIYHWLD 440
             +  E    +   ++ +R +AKRQ+TWF  E   +WL+
Sbjct: 304 EMTLDEAVTLI---KRDTRRYAKRQMTWFGKENDIYWLE 289

[Close]

BLAST of CmaCh16G004190 vs. ExPASy Swiss-Prot
Match: A5GEV6 (tRNA dimethylallyltransferase 2 OS=Geobacter uraniireducens (strain Rf4) OX=351605 GN=miaA2 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 7.8e-41
Identity = 119/354 (33.62%), Postives = 179/354 (50.56%), Query Frame = 0


Query: 103 ERKEKVIVISGPTGAGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSARDRKEVP 162
           E K K+I+I GPT +GK+ LA+ LA+R +GEIV+ADS+QVY+G+DIG+AKPS + R+ VP
Sbjct: 5   EDKIKLIIIVGPTASGKTELAVRLAERFDGEIVNADSMQVYRGMDIGTAKPSPQLRQRVP 64

Query: 163 HHLLDILRPYEEYSAGQFFEDARQATRCILDNGRVPIVSGGTGLYLRWFMYGKPNVPKAT 222
           HHL+DI+ P   +SA  F  +A  A   I   G+   V GGTGLY+R  + G  + P   
Sbjct: 65  HHLVDIVTPDVNFSAADFRREAAAAIDDIHSRGKSVFVVGGTGLYIRALLQGLVDSPSGD 124

Query: 223 PDVAVKVYSELADLQKNEDWDAAVQLVVKAGDPR-AQHLPTNDWYRLRRSYEIVKASGLP 282
             +  ++  ELA    NE+    + LV    DP  A+ L  ND  R+ R+ E+ + +G P
Sbjct: 125 ESIRRELV-ELAQTVGNEELLRRLALV----DPETAERLHPNDRLRIIRALEVYRQTGRP 184

Query: 283 PSAFQVPYDTFRQGCGSGATSSFQDADHSVDSSVDSSEEISSKELDYEFICFFLSSPRLN 342
            S       TFR   G   T                          Y+ +   L   R  
Sbjct: 185 IS-------TFRSEHGFADTY-------------------------YDCLKIGLRVERQE 244

Query: 343 LYRSIDFRCEDMISGSDGILSEATWLLNSGLLPDSNSATRAIGYRQAMEYLLRCRQQGGR 402
           LYR ++ R E MI    G+++E   LL +G  PD  S  R+IGY++   YL       G 
Sbjct: 245 LYRRVESRVEVMI--EQGLIAEVEGLLRAGYTPDLKS-MRSIGYKEICAYL------AGE 304

Query: 403 SSPGEFFAFLSEFQKASRNFAKRQLTWFRNERIYHWLDASKPLENALNFIYDAY 456
            +  E    +   ++ +R++AKRQ+TWF  +   +W++  +      N + + +
Sbjct: 305 CTLDEAVQLI---KRDTRHYAKRQMTWFNKDFEINWVEYPESFATICNHVIEFF 309

[Close]

BLAST of CmaCh16G004190 vs. TAIR 10
Match: AT5G20040.1 (isopentenyltransferase 9 )

HSP 1 Score: 562.0 bits (1447), Expect = 5.0e-160
Identity = 275/427 (64.40%), Postives = 337/427 (78.92%), Query Frame = 0


Query: 86  RRRLFASFGSASATAT-----KERKEKVIVISGPTGAGKSRLAMELAKRLNGEIVSADSV 145
           RRR  A+  + S         K  KEKVIVISGPTGAGKSRLAMELAKRLNGEI+SADSV
Sbjct: 25  RRRFCAATTACSVPLNGNKKKKSEKEKVIVISGPTGAGKSRLAMELAKRLNGEIISADSV 84

Query: 146 QVYQGLDIGSAKPSARDRKEVPHHLLDILRPYEEYSAGQFFEDARQATRCILDNGRVPIV 205
           QVY+GLD+GSAKPS  DRK VPHHL+DIL P ++YS GQF++D RQAT+ IL+ GRVPIV
Sbjct: 85  QVYKGLDVGSAKPSDSDRKVVPHHLIDILHPSQDYSVGQFYDDGRQATKDILNRGRVPIV 144

Query: 206 SGGTGLYLRWFMYGKPNVPKATPDVAVKVYSELADLQKNEDWDAAVQLVVKAGDPRAQHL 265
           +GGTGLYLRWFMYGKP+VPK +P+V  + +  L   Q   +WDAAV+LVV AGDP+A  L
Sbjct: 145 TGGTGLYLRWFMYGKPDVPKPSPEVIAEAHDMLVGFQTEYNWDAAVELVVNAGDPKASSL 204

Query: 266 PTNDWYRLRRSYEIVKASGLPPSAFQVPYDTFRQGCGSGATSSFQDADHSVDSSVDSSEE 325
           P NDWYRLRRS EI+K++G PPS+F++PYD+FR    +     F +   S D S+ + E 
Sbjct: 205 PRNDWYRLRRSLEILKSTGSPPSSFRIPYDSFRVNLVAPDADDFLEDGSSADISIQNIE- 264

Query: 326 ISSKELDYEFICFFLSSPRLNLYRSIDFRCEDMISGSDGILSEATWLLNSGLLPDSNSAT 385
               +LDY+F+CFFLSSPR+ LYRSIDFRCEDM+SG +G+LSEA WLL+ GLLP+SN AT
Sbjct: 265 ---TDLDYDFLCFFLSSPRVALYRSIDFRCEDMLSGPNGVLSEARWLLDLGLLPNSNPAT 324

Query: 386 RAIGYRQAMEYLLRCRQQGGRSSPGEFFAFLSEFQKASRNFAKRQLTWFRNERIYHWLDA 445
           RAIGYRQAMEYLL+CR+  G SSP EF+AFL++FQ ASRNFAKRQ+TWFR E +YHWL+A
Sbjct: 325 RAIGYRQAMEYLLQCRRYEGESSPREFYAFLNKFQTASRNFAKRQMTWFRCEPMYHWLNA 384

Query: 446 SKPLENALNFIYDAYHNESGNISVPDSLRMEKDISSHREASELKAYRAKNRYFVRREDCA 505
           SKPL++ L  IYDAY +E+  + +P+SLRM KD+   REASELK YR+KNR+FVRREDC+
Sbjct: 385 SKPLDSILQCIYDAYESEAEMVEIPESLRMSKDVRDSREASELKGYRSKNRHFVRREDCS 444

Query: 506 DVLDWIK 508
            VL+WI+
Sbjct: 445 SVLEWIR 447

[Close]

BLAST of CmaCh16G004190 vs. TAIR 10
Match: AT5G20040.3 (isopentenyltransferase 9 )

HSP 1 Score: 555.4 bits (1430), Expect = 4.7e-158
Identity = 275/433 (63.51%), Postives = 337/433 (77.83%), Query Frame = 0


Query: 86  RRRLFASFGSASATAT-----KERKEKVIVISGPTGAGKSRLAMELAKRLNGEIVSADSV 145
           RRR  A+  + S         K  KEKVIVISGPTGAGKSRLAMELAKRLNGEI+SADSV
Sbjct: 25  RRRFCAATTACSVPLNGNKKKKSEKEKVIVISGPTGAGKSRLAMELAKRLNGEIISADSV 84

Query: 146 QVYQGLDIGSAKPSARDRKEVPHHLLDILRPYEEYSAGQFFEDARQATRCILDNGRVPIV 205
           QVY+GLD+GSAKPS  DRK VPHHL+DIL P ++YS GQF++D RQAT+ IL+ GRVPIV
Sbjct: 85  QVYKGLDVGSAKPSDSDRKVVPHHLIDILHPSQDYSVGQFYDDGRQATKDILNRGRVPIV 144

Query: 206 SGGTGLYLRWFMYGKPNVPKATPDVAVKVYSELADLQKNEDWDAAVQLVVKAGDPRAQHL 265
           +GGTGLYLRWFMYGKP+VPK +P+V  + +  L   Q   +WDAAV+LVV AGDP+A  L
Sbjct: 145 TGGTGLYLRWFMYGKPDVPKPSPEVIAEAHDMLVGFQTEYNWDAAVELVVNAGDPKASSL 204

Query: 266 PTNDWYRLRRSYEIVKASGLPPSAFQVPYDTFRQGCGSGATSSFQDADHSVDSSVDSSEE 325
           P NDWYRLRRS EI+K++G PPS+F++PYD+FR    +     F +   S D S+ + E 
Sbjct: 205 PRNDWYRLRRSLEILKSTGSPPSSFRIPYDSFRVNLVAPDADDFLEDGSSADISIQNIE- 264

Query: 326 ISSKELDYEFICFFLSSPRLNLYRSIDFRCEDMISGSDGILSEATWLLNSGLLPDSNSAT 385
               +LDY+F+CFFLSSPR+ LYRSIDFRCEDM+SG +G+LSEA WLL+ GLLP+SN AT
Sbjct: 265 ---TDLDYDFLCFFLSSPRVALYRSIDFRCEDMLSGPNGVLSEARWLLDLGLLPNSNPAT 324

Query: 386 RAIGYRQ------AMEYLLRCRQQGGRSSPGEFFAFLSEFQKASRNFAKRQLTWFRNERI 445
           RAIGYRQ      AMEYLL+CR+  G SSP EF+AFL++FQ ASRNFAKRQ+TWFR E +
Sbjct: 325 RAIGYRQVNSLFPAMEYLLQCRRYEGESSPREFYAFLNKFQTASRNFAKRQMTWFRCEPM 384

Query: 446 YHWLDASKPLENALNFIYDAYHNESGNISVPDSLRMEKDISSHREASELKAYRAKNRYFV 505
           YHWL+ASKPL++ L  IYDAY +E+  + +P+SLRM KD+   REASELK YR+KNR+FV
Sbjct: 385 YHWLNASKPLDSILQCIYDAYESEAEMVEIPESLRMSKDVRDSREASELKGYRSKNRHFV 444

Query: 506 RREDCADVLDWIK 508
           RREDC+ VL+WI+
Sbjct: 445 RREDCSSVLEWIR 453

[Close]

BLAST of CmaCh16G004190 vs. TAIR 10
Match: AT5G20040.2 (isopentenyltransferase 9 )

HSP 1 Score: 549.7 bits (1415), Expect = 2.6e-156
Identity = 272/427 (63.70%), Postives = 333/427 (77.99%), Query Frame = 0


Query: 86  RRRLFASFGSASATAT-----KERKEKVIVISGPTGAGKSRLAMELAKRLNGEIVSADSV 145
           RRR  A+  + S         K  KEKVIVISGPTGAGKSRLAMELAKRLNGEI+SADSV
Sbjct: 25  RRRFCAATTACSVPLNGNKKKKSEKEKVIVISGPTGAGKSRLAMELAKRLNGEIISADSV 84

Query: 146 QVYQGLDIGSAKPSARDRKEVPHHLLDILRPYEEYSAGQFFEDARQATRCILDNGRVPIV 205
           QVY+GLD+GSAKPS  DRK VPHHL+DIL P ++YS GQF++D RQAT+ IL+ GRVPIV
Sbjct: 85  QVYKGLDVGSAKPSDSDRKVVPHHLIDILHPSQDYSVGQFYDDGRQATKDILNRGRVPIV 144

Query: 206 SGGTGLYLRWFMYGKPNVPKATPDVAVKVYSELADLQKNEDWDAAVQLVVKAGDPRAQHL 265
           +GGTGLYLRWFMYGKP+VPK +P+V  + +  L   Q   +WDAAV+LVV AGDP+A  L
Sbjct: 145 TGGTGLYLRWFMYGKPDVPKPSPEVIAEAHDMLVGFQTEYNWDAAVELVVNAGDPKASSL 204

Query: 266 PTNDWYRLRRSYEIVKASGLPPSAFQVPYDTFRQGCGSGATSSFQDADHSVDSSVDSSEE 325
           P NDWYRLRRS EI+K++G PPS+F++PYD+FR    +     F +   S D S+ + E 
Sbjct: 205 PRNDWYRLRRSLEILKSTGSPPSSFRIPYDSFRVNLVAPDADDFLEDGSSADISIQNIE- 264

Query: 326 ISSKELDYEFICFFLSSPRLNLYRSIDFRCEDMISGSDGILSEATWLLNSGLLPDSNSAT 385
               +LDY+F+CFFLSSPR+ LYRSIDFRCEDM+SG +G+LSEA WLL+ GLLP+SN AT
Sbjct: 265 ---TDLDYDFLCFFLSSPRVALYRSIDFRCEDMLSGPNGVLSEARWLLDLGLLPNSNPAT 324

Query: 386 RAIGYRQAMEYLLRCRQQGGRSSPGEFFAFLSEFQKASRNFAKRQLTWFRNERIYHWLDA 445
           RAIGYRQAMEYLL+CR+  G SSP EF+AFL++FQ ASRNFAKRQ+TWFR E +YHWL+A
Sbjct: 325 RAIGYRQAMEYLLQCRRYEGESSPREFYAFLNKFQTASRNFAKRQMTWFRCEPMYHWLNA 384

Query: 446 SKPLENALNFIYDAYHNESGNISVPDSLRMEKDISSHREASELKAYRAKNRYFVRREDCA 505
           SKPL++ L  IYDAY +E+  + +P+SLRM KD+   REASELK YR+KN    RREDC+
Sbjct: 385 SKPLDSILQCIYDAYESEAEMVEIPESLRMSKDVRDSREASELKGYRSKN----RREDCS 443

Query: 506 DVLDWIK 508
            VL+WI+
Sbjct: 445 SVLEWIR 443

[Close]

BLAST of CmaCh16G004190 vs. TAIR 10
Match: AT1G68460.1 (isopentenyltransferase 1 )

HSP 1 Score: 100.5 bits (249), Expect = 4.1e-21
Identity = 52/129 (40.31%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 84  TRRRRLFASFGSA---SATATKERKEKVIVISGPTGAGKSRLAMELAKRLNGEIVSADSV 143
           T+RRR      S+     + ++ RK+KV+VI G TGAGKSRL+++LA R   EI+++D +
Sbjct: 40  TKRRRKHQPLVSSIRMEQSRSRNRKDKVVVILGATGAGKSRLSVDLATRFPSEIINSDKI 99

Query: 144 QVYQGLDIGSAKPSARDRKEVPHHLLDILRP-YEEYSAGQFFEDARQATRCILDNGRVPI 203
           QVY+GL+I + + + +DR+ VPHHLL ++ P + E +AG+F   A    + I    +VPI
Sbjct: 100 QVYEGLEITTNQITLQDRRGVPHHLLGVINPEHGELTAGEFRSAASNVVKEITSRQKVPI 159

Query: 204 VSGGTGLYL 209
           ++GG+  ++
Sbjct: 160 IAGGSNSFV 168

[Close]

BLAST of CmaCh16G004190 vs. TAIR 10
Match: AT5G19040.1 (isopentenyltransferase 5 )

HSP 1 Score: 98.2 bits (243), Expect = 2.0e-20
Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = 0


Query: 104 RKEKVIVISGPTGAGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSARDRKEVPH 163
           RK+KV+ + G TG GKSRLA++LA R   EIV++D +QVY+GLDI + K +  +   VPH
Sbjct: 31  RKDKVVFVMGATGTGKSRLAIDLATRFPAEIVNSDKIQVYKGLDIVTNKVTPEESLGVPH 90

Query: 164 HLLDILR-PYEEYSAGQFFEDARQATRCILDNGRVPIVSGGTGLYL 209
           HLL  +   YE+++A  F  +A +A   I+   RVPI++GG+  Y+
Sbjct: 91  HLLGTVHDTYEDFTAEDFQREAIRAVESIVQRDRVPIIAGGSNSYI 136

The following BLAST results are available for this feature:

BLAST of CmaCh16G004190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5J6	7.0e-159	64.40	tRNA dimethylallyltransferase 9 OS=Arabidopsis thaliana OX=3702 GN=IPT9 PE=2 SV=...	[more]
Q6MBT2	2.9e-51	35.69	tRNA dimethylallyltransferase OS=Protochlamydia amoebophila (strain UWE25) OX=26...	[more]
B3E5Z1	4.4e-44	34.73	tRNA dimethylallyltransferase 1 OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM...	[more]
B5EGD5	9.8e-44	36.28	tRNA dimethylallyltransferase 1 OS=Geobacter bemidjiensis (strain Bem / ATCC BAA...	[more]
A5GEV6	7.8e-41	33.62	tRNA dimethylallyltransferase 2 OS=Geobacter uraniireducens (strain Rf4) OX=3516...	[more]

BLAST of CmaCh16G004190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20040.1	5.0e-160	64.40	isopentenyltransferase 9	[more]
AT5G20040.3	4.7e-158	63.51	isopentenyltransferase 9	[more]
AT5G20040.2	2.6e-156	63.70	isopentenyltransferase 9	[more]
AT1G68460.1	4.1e-21	40.31	isopentenyltransferase 1	[more]
AT5G19040.1	2.0e-20	45.28	isopentenyltransferase 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.20.140		coord: 218..287 e-value: 3.8E-6 score: 28.7
None	No IPR available	PFAM	PF01715	IPPT	coord: 141..433 e-value: 8.4E-60 score: 202.5
None	No IPR available	PANTHER	PTHR11088:SF60	TRNA DIMETHYLALLYLTRANSFERASE 9	coord: 98..511
None	No IPR available	CDD	cd02019	NK	coord: 108..160 e-value: 1.33518E-4 score: 38.4714
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 105..490 e-value: 2.0E-72 score: 245.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 108..243
IPR018022	IPP transferase	TIGRFAM	TIGR00174	TIGR00174	coord: 108..286 e-value: 1.2E-45 score: 153.9
IPR018022	IPP transferase	HAMAP	MF_00185	IPP_trans	coord: 108..449 score: 25.325008
IPR039657	Dimethylallyltransferase	PANTHER	PTHR11088	TRNA DIMETHYLALLYLTRANSFERASE	coord: 98..511

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G004190.1	CmaCh16G004190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009691	cytokinin biosynthetic process
biological_process	GO:0006400	tRNA modification
biological_process	GO:0008033	tRNA processing
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0052381	tRNA dimethylallyltransferase activity