CmaCh16G003790 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G003790
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCma_Chr16: 1796438 .. 1798477 (+)
RNA-Seq ExpressionCmaCh16G003790
SyntenyCmaCh16G003790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCAATGGCATTCGGTTATCGATCTTCATCCCAAATCCTAATCGCCTTCTCTTTCGGATCCTCCATTCTTACCTCGGTTCTTCTCACATTGACATTGCCCCTCCGCCATCATCCCCACCATTCAAATGCTCAATCTCGCGCCGTTCCCTCTCTGCAACTCTTCGCAACCTCCTGCAGCCGCTCTCTGCGCTGGACTCACCTCCGATTCTATCTTATGCCTCGGTTTTCCAGTTCCTTACTGGCCAAAATCTGTTGAAATTGGGCCAACAAGTTCATGCCCATATGCTTCTCCGTGGCCTTGAGCCCACTGCACTTGTTGGTTCCAAGATGGTTGCATTTTATGCGAGTTCTGGTGATATTGATTCATCTGTTGCGGTTTTCAATCGGAATAGTGAGCCTTCTTCTCTCTTGTTTAATTCTATGATTCGAGCCTATGCGAGATATGGGTTTGCGGAGAGAACTGTTGCCACTTATATTTCTATGCATTCTTGGGGCTTTACAGGGGATTACTTTACTTTTCCTTTCGTTCTTAAGTCTTCTGTGGATTTGTTGAGTGTTTGGATGGGGAAATGTGTTCATGGACTGGTTTTGAGAGCTGGGTTGCAGTTTGATTTGTATGTGGCTACTTCTTTGATTGATTTGTATGGGAAATGTGGTGAAATAAATGATGCGCGTAAGGTGTTTGATAAAATGATTGTTAGAGATGTTTCGGCTTGGAATGCTTTACTTGCTGGTTACATGAAGGGGGGGTTTATAGATGCTGCTGTGGCGATTTTTGAGAGAATGCCGTGGAGGAATATTGTCTCTTGGACGACTATGATTTCTGGATACTCACAGAGCGGCTTGGCACAGCAGGCATTGAGTTTGTTTGATGAAATGCTGAAAGAAGATTCAGGAGTAAGACCCAATTGGGTGACTATAATGAGTGTCCTCCCAGCTTGTGCACAATCATCGGCGCTCGATCGTGGAAGGCGGATTCACGAGTTGGCTTGTCGGATGGGTTTGAATTCCAATGCTTCTGTGCTAATTGCCCTTACTGCAATGTACGCTAAATGTGGAAGCTTAGCTGATGCTCGCAACTGTTTCAACCGGCTTAATAGAAGTGAAAAGAGTTTGGTTGCTTGGAATACCATGATTACTGCTTATGCTTCGTATGGACATGGGCGGGAAGCAGTGTCAACCTTTCAGGAGATGATCGAAGCAGGCATACGGCCCGATGACATTACATTCACAGGATTGTTATCCGCTTGCAGCCATTCAGGTCTTGTTGACATTGGCTTGAATTACTTCAACTACATGAGCACCACATATTCGACAAATCCCAGAGCTGAGCATTATGCTTGTGTTGTCGATCTCTTAGGTCGGGCAGGGAGATTAGCTGAAGCAAGTAAACTTGTAGATGAAATGCCAATGCCAGCAGGACCGAGCATTTGGGGTTCGTTATTAGCTGCCTGCCGAAAATACCGCAATCTAGAAATGGCAGAAACTGCAGCAAGAAAGCTATTTGTCCTCGAACCCGAAAACACTGGCAACTATGTCCTGCTCTCAAACATGTACGCCGAAGCTGGAAGGTGGCAGGAAGTTGACAAACTGAGAGCGATTCTGACATCCCAGGGGACAAAGAAAAGTCCAGGTTGCAGTTGGATCGAGGTCAATGGAAAAGCGCATATGTTTCTCGGTGGCGACACGTCCCACCCTCAAACCAAGGAAATCTACATGTTCTTGGAGGCATTGCCGGAGAAGATGAAGGCAGCTGGCTACACTCCTGATACTAGCTTTGTGTTGCATGATATCAGCGAGGAAGAGAAAGAATTTAACCTCATTGCACACAGCGAGAAGCTCGCGGTTGCATTCGGAATCCTCAACACTCCTTCCGAAACCGTTATCCGAGTTACGAAGAACTTGAGAATCTGTGGGGATTGCCACACTGCAATGGTGTTCATATCAGAGATATATGGGCGGGAAGTCGTTGTTCGAGATGTGAATCGGTTCCATCACTTCAAAGCGGGTTCGTGTTCTTGTGGAGATTACTGGTGA

mRNA sequence

ATGCTCAATGGCATTCGGTTATCGATCTTCATCCCAAATCCTAATCGCCTTCTCTTTCGGATCCTCCATTCTTACCTCGGTTCTTCTCACATTGACATTGCCCCTCCGCCATCATCCCCACCATTCAAATGCTCAATCTCGCGCCGTTCCCTCTCTGCAACTCTTCGCAACCTCCTGCAGCCGCTCTCTGCGCTGGACTCACCTCCGATTCTATCTTATGCCTCGGTTTTCCAGTTCCTTACTGGCCAAAATCTGTTGAAATTGGGCCAACAAGTTCATGCCCATATGCTTCTCCGTGGCCTTGAGCCCACTGCACTTGTTGGTTCCAAGATGGTTGCATTTTATGCGAGTTCTGGTGATATTGATTCATCTGTTGCGGTTTTCAATCGGAATAGTGAGCCTTCTTCTCTCTTGTTTAATTCTATGATTCGAGCCTATGCGAGATATGGGTTTGCGGAGAGAACTGTTGCCACTTATATTTCTATGCATTCTTGGGGCTTTACAGGGGATTACTTTACTTTTCCTTTCGTTCTTAAGTCTTCTGTGGATTTGTTGAGTGTTTGGATGGGGAAATGTGTTCATGGACTGGTTTTGAGAGCTGGGTTGCAGTTTGATTTGTATGTGGCTACTTCTTTGATTGATTTGTATGGGAAATGTGGTGAAATAAATGATGCGCGTAAGGTGTTTGATAAAATGATTGTTAGAGATGTTTCGGCTTGGAATGCTTTACTTGCTGGTTACATGAAGGGGGGGTTTATAGATGCTGCTGTGGCGATTTTTGAGAGAATGCCGTGGAGGAATATTGTCTCTTGGACGACTATGATTTCTGGATACTCACAGAGCGGCTTGGCACAGCAGGCATTGAGTTTGTTTGATGAAATGCTGAAAGAAGATTCAGGAGTAAGACCCAATTGGGTGACTATAATGAGTGTCCTCCCAGCTTGTGCACAATCATCGGCGCTCGATCGTGGAAGGCGGATTCACGAGTTGGCTTGTCGGATGGGTTTGAATTCCAATGCTTCTGTGCTAATTGCCCTTACTGCAATGTACGCTAAATGTGGAAGCTTAGCTGATGCTCGCAACTGTTTCAACCGGCTTAATAGAAGTGAAAAGAGTTTGGTTGCTTGGAATACCATGATTACTGCTTATGCTTCGTATGGACATGGGCGGGAAGCAGTGTCAACCTTTCAGGAGATGATCGAAGCAGGCATACGGCCCGATGACATTACATTCACAGGATTGTTATCCGCTTGCAGCCATTCAGGTCTTGTTGACATTGGCTTGAATTACTTCAACTACATGAGCACCACATATTCGACAAATCCCAGAGCTGAGCATTATGCTTGTGTTGTCGATCTCTTAGGTCGGGCAGGGAGATTAGCTGAAGCAAGTAAACTTGTAGATGAAATGCCAATGCCAGCAGGACCGAGCATTTGGGGTTCGTTATTAGCTGCCTGCCGAAAATACCGCAATCTAGAAATGGCAGAAACTGCAGCAAGAAAGCTATTTGTCCTCGAACCCGAAAACACTGGCAACTATGTCCTGCTCTCAAACATGTACGCCGAAGCTGGAAGGTGGCAGGAAGTTGACAAACTGAGAGCGATTCTGACATCCCAGGGGACAAAGAAAAGTCCAGGTTGCAGTTGGATCGAGGTCAATGGAAAAGCGCATATGTTTCTCGGTGGCGACACGTCCCACCCTCAAACCAAGGAAATCTACATGTTCTTGGAGGCATTGCCGGAGAAGATGAAGGCAGCTGGCTACACTCCTGATACTAGCTTTGTGTTGCATGATATCAGCGAGGAAGAGAAAGAATTTAACCTCATTGCACACAGCGAGAAGCTCGCGGTTGCATTCGGAATCCTCAACACTCCTTCCGAAACCGTTATCCGAGTTACGAAGAACTTGAGAATCTGTGGGGATTGCCACACTGCAATGGTGTTCATATCAGAGATATATGGGCGGGAAGTCGTTGTTCGAGATGTGAATCGGTTCCATCACTTCAAAGCGGGTTCGTGTTCTTGTGGAGATTACTGGTGA

Coding sequence (CDS)

ATGCTCAATGGCATTCGGTTATCGATCTTCATCCCAAATCCTAATCGCCTTCTCTTTCGGATCCTCCATTCTTACCTCGGTTCTTCTCACATTGACATTGCCCCTCCGCCATCATCCCCACCATTCAAATGCTCAATCTCGCGCCGTTCCCTCTCTGCAACTCTTCGCAACCTCCTGCAGCCGCTCTCTGCGCTGGACTCACCTCCGATTCTATCTTATGCCTCGGTTTTCCAGTTCCTTACTGGCCAAAATCTGTTGAAATTGGGCCAACAAGTTCATGCCCATATGCTTCTCCGTGGCCTTGAGCCCACTGCACTTGTTGGTTCCAAGATGGTTGCATTTTATGCGAGTTCTGGTGATATTGATTCATCTGTTGCGGTTTTCAATCGGAATAGTGAGCCTTCTTCTCTCTTGTTTAATTCTATGATTCGAGCCTATGCGAGATATGGGTTTGCGGAGAGAACTGTTGCCACTTATATTTCTATGCATTCTTGGGGCTTTACAGGGGATTACTTTACTTTTCCTTTCGTTCTTAAGTCTTCTGTGGATTTGTTGAGTGTTTGGATGGGGAAATGTGTTCATGGACTGGTTTTGAGAGCTGGGTTGCAGTTTGATTTGTATGTGGCTACTTCTTTGATTGATTTGTATGGGAAATGTGGTGAAATAAATGATGCGCGTAAGGTGTTTGATAAAATGATTGTTAGAGATGTTTCGGCTTGGAATGCTTTACTTGCTGGTTACATGAAGGGGGGGTTTATAGATGCTGCTGTGGCGATTTTTGAGAGAATGCCGTGGAGGAATATTGTCTCTTGGACGACTATGATTTCTGGATACTCACAGAGCGGCTTGGCACAGCAGGCATTGAGTTTGTTTGATGAAATGCTGAAAGAAGATTCAGGAGTAAGACCCAATTGGGTGACTATAATGAGTGTCCTCCCAGCTTGTGCACAATCATCGGCGCTCGATCGTGGAAGGCGGATTCACGAGTTGGCTTGTCGGATGGGTTTGAATTCCAATGCTTCTGTGCTAATTGCCCTTACTGCAATGTACGCTAAATGTGGAAGCTTAGCTGATGCTCGCAACTGTTTCAACCGGCTTAATAGAAGTGAAAAGAGTTTGGTTGCTTGGAATACCATGATTACTGCTTATGCTTCGTATGGACATGGGCGGGAAGCAGTGTCAACCTTTCAGGAGATGATCGAAGCAGGCATACGGCCCGATGACATTACATTCACAGGATTGTTATCCGCTTGCAGCCATTCAGGTCTTGTTGACATTGGCTTGAATTACTTCAACTACATGAGCACCACATATTCGACAAATCCCAGAGCTGAGCATTATGCTTGTGTTGTCGATCTCTTAGGTCGGGCAGGGAGATTAGCTGAAGCAAGTAAACTTGTAGATGAAATGCCAATGCCAGCAGGACCGAGCATTTGGGGTTCGTTATTAGCTGCCTGCCGAAAATACCGCAATCTAGAAATGGCAGAAACTGCAGCAAGAAAGCTATTTGTCCTCGAACCCGAAAACACTGGCAACTATGTCCTGCTCTCAAACATGTACGCCGAAGCTGGAAGGTGGCAGGAAGTTGACAAACTGAGAGCGATTCTGACATCCCAGGGGACAAAGAAAAGTCCAGGTTGCAGTTGGATCGAGGTCAATGGAAAAGCGCATATGTTTCTCGGTGGCGACACGTCCCACCCTCAAACCAAGGAAATCTACATGTTCTTGGAGGCATTGCCGGAGAAGATGAAGGCAGCTGGCTACACTCCTGATACTAGCTTTGTGTTGCATGATATCAGCGAGGAAGAGAAAGAATTTAACCTCATTGCACACAGCGAGAAGCTCGCGGTTGCATTCGGAATCCTCAACACTCCTTCCGAAACCGTTATCCGAGTTACGAAGAACTTGAGAATCTGTGGGGATTGCCACACTGCAATGGTGTTCATATCAGAGATATATGGGCGGGAAGTCGTTGTTCGAGATGTGAATCGGTTCCATCACTTCAAAGCGGGTTCGTGTTCTTGTGGAGATTACTGGTGA

Protein sequence

MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQPLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGDIDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKSSVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAWNALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSGVRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADARNCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSHSGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWGSLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQGTKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDISEEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVRDVNRFHHFKAGSCSCGDYW
Homology
[Close]
BLAST of CmaCh16G003790 vs. ExPASy Swiss-Prot
Match: P0C899 (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 6.6e-141
Identity = 267/648 (41.20%), Postives = 379/648 (58.49%), Query Frame = 0 

Query: 79  FLTGQNL-----LKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGDIDSSVAVFNRNSE 138
           FL GQ L     ++  + VH+ ++L  L   + +G K++  YAS  D+ S+  VF+   E
Sbjct: 43  FLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPE 102

Query: 139 PSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKSSVDLLSVWMGKCV 198
            + ++ N MIR+Y   GF    V  + +M       D++TFP VLK+     ++ +G+ +
Sbjct: 103 RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI 162

Query: 199 HGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAWNALLAGYMKGGFI 258
           HG   + GL   L+V   L+ +YGKCG +++AR V D+M  RDV +WN+L+ GY +    
Sbjct: 163 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF 222

Query: 259 DAAVAI-------------------------------------FERMPWRNIVSWTTMIS 318
           D A+ +                                     F +M  +++VSW  MI 
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIG 282

Query: 319 GYSQSGLAQQALSLFDEMLKEDSGVRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGL 378
            Y ++ +  +A+ L+  M  E  G  P+ V+I SVLPAC  +SAL  G++IH    R  L
Sbjct: 283 VYMKNAMPVEAVELYSRM--EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKL 342

Query: 379 NSNASVLIALTAMYAKCGSLADARNCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTF 438
             N  +  AL  MYAKCG L  AR+ F   N   + +V+W  MI+AY   G G +AV+ F
Sbjct: 343 IPNLLLENALIDMYAKCGCLEKARDVFE--NMKSRDVVSWTAMISAYGFSGRGCDAVALF 402

Query: 439 QEMIEAGIRPDDITFTGLLSACSHSGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGR 498
            ++ ++G+ PD I F   L+ACSH+GL++ G + F  M+  Y   PR EH AC+VDLLGR
Sbjct: 403 SKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGR 462

Query: 499 AGRLAEASKLVDEMPMPAGPSIWGSLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLL 558
           AG++ EA + + +M M     +WG+LL ACR + + ++   AA KLF L PE +G YVLL
Sbjct: 463 AGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLL 522

Query: 559 SNMYAEAGRWQEVDKLRAILTSQGTKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFL 618
           SN+YA+AGRW+EV  +R I+ S+G KK+PG S +EVN   H FL GD SHPQ+ EIY  L
Sbjct: 523 SNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYREL 582

Query: 619 EALPEKMKAAGYTPDTSFVLHDISEEEKEFNLIAHSEKLAVAFGILNTPSE-----TVIR 678
           + L +KMK  GY PD+   LHD+ EE+KE +L  HSEKLA+ F ++NT  E       IR
Sbjct: 583 DVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIR 642

Query: 679 VTKNLRICGDCHTAMVFISEIYGREVVVRDVNRFHHFKAGSCSCGDYW 680
           +TKNLRICGDCH A   IS+I  RE+++RD NRFH F+ G CSCGDYW
Sbjct: 643 ITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686

[Close]
BLAST of CmaCh16G003790 vs. ExPASy Swiss-Prot
Match: Q9LNU6 (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2)

HSP 1 Score: 502.7 bits (1293), Expect = 6.6e-141
Identity = 261/644 (40.53%), Postives = 374/644 (58.07%), Query Frame = 0 

Query: 75  SVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGDIDSSVAVFNRNSEP 134
           ++F+     +  K+G+Q+H    + GL+  A V   M   Y   G +  +  VF+R S+ 
Sbjct: 121 NLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK 180

Query: 135 SSLLFNSMIRAYA-----------------------------------RYGFAERTVATY 194
             +  ++++ AYA                                   R G+ +  V  +
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240

Query: 195 ISMHSWGFTGDYFTFPFVLKSSVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKC 254
             +H  GF  D  T   VL S  D   + MG+ +HG V++ GL  D  V +++ID+YGK 
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKS 300

Query: 255 GEINDARKVFDKMIVRDVSAWNALLAGYMKGGFIDAAVAIFERMPWR----NIVSWTTMI 314
           G +     +F++  + +    NA + G  + G +D A+ +FE    +    N+VSWT++I
Sbjct: 301 GHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSII 360

Query: 315 SGYSQSGLAQQALSLFDEMLKEDSGVRPNWVTIMSVLPACAQSSALDRGRRIHELACRMG 374
           +G +Q+G   +AL LF EM  + +GV+PN VTI S+LPAC   +AL  GR  H  A R+ 
Sbjct: 361 AGCAQNGKDIEALELFREM--QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH 420

Query: 375 LNSNASVLIALTAMYAKCGSLADARNCFNRLNRSEKSLVAWNTMITAYASYGHGREAVST 434
           L  N  V  AL  MYAKCG +  ++  FN +    K+LV WN+++  ++ +G  +E +S 
Sbjct: 421 LLDNVHVGSALIDMYAKCGRINLSQIVFNMM--PTKNLVCWNSLMNGFSMHGKAKEVMSI 480

Query: 435 FQEMIEAGIRPDDITFTGLLSACSHSGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLG 494
           F+ ++   ++PD I+FT LLSAC   GL D G  YF  MS  Y   PR EHY+C+V+LLG
Sbjct: 481 FESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLG 540

Query: 495 RAGRLAEASKLVDEMPMPAGPSIWGSLLAACRKYRNLEMAETAARKLFVLEPENTGNYVL 554
           RAG+L EA  L+ EMP      +WG+LL +CR   N+++AE AA KLF LEPEN G YVL
Sbjct: 541 RAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVL 600

Query: 555 LSNMYAEAGRWQEVDKLRAILTSQGTKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMF 614
           LSN+YA  G W EVD +R  + S G KK+PGCSWI+V  + +  L GD SHPQ  +I   
Sbjct: 601 LSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEK 660

Query: 615 LEALPEKMKAAGYTPDTSFVLHDISEEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKN 674
           ++ + ++M+ +G+ P+  F LHD+ E+E+E  L  HSEKLAV FG+LNTP  T ++V KN
Sbjct: 661 MDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKN 720

Query: 675 LRICGDCHTAMVFISEIYGREVVVRDVNRFHHFKAGSCSCGDYW 680
           LRICGDCH  + FIS   GRE+ +RD NRFHHFK G CSCGD+W
Sbjct: 721 LRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760

[Close]
BLAST of CmaCh16G003790 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 4.9e-136
Identity = 268/694 (38.62%), Postives = 376/694 (54.18%), Query Frame = 0 

Query: 92  VHAHMLLRGLEPTALVGSKMVAFYASSGDIDS---SVAVFNRNSEPSSLLFNSMIRAYAR 151
           +HA M+  GL  T    SK++ F   S   +    +++VF    EP+ L++N+M R +A 
Sbjct: 52  IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111

Query: 152 YGFAERTVATYISMHSWGFTGDYFTFPFVLKSSVDLLSVWMGKCVHGLVLRAGLQFDLYV 211
                  +  Y+ M S G   + +TFPFVLKS     +   G+ +HG VL+ G   DLYV
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171

Query: 212 ATSLIDLYGKCGEINDARKVFDK-------------------------------MIVRDV 271
            TSLI +Y + G + DA KVFDK                               + V+DV
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231

Query: 272 SAWNALLAG--------------------------------------------------- 331
            +WNA+++G                                                   
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291

Query: 332 -------------------YMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQA 391
                              Y K G ++ A  +FER+P+++++SW T+I GY+   L ++A
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351

Query: 392 LSLFDEMLKEDSGVRPNWVTIMSVLPACAQSSALDRGRRIHELACR--MGLNSNASVLIA 451
           L LF EML+  SG  PN VT++S+LPACA   A+D GR IH    +   G+ + +S+  +
Sbjct: 352 LLLFQEMLR--SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 411

Query: 452 LTAMYAKCGSLADARNCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIR 511
           L  MYAKCG +  A   FN +    KSL +WN MI  +A +G    +   F  M + GI+
Sbjct: 412 LIDMYAKCGDIEAAHQVFNSI--LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 471

Query: 512 PDDITFTGLLSACSHSGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASK 571
           PDDITF GLLSACSHSG++D+G + F  M+  Y   P+ EHY C++DLLG +G   EA +
Sbjct: 472 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 531

Query: 572 LVDEMPMPAGPSIWGSLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGR 631
           +++ M M     IW SLL AC+ + N+E+ E+ A  L  +EPEN G+YVLLSN+YA AGR
Sbjct: 532 MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGR 591

Query: 632 WQEVDKLRAILTSQGTKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKA 680
           W EV K RA+L  +G KK PGCS IE++   H F+ GD  HP+ +EIY  LE +   ++ 
Sbjct: 592 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 651

[Close]
BLAST of CmaCh16G003790 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.1e-135
Identity = 240/595 (40.34%), Postives = 358/595 (60.17%), Query Frame = 0 

Query: 86  LKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGDIDSSVAVFNRNSEPSSLLFNSMIRA 145
           L LGQ +H   +   +     V + ++  Y S GD+DS+  VF    E   + +NSMI  
Sbjct: 147 LSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 206

Query: 146 YARYGFAERTVATYISMHSWGFTGDYFTFPFVLKSSVDLLSVWMGKCVHGLVLRAGLQFD 205
           + + G  ++ +  +  M S      + T   VL +   + ++  G+ V   +    +  +
Sbjct: 207 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266

Query: 206 LYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAWNALLAGYMKGGFIDAAVAIFERMPW 265
           L +A +++D+Y KCG I DA+++FD M  +D   W  +L GY      +AA  +   MP 
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326

Query: 266 RNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSGVRPNWVTIMSVLPACAQSSALDRGR 325
           ++IV+W  +IS Y Q+G   +AL +F E L+    ++ N +T++S L ACAQ  AL+ GR
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHE-LQLQKNMKLNQITLVSTLSACAQVGALELGR 386

Query: 326 RIHELACRMGLNSNASVLIALTAMYAKCGSLADARNCFNRLNRSEKSLVAWNTMITAYAS 385
            IH    + G+  N  V  AL  MY+KCG L  +R  FN + +  + +  W+ MI   A 
Sbjct: 387 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK--RDVFVWSAMIGGLAM 446

Query: 386 YGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSHSGLVDIGLNYFNYMSTTYSTNPRAE 445
           +G G EAV  F +M EA ++P+ +TFT +  ACSH+GLVD   + F+ M + Y   P  +
Sbjct: 447 HGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 506

Query: 446 HYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWGSLLAACRKYRNLEMAETAARKLFVL 505
           HYAC+VD+LGR+G L +A K ++ MP+P   S+WG+LL AC+ + NL +AE A  +L  L
Sbjct: 507 HYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLEL 566

Query: 506 EPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQGTKKSPGCSWIEVNGKAHMFLGGDTS 565
           EP N G +VLLSN+YA+ G+W+ V +LR  +   G KK PGCS IE++G  H FL GD +
Sbjct: 567 EPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNA 626

Query: 566 HPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDISEEE-KEFNLIAHSEKLAVAFGILNT 625
           HP ++++Y  L  + EK+K+ GY P+ S VL  I EEE KE +L  HSEKLA+ +G+++T
Sbjct: 627 HPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIST 686

Query: 626 PSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVRDVNRFHHFKAGSCSCGDYW 680
            +  VIRV KNLR+CGDCH+    IS++Y RE++VRD  RFHHF+ G CSC D+W
Sbjct: 687 EAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738

[Close]
BLAST of CmaCh16G003790 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 5.4e-135
Identity = 247/629 (39.27%), Postives = 373/629 (59.30%), Query Frame = 0 

Query: 55  LRNLLQPLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAF 114
           L+  ++ LS   SP   +Y  +      ++ L    +VH H+L  G +    + +K++  
Sbjct: 62  LKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM 121

Query: 115 YASSGDIDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTF 174
           Y+  G +D +  VF++  + +  ++N++ RA    G  E  +  Y  M+  G   D FT+
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181

Query: 175 PFVLKSSV----DLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFD 234
            +VLK+ V     +  +  GK +H  + R G    +Y+ T+L+D+Y +            
Sbjct: 182 TYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARF----------- 241

Query: 235 KMIVRDVSAWNALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSL 294
                               G +D A  +F  MP RN+VSW+ MI+ Y+++G A +AL  
Sbjct: 242 --------------------GCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRT 301

Query: 295 FDEMLKEDSGVRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMY 354
           F EM++E     PN VT++SVL ACA  +AL++G+ IH    R GL+S   V+ AL  MY
Sbjct: 302 FREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMY 361

Query: 355 AKCGSLADARNCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDIT 414
            +CG L   +  F+R++  ++ +V+WN++I++Y  +G+G++A+  F+EM+  G  P  +T
Sbjct: 362 GRCGKLEVGQRVFDRMH--DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVT 421

Query: 415 FTGLLSACSHSGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEM 474
           F  +L ACSH GLV+ G   F  M   +   P+ EHYAC+VDLLGRA RL EA+K+V +M
Sbjct: 422 FVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 481

Query: 475 PMPAGPSIWGSLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVD 534
               GP +WGSLL +CR + N+E+AE A+R+LF LEP+N GNYVLL+++YAEA  W EV 
Sbjct: 482 RTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVK 541

Query: 535 KLRAILTSQGTKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTP 594
           +++ +L  +G +K PG  W+EV  K + F+  D  +P  ++I+ FL  L E MK  GY P
Sbjct: 542 RVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIP 601

Query: 595 DTSFVLHDISEEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFIS 654
            T  VL+++  EEKE  ++ HSEKLA+AFG++NT     IR+TKNLR+C DCH    FIS
Sbjct: 602 QTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFIS 657

Query: 655 EIYGREVVVRDVNRFHHFKAGSCSCGDYW 680
           +   +E++VRDVNRFH FK G CSCGDYW
Sbjct: 662 KFMEKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]
BLAST of CmaCh16G003790 vs. ExPASy TrEMBL
Match: A0A6J1J4H4 (pentatricopeptide repeat-containing protein At3g62890-like OS=Cucurbita maxima OX=3661 GN=LOC111483345 PE=3 SV=1)

HSP 1 Score: 1372.1 bits (3550), Expect = 0.0e+00
Identity = 679/679 (100.00%), Postives = 679/679 (100.00%), Query Frame = 0 

Query: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQ 60
           MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQ
Sbjct: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQ 60

Query: 61  PLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120
           PLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD
Sbjct: 61  PLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120

Query: 121 IDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKS 180
           IDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKS
Sbjct: 121 IDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKS 180

Query: 181 SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAW 240
           SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAW
Sbjct: 181 SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAW 240

Query: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300
           NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG
Sbjct: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300

Query: 301 VRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360
           VRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR
Sbjct: 301 VRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360

Query: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420
           NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH
Sbjct: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420

Query: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480
           SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG
Sbjct: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480

Query: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQG 540
           SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQG
Sbjct: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQG 540

Query: 541 TKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600
           TKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS
Sbjct: 541 TKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600

Query: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVR 660
           EEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVR
Sbjct: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVR 660

Query: 661 DVNRFHHFKAGSCSCGDYW 680
           DVNRFHHFKAGSCSCGDYW
Sbjct: 661 DVNRFHHFKAGSCSCGDYW 679

[Close]
BLAST of CmaCh16G003790 vs. ExPASy TrEMBL
Match: A0A6J1E4B5 (pentatricopeptide repeat-containing protein At3g62890-like OS=Cucurbita moschata OX=3662 GN=LOC111430653 PE=3 SV=1)

HSP 1 Score: 1347.0 bits (3485), Expect = 0.0e+00
Identity = 666/679 (98.09%), Postives = 671/679 (98.82%), Query Frame = 0 

Query: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQ 60
           MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSIS RSLSATLRNLLQ
Sbjct: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISPRSLSATLRNLLQ 60

Query: 61  PLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120
           PLSA D PPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD
Sbjct: 61  PLSAPDPPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120

Query: 121 IDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKS 180
           IDSSVAVFNR SEPSSLLFNSMIRAYARYGFAERTVATY SMHSWGFTGDYFTFPFVLKS
Sbjct: 121 IDSSVAVFNRISEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKS 180

Query: 181 SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAW 240
           SVDLLSVWMGKCVHGLVLRAGL+FDLYVATSLID+YGKCGEINDARKVFDKM VRDVS+W
Sbjct: 181 SVDLLSVWMGKCVHGLVLRAGLEFDLYVATSLIDMYGKCGEINDARKVFDKMTVRDVSSW 240

Query: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300
           NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG
Sbjct: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300

Query: 301 VRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360
           VRPNWVTIMSVLPACAQSSAL+RGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR
Sbjct: 301 VRPNWVTIMSVLPACAQSSALERGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360

Query: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420
           NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH
Sbjct: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420

Query: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480
           SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG
Sbjct: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480

Query: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQG 540
           SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIL SQG
Sbjct: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILISQG 540

Query: 541 TKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600
           TKKSPGCSWIEVNG AHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS
Sbjct: 541 TKKSPGCSWIEVNGIAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600

Query: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVR 660
           EEEKEFNLIAHSEKLAVAFGILNTPSETV+RVTKNLRICGDCHTAMVFISEIYGREVVVR
Sbjct: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVLRVTKNLRICGDCHTAMVFISEIYGREVVVR 660

Query: 661 DVNRFHHFKAGSCSCGDYW 680
           DVNRFHHFKAGSCSCGDYW
Sbjct: 661 DVNRFHHFKAGSCSCGDYW 679

[Close]
BLAST of CmaCh16G003790 vs. ExPASy TrEMBL
Match: A0A0A0KEZ1 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G430650 PE=3 SV=1)

HSP 1 Score: 1237.6 bits (3201), Expect = 0.0e+00
Identity = 602/679 (88.66%), Postives = 637/679 (93.81%), Query Frame = 0 

Query: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQ 60
           M NGIRLSI IP P+ LLFRILHSY GS+HID  PPPSSPPFKCSIS  ++SATL+NLLQ
Sbjct: 1   MHNGIRLSISIPTPSHLLFRILHSYSGSAHIDTVPPPSSPPFKCSISPLTISATLQNLLQ 60

Query: 61  PLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120
           PLSA   PPILSYA VFQFLTG N+LKLG QVHAHMLLRGL+PTALVGSKMVAFYASSGD
Sbjct: 61  PLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGD 120

Query: 121 IDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKS 180
           IDSSV+VFN   EPSSLLFNSMIRAYARYGFAERTVATY SMHSWGFTGDYFTFPFVLKS
Sbjct: 121 IDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKS 180

Query: 181 SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAW 240
           SV+LLSVWMGKCVHGL+LR GLQFDLYVATSLI LYGKCGEINDA KVFD M +RDVS+W
Sbjct: 181 SVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSW 240

Query: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300
           NALLAGY K G IDAA+AIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEM+KEDSG
Sbjct: 241 NALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSG 300

Query: 301 VRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360
           VRPNWVTIMSVLPACAQ S L+RGR+IHELACRMGLNSNASVLIALTAMYAKCGSL DAR
Sbjct: 301 VRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDAR 360

Query: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420
           NCF++LNR+EK+L+AWNTMITAYASYGHG +AVSTF+EMI+AGI+PDDITFTGLLS CSH
Sbjct: 361 NCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSH 420

Query: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480
           SGLVD+GL YFN+MSTTYS NPR EHYACV DLLGRAGRLAEASKLV EMPMPAGPSIWG
Sbjct: 421 SGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWG 480

Query: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQG 540
           SLLAACRK+RNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAI+ SQG
Sbjct: 481 SLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQG 540

Query: 541 TKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600
           TKKSPGCSWIE+NGKAHMFLGGDTSHPQ KEIYMFLEALPEKMKAAGY PDTS+VLHDIS
Sbjct: 541 TKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDIS 600

Query: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVR 660
           EEEKEFNLIAHSEKLAVAFGILNTP+ETV+RVTKNLRICGDCHTAMVFISEIYGREV+VR
Sbjct: 601 EEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVR 660

Query: 661 DVNRFHHFKAGSCSCGDYW 680
           D+NRFHHFK G CSCGDYW
Sbjct: 661 DINRFHHFKGGCCSCGDYW 679

[Close]
BLAST of CmaCh16G003790 vs. ExPASy TrEMBL
Match: A0A5A7TCM1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001170 PE=3 SV=1)

HSP 1 Score: 1231.1 bits (3184), Expect = 0.0e+00
Identity = 600/679 (88.37%), Postives = 633/679 (93.23%), Query Frame = 0 

Query: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQ 60
           M NGIRLSI IP P  LLFRILHSY GS+HI+  PPPSSP FKCSIS  ++SATL+NLLQ
Sbjct: 1   MHNGIRLSISIPTPTLLLFRILHSYSGSAHIETVPPPSSPLFKCSISPLTISATLQNLLQ 60

Query: 61  PLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120
           PLSA   PPILSYA VFQFLTG N+LKLG QVHAHMLLRGL+PTALVGSKMVAFYASSGD
Sbjct: 61  PLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGD 120

Query: 121 IDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKS 180
           IDSSV+VFN   EPSSLLFNSMIRAYARYGFAERTVATY SMHSWGFTGDYFTFPFVLKS
Sbjct: 121 IDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKS 180

Query: 181 SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAW 240
           S DLLSVWMGKCVHGL+LR GL  DLYVATSLIDLYGKCGEIN+A KVFD M +RDVS+W
Sbjct: 181 SADLLSVWMGKCVHGLILRIGLHCDLYVATSLIDLYGKCGEINEAGKVFDNMTIRDVSSW 240

Query: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300
           NALLAGYMK G IDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEM+KEDSG
Sbjct: 241 NALLAGYMKSGCIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMMKEDSG 300

Query: 301 VRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360
           VRPNWVTIMSVLPACAQ S L+RG +IHELACRMGLNSNASVLIALTAMYAKCGSL DAR
Sbjct: 301 VRPNWVTIMSVLPACAQLSTLERGTQIHELACRMGLNSNASVLIALTAMYAKCGSLVDAR 360

Query: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420
           NCF++LNRSEK+L+AWNTMITAYASYGHG EAVSTF+EMI+AGI+PDDITFTGLLS CSH
Sbjct: 361 NCFDKLNRSEKNLIAWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSH 420

Query: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480
           SGLVD+GL YFN+MSTTYS NPR EHYACV DLLGRAGRLAEASKLVDEMPMPAG SIWG
Sbjct: 421 SGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVDEMPMPAGASIWG 480

Query: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQG 540
           SLLAACRK+RNLEMAE AARKLFVLEPEN+GNYVLLSNMYAEAGRWQEVDKLRAI+ SQG
Sbjct: 481 SLLAACRKHRNLEMAEIAARKLFVLEPENSGNYVLLSNMYAEAGRWQEVDKLRAIVKSQG 540

Query: 541 TKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600
           TKKSPGCSWIE+NGKAHMFLGGDTSHPQ KEIYMFLEALPEKMKAAGY PDTS+VLHDIS
Sbjct: 541 TKKSPGCSWIEINGKAHMFLGGDTSHPQVKEIYMFLEALPEKMKAAGYVPDTSYVLHDIS 600

Query: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVR 660
           EEEKEFNLIAHSEKLAVAFGILNTP+ETV+RVTKNLRICGDCHTAMVFISEIYGREV+VR
Sbjct: 601 EEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVR 660

Query: 661 DVNRFHHFKAGSCSCGDYW 680
           D+NRFHHFK GSCSCGDYW
Sbjct: 661 DINRFHHFKGGSCSCGDYW 679

[Close]
BLAST of CmaCh16G003790 vs. ExPASy TrEMBL
Match: A0A1S3C2H6 (pentatricopeptide repeat-containing protein At3g62890-like OS=Cucumis melo OX=3656 GN=LOC103496117 PE=3 SV=1)

HSP 1 Score: 1230.7 bits (3183), Expect = 0.0e+00
Identity = 599/679 (88.22%), Postives = 633/679 (93.23%), Query Frame = 0 

Query: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQ 60
           M NGIRLSI IP P  LLFRILHSY GS+HI+  PPPSSP FKCSIS  ++SATL+NLLQ
Sbjct: 1   MHNGIRLSISIPTPTLLLFRILHSYSGSAHIETVPPPSSPLFKCSISPLTISATLQNLLQ 60

Query: 61  PLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120
           PLSA   PPILSYA VFQFLTG N+LKLG QVHAHMLLRGL+PTALVGSKMVAFYASSGD
Sbjct: 61  PLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGD 120

Query: 121 IDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKS 180
           IDSSV+VFN   EPSSLLFNSMIRAYARYGFAERTVATY SMHSWGFTGDYFTFPFVLKS
Sbjct: 121 IDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKS 180

Query: 181 SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAW 240
           S DLLSVWMGKCVHGL+LR GL  DLYVATSLIDLYGKCGEIN+A KVFD M +RDVS+W
Sbjct: 181 SADLLSVWMGKCVHGLILRIGLHCDLYVATSLIDLYGKCGEINEAGKVFDNMTIRDVSSW 240

Query: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300
           NALLAGYMK G +DAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEM+KEDSG
Sbjct: 241 NALLAGYMKSGCVDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMMKEDSG 300

Query: 301 VRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360
           VRPNWVTIMSVLPACAQ S L+RG +IHELACRMGLNSNASVLIALTAMYAKCGSL DAR
Sbjct: 301 VRPNWVTIMSVLPACAQLSTLERGTQIHELACRMGLNSNASVLIALTAMYAKCGSLVDAR 360

Query: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420
           NCF++LNRSEK+L+AWNTMITAYASYGHG EAVSTF+EMI+AGI+PDDITFTGLLS CSH
Sbjct: 361 NCFDKLNRSEKNLIAWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSH 420

Query: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480
           SGLVD+GL YFN+MSTTYS NPR EHYACV DLLGRAGRLAEASKLVDEMPMPAG SIWG
Sbjct: 421 SGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVDEMPMPAGASIWG 480

Query: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQG 540
           SLLAACRK+RNLEMAE AARKLFVLEPEN+GNYVLLSNMYAEAGRWQEVDKLRAI+ SQG
Sbjct: 481 SLLAACRKHRNLEMAEIAARKLFVLEPENSGNYVLLSNMYAEAGRWQEVDKLRAIVKSQG 540

Query: 541 TKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600
           TKKSPGCSWIE+NGKAHMFLGGDTSHPQ KEIYMFLEALPEKMKAAGY PDTS+VLHDIS
Sbjct: 541 TKKSPGCSWIEINGKAHMFLGGDTSHPQAKEIYMFLEALPEKMKAAGYVPDTSYVLHDIS 600

Query: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVR 660
           EEEKEFNLIAHSEKLAVAFGILNTP+ETV+RVTKNLRICGDCHTAMVFISEIYGREV+VR
Sbjct: 601 EEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVR 660

Query: 661 DVNRFHHFKAGSCSCGDYW 680
           D+NRFHHFK GSCSCGDYW
Sbjct: 661 DINRFHHFKGGSCSCGDYW 679

[Close]
BLAST of CmaCh16G003790 vs. NCBI nr
Match: XP_022985292.1 (pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita maxima])

HSP 1 Score: 1372.1 bits (3550), Expect = 0.0e+00
Identity = 679/679 (100.00%), Postives = 679/679 (100.00%), Query Frame = 0 

Query: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQ 60
           MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQ
Sbjct: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQ 60

Query: 61  PLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120
           PLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD
Sbjct: 61  PLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120

Query: 121 IDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKS 180
           IDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKS
Sbjct: 121 IDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKS 180

Query: 181 SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAW 240
           SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAW
Sbjct: 181 SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAW 240

Query: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300
           NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG
Sbjct: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300

Query: 301 VRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360
           VRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR
Sbjct: 301 VRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360

Query: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420
           NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH
Sbjct: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420

Query: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480
           SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG
Sbjct: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480

Query: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQG 540
           SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQG
Sbjct: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQG 540

Query: 541 TKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600
           TKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS
Sbjct: 541 TKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600

Query: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVR 660
           EEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVR
Sbjct: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVR 660

Query: 661 DVNRFHHFKAGSCSCGDYW 680
           DVNRFHHFKAGSCSCGDYW
Sbjct: 661 DVNRFHHFKAGSCSCGDYW 679

[Close]
BLAST of CmaCh16G003790 vs. NCBI nr
Match: XP_022922754.1 (pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita moschata])

HSP 1 Score: 1347.0 bits (3485), Expect = 0.0e+00
Identity = 666/679 (98.09%), Postives = 671/679 (98.82%), Query Frame = 0 

Query: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQ 60
           MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSIS RSLSATLRNLLQ
Sbjct: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISPRSLSATLRNLLQ 60

Query: 61  PLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120
           PLSA D PPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD
Sbjct: 61  PLSAPDPPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120

Query: 121 IDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKS 180
           IDSSVAVFNR SEPSSLLFNSMIRAYARYGFAERTVATY SMHSWGFTGDYFTFPFVLKS
Sbjct: 121 IDSSVAVFNRISEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKS 180

Query: 181 SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAW 240
           SVDLLSVWMGKCVHGLVLRAGL+FDLYVATSLID+YGKCGEINDARKVFDKM VRDVS+W
Sbjct: 181 SVDLLSVWMGKCVHGLVLRAGLEFDLYVATSLIDMYGKCGEINDARKVFDKMTVRDVSSW 240

Query: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300
           NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG
Sbjct: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300

Query: 301 VRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360
           VRPNWVTIMSVLPACAQSSAL+RGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR
Sbjct: 301 VRPNWVTIMSVLPACAQSSALERGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360

Query: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420
           NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH
Sbjct: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420

Query: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480
           SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG
Sbjct: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480

Query: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQG 540
           SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIL SQG
Sbjct: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILISQG 540

Query: 541 TKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600
           TKKSPGCSWIEVNG AHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS
Sbjct: 541 TKKSPGCSWIEVNGIAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600

Query: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVR 660
           EEEKEFNLIAHSEKLAVAFGILNTPSETV+RVTKNLRICGDCHTAMVFISEIYGREVVVR
Sbjct: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVLRVTKNLRICGDCHTAMVFISEIYGREVVVR 660

Query: 661 DVNRFHHFKAGSCSCGDYW 680
           DVNRFHHFKAGSCSCGDYW
Sbjct: 661 DVNRFHHFKAGSCSCGDYW 679

[Close]
BLAST of CmaCh16G003790 vs. NCBI nr
Match: XP_023552018.1 (pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1345.9 bits (3482), Expect = 0.0e+00
Identity = 667/679 (98.23%), Postives = 670/679 (98.67%), Query Frame = 0 

Query: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQ 60
           MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSIS RSLSATLRNLLQ
Sbjct: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISPRSLSATLRNLLQ 60

Query: 61  PLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120
           PLSA D PPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD
Sbjct: 61  PLSAPDPPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120

Query: 121 IDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKS 180
           IDSSVAVFNR SEPSSLLFNSMIRAYARYGFAERTVATY SMHSWGFTGDYFTFPFVLKS
Sbjct: 121 IDSSVAVFNRISEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKS 180

Query: 181 SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAW 240
           SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEI DARKVFDKM VRDVSAW
Sbjct: 181 SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEIKDARKVFDKMTVRDVSAW 240

Query: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300
           NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG
Sbjct: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300

Query: 301 VRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360
           VRPNWVTIMSVLPACAQSSAL+RGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR
Sbjct: 301 VRPNWVTIMSVLPACAQSSALERGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360

Query: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420
           NCFNRL+RSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH
Sbjct: 361 NCFNRLSRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420

Query: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480
           SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG
Sbjct: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480

Query: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQG 540
           SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIL SQG
Sbjct: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILISQG 540

Query: 541 TKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600
           TKKSPGCSWIEVNG AHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS
Sbjct: 541 TKKSPGCSWIEVNGIAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600

Query: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVR 660
           EEEKEFNLIAHSEKLAVAFGILNTPSETV+RVTKNLRICGDCHTAMVFISEIYGREVVVR
Sbjct: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVLRVTKNLRICGDCHTAMVFISEIYGREVVVR 660

Query: 661 DVNRFHHFKAGSCSCGDYW 680
           DVNRFHHFKAGSCSCGDYW
Sbjct: 661 DVNRFHHFKAGSCSCGDYW 679

[Close]
BLAST of CmaCh16G003790 vs. NCBI nr
Match: KAG6576977.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014995.1 putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1342.8 bits (3474), Expect = 0.0e+00
Identity = 665/679 (97.94%), Postives = 669/679 (98.53%), Query Frame = 0 

Query: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQ 60
           MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSIS RSLSATLRNLLQ
Sbjct: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISPRSLSATLRNLLQ 60

Query: 61  PLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120
           PLSA D PPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD
Sbjct: 61  PLSAPDPPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120

Query: 121 IDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKS 180
           IDSSVAVFNR SEPSSLLFNSMIRAYARYGFAERTVATY SMHSWGFTGDYFTFPFVLKS
Sbjct: 121 IDSSVAVFNRISEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKS 180

Query: 181 SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAW 240
           SVDLLSVWMGKCVHGLVLRAGL+FDLYVATSLID+YGKCGEINDARKVFDKM VRDVSAW
Sbjct: 181 SVDLLSVWMGKCVHGLVLRAGLEFDLYVATSLIDMYGKCGEINDARKVFDKMTVRDVSAW 240

Query: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300
           NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG
Sbjct: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300

Query: 301 VRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360
           VRPNWVTIMSVLPACAQSSAL+RGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR
Sbjct: 301 VRPNWVTIMSVLPACAQSSALERGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360

Query: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420
           NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH
Sbjct: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420

Query: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480
           SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPM AGPSIWG
Sbjct: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMAAGPSIWG 480

Query: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQG 540
           SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIL SQG
Sbjct: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILISQG 540

Query: 541 TKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600
           TKKSPGCSWIEVNG AHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS
Sbjct: 541 TKKSPGCSWIEVNGIAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600

Query: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVR 660
           EEEKEFNLIAHSEKLAVAFGILNTPSETV+RVTKNLRICGDCHTAMVFISEIYGREVVVR
Sbjct: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVLRVTKNLRICGDCHTAMVFISEIYGREVVVR 660

Query: 661 DVNRFHHFKAGSCSCGDYW 680
           DVNRFHHFKAG CSCGDYW
Sbjct: 661 DVNRFHHFKAGLCSCGDYW 679

[Close]
BLAST of CmaCh16G003790 vs. NCBI nr
Match: XP_004140278.1 (pentatricopeptide repeat-containing protein At3g62890 [Cucumis sativus] >KGN48088.1 hypothetical protein Csa_004060 [Cucumis sativus])

HSP 1 Score: 1237.6 bits (3201), Expect = 0.0e+00
Identity = 602/679 (88.66%), Postives = 637/679 (93.81%), Query Frame = 0 

Query: 1   MLNGIRLSIFIPNPNRLLFRILHSYLGSSHIDIAPPPSSPPFKCSISRRSLSATLRNLLQ 60
           M NGIRLSI IP P+ LLFRILHSY GS+HID  PPPSSPPFKCSIS  ++SATL+NLLQ
Sbjct: 1   MHNGIRLSISIPTPSHLLFRILHSYSGSAHIDTVPPPSSPPFKCSISPLTISATLQNLLQ 60

Query: 61  PLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGD 120
           PLSA   PPILSYA VFQFLTG N+LKLG QVHAHMLLRGL+PTALVGSKMVAFYASSGD
Sbjct: 61  PLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGD 120

Query: 121 IDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKS 180
           IDSSV+VFN   EPSSLLFNSMIRAYARYGFAERTVATY SMHSWGFTGDYFTFPFVLKS
Sbjct: 121 IDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKS 180

Query: 181 SVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAW 240
           SV+LLSVWMGKCVHGL+LR GLQFDLYVATSLI LYGKCGEINDA KVFD M +RDVS+W
Sbjct: 181 SVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSW 240

Query: 241 NALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSG 300
           NALLAGY K G IDAA+AIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEM+KEDSG
Sbjct: 241 NALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSG 300

Query: 301 VRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMYAKCGSLADAR 360
           VRPNWVTIMSVLPACAQ S L+RGR+IHELACRMGLNSNASVLIALTAMYAKCGSL DAR
Sbjct: 301 VRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDAR 360

Query: 361 NCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSH 420
           NCF++LNR+EK+L+AWNTMITAYASYGHG +AVSTF+EMI+AGI+PDDITFTGLLS CSH
Sbjct: 361 NCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSH 420

Query: 421 SGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480
           SGLVD+GL YFN+MSTTYS NPR EHYACV DLLGRAGRLAEASKLV EMPMPAGPSIWG
Sbjct: 421 SGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWG 480

Query: 481 SLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQG 540
           SLLAACRK+RNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAI+ SQG
Sbjct: 481 SLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQG 540

Query: 541 TKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDIS 600
           TKKSPGCSWIE+NGKAHMFLGGDTSHPQ KEIYMFLEALPEKMKAAGY PDTS+VLHDIS
Sbjct: 541 TKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDIS 600

Query: 601 EEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVR 660
           EEEKEFNLIAHSEKLAVAFGILNTP+ETV+RVTKNLRICGDCHTAMVFISEIYGREV+VR
Sbjct: 601 EEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVR 660

Query: 661 DVNRFHHFKAGSCSCGDYW 680
           D+NRFHHFK G CSCGDYW
Sbjct: 661 DINRFHHFKGGCCSCGDYW 679

[Close]
BLAST of CmaCh16G003790 vs. TAIR 10
Match: AT1G20230.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 502.7 bits (1293), Expect = 4.7e-142
Identity = 261/644 (40.53%), Postives = 374/644 (58.07%), Query Frame = 0 

Query: 75  SVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGDIDSSVAVFNRNSEP 134
           ++F+     +  K+G+Q+H    + GL+  A V   M   Y   G +  +  VF+R S+ 
Sbjct: 121 NLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK 180

Query: 135 SSLLFNSMIRAYA-----------------------------------RYGFAERTVATY 194
             +  ++++ AYA                                   R G+ +  V  +
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240

Query: 195 ISMHSWGFTGDYFTFPFVLKSSVDLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKC 254
             +H  GF  D  T   VL S  D   + MG+ +HG V++ GL  D  V +++ID+YGK 
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKS 300

Query: 255 GEINDARKVFDKMIVRDVSAWNALLAGYMKGGFIDAAVAIFERMPWR----NIVSWTTMI 314
           G +     +F++  + +    NA + G  + G +D A+ +FE    +    N+VSWT++I
Sbjct: 301 GHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSII 360

Query: 315 SGYSQSGLAQQALSLFDEMLKEDSGVRPNWVTIMSVLPACAQSSALDRGRRIHELACRMG 374
           +G +Q+G   +AL LF EM  + +GV+PN VTI S+LPAC   +AL  GR  H  A R+ 
Sbjct: 361 AGCAQNGKDIEALELFREM--QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH 420

Query: 375 LNSNASVLIALTAMYAKCGSLADARNCFNRLNRSEKSLVAWNTMITAYASYGHGREAVST 434
           L  N  V  AL  MYAKCG +  ++  FN +    K+LV WN+++  ++ +G  +E +S 
Sbjct: 421 LLDNVHVGSALIDMYAKCGRINLSQIVFNMM--PTKNLVCWNSLMNGFSMHGKAKEVMSI 480

Query: 435 FQEMIEAGIRPDDITFTGLLSACSHSGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLG 494
           F+ ++   ++PD I+FT LLSAC   GL D G  YF  MS  Y   PR EHY+C+V+LLG
Sbjct: 481 FESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLG 540

Query: 495 RAGRLAEASKLVDEMPMPAGPSIWGSLLAACRKYRNLEMAETAARKLFVLEPENTGNYVL 554
           RAG+L EA  L+ EMP      +WG+LL +CR   N+++AE AA KLF LEPEN G YVL
Sbjct: 541 RAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVL 600

Query: 555 LSNMYAEAGRWQEVDKLRAILTSQGTKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMF 614
           LSN+YA  G W EVD +R  + S G KK+PGCSWI+V  + +  L GD SHPQ  +I   
Sbjct: 601 LSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEK 660

Query: 615 LEALPEKMKAAGYTPDTSFVLHDISEEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKN 674
           ++ + ++M+ +G+ P+  F LHD+ E+E+E  L  HSEKLAV FG+LNTP  T ++V KN
Sbjct: 661 MDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKN 720

Query: 675 LRICGDCHTAMVFISEIYGREVVVRDVNRFHHFKAGSCSCGDYW 680
           LRICGDCH  + FIS   GRE+ +RD NRFHHFK G CSCGD+W
Sbjct: 721 LRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760

[Close]
BLAST of CmaCh16G003790 vs. TAIR 10
Match: AT3G49142.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 502.7 bits (1293), Expect = 4.7e-142
Identity = 267/648 (41.20%), Postives = 379/648 (58.49%), Query Frame = 0 

Query: 79  FLTGQNL-----LKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGDIDSSVAVFNRNSE 138
           FL GQ L     ++  + VH+ ++L  L   + +G K++  YAS  D+ S+  VF+   E
Sbjct: 43  FLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPE 102

Query: 139 PSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTFPFVLKSSVDLLSVWMGKCV 198
            + ++ N MIR+Y   GF    V  + +M       D++TFP VLK+     ++ +G+ +
Sbjct: 103 RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI 162

Query: 199 HGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAWNALLAGYMKGGFI 258
           HG   + GL   L+V   L+ +YGKCG +++AR V D+M  RDV +WN+L+ GY +    
Sbjct: 163 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF 222

Query: 259 DAAVAI-------------------------------------FERMPWRNIVSWTTMIS 318
           D A+ +                                     F +M  +++VSW  MI 
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIG 282

Query: 319 GYSQSGLAQQALSLFDEMLKEDSGVRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGL 378
            Y ++ +  +A+ L+  M  E  G  P+ V+I SVLPAC  +SAL  G++IH    R  L
Sbjct: 283 VYMKNAMPVEAVELYSRM--EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKL 342

Query: 379 NSNASVLIALTAMYAKCGSLADARNCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTF 438
             N  +  AL  MYAKCG L  AR+ F   N   + +V+W  MI+AY   G G +AV+ F
Sbjct: 343 IPNLLLENALIDMYAKCGCLEKARDVFE--NMKSRDVVSWTAMISAYGFSGRGCDAVALF 402

Query: 439 QEMIEAGIRPDDITFTGLLSACSHSGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGR 498
            ++ ++G+ PD I F   L+ACSH+GL++ G + F  M+  Y   PR EH AC+VDLLGR
Sbjct: 403 SKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGR 462

Query: 499 AGRLAEASKLVDEMPMPAGPSIWGSLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLL 558
           AG++ EA + + +M M     +WG+LL ACR + + ++   AA KLF L PE +G YVLL
Sbjct: 463 AGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLL 522

Query: 559 SNMYAEAGRWQEVDKLRAILTSQGTKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFL 618
           SN+YA+AGRW+EV  +R I+ S+G KK+PG S +EVN   H FL GD SHPQ+ EIY  L
Sbjct: 523 SNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYREL 582

Query: 619 EALPEKMKAAGYTPDTSFVLHDISEEEKEFNLIAHSEKLAVAFGILNTPSE-----TVIR 678
           + L +KMK  GY PD+   LHD+ EE+KE +L  HSEKLA+ F ++NT  E       IR
Sbjct: 583 DVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIR 642

Query: 679 VTKNLRICGDCHTAMVFISEIYGREVVVRDVNRFHHFKAGSCSCGDYW 680
           +TKNLRICGDCH A   IS+I  RE+++RD NRFH F+ G CSCGDYW
Sbjct: 643 ITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686

[Close]
BLAST of CmaCh16G003790 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 486.5 bits (1251), Expect = 3.5e-137
Identity = 268/694 (38.62%), Postives = 376/694 (54.18%), Query Frame = 0 

Query: 92  VHAHMLLRGLEPTALVGSKMVAFYASSGDIDS---SVAVFNRNSEPSSLLFNSMIRAYAR 151
           +HA M+  GL  T    SK++ F   S   +    +++VF    EP+ L++N+M R +A 
Sbjct: 52  IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111

Query: 152 YGFAERTVATYISMHSWGFTGDYFTFPFVLKSSVDLLSVWMGKCVHGLVLRAGLQFDLYV 211
                  +  Y+ M S G   + +TFPFVLKS     +   G+ +HG VL+ G   DLYV
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171

Query: 212 ATSLIDLYGKCGEINDARKVFDK-------------------------------MIVRDV 271
            TSLI +Y + G + DA KVFDK                               + V+DV
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231

Query: 272 SAWNALLAG--------------------------------------------------- 331
            +WNA+++G                                                   
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291

Query: 332 -------------------YMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQA 391
                              Y K G ++ A  +FER+P+++++SW T+I GY+   L ++A
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351

Query: 392 LSLFDEMLKEDSGVRPNWVTIMSVLPACAQSSALDRGRRIHELACR--MGLNSNASVLIA 451
           L LF EML+  SG  PN VT++S+LPACA   A+D GR IH    +   G+ + +S+  +
Sbjct: 352 LLLFQEMLR--SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 411

Query: 452 LTAMYAKCGSLADARNCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIR 511
           L  MYAKCG +  A   FN +    KSL +WN MI  +A +G    +   F  M + GI+
Sbjct: 412 LIDMYAKCGDIEAAHQVFNSI--LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 471

Query: 512 PDDITFTGLLSACSHSGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASK 571
           PDDITF GLLSACSHSG++D+G + F  M+  Y   P+ EHY C++DLLG +G   EA +
Sbjct: 472 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 531

Query: 572 LVDEMPMPAGPSIWGSLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGR 631
           +++ M M     IW SLL AC+ + N+E+ E+ A  L  +EPEN G+YVLLSN+YA AGR
Sbjct: 532 MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGR 591

Query: 632 WQEVDKLRAILTSQGTKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKA 680
           W EV K RA+L  +G KK PGCS IE++   H F+ GD  HP+ +EIY  LE +   ++ 
Sbjct: 592 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 651

[Close]
BLAST of CmaCh16G003790 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 485.3 bits (1248), Expect = 7.8e-137
Identity = 240/595 (40.34%), Postives = 358/595 (60.17%), Query Frame = 0 

Query: 86  LKLGQQVHAHMLLRGLEPTALVGSKMVAFYASSGDIDSSVAVFNRNSEPSSLLFNSMIRA 145
           L LGQ +H   +   +     V + ++  Y S GD+DS+  VF    E   + +NSMI  
Sbjct: 147 LSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 206

Query: 146 YARYGFAERTVATYISMHSWGFTGDYFTFPFVLKSSVDLLSVWMGKCVHGLVLRAGLQFD 205
           + + G  ++ +  +  M S      + T   VL +   + ++  G+ V   +    +  +
Sbjct: 207 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266

Query: 206 LYVATSLIDLYGKCGEINDARKVFDKMIVRDVSAWNALLAGYMKGGFIDAAVAIFERMPW 265
           L +A +++D+Y KCG I DA+++FD M  +D   W  +L GY      +AA  +   MP 
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326

Query: 266 RNIVSWTTMISGYSQSGLAQQALSLFDEMLKEDSGVRPNWVTIMSVLPACAQSSALDRGR 325
           ++IV+W  +IS Y Q+G   +AL +F E L+    ++ N +T++S L ACAQ  AL+ GR
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHE-LQLQKNMKLNQITLVSTLSACAQVGALELGR 386

Query: 326 RIHELACRMGLNSNASVLIALTAMYAKCGSLADARNCFNRLNRSEKSLVAWNTMITAYAS 385
            IH    + G+  N  V  AL  MY+KCG L  +R  FN + +  + +  W+ MI   A 
Sbjct: 387 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK--RDVFVWSAMIGGLAM 446

Query: 386 YGHGREAVSTFQEMIEAGIRPDDITFTGLLSACSHSGLVDIGLNYFNYMSTTYSTNPRAE 445
           +G G EAV  F +M EA ++P+ +TFT +  ACSH+GLVD   + F+ M + Y   P  +
Sbjct: 447 HGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 506

Query: 446 HYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWGSLLAACRKYRNLEMAETAARKLFVL 505
           HYAC+VD+LGR+G L +A K ++ MP+P   S+WG+LL AC+ + NL +AE A  +L  L
Sbjct: 507 HYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLEL 566

Query: 506 EPENTGNYVLLSNMYAEAGRWQEVDKLRAILTSQGTKKSPGCSWIEVNGKAHMFLGGDTS 565
           EP N G +VLLSN+YA+ G+W+ V +LR  +   G KK PGCS IE++G  H FL GD +
Sbjct: 567 EPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNA 626

Query: 566 HPQTKEIYMFLEALPEKMKAAGYTPDTSFVLHDISEEE-KEFNLIAHSEKLAVAFGILNT 625
           HP ++++Y  L  + EK+K+ GY P+ S VL  I EEE KE +L  HSEKLA+ +G+++T
Sbjct: 627 HPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIST 686

Query: 626 PSETVIRVTKNLRICGDCHTAMVFISEIYGREVVVRDVNRFHHFKAGSCSCGDYW 680
            +  VIRV KNLR+CGDCH+    IS++Y RE++VRD  RFHHF+ G CSC D+W
Sbjct: 687 EAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738

[Close]
BLAST of CmaCh16G003790 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 483.0 bits (1242), Expect = 3.9e-136
Identity = 247/629 (39.27%), Postives = 373/629 (59.30%), Query Frame = 0 

Query: 55  LRNLLQPLSALDSPPILSYASVFQFLTGQNLLKLGQQVHAHMLLRGLEPTALVGSKMVAF 114
           L+  ++ LS   SP   +Y  +      ++ L    +VH H+L  G +    + +K++  
Sbjct: 62  LKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM 121

Query: 115 YASSGDIDSSVAVFNRNSEPSSLLFNSMIRAYARYGFAERTVATYISMHSWGFTGDYFTF 174
           Y+  G +D +  VF++  + +  ++N++ RA    G  E  +  Y  M+  G   D FT+
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181

Query: 175 PFVLKSSV----DLLSVWMGKCVHGLVLRAGLQFDLYVATSLIDLYGKCGEINDARKVFD 234
            +VLK+ V     +  +  GK +H  + R G    +Y+ T+L+D+Y +            
Sbjct: 182 TYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARF----------- 241

Query: 235 KMIVRDVSAWNALLAGYMKGGFIDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSL 294
                               G +D A  +F  MP RN+VSW+ MI+ Y+++G A +AL  
Sbjct: 242 --------------------GCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRT 301

Query: 295 FDEMLKEDSGVRPNWVTIMSVLPACAQSSALDRGRRIHELACRMGLNSNASVLIALTAMY 354
           F EM++E     PN VT++SVL ACA  +AL++G+ IH    R GL+S   V+ AL  MY
Sbjct: 302 FREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMY 361

Query: 355 AKCGSLADARNCFNRLNRSEKSLVAWNTMITAYASYGHGREAVSTFQEMIEAGIRPDDIT 414
            +CG L   +  F+R++  ++ +V+WN++I++Y  +G+G++A+  F+EM+  G  P  +T
Sbjct: 362 GRCGKLEVGQRVFDRMH--DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVT 421

Query: 415 FTGLLSACSHSGLVDIGLNYFNYMSTTYSTNPRAEHYACVVDLLGRAGRLAEASKLVDEM 474
           F  +L ACSH GLV+ G   F  M   +   P+ EHYAC+VDLLGRA RL EA+K+V +M
Sbjct: 422 FVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 481

Query: 475 PMPAGPSIWGSLLAACRKYRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVD 534
               GP +WGSLL +CR + N+E+AE A+R+LF LEP+N GNYVLL+++YAEA  W EV 
Sbjct: 482 RTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVK 541

Query: 535 KLRAILTSQGTKKSPGCSWIEVNGKAHMFLGGDTSHPQTKEIYMFLEALPEKMKAAGYTP 594
           +++ +L  +G +K PG  W+EV  K + F+  D  +P  ++I+ FL  L E MK  GY P
Sbjct: 542 RVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIP 601

Query: 595 DTSFVLHDISEEEKEFNLIAHSEKLAVAFGILNTPSETVIRVTKNLRICGDCHTAMVFIS 654
            T  VL+++  EEKE  ++ HSEKLA+AFG++NT     IR+TKNLR+C DCH    FIS
Sbjct: 602 QTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFIS 657

Query: 655 EIYGREVVVRDVNRFHHFKAGSCSCGDYW 680
           +   +E++VRDVNRFH FK G CSCGDYW
Sbjct: 662 KFMEKEILVRDVNRFHRFKNGVCSCGDYW 657

The following BLAST results are available for this feature:
BLAST of CmaCh16G003790 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0C8996.6e-14141.20Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis th... [more]
Q9LNU66.6e-14140.53Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX... [more]
Q9LN014.9e-13638.62Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
O823801.1e-13540.34Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9STF35.4e-13539.27Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... [more]
BLAST of CmaCh16G003790 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J4H40.0e+00100.00pentatricopeptide repeat-containing protein At3g62890-like OS=Cucurbita maxima O... [more]
A0A6J1E4B50.0e+0098.09pentatricopeptide repeat-containing protein At3g62890-like OS=Cucurbita moschata... [more]
A0A0A0KEZ10.0e+0088.66DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G4306... [more]
A0A5A7TCM10.0e+0088.37Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3C2H60.0e+0088.22pentatricopeptide repeat-containing protein At3g62890-like OS=Cucumis melo OX=36... [more]
BLAST of CmaCh16G003790 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022985292.10.0e+00100.00pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita maxima][more]
XP_022922754.10.0e+0098.09pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita moschata][more]
XP_023552018.10.0e+0098.23pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita pepo subsp... [more]
KAG6576977.10.0e+0097.94putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... [more]
XP_004140278.10.0e+0088.66pentatricopeptide repeat-containing protein At3g62890 [Cucumis sativus] >KGN4808... [more]
BLAST of CmaCh16G003790 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G20230.14.7e-14240.53Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G49142.14.7e-14241.20Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G08070.13.5e-13738.62Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.17.8e-13740.34Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G46790.13.9e-13639.27Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 545..669
e-value: 8.2E-44
score: 148.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 193..266
e-value: 5.5E-16
score: 60.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 267..331
e-value: 1.5E-8
score: 36.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 340..571
e-value: 1.1E-36
score: 128.9
coord: 64..192
e-value: 1.6E-10
score: 42.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 267..529
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 210..238
e-value: 3.4E-5
score: 21.7
coord: 269..304
e-value: 7.2E-7
score: 27.0
coord: 374..407
e-value: 2.1E-8
score: 31.8
coord: 239..263
e-value: 0.0012
score: 16.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 447..470
e-value: 0.41
score: 11.0
coord: 139..167
e-value: 0.081
score: 13.2
coord: 210..236
e-value: 7.9E-5
score: 22.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 372..419
e-value: 3.5E-12
score: 46.3
coord: 266..316
e-value: 2.7E-10
score: 40.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 372..406
score: 12.013642
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 267..301
score: 10.89559
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 205..239
score: 9.810421
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 64..665
NoneNo IPR availablePANTHERPTHR47926:SF79SUBFAMILY NOT NAMEDcoord: 64..665

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G003790.1CmaCh16G003790.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding