CmaCh16G002760 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G002760
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionMADS-box protein SVP-like
LocationCma_Chr16: 1285453 .. 1289507 (+)
RNA-Seq ExpressionCmaCh16G002760
SyntenyCmaCh16G002760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGCTAATTAAAAACAAATTTAATCCATTAATTCAAAATCAAATTCTTTTTCTTTTACCTCTTTTAGGTACATCACCCACTAACAAATTTGCTCATAAACCATTCCATTCCCTTTCATCTGTCCCAAAAAGGAAACCCTTTTTCCCCTTTTTCTCTCTCTAAAAATCCATGGTACCTGTTCATCAAGCTTCATAATTTGCAGCTCACCACCAAATCTGTAAGAAATTCACCTCTTTTTTGCTATGAATCTCTGTTTTCGTGTTCTTAATTGAACCGATCGTTGTTCTGACGATTAGGGTTTGTTTATTTTCGTAGATCGAGCAAATTTATACGGTTTATCGGTTCGTAAATTCATCGTTTTTCATGCAAATTACAGAAAATTTGGATCTGGGTCGAGTTGAAATATGACGAGACAAAAAATTCAGATTAAAAAAATCGATAATATAGCAGCTAGGCAAGTGACGTTTTCAAAGAGGAGAAGAGGGCTGTTCAAGAAAGCTCATGAACTTGCTACTCTCTGTGATGCTGATATTGCTCTCATTGTTTTTTCTGCTTCTGGGAAGCTCTTTGATTATTCTAGCTCAAGGTAATTTTCTCTTTCTCTCTCTAAAAATTTACTGTTTTTTATTTATTTATTTTATTTTAATGAATTTGTTCTTGTTTTTGGCTTGGATTTAGGGATTATTGAATTAAATTAATAAGGAATTTGATATAAAGATTGGGTTTTTAGGCTTTTTTTTTTGTTGAAATTGTGGGTGTTTTTGTCTAAAAAAACATGTTTTTTTAGTTAAAGATGTGATTTTTATGGTTTGAATTATTGTAAAAAACATTTATTTATTAGTAAAATGAATTTAATTACATTTTTTTTCAATATAATTCTTTATTTTTTTTATTTTATGAAGGAAATAATGTTTAAATTCATATTGTTTTTATAGTTTATATGGGAAAAAAATGGTATTTTAAAATGACCTGCAAACCCATGACATCATAAGTGACATGTTAAATGTCTTAAATTTTGTTCCAAAAAAACATGAAATTGTTTGCAACTTGTCCTAGAATCTCTCTCTCATAATGTTTGGTTTTCTCTCCCTCTAATTATGGGGTTTGTCTGTACTAATTTGTAAATATCAAAAGTTTCTATGTAAAGAAAAAAAAAATATCTTTTGAAATTGTACCGAAAATTATTTATATAATCAAAATTGTATCGGCTCAAGCTCACTGCTAGTAGATATTGTCTGTTTTATCTCGATATGTATCGTTATCAGCCTCGCGTTTTTAAAACGAATCTACTAAGAAGAGGTTGTCACATTCTTATAAGTAATGTTTTATTTCGCTCTCCAACTAATATGGATCTTAAGTGATTGATGTCATGAATAACCTTAATTCTTACACCGTCGTTGTCCTATCCTTTTTTATCTTATTTAATCGAATTCTCGAAGAATATTTTTTAAAATAATTTCAAAGTTCAAAGGTAAAAATGAAAATTTTTAAAAAGACTAATTCTTTTATATTTTTAGCGTGTTTACAAAGGTAACCGGTTAGGTGGACTTTGACTTTTGAAACGATACGTTGGACCGAGTCAAGAATGAAAAACGTCCACTAACGCCCTTTAAAAGGGATAAAATCTTTTTTAGATTAACAGAAATCTCTCTCTAGCAAAAACATTTTAAAACAATGAGGCCAAGGACTAAAATGGACAATATCTACTAGCGGTAGCCTTACAAATTTGAATTCCGACCTTAGAAAAAGAGTATGTATCAATTATCGTTGAGTTATATTATATAGTTTTATCATATTCTCGAAAAATGTTTTTTATTGCATGAAGCATGCACGAGTTACTTGGAAGACATAATAAGCTACCAGAGGTGAATAACTTTTGCCAACCTCAATATCAGGTGAGTTCAAATTCGAAATTCCGACCTTTTGATCGATGATATATATATAGTCATACCCATATGCTTAGGTTGGCACCGTAAGGCGGTTGTTGCTTTGGTTAATCGTTTTTAGGGTTTATTTAGCAGATGGAAAAGAGTGTGTGTGCTAATTTGAGAGAGGAATTTGCAGCCAAAACCAAAGAACTTAGGTAACATTACTAAAATCTTTATAAATTATAGGGAAAAAAGAGTCTGATTTTGTGTTAAAACTATGAACAAGGCATATGAAGGGAGAAGAACTTCAAGAACTGGGAATAGAAGAATTAAAGAAGCTCGAGAAATTGCTCGAGATTGGTTTGAATCGTGTCTTAGAGACAAAGGTTCGTAATTCATACCAAGTTTTATTCGGTAGTTAACCTTATGATCATCAAATTATGTTATAAGTCGGAGATTTTGTGTGTTGTTCTTGCAGGATGAAAAGTTTCTAAAAGAGATCGATGCTGTGAAGGAGAAGGTCGATAATCGATTTTTGAAAATTACGCTTATAATCACTACTTCTACGTAACACAACGGCTATTCTTACGAATATTTTTATGCTTTTAAAAACTTGTTCGAATTTGGCTAAGAATTCAAGTGTTTACATGAGTTTCAAGAACAAAATGGATCATCGAAAAGGGTCTTAAATATTCTCGAGCACGAACGATAATAATGCGAACCCGCTTCATATAATACATGAATATTGATTGCAGGAAGCTTTGCTGATGAAAGAGAATCAGAGACTGAGGAATCAAGTGAGAGCTTTGAATAGAGATCAGCAAGAACAGCAAGCAGTGGGTGTTGGTGGGAGCTCCTTGGGCTCAAAGTCAATCACTAGCAATAGCAGCTCCTCACCAAACCCTAGTTCTCAAGATTGTGATGATATTTCTCTCAAATTGGGGTTAGTAGTTTTCTTGCATGCACTACATAAAAGGCATTTGAATCCCTTTTTTTGTTTTTTTGGAGATTAAAAGACTTTATCGATTTGAAATGATTGTTTAAGTGCTTAAGAATGGCTCATGAAAATAAGACGTTTCAAATAAGCCTTGAGATAGGTTCATTGGTACGACTCGGTTCGAACATTCCTTTAGAAATGGTGACTTAAAGATCTCTTTAGAATGAAGACTATCTTCACAGACCAGCATATGTCATTTTAGTATGTTTTGTCGTCATTAACATGCTTTTTAGACCAACATGGGTCATTTTAGTATGTTTTGTCCTCATTCACATGTTTTTTAGACCGACATGGGTCATTTTAGTATGTTTTGTTCTCATTCACATGTTTTTTAGACCAACACGAGTCATTTTATTATAGAAAAGTTTCTAAGATGTCACTCAATACAGAATTGCTCCAGTGAAAGCAAGTTTAATTTTAGAGTTCTTATGGAAGTCTGTTTTAACCATCACATCCTCAAGATCGCTCTCATTTGAATATGATCTCGATTCATTCATGTACCTGTCCTTTACTCGTGTGTAAAAATGATTTGAAAGATTGTGGGATATTCGAGAAATAACTATACCAAATAACAGTTCAAAATGTTCTAGAAAGGTAGCTAAACAACTTTCAAAAGGACTATAACCATTCAAACAAAGTGAGTGAGTTTCTTGCAGAGAAAAAAGATCTGTGTGTACAAAGAGATGACAATTAATATATGTTTGCCTCTATATGCAGTCTTTGAAGGCTCAAAGTATGCGATTCTCTGCAGCAGCTAGGCAATGCAAGCTCAGCCTTCTCTAATGGAGCTTTTACTAATCACTGGACTGCCAAAGCCACTCCTATTTGCATACAGAAAATAAGGATGTGAAAAGGCCAATTCATTCAATATCATATCATGTTTTCAAAGCAGAAATGAGTTACATACATGAATATTTGTTTCTGCATACCAATTGATCAACAGTTGATGAAACTTTGAAAGGGAGTTTTATAAGGAAAATGACACTTTTCAGACAAAGTAAACGAACCTGCTTGCCTGCTGGCTTTTGTAGCATCTGGAAGCACATGCATTACATGGGTTTTTCCTTTTTGAGTTTTTTCTCCAGGCTTTAAAACGTGTCTATTAGGGAGAGGTTTCCCCATCTTTATAAATAATACTTTGTTCTCCTCTCTAACCGATATAAGATCTCACAATTCACCCCCCTTTCG

mRNA sequence

AAAAGCTAATTAAAAACAAATTTAATCCATTAATTCAAAATCAAATTCTTTTTCTTTTACCTCTTTTAGGTACATCACCCACTAACAAATTTGCTCATAAACCATTCCATTCCCTTTCATCTGTCCCAAAAAGGAAACCCTTTTTCCCCTTTTTCTCTCTCTAAAAATCCATGGTACCTGTTCATCAAGCTTCATAATTTGCAGCTCACCACCAAATCTATCGAGCAAATTTATACGGTTTATCGGTTCGTAAATTCATCGTTTTTCATGCAAATTACAGAAAATTTGGATCTGGGTCGAGTTGAAATATGACGAGACAAAAAATTCAGATTAAAAAAATCGATAATATAGCAGCTAGGCAAGTGACGTTTTCAAAGAGGAGAAGAGGGCTGTTCAAGAAAGCTCATGAACTTGCTACTCTCTGTGATGCTGATATTGCTCTCATTGTTTTTTCTGCTTCTGGGAAGCTCTTTGATTATTCTAGCTCAAGCATGCACGAGTTACTTGGAAGACATAATAAGCTACCAGAGGTGAATAACTTTTGCCAACCTCAATATCAGATGGAAAAGAGTGTGTGTGCTAATTTGAGAGAGGAATTTGCAGCCAAAACCAAAGAACTTAGGCATATGAAGGGAGAAGAACTTCAAGAACTGGGAATAGAAGAATTAAAGAAGCTCGAGAAATTGCTCGAGATTGGTTTGAATCGTGTCTTAGAGACAAAGGAAGCTTTGCTGATGAAAGAGAATCAGAGACTGAGGAATCAAGTGAGAGCTTTGAATAGAGATCAGCAAGAACAGCAAGCAGTGGGTGTTGGTGGGAGCTCCTTGGGCTCAAAGTCAATCACTAGCAATAGCAGCTCCTCACCAAACCCTAGTTCTCAAGATTGTGATGATATTTCTCTCAAATTGGGGTTATCTTTGAAGGCTCAAAGTATGCGATTCTCTGCAGCAGCTAGGCAATGCAAGCTCAGCCTTCTCTAATGGAGCTTTTACTAATCACTGGACTGCCAAAGCCACTCCTATTTGCATACAGAAAATAAGGATGTGAAAAGGCCAATTCATTCAATATCATATCATGTTTTCAAAGCAGAAATGAGTTACATACATGAATATTTGTTTCTGCATACCAATTGATCAACAGTTGATGAAACTTTGAAAGGGAGTTTTATAAGGAAAATGACACTTTTCAGACAAAGTAAACGAACCTGCTTGCCTGCTGGCTTTTGTAGCATCTGGAAGCACATGCATTACATGGGTTTTTCCTTTTTGAGTTTTTTCTCCAGGCTTTAAAACGTGTCTATTAGGGAGAGGTTTCCCCATCTTTATAAATAATACTTTGTTCTCCTCTCTAACCGATATAAGATCTCACAATTCACCCCCCTTTCG

Coding sequence (CDS)

ATGACGAGACAAAAAATTCAGATTAAAAAAATCGATAATATAGCAGCTAGGCAAGTGACGTTTTCAAAGAGGAGAAGAGGGCTGTTCAAGAAAGCTCATGAACTTGCTACTCTCTGTGATGCTGATATTGCTCTCATTGTTTTTTCTGCTTCTGGGAAGCTCTTTGATTATTCTAGCTCAAGCATGCACGAGTTACTTGGAAGACATAATAAGCTACCAGAGGTGAATAACTTTTGCCAACCTCAATATCAGATGGAAAAGAGTGTGTGTGCTAATTTGAGAGAGGAATTTGCAGCCAAAACCAAAGAACTTAGGCATATGAAGGGAGAAGAACTTCAAGAACTGGGAATAGAAGAATTAAAGAAGCTCGAGAAATTGCTCGAGATTGGTTTGAATCGTGTCTTAGAGACAAAGGAAGCTTTGCTGATGAAAGAGAATCAGAGACTGAGGAATCAAGTGAGAGCTTTGAATAGAGATCAGCAAGAACAGCAAGCAGTGGGTGTTGGTGGGAGCTCCTTGGGCTCAAAGTCAATCACTAGCAATAGCAGCTCCTCACCAAACCCTAGTTCTCAAGATTGTGATGATATTTCTCTCAAATTGGGGTTATCTTTGAAGGCTCAAAGTATGCGATTCTCTGCAGCAGCTAGGCAATGCAAGCTCAGCCTTCTCTAA

Protein sequence

MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSSSMHELLGRHNKLPEVNNFCQPQYQMEKSVCANLREEFAAKTKELRHMKGEELQELGIEELKKLEKLLEIGLNRVLETKEALLMKENQRLRNQVRALNRDQQEQQAVGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGLSLKAQSMRFSAAARQCKLSLL
Homology
[Close]
BLAST of CmaCh16G002760 vs. ExPASy Swiss-Prot
Match: Q9FVC1 (MADS-box protein SVP OS=Arabidopsis thaliana OX=3702 GN=SVP PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.2e-37
Identity = 108/236 (45.76%), Postives = 139/236 (58.90%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KIQI+KIDN  ARQVTFSKRRRGLFKKA EL+ LCDAD+ALI+FS++GKLF++ SS
Sbjct: 1   MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60

Query: 61  SMHELLGRHN-KLPEVNNFCQPQYQM---EKSVCANLREEFAAKTKELRHMKGEELQELG 120
           SM E+L RHN +   +    QP  ++   E S  A + +E A K+  LR M+GEELQ L 
Sbjct: 61  SMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 120

Query: 121 IEELKKLEKLLEIGLNRVLETKE--------------ALLMKENQRLRNQVRALNRDQQ- 180
           IEEL++LEK LE GL RV+ETK                 LM EN+RLR Q   L  + + 
Sbjct: 121 IEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQGTQLTEENER 180

Query: 181 ---------------EQQAVGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 203
                          E +   V      S+SIT+  +S+  P   +  D SL+LGL
Sbjct: 181 LGMQICNNVHAHGGAESENAAVYEEGQSSESITNAGNSTGAPVDSESSDTSLRLGL 236

[Close]
BLAST of CmaCh16G002760 vs. ExPASy Swiss-Prot
Match: O82794 (MADS-box protein AGL24 OS=Arabidopsis thaliana OX=3702 GN=AGL24 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.2e-36
Identity = 102/221 (46.15%), Postives = 145/221 (65.61%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KI+IKKIDNI ARQVTFSKRRRG+FKKA EL+ LCDAD+ALI+FSA+GKLF++SSS
Sbjct: 1   MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60

Query: 61  SMHELLGRHN-KLPEVNNFCQP---QYQMEKSVCANLREEFAAKTKELRHMKGEELQELG 120
            M ++LGR++     +N    P     ++E    + L +E   KTK+LR ++GE+L  L 
Sbjct: 61  RMRDILGRYSLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLN 120

Query: 121 IEELKKLEKLLEIGLNRV--------------LETKEALLMKENQRLRNQVRALNRDQQE 180
           +EEL++LEKLLE GL+RV              LE + + L+ EN+RLR+++  L     E
Sbjct: 121 LEELQRLEKLLESGLSRVSEKKGECVMSQIFSLEKRGSELVDENKRLRDKLETL-----E 180

Query: 181 QQAVGVGGSSLGSKSITSNSSSSPNPSS-QDCDDISLKLGL 203
           +  +     +L ++S+T+N SS  + +  +D  D SLKLGL
Sbjct: 181 RAKLTTLKEALETESVTTNVSSYDSGTPLEDDSDTSLKLGL 216

[Close]
BLAST of CmaCh16G002760 vs. ExPASy Swiss-Prot
Match: Q9FUY6 (MADS-box protein JOINTLESS OS=Solanum lycopersicum OX=4081 GN=J PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.4e-36
Identity = 112/251 (44.62%), Postives = 146/251 (58.17%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KIQIKKIDN  ARQVTFSKRRRGLFKKA EL+ LCDAD+ALI+FS++GKLFDYSSS
Sbjct: 1   MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSS 60

Query: 61  SMHELLGR---HNKLPEVNNFCQPQYQM---EKSVCANLREEFAAKTKELRHMKGEELQE 120
           SM ++L R   H+K   +    QP  ++   E S  + L +E + K+  LR M+GEELQ 
Sbjct: 61  SMKQILERRDLHSK--NLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQG 120

Query: 121 LGIEELKKLEKLLEIGLNRVLE--------------TKEALLMKENQRLRNQVRAL---- 180
           L IEEL++LE+ LE GL+RV+E               K   LM+EN++LR QV  +    
Sbjct: 121 LNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVMEISNNN 180

Query: 181 NRDQQEQQAVGV-------------GGSSLGSKSITSNSSS-SPNPSSQDCDDISLKLGL 214
           N +    +  GV                   S+S+T+  +S  P P   D  D SLKLGL
Sbjct: 181 NNNNNGYREAGVVIFEPENGFNNNNNEDGQSSESVTNPCNSIDPPPQDDDSSDTSLKLGL 240

[Close]
BLAST of CmaCh16G002760 vs. ExPASy Swiss-Prot
Match: Q5K4R0 (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS47 PE=1 SV=3)

HSP 1 Score: 149.1 bits (375), Expect = 6.1e-35
Identity = 96/225 (42.67%), Postives = 136/225 (60.44%), Query Frame = 0 

Query: 3   RQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSSSM 62
           R++I I++IDN+AARQVTFSKRRRGLFKKA EL+ LCDA++ L+VFSA+GKLF ++S+SM
Sbjct: 22  RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSM 81

Query: 63  HELLGRHNKLPEVNNFCQPQ----YQMEKSVCANLREEFAAKTKELRHMKGEELQELGIE 122
            +++ R+N   +     +P        + S CA L+EE A  +  LR M+GEEL  L +E
Sbjct: 82  EQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVE 141

Query: 123 ELKKLEKLLEIGLNRVLET--------------KEALLMKENQRLRNQVRALNRDQQEQQ 182
           +L++LEK LE GL  VL+T              K   L++EN RL+ Q++     + E+ 
Sbjct: 142 QLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQLQVSRMSRMEEM 201

Query: 183 AVG-----VGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGLSL 205
             G     V      S+S+T+ S   P P +    D SL+LGLSL
Sbjct: 202 QPGPDSEIVYEEGQSSESVTNASYPRPPPDNDYSSDTSLRLGLSL 246

[Close]
BLAST of CmaCh16G002760 vs. ExPASy Swiss-Prot
Match: Q9XJ66 (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS22 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-32
Identity = 100/226 (44.25%), Postives = 141/226 (62.39%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R++ +IK+I++ AARQVTFSKRRRGLFKKA EL+ LCDAD+ALIVFS++GKL  ++SS
Sbjct: 1   MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60

Query: 61  SMHELLGRHNKLPEVNNFCQPQ-----YQMEKSVCANLREEFAAKTKELRHMKGEELQEL 120
           SM+E++ ++N     NN  + +       +E S  A+L E+ A  +  LR M+GEEL+ L
Sbjct: 61  SMNEIIDKYN--THSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGL 120

Query: 121 GIEELKKLEKLLEIGLNRVLETKE--------------ALLMKENQRLRNQVRALNRDQQ 180
            I+EL++LEK LE GL+RV+ TK+              + L +EN +LRNQV  ++    
Sbjct: 121 SIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQIS--PA 180

Query: 181 EQQAVG-----VGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 203
           E+Q V        G S  S     +S SS +  + D  D+SLKLGL
Sbjct: 181 EKQVVDTENFVTEGQSSESVMTALHSGSSQSQDNDDGSDVSLKLGL 222

[Close]
BLAST of CmaCh16G002760 vs. ExPASy TrEMBL
Match: A0A6J1J9W9 (MADS-box protein SVP-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482611 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.9e-98
Identity = 202/216 (93.52%), Postives = 202/216 (93.52%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS
Sbjct: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60

Query: 61  SMHELLGRHNKLPEVNNFCQPQYQMEKSVCANLREEFAAKTKELRHMKGEELQELGIEEL 120
           SMHELLGRHNKLPEVNNFCQPQYQMEKSVCANLREEFAAKTKELRHMKGEELQELGIEEL
Sbjct: 61  SMHELLGRHNKLPEVNNFCQPQYQMEKSVCANLREEFAAKTKELRHMKGEELQELGIEEL 120

Query: 121 KKLEKLLEIGLNRVLET--------------KEALLMKENQRLRNQVRALNRDQQEQQAV 180
           KKLEKLLEIGLNRVLET              KEALLMKENQRLRNQVRALNRDQQEQQAV
Sbjct: 121 KKLEKLLEIGLNRVLETKDEKFLKEIDAVKEKEALLMKENQRLRNQVRALNRDQQEQQAV 180

Query: 181 GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 203
           GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL
Sbjct: 181 GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 216

[Close]
BLAST of CmaCh16G002760 vs. ExPASy TrEMBL
Match: A0A6J1J9Z1 (MADS-box protein SVP-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482611 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.7e-96
Identity = 202/217 (93.09%), Postives = 202/217 (93.09%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS
Sbjct: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60

Query: 61  SMHELLGRHNKLPEVNNFCQPQY-QMEKSVCANLREEFAAKTKELRHMKGEELQELGIEE 120
           SMHELLGRHNKLPEVNNFCQPQY QMEKSVCANLREEFAAKTKELRHMKGEELQELGIEE
Sbjct: 61  SMHELLGRHNKLPEVNNFCQPQYQQMEKSVCANLREEFAAKTKELRHMKGEELQELGIEE 120

Query: 121 LKKLEKLLEIGLNRVLET--------------KEALLMKENQRLRNQVRALNRDQQEQQA 180
           LKKLEKLLEIGLNRVLET              KEALLMKENQRLRNQVRALNRDQQEQQA
Sbjct: 121 LKKLEKLLEIGLNRVLETKDEKFLKEIDAVKEKEALLMKENQRLRNQVRALNRDQQEQQA 180

Query: 181 VGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 203
           VGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL
Sbjct: 181 VGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 217

[Close]
BLAST of CmaCh16G002760 vs. ExPASy TrEMBL
Match: A0A6J1E6W1 (MADS-box protein SVP-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430497 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.6e-94
Identity = 195/216 (90.28%), Postives = 200/216 (92.59%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS
Sbjct: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60

Query: 61  SMHELLGRHNKLPEVNNFCQPQYQMEKSVCANLREEFAAKTKELRHMKGEELQELGIEEL 120
           SMHELLGRHNKLPEVNNFCQP +QMEKSVCANLREEFAAKTKELRHMKGEEL+ELGIEEL
Sbjct: 61  SMHELLGRHNKLPEVNNFCQPLFQMEKSVCANLREEFAAKTKELRHMKGEELEELGIEEL 120

Query: 121 KKLEKLLEIGLNRVLET--------------KEALLMKENQRLRNQVRALNRDQQEQQAV 180
           K+LEKLLEIGLNRV+ET              KEALL KENQRLRNQVRALNRD+QEQQAV
Sbjct: 121 KQLEKLLEIGLNRVIETKDEKFLKEIEAVKEKEALLTKENQRLRNQVRALNRDEQEQQAV 180

Query: 181 GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 203
           GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL
Sbjct: 181 GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 216

[Close]
BLAST of CmaCh16G002760 vs. ExPASy TrEMBL
Match: A0A6J1E3I4 (MADS-box protein SVP-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430497 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.9e-93
Identity = 195/217 (89.86%), Postives = 200/217 (92.17%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS
Sbjct: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60

Query: 61  SMHELLGRHNKLPEVNNFCQPQY-QMEKSVCANLREEFAAKTKELRHMKGEELQELGIEE 120
           SMHELLGRHNKLPEVNNFCQP + QMEKSVCANLREEFAAKTKELRHMKGEEL+ELGIEE
Sbjct: 61  SMHELLGRHNKLPEVNNFCQPLFQQMEKSVCANLREEFAAKTKELRHMKGEELEELGIEE 120

Query: 121 LKKLEKLLEIGLNRVLET--------------KEALLMKENQRLRNQVRALNRDQQEQQA 180
           LK+LEKLLEIGLNRV+ET              KEALL KENQRLRNQVRALNRD+QEQQA
Sbjct: 121 LKQLEKLLEIGLNRVIETKDEKFLKEIEAVKEKEALLTKENQRLRNQVRALNRDEQEQQA 180

Query: 181 VGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 203
           VGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL
Sbjct: 181 VGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 217

[Close]
BLAST of CmaCh16G002760 vs. ExPASy TrEMBL
Match: A0A6J1EDZ0 (MADS-box protein SVP-like OS=Cucurbita moschata OX=3662 GN=LOC111432358 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.8e-72
Identity = 165/217 (76.04%), Postives = 179/217 (82.49%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS
Sbjct: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60

Query: 61  SMHELLGRHNKLPEVNNF-CQPQYQMEKSVCANLREEFAAKTKELRHMKGEELQELGIEE 120
           SM ELL RHN +PEVN+F  QP  Q+EK   A L EEFAAKTKEL+HM+GE+LQ+LGIEE
Sbjct: 61  SMQELLRRHNMIPEVNSFGQQPPSQVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLGIEE 120

Query: 121 LKKLEKLLEIGLNRVLET--------------KEALLMKENQRLRNQVRALNRDQQEQQA 180
           LK+LEKLLEIGLNRV+ET              KEALLMKENQRLRN +  LN  +QEQ  
Sbjct: 121 LKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQEQAV 180

Query: 181 VGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 203
             +GGSSLGSKS T+NSSSSPNP+S D DDISLKLGL
Sbjct: 181 --IGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGL 215

[Close]
BLAST of CmaCh16G002760 vs. NCBI nr
Match: XP_022984239.1 (MADS-box protein SVP-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 366.7 bits (940), Expect = 1.4e-97
Identity = 202/216 (93.52%), Postives = 202/216 (93.52%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS
Sbjct: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60

Query: 61  SMHELLGRHNKLPEVNNFCQPQYQMEKSVCANLREEFAAKTKELRHMKGEELQELGIEEL 120
           SMHELLGRHNKLPEVNNFCQPQYQMEKSVCANLREEFAAKTKELRHMKGEELQELGIEEL
Sbjct: 61  SMHELLGRHNKLPEVNNFCQPQYQMEKSVCANLREEFAAKTKELRHMKGEELQELGIEEL 120

Query: 121 KKLEKLLEIGLNRVLET--------------KEALLMKENQRLRNQVRALNRDQQEQQAV 180
           KKLEKLLEIGLNRVLET              KEALLMKENQRLRNQVRALNRDQQEQQAV
Sbjct: 121 KKLEKLLEIGLNRVLETKDEKFLKEIDAVKEKEALLMKENQRLRNQVRALNRDQQEQQAV 180

Query: 181 GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 203
           GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL
Sbjct: 181 GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 216

[Close]
BLAST of CmaCh16G002760 vs. NCBI nr
Match: XP_022984237.1 (MADS-box protein SVP-like isoform X1 [Cucurbita maxima] >XP_022984238.1 MADS-box protein SVP-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 362.1 bits (928), Expect = 3.5e-96
Identity = 202/217 (93.09%), Postives = 202/217 (93.09%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS
Sbjct: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60

Query: 61  SMHELLGRHNKLPEVNNFCQPQY-QMEKSVCANLREEFAAKTKELRHMKGEELQELGIEE 120
           SMHELLGRHNKLPEVNNFCQPQY QMEKSVCANLREEFAAKTKELRHMKGEELQELGIEE
Sbjct: 61  SMHELLGRHNKLPEVNNFCQPQYQQMEKSVCANLREEFAAKTKELRHMKGEELQELGIEE 120

Query: 121 LKKLEKLLEIGLNRVLET--------------KEALLMKENQRLRNQVRALNRDQQEQQA 180
           LKKLEKLLEIGLNRVLET              KEALLMKENQRLRNQVRALNRDQQEQQA
Sbjct: 121 LKKLEKLLEIGLNRVLETKDEKFLKEIDAVKEKEALLMKENQRLRNQVRALNRDQQEQQA 180

Query: 181 VGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 203
           VGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL
Sbjct: 181 VGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 217

[Close]
BLAST of CmaCh16G002760 vs. NCBI nr
Match: XP_022922528.1 (MADS-box protein SVP-like isoform X2 [Cucurbita moschata] >KAG6576879.1 MADS-box protein SVP, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355.5 bits (911), Expect = 3.3e-94
Identity = 195/216 (90.28%), Postives = 200/216 (92.59%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS
Sbjct: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60

Query: 61  SMHELLGRHNKLPEVNNFCQPQYQMEKSVCANLREEFAAKTKELRHMKGEELQELGIEEL 120
           SMHELLGRHNKLPEVNNFCQP +QMEKSVCANLREEFAAKTKELRHMKGEEL+ELGIEEL
Sbjct: 61  SMHELLGRHNKLPEVNNFCQPLFQMEKSVCANLREEFAAKTKELRHMKGEELEELGIEEL 120

Query: 121 KKLEKLLEIGLNRVLET--------------KEALLMKENQRLRNQVRALNRDQQEQQAV 180
           K+LEKLLEIGLNRV+ET              KEALL KENQRLRNQVRALNRD+QEQQAV
Sbjct: 121 KQLEKLLEIGLNRVIETKDEKFLKEIEAVKEKEALLTKENQRLRNQVRALNRDEQEQQAV 180

Query: 181 GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 203
           GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL
Sbjct: 181 GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 216

[Close]
BLAST of CmaCh16G002760 vs. NCBI nr
Match: XP_023552057.1 (MADS-box protein SVP-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353.2 bits (905), Expect = 1.6e-93
Identity = 195/216 (90.28%), Postives = 199/216 (92.13%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS
Sbjct: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60

Query: 61  SMHELLGRHNKLPEVNNFCQPQYQMEKSVCANLREEFAAKTKELRHMKGEELQELGIEEL 120
           SMHELLGRHNKLPEVNNFCQP  QMEKSVCANLREEFAAK KELRHMKGEEL+ELGIEEL
Sbjct: 61  SMHELLGRHNKLPEVNNFCQPLSQMEKSVCANLREEFAAKNKELRHMKGEELEELGIEEL 120

Query: 121 KKLEKLLEIGLNRVLET--------------KEALLMKENQRLRNQVRALNRDQQEQQAV 180
           K+LEKLLEIGLNRVLET              KEALLMKENQRLRN+VRALNRD+QEQQAV
Sbjct: 121 KQLEKLLEIGLNRVLETKDEKFLKEIDAVKEKEALLMKENQRLRNRVRALNRDEQEQQAV 180

Query: 181 GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 203
           GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL
Sbjct: 181 GVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 216

[Close]
BLAST of CmaCh16G002760 vs. NCBI nr
Match: XP_022922526.1 (MADS-box protein SVP-like isoform X1 [Cucurbita moschata] >XP_022922527.1 MADS-box protein SVP-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 350.9 bits (899), Expect = 8.1e-93
Identity = 195/217 (89.86%), Postives = 200/217 (92.17%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS
Sbjct: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60

Query: 61  SMHELLGRHNKLPEVNNFCQPQY-QMEKSVCANLREEFAAKTKELRHMKGEELQELGIEE 120
           SMHELLGRHNKLPEVNNFCQP + QMEKSVCANLREEFAAKTKELRHMKGEEL+ELGIEE
Sbjct: 61  SMHELLGRHNKLPEVNNFCQPLFQQMEKSVCANLREEFAAKTKELRHMKGEELEELGIEE 120

Query: 121 LKKLEKLLEIGLNRVLET--------------KEALLMKENQRLRNQVRALNRDQQEQQA 180
           LK+LEKLLEIGLNRV+ET              KEALL KENQRLRNQVRALNRD+QEQQA
Sbjct: 121 LKQLEKLLEIGLNRVIETKDEKFLKEIEAVKEKEALLTKENQRLRNQVRALNRDEQEQQA 180

Query: 181 VGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 203
           VGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL
Sbjct: 181 VGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 217

[Close]
BLAST of CmaCh16G002760 vs. TAIR 10
Match: AT2G22540.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-38
Identity = 108/236 (45.76%), Postives = 139/236 (58.90%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KIQI+KIDN  ARQVTFSKRRRGLFKKA EL+ LCDAD+ALI+FS++GKLF++ SS
Sbjct: 1   MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60

Query: 61  SMHELLGRHN-KLPEVNNFCQPQYQM---EKSVCANLREEFAAKTKELRHMKGEELQELG 120
           SM E+L RHN +   +    QP  ++   E S  A + +E A K+  LR M+GEELQ L 
Sbjct: 61  SMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 120

Query: 121 IEELKKLEKLLEIGLNRVLETKE--------------ALLMKENQRLRNQVRALNRDQQ- 180
           IEEL++LEK LE GL RV+ETK                 LM EN+RLR Q   L  + + 
Sbjct: 121 IEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQGTQLTEENER 180

Query: 181 ---------------EQQAVGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 203
                          E +   V      S+SIT+  +S+  P   +  D SL+LGL
Sbjct: 181 LGMQICNNVHAHGGAESENAAVYEEGQSSESITNAGNSTGAPVDSESSDTSLRLGL 236

[Close]
BLAST of CmaCh16G002760 vs. TAIR 10
Match: AT4G24540.1 (AGAMOUS-like 24 )

HSP 1 Score: 153.3 bits (386), Expect = 2.3e-37
Identity = 102/221 (46.15%), Postives = 145/221 (65.61%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KI+IKKIDNI ARQVTFSKRRRG+FKKA EL+ LCDAD+ALI+FSA+GKLF++SSS
Sbjct: 1   MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60

Query: 61  SMHELLGRHN-KLPEVNNFCQP---QYQMEKSVCANLREEFAAKTKELRHMKGEELQELG 120
            M ++LGR++     +N    P     ++E    + L +E   KTK+LR ++GE+L  L 
Sbjct: 61  RMRDILGRYSLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLN 120

Query: 121 IEELKKLEKLLEIGLNRV--------------LETKEALLMKENQRLRNQVRALNRDQQE 180
           +EEL++LEKLLE GL+RV              LE + + L+ EN+RLR+++  L     E
Sbjct: 121 LEELQRLEKLLESGLSRVSEKKGECVMSQIFSLEKRGSELVDENKRLRDKLETL-----E 180

Query: 181 QQAVGVGGSSLGSKSITSNSSSSPNPSS-QDCDDISLKLGL 203
           +  +     +L ++S+T+N SS  + +  +D  D SLKLGL
Sbjct: 181 RAKLTTLKEALETESVTTNVSSYDSGTPLEDDSDTSLKLGL 216

[Close]
BLAST of CmaCh16G002760 vs. TAIR 10
Match: AT2G22540.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.7e-35
Identity = 106/236 (44.92%), Postives = 135/236 (57.20%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KIQI+KIDN  ARQVTFSKRRRGLFKKA EL+ LCDAD+ALI+FS++GKLFD    
Sbjct: 1   MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFD---- 60

Query: 61  SMHELLGRHN-KLPEVNNFCQPQYQM---EKSVCANLREEFAAKTKELRHMKGEELQELG 120
            M E+L RHN +   +    QP  ++   E S  A + +E A K+  LR M+GEELQ L 
Sbjct: 61  -MKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 120

Query: 121 IEELKKLEKLLEIGLNRVLETKE--------------ALLMKENQRLRNQVRALNRDQQ- 180
           IEEL++LEK LE GL RV+ETK                 LM EN+RLR Q   L  + + 
Sbjct: 121 IEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQGTQLTEENER 180

Query: 181 ---------------EQQAVGVGGSSLGSKSITSNSSSSPNPSSQDCDDISLKLGL 203
                          E +   V      S+SIT+  +S+  P   +  D SL+LGL
Sbjct: 181 LGMQICNNVHAHGGAESENAAVYEEGQSSESITNAGNSTGAPVDSESSDTSLRLGL 231

[Close]
BLAST of CmaCh16G002760 vs. TAIR 10
Match: AT4G37940.1 (AGAMOUS-like 21 )

HSP 1 Score: 108.2 bits (269), Expect = 8.5e-24
Identity = 81/204 (39.71%), Postives = 117/204 (57.35%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R KI I++ID+  +RQVTFSKRR+GL KKA ELA LCDA++ LI+FS++GKL+D++SS
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SMHELLGRHNKLP-EVNNFCQPQYQME--KSVCANLREEFAAKTKELRHMKGEELQELGI 120
           SM  ++ R+NK   E      P  +++  +   A LR+E  A  +  R M GE+L  L +
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120

Query: 121 EELKKLEKLLEIGLNRVLETKEALLMKENQRL---RNQVRALNRD-QQEQQAVGVGGSSL 180
            EL  LE  +EI L  +   KE LL +E Q L   RN +   N D  ++ Q +      L
Sbjct: 121 NELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVEL 180

Query: 181 GSKSITSNSSSSPNPSSQDCDDIS 198
             K+  +N++   +      DD S
Sbjct: 181 YKKAYMANTNGFTHREVAVADDES 204

[Close]
BLAST of CmaCh16G002760 vs. TAIR 10
Match: AT3G57230.1 (AGAMOUS-like 16 )

HSP 1 Score: 104.8 bits (260), Expect = 9.4e-23
Identity = 68/162 (41.98%), Postives = 100/162 (61.73%), Query Frame = 0 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R KI IK+I+N  +RQVTFSKRR GL KKA ELA LCDA++ +I+FS++G+L+D+SSS
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SMHELLGRHNKLP-EVNNFCQP--QYQMEKSVCANLREEFAAKTKELRHMKGEELQELGI 120
           SM  ++ R++    E ++   P  + Q  +   A L+ +     +  R M GEEL  L +
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120

Query: 121 EELKKLEKLLEIGLNRVLETKEALLMKENQRLRNQVRALNRD 160
           E L+ LE  LE+ L  V        MK++Q L  +++ LNR+
Sbjct: 121 EALQNLENQLELSLRGV-------RMKKDQMLIEEIQVLNRE 155

The following BLAST results are available for this feature:
BLAST of CmaCh16G002760 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FVC12.2e-3745.76MADS-box protein SVP OS=Arabidopsis thaliana OX=3702 GN=SVP PE=1 SV=1[more]
O827943.2e-3646.15MADS-box protein AGL24 OS=Arabidopsis thaliana OX=3702 GN=AGL24 PE=1 SV=1[more]
Q9FUY69.4e-3644.62MADS-box protein JOINTLESS OS=Solanum lycopersicum OX=4081 GN=J PE=1 SV=1[more]
Q5K4R06.1e-3542.67MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
Q9XJ661.3e-3244.25MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
BLAST of CmaCh16G002760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J9W96.9e-9893.52MADS-box protein SVP-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482611... [more]
A0A6J1J9Z11.7e-9693.09MADS-box protein SVP-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482611... [more]
A0A6J1E6W11.6e-9490.28MADS-box protein SVP-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114304... [more]
A0A6J1E3I43.9e-9389.86MADS-box protein SVP-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114304... [more]
A0A6J1EDZ03.8e-7276.04MADS-box protein SVP-like OS=Cucurbita moschata OX=3662 GN=LOC111432358 PE=4 SV=... [more]
BLAST of CmaCh16G002760 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022984239.11.4e-9793.52MADS-box protein SVP-like isoform X2 [Cucurbita maxima][more]
XP_022984237.13.5e-9693.09MADS-box protein SVP-like isoform X1 [Cucurbita maxima] >XP_022984238.1 MADS-box... [more]
XP_022922528.13.3e-9490.28MADS-box protein SVP-like isoform X2 [Cucurbita moschata] >KAG6576879.1 MADS-box... [more]
XP_023552057.11.6e-9390.28MADS-box protein SVP-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022922526.18.1e-9389.86MADS-box protein SVP-like isoform X1 [Cucurbita moschata] >XP_022922527.1 MADS-b... [more]
BLAST of CmaCh16G002760 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G22540.11.6e-3845.76K-box region and MADS-box transcription factor family protein [more]
AT4G24540.12.3e-3746.15AGAMOUS-like 24 [more]
AT2G22540.21.7e-3544.92K-box region and MADS-box transcription factor family protein [more]
AT4G37940.18.5e-2439.71AGAMOUS-like 21 [more]
AT3G57230.19.4e-2341.98AGAMOUS-like 16 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..166
NoneNo IPR availableCOILSCoilCoilcoord: 90..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..193
NoneNo IPR availablePANTHERPTHR48019:SF6MADS-BOX PROTEIN AGL24-LIKE ISOFORM X1coord: 1..200
NoneNo IPR availablePANTHERPTHR48019SERUM RESPONSE FACTOR HOMOLOGcoord: 1..200
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 38..59
score: 56.81
coord: 23..38
score: 67.72
coord: 3..23
score: 57.9
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
e-value: 6.4E-38
score: 142.0
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
e-value: 5.0E-24
score: 83.6
IPR002100Transcription factor, MADS-boxPROSITEPS00350MADS_BOX_1coord: 3..57
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..61
score: 28.679085
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 82..161
e-value: 4.8E-11
score: 42.7
IPR002487Transcription factor, K-boxPROSITEPS51297K_BOXcoord: 83..166
score: 10.757976
IPR036879Transcription factor, MADS-box superfamilyGENE3D3.40.1810.10coord: 15..94
e-value: 5.7E-26
score: 92.4
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILY55455SRF-likecoord: 2..77
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 3..74
e-value: 2.59309E-37
score: 123.431

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G002760.1CmaCh16G002760.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function GO:0003677 DNA binding