CmaCh16G004160 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G004160
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor TCP4
Location	Cma_Chr16: 2078869 .. 2080771 (-)
RNA-Seq Expression	CmaCh16G004160
Synteny	CmaCh16G004160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAGCTTTTTGGGAGAGGCAGACGAGGCGGCAGCGGCAGAAGCAGCAGGTTGCAGAGTGGCGGCAGCAGCAGCAGCAATGGCAGGAGGAGGGAGGAGGGAGAGAGGAAGATAGAAGAAGCCATTAAGATTAGGAAAAAGCAGAACCCATTTAAAGCTGGAAGAAGAAAAGCAAAACAATCCGAGTCTGGATCCTCAAGGAAGTCGCCATCATCATCATCAGCATCAAAACCAGATTCTAAATTCGAGGCATGTAGACGGAAAAGCAGAGGAAGACGACCAAGATTCTCCGCCCCACCACCGCCAACACCACCACCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACCACAGCCTTTCAATGCGCACCAGAATCAGCATCTTTTTCTTCAAAACGCTCACCAAGACCAAAATCTGAACAATTACTACGCAGCTTTAGATTCACAGTCAGAACAACAACAACAACAACAACAACCCCACCACCAGGAAGCCTCCAAGAAACGCTCGTACTTTCACCTTCCTCCACCTCATCCGGTGGCGGCCTCGGCCGCCTCTTCTTCCACTTTCGCAGATCAGAGCATCGAATATGCGAGAAAAATGGAAGAGAGCCACCGCCAAACATCGACGTCGTCAAGGTTGGGGATGAGAACTGGCCGCGGCGGCGGCGGCGGTGGGGAGATTGTGGAGGTTCAAGGTGGACACATTGTTCGTTCCACTGGAAGGAAAGATCGTCACAGCAAAGTCTGTACAGCCAAAGGTCCAAGAGACCGCCGTGTTCGCCTCTCTGCCCATACCGCCATCCAGTTCTACGACGTCCAAGACCGCCTCGGATATGACCGACCCAGTAAAGCTGTAGACTGGCTAATGAAAAAGGCCAAGGCCGCCATTGATGAGCTCGCCGAGCTCCCTGCTTGGCATCCGAGCACAGCAAACGCATCCACACAGCGGCAGGAGCAGCAGAGTCTGAGCGATGTGAATGATAACTTACTTTCTGTCCAACGCGATGTTCAAAATTCAACTGGTAACCGGAGAGCAACGGTGGTGGGAAGCGACAGCAGAGTTTCAGAGTTTCCTCGGCAAAACTTGCAGCATACCCGTATGGGGGAAGGCCCAAATAGCAGCACCTCGAGCTTTCTCCCACCGTCGCTGGATTCGGACTCCATTGCCGATACCATCAAATCGTTCTTCCCTATAGGCACGGCGGCGGAGACGACTTCATCGTCAATTCAATTCCAGAATTATCCACAGGATTTGCTTTCCAGGACGAGTAGCCAGAACCAAGATCTGAGGCTTTCTTTGCAGTCTTTTCAAGACCCAATAGCTATTCACCGGCATCATCACGCTCAGCACCATAGTCAAGGTCATCAGAATGAACACGTCCTATTTTCCGGTACCTCCCCATTAAGCGGGTTTGATGTGACCACTGCTGGTTGGTCTGAGCACAACCTCAATCCGGGGGAGATTAGCCGGTTCCCGAGGATAACTTGGAACGCATCTGGTGCAGAAACTGGTAGCGGCGGCGGCGGCGGCACTAGTCATGGCGGAGCTGGGATTAGGAGTACAGGATATGTCTTCAACTCGCCGCAGTTGCCAACTTCGCTGTTACCTTCGCAACTTATGCAGCCATTAATTGGAGAAAACCAGTTTTTTTCTCAGAGGGGACCCCTTCAGTCCAGTCACACACCTTCAATTCGCGCTTGGATTGACCCATCATTTACAGCCACTGATCATCAACAACATCAAATACCACCATCAATCCACCAATCTTCCTACACAGGTTTAGGATTCGCCACCGGCGGGTTCTCTGGGTTTCACATTCCAACGCGAATTCAGGGTGAGGAGGAGCACGATGGCATTTCAGACAAGCCATCCTCTGCTTCCTCTGATTCTCGCCATTGA

mRNA sequence

ATGGCAGAGCTTTTTGGGAGAGGCAGACGAGGCGGCAGCGGCAGAAGCAGCAGGTTGCAGAGTGGCGGCAGCAGCAGCAGCAATGGCAGGAGGAGGGAGGAGGGAGAGAGGAAGATAGAAGAAGCCATTAAGATTAGGAAAAAGCAGAACCCATTTAAAGCTGGAAGAAGAAAAGCAAAACAATCCGATCGCCATCATCATCATCAGCATCAAAACCAGATTCTAAATTCGAGGCATTCAGAACAACAACAACAACAACAACAACCCCACCACCAGGAAGCCTCCAAGAAACGCTCGTACTTTCACCTTCCTCCACCTCATCCGGTGGCGGCCTCGGCCGCCTCTTCTTCCACTTTCGCAGATCAGAGCATCGAATATGCGAGAAAAATGGAAGAGAGCCACCGCCAAACATCGACGTCGTCAAGGTTGGGGATGAGAACTGGCCGCGGCGGCGGCGGCGGTGGGGAGATTGTGGAGGTTCAAGGTGGACACATTGTTCGTTCCACTGGAAGGAAAGATCGTCACAGCAAAGTCTGTACAGCCAAAGGTCCAAGAGACCGCCGTGTTCGCCTCTCTGCCCATACCGCCATCCAGTTCTACGACGTCCAAGACCGCCTCGGATATGACCGACCCAGTAAAGCTGTAGACTGGCTAATGAAAAAGGCCAAGGCCGCCATTGATGAGCTCGCCGAGCTCCCTGCTTGGCATCCGAGCACAGCAAACGCATCCACACAGCGGCAGGAGCAGCAGAGTCTGAGCGATGTGAATGATAACTTACTTTCTGTCCAACGCGATGTTCAAAATTCAACTGGTAACCGGAGAGCAACGGTGGTGGGAAGCGACAGCAGAGTTTCAGAGTTTCCTCGGCAAAACTTGCAGCATACCCGTATGGGGGAAGGCCCAAATAGCAGCACCTCGAGCTTTCTCCCACCGTCGCTGGATTCGGACTCCATTGCCGATACCATCAAATCGTTCTTCCCTATAGGCACGGCGGCGGAGACGACTTCATCGTCAATTCAATTCCAGAATTATCCACAGGATTTGCTTTCCAGGACGAGTAGCCAGAACCAAGATCTGAGGCTTTCTTTGCAGTCTTTTCAAGACCCAATAGCTATTCACCGGCATCATCACGCTCAGCACCATAGTCAAGGTCATCAGAATGAACACGTCCTATTTTCCGGTACCTCCCCATTAAGCGGGTTTGATGTGACCACTGCTGGTTGGTCTGAGCACAACCTCAATCCGGGGGAGATTAGCCGGTTCCCGAGGATAACTTGGAACGCATCTGGTGCAGAAACTGGTAGCGGCGGCGGCGGCGGCACTAGTCATGGCGGAGCTGGGATTAGGAGTACAGGATATGTCTTCAACTCGCCGCAGTTGCCAACTTCGCTGTTACCTTCGCAACTTATGCAGCCATTAATTGGAGAAAACCAGTTTTTTTCTCAGAGGGGACCCCTTCAGTCCAGTCACACACCTTCAATTCGCGCTTGGATTGACCCATCATTTACAGCCACTGATCATCAACAACATCAAATACCACCATCAATCCACCAATCTTCCTACACAGGTTTAGGATTCGCCACCGGCGGGTTCTCTGGGTTTCACATTCCAACGCGAATTCAGGGTGAGGAGGAGCACGATGGCATTTCAGACAAGCCATCCTCTGCTTCCTCTGATTCTCGCCATTGA

Coding sequence (CDS)

ATGGCAGAGCTTTTTGGGAGAGGCAGACGAGGCGGCAGCGGCAGAAGCAGCAGGTTGCAGAGTGGCGGCAGCAGCAGCAGCAATGGCAGGAGGAGGGAGGAGGGAGAGAGGAAGATAGAAGAAGCCATTAAGATTAGGAAAAAGCAGAACCCATTTAAAGCTGGAAGAAGAAAAGCAAAACAATCCGATCGCCATCATCATCATCAGCATCAAAACCAGATTCTAAATTCGAGGCATTCAGAACAACAACAACAACAACAACAACCCCACCACCAGGAAGCCTCCAAGAAACGCTCGTACTTTCACCTTCCTCCACCTCATCCGGTGGCGGCCTCGGCCGCCTCTTCTTCCACTTTCGCAGATCAGAGCATCGAATATGCGAGAAAAATGGAAGAGAGCCACCGCCAAACATCGACGTCGTCAAGGTTGGGGATGAGAACTGGCCGCGGCGGCGGCGGCGGTGGGGAGATTGTGGAGGTTCAAGGTGGACACATTGTTCGTTCCACTGGAAGGAAAGATCGTCACAGCAAAGTCTGTACAGCCAAAGGTCCAAGAGACCGCCGTGTTCGCCTCTCTGCCCATACCGCCATCCAGTTCTACGACGTCCAAGACCGCCTCGGATATGACCGACCCAGTAAAGCTGTAGACTGGCTAATGAAAAAGGCCAAGGCCGCCATTGATGAGCTCGCCGAGCTCCCTGCTTGGCATCCGAGCACAGCAAACGCATCCACACAGCGGCAGGAGCAGCAGAGTCTGAGCGATGTGAATGATAACTTACTTTCTGTCCAACGCGATGTTCAAAATTCAACTGGTAACCGGAGAGCAACGGTGGTGGGAAGCGACAGCAGAGTTTCAGAGTTTCCTCGGCAAAACTTGCAGCATACCCGTATGGGGGAAGGCCCAAATAGCAGCACCTCGAGCTTTCTCCCACCGTCGCTGGATTCGGACTCCATTGCCGATACCATCAAATCGTTCTTCCCTATAGGCACGGCGGCGGAGACGACTTCATCGTCAATTCAATTCCAGAATTATCCACAGGATTTGCTTTCCAGGACGAGTAGCCAGAACCAAGATCTGAGGCTTTCTTTGCAGTCTTTTCAAGACCCAATAGCTATTCACCGGCATCATCACGCTCAGCACCATAGTCAAGGTCATCAGAATGAACACGTCCTATTTTCCGGTACCTCCCCATTAAGCGGGTTTGATGTGACCACTGCTGGTTGGTCTGAGCACAACCTCAATCCGGGGGAGATTAGCCGGTTCCCGAGGATAACTTGGAACGCATCTGGTGCAGAAACTGGTAGCGGCGGCGGCGGCGGCACTAGTCATGGCGGAGCTGGGATTAGGAGTACAGGATATGTCTTCAACTCGCCGCAGTTGCCAACTTCGCTGTTACCTTCGCAACTTATGCAGCCATTAATTGGAGAAAACCAGTTTTTTTCTCAGAGGGGACCCCTTCAGTCCAGTCACACACCTTCAATTCGCGCTTGGATTGACCCATCATTTACAGCCACTGATCATCAACAACATCAAATACCACCATCAATCCACCAATCTTCCTACACAGGTTTAGGATTCGCCACCGGCGGGTTCTCTGGGTTTCACATTCCAACGCGAATTCAGGGTGAGGAGGAGCACGATGGCATTTCAGACAAGCCATCCTCTGCTTCCTCTGATTCTCGCCATTGA

Protein sequence

MAELFGRGRRGGSGRSSRLQSGGSSSSNGRRREEGERKIEEAIKIRKKQNPFKAGRRKAKQSDRHHHHQHQNQILNSRHSEQQQQQQQPHHQEASKKRSYFHLPPPHPVAASAASSSTFADQSIEYARKMEESHRQTSTSSRLGMRTGRGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLMKKAKAAIDELAELPAWHPSTANASTQRQEQQSLSDVNDNLLSVQRDVQNSTGNRRATVVGSDSRVSEFPRQNLQHTRMGEGPNSSTSSFLPPSLDSDSIADTIKSFFPIGTAAETTSSSIQFQNYPQDLLSRTSSQNQDLRLSLQSFQDPIAIHRHHHAQHHSQGHQNEHVLFSGTSPLSGFDVTTAGWSEHNLNPGEISRFPRITWNASGAETGSGGGGGTSHGGAGIRSTGYVFNSPQLPTSLLPSQLMQPLIGENQFFSQRGPLQSSHTPSIRAWIDPSFTATDHQQHQIPPSIHQSSYTGLGFATGGFSGFHIPTRIQGEEEHDGISDKPSSASSDSRH

Homology

[Close]

BLAST of CmaCh16G004160 vs. ExPASy Swiss-Prot
Match: Q8LPR5 (Transcription factor TCP4 OS=Arabidopsis thaliana OX=3702 GN=TCP4 PE=1 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 5.4e-96
Identity = 229/459 (49.89%), Postives = 282/459 (61.44%), Query Frame = 0


Query: 134 HRQTSTSSRLGMRTGRGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA 193
           H    +S R    +    GG GEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA
Sbjct: 8   HPPPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA 67

Query: 194 HTAIQFYDVQDRLGYDRPSKAVDWLMKKAKAAIDELAELPAWHPSTANASTQRQEQQSLS 253
           HTAIQFYDVQDRLG+DRPSKAVDWL+KKAK +IDELAELP W+P+ A             
Sbjct: 68  HTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELAELPPWNPADA------------- 127

Query: 254 DVNDNLLSVQRDVQNSTGNRRATVVGSDSRVSEFP-----RQNLQHTRMGEG-------- 313
                       ++ +  N +     + +++S  P     +Q  Q  + G G        
Sbjct: 128 ------------IRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQLQFGVGFNGGGAEH 187

Query: 314 PNSSTSSFLPPSLDSDSIADTIKSFFP-IGTAAETTSSSIQFQNY----PQDLLSRTSSQ 373
           P+++ SSFLPPS+DSDSIADTIKSFFP IG++ E  S+     NY    P DLLSRT+SQ
Sbjct: 188 PSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYHHQHPPDLLSRTNSQ 247

Query: 374 NQDLRLSLQSFQD--PIAIHRHHHAQHHSQGHQNEHVLFSGTSPLSGFDVTTAGWSEHNL 433
           NQDLRLSLQSF D  P  +H  HH  HH+    +E  LF G S   GFD  T+ W + + 
Sbjct: 248 NQDLRLSLQSFPDGPPSLLHHQHH--HHTSASASEPTLFYGQSNPLGFD--TSSWEQQSS 307

Query: 434 NPGEISRFPRITWNASGAETGSGGGGGTSHGGAGIRSTGYVFNSPQLPTSLLPSQLMQPL 493
             G I R   + WN       SGGGGG +  G G    G++F  P   T+       QP+
Sbjct: 308 EFGRIQRL--VAWN-------SGGGGGATDTGNG---GGFLFAPPTPSTT-----SFQPV 367

Query: 494 IGEN-QFFSQRGPLQSSHTPSIRAWIDP-----SFTATD-HQQHQIPPSIHQSSYTGLGF 553
           +G++ Q +SQRGPLQSS++P IRAW DP     S +  D +  H +PP +HQS+  G+GF
Sbjct: 368 LGQSQQLYSQRGPLQSSYSPMIRAWFDPHHHHQSISTDDLNHHHHLPPPVHQSAIPGIGF 420

Query: 554 ATGGF-SGFHIPTRIQG--EEEHDGISDKPSSASSDSRH 563
           A+G F SGF IP R QG  EE+HDG++ KPSSASS SRH
Sbjct: 428 ASGEFSSGFRIPARFQGQEEEQHDGLTHKPSSASSISRH 420

[Close]

BLAST of CmaCh16G004160 vs. ExPASy Swiss-Prot
Match: Q9MAH8 (Transcription factor TCP3 OS=Arabidopsis thaliana OX=3702 GN=TCP3 PE=1 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.3e-83
Identity = 212/450 (47.11%), Postives = 259/450 (57.56%), Query Frame = 0


Query: 130 MEESHRQTSTSSRLGMRTGRGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRV 189
           +E  H Q++T +         GGG GEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRV
Sbjct: 17  LEMRHHQSATEN---------GGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRV 76

Query: 190 RLSAHTAIQFYDVQDRLGYDRPSKAVDWLMKKAKAAIDELAELPAWHPSTANASTQRQEQ 249
           RLSA TAIQFYDVQDRLG+DRPSKAVDWL+ KAK+AID+LA+LP W+P    A T RQ  
Sbjct: 77  RLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDLAQLPPWNP----ADTLRQHA 136

Query: 250 QSLSDVNDNLLSVQRDVQNSTGNRRATVVGSDSRVSEFPRQNLQHTRMGEGPNSSTSSFL 309
            + +              N+   +  T++       E      +H R+GE    + SSFL
Sbjct: 137 AAAA--------------NAKPRKTKTLISPPPPQPE----ETEHHRIGE-EEDNESSFL 196

Query: 310 PPSLDSDSIADTIKSFFPIGTAAETTSSSIQFQNYPQDLLSRTSSQNQD-LRLSLQSFQD 369
           P S+DSDSIADTIKSFFP+ +           Q+Y     SR ++QNQD LRLSLQSFQ+
Sbjct: 197 PASMDSDSIADTIKSFFPVASTQ---------QSYHHQPPSRGNTQNQDLLRLSLQSFQN 256

Query: 370 PIAIHRHHHAQHHSQGHQNEHVLFSGTSPLS-GFDVTTAGWSEHNLNP--GEISRFPRIT 429
                           +Q E  LFSG S     FD +TA W + + +P  G+I R   ++
Sbjct: 257 GPPF-----------PNQTEPALFSGQSNNQLAFDSSTASWEQSHQSPEFGKIQRL--VS 316

Query: 430 WNASGAETGSGGGGGTSHGGAGIRSTGYVFNSPQLPTSLLPSQLMQPLIGENQFFSQRGP 489
           WN  GA   +G  G            G+VF SP           + P+  ++Q  SQRGP
Sbjct: 317 WNNVGAAESAGSTG------------GFVFASP---------SSLHPVYSQSQLLSQRGP 376

Query: 490 LQSSHTPSIRAWIDP---------SFTATD---HQQHQIPPSIHQSSYTGLGFATGG-FS 549
           LQS +TP IRAW DP         S T  D   H  + IPP IHQS+  G+ FA+ G FS
Sbjct: 377 LQSINTPMIRAWFDPHHHHHHHQQSMTTDDLHHHHPYHIPPGIHQSAIPGIAFASSGEFS 391

Query: 550 GFHIPTRIQGEEEHDGISDKPSSASSDSRH 563
           GF IP R QGE+E  G  +KPSSASSDSRH
Sbjct: 437 GFRIPARFQGEQEEHGGDNKPSSASSDSRH 391

[Close]

BLAST of CmaCh16G004160 vs. ExPASy Swiss-Prot
Match: A2WM14 (Transcription factor PCF5 OS=Oryza sativa subsp. indica OX=39946 GN=PCF5 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.8e-75
Identity = 206/442 (46.61%), Postives = 243/442 (54.98%), Query Frame = 0


Query: 148 GRGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLG 207
           G GGGGGGEIV VQGGHIVRSTGRKDRHSKVCTA+GPRDRRVRLSAHTAIQFYDVQDRLG
Sbjct: 190 GGGGGGGGEIVAVQGGHIVRSTGRKDRHSKVCTARGPRDRRVRLSAHTAIQFYDVQDRLG 249

Query: 208 YDRPSKAVDWLMKKAKAAIDELAELPAWHPSTANASTQRQEQQSLSDVNDNLLSVQRDVQ 267
           YDRPSKAVDWL+K AK AID+L  LPAW P+   A          S  + +        +
Sbjct: 250 YDRPSKAVDWLIKNAKDAIDKLDVLPAWQPTAGGAGAGNAAAPPSSSTHPD------SAE 309

Query: 268 NSTGNRRATVVGSDSRVSEFPRQNLQHTRMG-EGPNSSTSSFLPPSLDSDSIADTIKSFF 327
           NS    +A  V               HT     G  S  +SFLPPSLDSD+IADTIKSFF
Sbjct: 310 NSDDQAQAITVA--------------HTAFDFAGGGSGGTSFLPPSLDSDAIADTIKSFF 369

Query: 328 PIG------TAAETT---SSSIQFQNYPQDLLSRTSSQNQDLRLSLQSFQDPIAIHRHHH 387
           P+G       ++ TT   SS++ FQ+Y  DLLSRT SQ+Q+LRLSLQS  DP+     HH
Sbjct: 370 PMGGTAGGEASSSTTAAQSSAMGFQSYTPDLLSRTGSQSQELRLSLQSLPDPM----FHH 429

Query: 388 AQHHSQG------HQNEHVLFSGTSPLSGFDVTTAGWSEHNLNPGEISRFPRITWNASGA 447
            QH   G         +  LFSG +  S      A W+       +      + WN    
Sbjct: 430 QQHRHGGGGGGGNGTTQQALFSGAANYSFGG--GAMWATEQ----QAQNQRMLPWNV--- 489

Query: 448 ETGSGGGGGTSHGGAGIRSTGYVFNSPQLPTSLLPSQLMQPLIG--ENQFFSQRGPLQSS 507
               GGGGG +          Y+FN  Q    +   Q     +G  ++QFF QRGPLQSS
Sbjct: 490 -PDPGGGGGAA----------YLFNVSQQAAHM---QAAAAALGGHQSQFFFQRGPLQSS 549

Query: 508 HTPSIRAWIDPSFTATDHQQHQIPPSIHQSSYTGLGFATG--GFSGFHIPTRIQGEEEHD 563
           + PS R W  P     D+Q       +  S    +GFA    GFSGF +P RIQG+EEH+
Sbjct: 550 NQPSERGW--PETVEADNQMSHHQGGLSPSVSAAIGFAAPGIGFSGFRLPARIQGDEEHN 582

[Close]

BLAST of CmaCh16G004160 vs. ExPASy Swiss-Prot
Match: Q8LT07 (Transcription factor PCF5 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF5 PE=2 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.8e-75
Identity = 206/442 (46.61%), Postives = 243/442 (54.98%), Query Frame = 0


Query: 148 GRGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLG 207
           G GGGGGGEIV VQGGHIVRSTGRKDRHSKVCTA+GPRDRRVRLSAHTAIQFYDVQDRLG
Sbjct: 66  GGGGGGGGEIVAVQGGHIVRSTGRKDRHSKVCTARGPRDRRVRLSAHTAIQFYDVQDRLG 125

Query: 208 YDRPSKAVDWLMKKAKAAIDELAELPAWHPSTANASTQRQEQQSLSDVNDNLLSVQRDVQ 267
           YDRPSKAVDWL+K AK AID+L  LPAW P+   A          S  + +        +
Sbjct: 126 YDRPSKAVDWLIKNAKDAIDKLDVLPAWQPTAGGAGAGNAAAPPSSSTHPD------SAE 185

Query: 268 NSTGNRRATVVGSDSRVSEFPRQNLQHTRMG-EGPNSSTSSFLPPSLDSDSIADTIKSFF 327
           NS    +A  V               HT     G  S  +SFLPPSLDSD+IADTIKSFF
Sbjct: 186 NSDDQAQAITVA--------------HTAFDFAGGGSGGTSFLPPSLDSDAIADTIKSFF 245

Query: 328 PIG------TAAETT---SSSIQFQNYPQDLLSRTSSQNQDLRLSLQSFQDPIAIHRHHH 387
           P+G       ++ TT   SS++ FQ+Y  DLLSRT SQ+Q+LRLSLQS  DP+     HH
Sbjct: 246 PMGGTAGGEASSSTTAAQSSAMGFQSYTPDLLSRTGSQSQELRLSLQSLPDPM----FHH 305

Query: 388 AQHHSQG------HQNEHVLFSGTSPLSGFDVTTAGWSEHNLNPGEISRFPRITWNASGA 447
            QH   G         +  LFSG +  S      A W+       +      + WN    
Sbjct: 306 QQHRHGGGGGGGNGTTQQALFSGAANYSFGG--GAMWATEQ----QAQNQRMLPWNV--- 365

Query: 448 ETGSGGGGGTSHGGAGIRSTGYVFNSPQLPTSLLPSQLMQPLIG--ENQFFSQRGPLQSS 507
               GGGGG +          Y+FN  Q    +   Q     +G  ++QFF QRGPLQSS
Sbjct: 366 -PDPGGGGGAA----------YLFNVSQQAAHM---QAAAAALGGHQSQFFFQRGPLQSS 425

Query: 508 HTPSIRAWIDPSFTATDHQQHQIPPSIHQSSYTGLGFATG--GFSGFHIPTRIQGEEEHD 563
           + PS R W  P     D+Q       +  S    +GFA    GFSGF +P RIQG+EEH+
Sbjct: 426 NQPSERGW--PETVEADNQMSHHQGGLSPSVSAAIGFAAPGIGFSGFRLPARIQGDEEHN 458

[Close]

BLAST of CmaCh16G004160 vs. ExPASy Swiss-Prot
Match: Q8LT05 (Transcription factor PCF7 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF7 PE=2 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 1.2e-47
Identity = 161/423 (38.06%), Postives = 201/423 (47.52%), Query Frame = 0


Query: 148 GRGGGGGGEIVEVQ-------GGHIVRS-TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQF 207
           G GGG  GE   V+        G IVRS  GRKDRHSKVCTA+G RDRRVRL+AHTAI+F
Sbjct: 109 GDGGGSSGESTPVEALATAFGAGRIVRSAAGRKDRHSKVCTARGLRDRRVRLAAHTAIRF 168

Query: 208 YDVQDRLGYDRPSKAVDWLMKKAKAAIDELAELPAWHPSTANASTQRQEQQSLSDVNDNL 267
           YDVQDRLGYDRPSKAVDWLM+ AKAAIDEL +     P  A AST++ E        +  
Sbjct: 169 YDVQDRLGYDRPSKAVDWLMRNAKAAIDELPDRAEAPPPPAAASTEQPE------ATEQA 228

Query: 268 LSVQRDVQNSTGNRRATVVGSDSRVSEFPRQNLQHTRMGEGPNSSTSSFLPPSLDSDSIA 327
            S      N+TG                         M    +++  SFLP SL +D ++
Sbjct: 229 TSTSYGFGNTTGG-----------------------TMTSAASAAAGSFLPHSLGADRVS 288

Query: 328 DTIKSFFPIGTAAETTSSS--IQFQNYPQDLLSRTSS--QNQDLRLSLQSFQDPIAIH-- 387
           D++KS FP  + A   +S+   +++  P DLLSRT+S  Q Q+L L+LQS Q  I  H  
Sbjct: 289 DSVKSLFPSSSTASGAASAGHDEYRGSPPDLLSRTTSNQQPQELCLTLQSNQHQIFSHVS 348

Query: 388 RHHHAQHHSQGHQNEHVLFSGTSPLSGFDVTTAGWSEHNLNPGEISRFPRITWNASGAET 447
            +HH    S G                      GW +H+             W+A    T
Sbjct: 349 SNHHGMISSAG--------------------VPGWPDHSQR--------MQAWHAPENST 408

Query: 448 GSGGGGGTSHGGAGIRSTGYVFNSPQLPTSLLPSQLMQPLIGENQFFSQRGPLQSSHT-- 507
           G G GGG           GY+F  P            +  + ++Q FS   PLQSS    
Sbjct: 409 GDGRGGG--------NGDGYMFAMPS-----------RQGLDQSQLFSHGEPLQSSGRGW 451

Query: 508 PSIRAWIDPSFTATDHQQHQIPPSIHQSSYTGLGFAT------GGFSGFHIPT--RIQGE 547
            S RAW+DP   A  H Q    PS   +   G G         GGF GF  P   R++GE
Sbjct: 469 ASARAWLDPLAVAAIHHQ----PSTMAAGQVGFGHLVGGAGGGGGFMGFLAPAAQRLEGE 451

[Close]

BLAST of CmaCh16G004160 vs. TAIR 10
Match: AT3G15030.1 (TCP family transcription factor 4 )

HSP 1 Score: 353.2 bits (905), Expect = 3.8e-97
Identity = 229/459 (49.89%), Postives = 282/459 (61.44%), Query Frame = 0


Query: 134 HRQTSTSSRLGMRTGRGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA 193
           H    +S R    +    GG GEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA
Sbjct: 8   HPPPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA 67

Query: 194 HTAIQFYDVQDRLGYDRPSKAVDWLMKKAKAAIDELAELPAWHPSTANASTQRQEQQSLS 253
           HTAIQFYDVQDRLG+DRPSKAVDWL+KKAK +IDELAELP W+P+ A             
Sbjct: 68  HTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELAELPPWNPADA------------- 127

Query: 254 DVNDNLLSVQRDVQNSTGNRRATVVGSDSRVSEFP-----RQNLQHTRMGEG-------- 313
                       ++ +  N +     + +++S  P     +Q  Q  + G G        
Sbjct: 128 ------------IRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQLQFGVGFNGGGAEH 187

Query: 314 PNSSTSSFLPPSLDSDSIADTIKSFFP-IGTAAETTSSSIQFQNY----PQDLLSRTSSQ 373
           P+++ SSFLPPS+DSDSIADTIKSFFP IG++ E  S+     NY    P DLLSRT+SQ
Sbjct: 188 PSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYHHQHPPDLLSRTNSQ 247

Query: 374 NQDLRLSLQSFQD--PIAIHRHHHAQHHSQGHQNEHVLFSGTSPLSGFDVTTAGWSEHNL 433
           NQDLRLSLQSF D  P  +H  HH  HH+    +E  LF G S   GFD  T+ W + + 
Sbjct: 248 NQDLRLSLQSFPDGPPSLLHHQHH--HHTSASASEPTLFYGQSNPLGFD--TSSWEQQSS 307

Query: 434 NPGEISRFPRITWNASGAETGSGGGGGTSHGGAGIRSTGYVFNSPQLPTSLLPSQLMQPL 493
             G I R   + WN       SGGGGG +  G G    G++F  P   T+       QP+
Sbjct: 308 EFGRIQRL--VAWN-------SGGGGGATDTGNG---GGFLFAPPTPSTT-----SFQPV 367

Query: 494 IGEN-QFFSQRGPLQSSHTPSIRAWIDP-----SFTATD-HQQHQIPPSIHQSSYTGLGF 553
           +G++ Q +SQRGPLQSS++P IRAW DP     S +  D +  H +PP +HQS+  G+GF
Sbjct: 368 LGQSQQLYSQRGPLQSSYSPMIRAWFDPHHHHQSISTDDLNHHHHLPPPVHQSAIPGIGF 420

Query: 554 ATGGF-SGFHIPTRIQG--EEEHDGISDKPSSASSDSRH 563
           A+G F SGF IP R QG  EE+HDG++ KPSSASS SRH
Sbjct: 428 ASGEFSSGFRIPARFQGQEEEQHDGLTHKPSSASSISRH 420

[Close]

BLAST of CmaCh16G004160 vs. TAIR 10
Match: AT3G15030.2 (TCP family transcription factor 4 )

HSP 1 Score: 353.2 bits (905), Expect = 3.8e-97
Identity = 229/459 (49.89%), Postives = 282/459 (61.44%), Query Frame = 0


Query: 134 HRQTSTSSRLGMRTGRGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA 193
           H    +S R    +    GG GEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA
Sbjct: 8   HPPPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA 67

Query: 194 HTAIQFYDVQDRLGYDRPSKAVDWLMKKAKAAIDELAELPAWHPSTANASTQRQEQQSLS 253
           HTAIQFYDVQDRLG+DRPSKAVDWL+KKAK +IDELAELP W+P+ A             
Sbjct: 68  HTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELAELPPWNPADA------------- 127

Query: 254 DVNDNLLSVQRDVQNSTGNRRATVVGSDSRVSEFP-----RQNLQHTRMGEG-------- 313
                       ++ +  N +     + +++S  P     +Q  Q  + G G        
Sbjct: 128 ------------IRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQLQFGVGFNGGGAEH 187

Query: 314 PNSSTSSFLPPSLDSDSIADTIKSFFP-IGTAAETTSSSIQFQNY----PQDLLSRTSSQ 373
           P+++ SSFLPPS+DSDSIADTIKSFFP IG++ E  S+     NY    P DLLSRT+SQ
Sbjct: 188 PSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYHHQHPPDLLSRTNSQ 247

Query: 374 NQDLRLSLQSFQD--PIAIHRHHHAQHHSQGHQNEHVLFSGTSPLSGFDVTTAGWSEHNL 433
           NQDLRLSLQSF D  P  +H  HH  HH+    +E  LF G S   GFD  T+ W + + 
Sbjct: 248 NQDLRLSLQSFPDGPPSLLHHQHH--HHTSASASEPTLFYGQSNPLGFD--TSSWEQQSS 307

Query: 434 NPGEISRFPRITWNASGAETGSGGGGGTSHGGAGIRSTGYVFNSPQLPTSLLPSQLMQPL 493
             G I R   + WN       SGGGGG +  G G    G++F  P   T+       QP+
Sbjct: 308 EFGRIQRL--VAWN-------SGGGGGATDTGNG---GGFLFAPPTPSTT-----SFQPV 367

Query: 494 IGEN-QFFSQRGPLQSSHTPSIRAWIDP-----SFTATD-HQQHQIPPSIHQSSYTGLGF 553
           +G++ Q +SQRGPLQSS++P IRAW DP     S +  D +  H +PP +HQS+  G+GF
Sbjct: 368 LGQSQQLYSQRGPLQSSYSPMIRAWFDPHHHHQSISTDDLNHHHHLPPPVHQSAIPGIGF 420

Query: 554 ATGGF-SGFHIPTRIQG--EEEHDGISDKPSSASSDSRH 563
           A+G F SGF IP R QG  EE+HDG++ KPSSASS SRH
Sbjct: 428 ASGEFSSGFRIPARFQGQEEEQHDGLTHKPSSASSISRH 420

[Close]

BLAST of CmaCh16G004160 vs. TAIR 10
Match: AT3G15030.3 (TCP family transcription factor 4 )

HSP 1 Score: 353.2 bits (905), Expect = 3.8e-97
Identity = 229/459 (49.89%), Postives = 282/459 (61.44%), Query Frame = 0


Query: 134 HRQTSTSSRLGMRTGRGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA 193
           H    +S R    +    GG GEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA
Sbjct: 8   HPPPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA 67

Query: 194 HTAIQFYDVQDRLGYDRPSKAVDWLMKKAKAAIDELAELPAWHPSTANASTQRQEQQSLS 253
           HTAIQFYDVQDRLG+DRPSKAVDWL+KKAK +IDELAELP W+P+ A             
Sbjct: 68  HTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELAELPPWNPADA------------- 127

Query: 254 DVNDNLLSVQRDVQNSTGNRRATVVGSDSRVSEFP-----RQNLQHTRMGEG-------- 313
                       ++ +  N +     + +++S  P     +Q  Q  + G G        
Sbjct: 128 ------------IRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQLQFGVGFNGGGAEH 187

Query: 314 PNSSTSSFLPPSLDSDSIADTIKSFFP-IGTAAETTSSSIQFQNY----PQDLLSRTSSQ 373
           P+++ SSFLPPS+DSDSIADTIKSFFP IG++ E  S+     NY    P DLLSRT+SQ
Sbjct: 188 PSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYHHQHPPDLLSRTNSQ 247

Query: 374 NQDLRLSLQSFQD--PIAIHRHHHAQHHSQGHQNEHVLFSGTSPLSGFDVTTAGWSEHNL 433
           NQDLRLSLQSF D  P  +H  HH  HH+    +E  LF G S   GFD  T+ W + + 
Sbjct: 248 NQDLRLSLQSFPDGPPSLLHHQHH--HHTSASASEPTLFYGQSNPLGFD--TSSWEQQSS 307

Query: 434 NPGEISRFPRITWNASGAETGSGGGGGTSHGGAGIRSTGYVFNSPQLPTSLLPSQLMQPL 493
             G I R   + WN       SGGGGG +  G G    G++F  P   T+       QP+
Sbjct: 308 EFGRIQRL--VAWN-------SGGGGGATDTGNG---GGFLFAPPTPSTT-----SFQPV 367

Query: 494 IGEN-QFFSQRGPLQSSHTPSIRAWIDP-----SFTATD-HQQHQIPPSIHQSSYTGLGF 553
           +G++ Q +SQRGPLQSS++P IRAW DP     S +  D +  H +PP +HQS+  G+GF
Sbjct: 368 LGQSQQLYSQRGPLQSSYSPMIRAWFDPHHHHQSISTDDLNHHHHLPPPVHQSAIPGIGF 420

Query: 554 ATGGF-SGFHIPTRIQG--EEEHDGISDKPSSASSDSRH 563
           A+G F SGF IP R QG  EE+HDG++ KPSSASS SRH
Sbjct: 428 ASGEFSSGFRIPARFQGQEEEQHDGLTHKPSSASSISRH 420

[Close]

BLAST of CmaCh16G004160 vs. TAIR 10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 )

HSP 1 Score: 311.2 bits (796), Expect = 1.7e-84
Identity = 212/450 (47.11%), Postives = 259/450 (57.56%), Query Frame = 0


Query: 130 MEESHRQTSTSSRLGMRTGRGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRV 189
           +E  H Q++T +         GGG GEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRV
Sbjct: 17  LEMRHHQSATEN---------GGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRV 76

Query: 190 RLSAHTAIQFYDVQDRLGYDRPSKAVDWLMKKAKAAIDELAELPAWHPSTANASTQRQEQ 249
           RLSA TAIQFYDVQDRLG+DRPSKAVDWL+ KAK+AID+LA+LP W+P    A T RQ  
Sbjct: 77  RLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDLAQLPPWNP----ADTLRQHA 136

Query: 250 QSLSDVNDNLLSVQRDVQNSTGNRRATVVGSDSRVSEFPRQNLQHTRMGEGPNSSTSSFL 309
            + +              N+   +  T++       E      +H R+GE    + SSFL
Sbjct: 137 AAAA--------------NAKPRKTKTLISPPPPQPE----ETEHHRIGE-EEDNESSFL 196

Query: 310 PPSLDSDSIADTIKSFFPIGTAAETTSSSIQFQNYPQDLLSRTSSQNQD-LRLSLQSFQD 369
           P S+DSDSIADTIKSFFP+ +           Q+Y     SR ++QNQD LRLSLQSFQ+
Sbjct: 197 PASMDSDSIADTIKSFFPVASTQ---------QSYHHQPPSRGNTQNQDLLRLSLQSFQN 256

Query: 370 PIAIHRHHHAQHHSQGHQNEHVLFSGTSPLS-GFDVTTAGWSEHNLNP--GEISRFPRIT 429
                           +Q E  LFSG S     FD +TA W + + +P  G+I R   ++
Sbjct: 257 GPPF-----------PNQTEPALFSGQSNNQLAFDSSTASWEQSHQSPEFGKIQRL--VS 316

Query: 430 WNASGAETGSGGGGGTSHGGAGIRSTGYVFNSPQLPTSLLPSQLMQPLIGENQFFSQRGP 489
           WN  GA   +G  G            G+VF SP           + P+  ++Q  SQRGP
Sbjct: 317 WNNVGAAESAGSTG------------GFVFASP---------SSLHPVYSQSQLLSQRGP 376

Query: 490 LQSSHTPSIRAWIDP---------SFTATD---HQQHQIPPSIHQSSYTGLGFATGG-FS 549
           LQS +TP IRAW DP         S T  D   H  + IPP IHQS+  G+ FA+ G FS
Sbjct: 377 LQSINTPMIRAWFDPHHHHHHHQQSMTTDDLHHHHPYHIPPGIHQSAIPGIAFASSGEFS 391

Query: 550 GFHIPTRIQGEEEHDGISDKPSSASSDSRH 563
           GF IP R QGE+E  G  +KPSSASSDSRH
Sbjct: 437 GFRIPARFQGEQEEHGGDNKPSSASSDSRH 391

[Close]

BLAST of CmaCh16G004160 vs. TAIR 10
Match: AT2G31070.1 (TCP domain protein 10 )

HSP 1 Score: 172.6 bits (436), Expect = 9.3e-43
Identity = 160/432 (37.04%), Postives = 210/432 (48.61%), Query Frame = 0


Query: 143 LGMRTGRGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDV 202
           +G++    G GGGEIVEVQGGHI+R+TGRKDRHSKV T+KGPRDRRVRLSAHTAIQFYDV
Sbjct: 1   MGLKGYSVGEGGGEIVEVQGGHIIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDV 60

Query: 203 QDRLGYDRPSKAVDWLMKKAKAAIDELAELPAWHPSTANASTQRQEQQSLSDVNDNLLSV 262
           QDRLGYDRPSKAVDWL+KKAK AID+L EL          +T RQE  +    +  L+  
Sbjct: 61  QDRLGYDRPSKAVDWLIKKAKTAIDKL-EL-----GETTTTTTRQEPVNTKPESPTLV-- 120

Query: 263 QRDVQNSTGNRRATVVGSDSRVSEFPRQNLQHTRMGEGPNSSTSSFLPPSLDSDSIADTI 322
                                   F R+N   T+           F+  +LD +   D +
Sbjct: 121 ------------------------FQRENNDQTQ-----------FVAANLDPE---DAM 180

Query: 323 KSFFPIGTAAE-TTSSSIQFQNYP----QDLLSRTSSQ----NQDLRLSLQSFQDPIAIH 382
           K+FFP  T       ++I FQNYP     +++SRT++     +QDL LSL  F       
Sbjct: 181 KTFFPATTTTNGGGGTNINFQNYPHQDDNNMVSRTTTPPPNLSQDLGLSLHPF------- 240

Query: 383 RHHHAQHHSQGHQNEHVL-FSGTSPLSGFDV--TTAGWSEHNLNPGEISRFPRITWNASG 442
                    QG+ N  V+  +     + FD     +GW+ H+L             ++S 
Sbjct: 241 ---------QGNNNTVVVPETNNFTTTHFDTFGRISGWNHHDLT----------MTSSSS 300

Query: 443 AETGSGGGGGTSHGGAGIRSTGYVFNSPQLPTSLLPSQLMQPLIGENQFFSQRGPLQSSH 502
           +E         S+GG  +    +  +      +LL SQ  Q  +G  Q   QRG LQSS 
Sbjct: 301 SEHQQQEQEERSNGGFMVNHHPHHHHHQPSMMTLLNSQQQQVFLGGQQQQQQRGTLQSSL 355

Query: 503 TP-SIRAWIDPSFTATDHQQHQIPPS---IHQSSYTGLGFATGGFSGFHIPTRIQGEEEH 559
            P S R+W D   T +DH  HQ   S      S Y   G        F   TR+   EE 
Sbjct: 361 FPHSFRSW-DHHQTTSDHHHHQNQASSMFASSSQYGSHGMMMMQGLSFPNTTRLLHGEE- 355

The following BLAST results are available for this feature:

BLAST of CmaCh16G004160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPR5	5.4e-96	49.89	Transcription factor TCP4 OS=Arabidopsis thaliana OX=3702 GN=TCP4 PE=1 SV=1	[more]
Q9MAH8	2.3e-83	47.11	Transcription factor TCP3 OS=Arabidopsis thaliana OX=3702 GN=TCP3 PE=1 SV=1	[more]
A2WM14	1.8e-75	46.61	Transcription factor PCF5 OS=Oryza sativa subsp. indica OX=39946 GN=PCF5 PE=4 SV...	[more]
Q8LT07	1.8e-75	46.61	Transcription factor PCF5 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF5 PE=2 ...	[more]
Q8LT05	1.2e-47	38.06	Transcription factor PCF7 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF7 PE=2 ...	[more]

BLAST of CmaCh16G004160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15030.1	3.8e-97	49.89	TCP family transcription factor 4	[more]
AT3G15030.2	3.8e-97	49.89	TCP family transcription factor 4	[more]
AT3G15030.3	3.8e-97	49.89	TCP family transcription factor 4	[more]
AT1G53230.1	1.7e-84	47.11	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3	[more]
AT2G31070.1	9.3e-43	37.04	TCP domain protein 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 170..270 e-value: 1.0E-30 score: 107.3
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 171..229 score: 34.248535
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 540..562
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..310
None	No IPR available	PANTHER	PTHR31072:SF166	TRANSCRIPTION FACTOR TCP4	coord: 130..562
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 130..562

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G004160.1	CmaCh16G004160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000032	regulation of secondary shoot formation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding