CmaCh16G002640 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G002640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	splicing factor 3B subunit 1-like
Location	Cma_Chr16: 1241675 .. 1245454 (-)
RNA-Seq Expression	CmaCh16G002640
Synteny	CmaCh16G002640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTAGAGATTGCCAAAACCCAGGAGGAGAGGAGGAAGTTGGAGCAGCAGTTGGCTTCTCTTAGTTCAGTGACTTTCGATACTGATCTTTATGGTAGTAATGATAAAGCGGGTTATGTGACTTCCATCCCGGTTAATGAGGACGATGAGAACCTTGAAGCCTTGGACAACGAGGTTGCTCGTAAGTTGGCTTCTTATACGGCCCCGAAGTCTCTGTTAAAGGAGATGCCAAGAGGTGGCGAAGAAGATGATGATATAGGGTTTAAGAAACCGCAGAGGATTATCGATAGAGAGGATGATTATAGGAAACGTAGGTTGAATAGGGTGATATCGCCTGAGCGGCATGATGCATTCGCTGCGGGTGAGAAGACTCCGGACCCCTCTGTGAGGACTTATGCGGAGGTGATGAGAGAGGAGGCGTTGAAGAGGGAGAGGGAGGAGACTTTAAGGGCTATAGCTAAGAAGAAGGAAGAAGAGGAGGCCGCTAAGGCATCGGGAGAAAAGCCGAAGGAATCAGCTGCAGTGCCTCAGAAGAGGAGGAATAGGTGGGATCAATCGCAGGATGATGGTGGAGAAAAAAAAGCGAAGACCTCGGATTGGGATTTGCCTGATACAACGCCTGGAAGGTGGGATGCAACACCAGGCCGGGTGGGGGATGCCACTCCTGGTGTGGGGAGAAGGAATAGGTGGGATGAGACTCCAACTCCTGGGAGGTTGGCTGATTTGGATGCAACTCCAGCAGGTGGTGTTACGCCTGGTGCAACCCCTGCTGGAATGACTTGGGATGCAACTCCTAAACTTGCTGGAATGGCTACACCAACTCCAAAAAGGCAGCGATCGCGGTGGGATGAGACCCCGGCAACAATGGGAAGTGCCACTCCTATGCCCGGAGCAACCCCTGCTGCTGCATTTACTCCCGGTGTGACTCCTGTTGGAGGGGTTGAGCTGGCTACCCCAACACCCGGGGCTATCAATTTGCGTGGCCCAATGACGCCTGAGCAGTATAATTTGATGAGGTGGGAGAGAGATATTGAGGAGAGGAATCGCCCATTGACTGATGAAGAACTTGATGCCATGTTTCCACAAGAGGGATATAAGATTCTGGACCCTCCTGCTTCCTATGTGCCAATTCGAACACCTGCAAGGAAGTTGCTCGCTACGCCAACTCCGATGGGAACTCCTCTTTATGCCATTCCAGAGGAGAATCGTGGCCAGCAGTTTGATGTTCCAAAGGAAGCACCTGGTGGCTTGCCATTCATGAAGCCCGAGGATTACCAATACTTTGGGGCATTGTTGAATGAGGAAGATGAGGAGTTGTTGTCTCCAGAAGAGCAGAAAGAGCGGAAGATTATGAAGCTCTTACTCAAGGTTAAGAATGGAACACCTCCTCAAAGGAAAACAGCTTTAAGACAGCTAACTGATAAGGCTCGTGAGTTCGGTGCAGGCCCCTTGTTCAACCGCATTCTGCCACTCCTTATGCAGCCTACTCTGGAGGACCAGGAGAGGCATCTTCTGGTTAAGGTTATTGACAGAGTGCTTTATAAATTGGATGAATTGGTTCGTCCCTATGTGCACAAAATTCTTGTTGTGATTGAGCCATTGTTGATCGATGAAGATTACTATGCACGTGTAGAAGGTAGAGAAATTATATCCAATCTTAGTAAAGCAGCTGGTTTGGCTACTATGATTGCTGCAATGCGTCCAGATATTGACAACATCGATGAATATGTTAGGAATACCACTGCAAGGGCTTTTAGTGTTGTTGCTTCTGCCCTTGGAATTCCTGCCCTTCTTCCATTTTTGAAAGCTGTGTGTCAGAGTAAAAAATCATGGCAAGCACGGCATACTGGAATTAAGATTGTTCAGCAGATTGCTATTCTCATTGGATGTGCTGTTCTACCACATCTTAGGTCTCTTGTAGAAATTATAGAACATGGTCTTAATGATGAGAATCAGAAGGTGAGGACAATTACCGCTTTGTCTCTAGCTGCACTTGCTGAGGCTGCAGCCCCATACGGTATTGAAAGCTTCGACTCAGTCTTGAAGCCACTGTGGAAGGGTATTAGGTCGCACCGTGGTAAGGTGTTGGCTGCTTTCCTGAAGGCTATTGGTTTTATTATTCCTTTGATGGATGCATTGTACGCCTGCTACTATACAAAGGAAGTGATGTACATTCTCATTCGAGAGTTCCAATCGCCCGATGAAGAGATGAAGAAAATTGTTCTCAAAGTGGTCAAGCAGTGTGTGAGCACTGAGGGAGTAGAGGCTGATTATATCCGCAACGATATTCTCCCAGAATTCTTTAGGAACTTTTGGGTTCGTAGAATGGCTTTAGATCGTAGAAATTACAAGCAACTTGTGGACACAACTGTTGAGATAGCAAATAAAGTAGGTGTTGCCGATATCGTTGGTAGAGTTGTTGAAGATCTCAAGGATGAAAGTGAACCTTATAGAAGAATGGTTATGGAAACGATAGAGAAAGTTGTTGCGAACTTGGGTGCATCCGATATCGATGCTCGATTAGAAGAGCTATTGATTGATGGGATTCTTTATGCCTTCCAAGAGCAGACCAGTGATGATGCTAATGTGATGCTTAATGGGTTTGGCGCAGTTGTCAATTCTCTTGGACAGAGAGTAAAACCGTATCTTCCCCAGATTTGTGGTACCATAAAGTGGCGATTGAATAACAAGAGCGCGAAAGTGAGGCAGCAAGCCGCAGATCTTATTTCAAGGATCGCAGTCGTCATGAAGCAGTGCCAAGAGGAACAGCTCATGGGCCATCTTGGTGTTGTCTTGTATGAATATTTGGGAGAAGAATACCCAGAAGTTCTGGGTTCAATTTTGGGAGCCTTAAAGGCTATTGTGAATGTCATTGGTATGACAAAGATGACGCCTCCGATCAAGGATTTGCTTCCCAGATTGACACCAATTTTGAAGAACAGGCATGAGAAAGTGCAAGAGAACTGCATTGACCTTGTCGGTCGTATTGCCGATCGTGGTGCTGAATTTGTTCCAGCAAGAGAATGGATGAGGATCTGCTTTGAGTTGCTTGAGATGCTCAAAGCCCACAAGAAGGGAATCCGTCGTGCTACGGTTAACACATTTGGGTACATTGCTAAAGCCATTGGGCCACAGGATGTTTTGGCGACTTTATTGAACAATCTAAAAGTGCAGGAGAGGCAGAATCGTGTTTGCACTACTGTCGCCATTGCTATAGTTGCAGAAACCTGTTCGCCATTTACCGTTCTGCCTGCCCTAATGAACGAGTATCGTGTGCCAGAGCTTAACGTGCAAAATGGTGTGTTGAAGTCTCTCTCTTTCCTTTTCGAGTATATCGGCGAAATGGGAAAGGATTACATATATGCTGTGACGCCATTGCTCGAGGATGCTCTAATGGACCGAGACCTGGTCCACAGACAAACTGCAGCCTCTGCTGTGAAACATATGGCTCTAGGGGTAGCCGGTTTAGGGTGTGAGGATGCCTTAGTTCACTTGCTAAACTATGTATGGCCGAACATATTCGAAACATCGCCACACGTCATAAACGCCGTGATGGAGGCCGTGGAAGGAATGAGGGTGGCATTGGGCGCAGCGGTTGTGCTCAACTACTGCCTGCAGGGGCTTTTCCACCCTGCTCGGAAAGTTCGAGAAGTATACTGGAAAATCTATAACTCATTGTACATTGGTTCTCAGGATGCTCTTGTTGCAGCTTATCCAGGATTAGAGGATGGAGAAAACAATGTGTATTGCCGGCCGGAACTGGTAATGTTCATCTGA

mRNA sequence

ATGGATTTAGAGATTGCCAAAACCCAGGAGGAGAGGAGGAAGTTGGAGCAGCAGTTGGCTTCTCTTAGTTCAGTGACTTTCGATACTGATCTTTATGGTAGTAATGATAAAGCGGGTTATGTGACTTCCATCCCGGTTAATGAGGACGATGAGAACCTTGAAGCCTTGGACAACGAGGTTGCTCGTAAGTTGGCTTCTTATACGGCCCCGAAGTCTCTGTTAAAGGAGATGCCAAGAGGTGGCGAAGAAGATGATGATATAGGGTTTAAGAAACCGCAGAGGATTATCGATAGAGAGGATGATTATAGGAAACGTAGGTTGAATAGGGTGATATCGCCTGAGCGGCATGATGCATTCGCTGCGGGTGAGAAGACTCCGGACCCCTCTGTGAGGACTTATGCGGAGGTGATGAGAGAGGAGGCGTTGAAGAGGGAGAGGGAGGAGACTTTAAGGGCTATAGCTAAGAAGAAGGAAGAAGAGGAGGCCGCTAAGGCATCGGGAGAAAAGCCGAAGGAATCAGCTGCAGTGCCTCAGAAGAGGAGGAATAGGTGGGATCAATCGCAGGATGATGGTGGAGAAAAAAAAGCGAAGACCTCGGATTGGGATTTGCCTGATACAACGCCTGGAAGGTGGGATGCAACACCAGGCCGGGTGGGGGATGCCACTCCTGGTGTGGGGAGAAGGAATAGGTGGGATGAGACTCCAACTCCTGGGAGGTTGGCTGATTTGGATGCAACTCCAGCAGGTGGTGTTACGCCTGGTGCAACCCCTGCTGGAATGACTTGGGATGCAACTCCTAAACTTGCTGGAATGGCTACACCAACTCCAAAAAGGCAGCGATCGCGGTGGGATGAGACCCCGGCAACAATGGGAAGTGCCACTCCTATGCCCGGAGCAACCCCTGCTGCTGCATTTACTCCCGGTGTGACTCCTGTTGGAGGGGTTGAGCTGGCTACCCCAACACCCGGGGCTATCAATTTGCGTGGCCCAATGACGCCTGAGCAGTATAATTTGATGAGGTGGGAGAGAGATATTGAGGAGAGGAATCGCCCATTGACTGATGAAGAACTTGATGCCATGTTTCCACAAGAGGGATATAAGATTCTGGACCCTCCTGCTTCCTATGTGCCAATTCGAACACCTGCAAGGAAGTTGCTCGCTACGCCAACTCCGATGGGAACTCCTCTTTATGCCATTCCAGAGGAGAATCGTGGCCAGCAGTTTGATGTTCCAAAGGAAGCACCTGGTGGCTTGCCATTCATGAAGCCCGAGGATTACCAATACTTTGGGGCATTGTTGAATGAGGAAGATGAGGAGTTGTTGTCTCCAGAAGAGCAGAAAGAGCGGAAGATTATGAAGCTCTTACTCAAGGTTAAGAATGGAACACCTCCTCAAAGGAAAACAGCTTTAAGACAGCTAACTGATAAGGCTCGTGAGTTCGGTGCAGGCCCCTTGTTCAACCGCATTCTGCCACTCCTTATGCAGCCTACTCTGGAGGACCAGGAGAGGCATCTTCTGGTTAAGGTTATTGACAGAGTGCTTTATAAATTGGATGAATTGGTTCGTCCCTATGTGCACAAAATTCTTGTTGTGATTGAGCCATTGTTGATCGATGAAGATTACTATGCACGTGTAGAAGGTAGAGAAATTATATCCAATCTTAGTAAAGCAGCTGGTTTGGCTACTATGATTGCTGCAATGCGTCCAGATATTGACAACATCGATGAATATGTTAGGAATACCACTGCAAGGGCTTTTAGTGTTGTTGCTTCTGCCCTTGGAATTCCTGCCCTTCTTCCATTTTTGAAAGCTGTGTGTCAGAGTAAAAAATCATGGCAAGCACGGCATACTGGAATTAAGATTGTTCAGCAGATTGCTATTCTCATTGGATGTGCTGTTCTACCACATCTTAGGTCTCTTGTAGAAATTATAGAACATGGTCTTAATGATGAGAATCAGAAGGTGAGGACAATTACCGCTTTGTCTCTAGCTGCACTTGCTGAGGCTGCAGCCCCATACGGTATTGAAAGCTTCGACTCAGTCTTGAAGCCACTGTGGAAGGGTATTAGGTCGCACCGTGGTAAGGTGTTGGCTGCTTTCCTGAAGGCTATTGGTTTTATTATTCCTTTGATGGATGCATTGTACGCCTGCTACTATACAAAGGAAGTGATGTACATTCTCATTCGAGAGTTCCAATCGCCCGATGAAGAGATGAAGAAAATTGTTCTCAAAGTGGTCAAGCAGTGTGTGAGCACTGAGGGAGTAGAGGCTGATTATATCCGCAACGATATTCTCCCAGAATTCTTTAGGAACTTTTGGGTTCGTAGAATGGCTTTAGATCGTAGAAATTACAAGCAACTTGTGGACACAACTGTTGAGATAGCAAATAAAGTAGGTGTTGCCGATATCGTTGGTAGAGTTGTTGAAGATCTCAAGGATGAAAGTGAACCTTATAGAAGAATGGTTATGGAAACGATAGAGAAAGTTGTTGCGAACTTGGGTGCATCCGATATCGATGCTCGATTAGAAGAGCTATTGATTGATGGGATTCTTTATGCCTTCCAAGAGCAGACCAGTGATGATGCTAATGTGATGCTTAATGGGTTTGGCGCAGTTGTCAATTCTCTTGGACAGAGAGTAAAACCGTATCTTCCCCAGATTTGTGGTACCATAAAGTGGCGATTGAATAACAAGAGCGCGAAAGTGAGGCAGCAAGCCGCAGATCTTATTTCAAGGATCGCAGTCGTCATGAAGCAGTGCCAAGAGGAACAGCTCATGGGCCATCTTGGTGTTGTCTTGTATGAATATTTGGGAGAAGAATACCCAGAAGTTCTGGGTTCAATTTTGGGAGCCTTAAAGGCTATTGTGAATGTCATTGGTATGACAAAGATGACGCCTCCGATCAAGGATTTGCTTCCCAGATTGACACCAATTTTGAAGAACAGGCATGAGAAAGTGCAAGAGAACTGCATTGACCTTGTCGGTCGTATTGCCGATCGTGGTGCTGAATTTGTTCCAGCAAGAGAATGGATGAGGATCTGCTTTGAGTTGCTTGAGATGCTCAAAGCCCACAAGAAGGGAATCCGTCGTGCTACGGTTAACACATTTGGGTACATTGCTAAAGCCATTGGGCCACAGGATGTTTTGGCGACTTTATTGAACAATCTAAAAGTGCAGGAGAGGCAGAATCGTGTTTGCACTACTGTCGCCATTGCTATAGTTGCAGAAACCTGTTCGCCATTTACCGTTCTGCCTGCCCTAATGAACGAGTATCGTGTGCCAGAGCTTAACGTGCAAAATGGTGTGTTGAAGTCTCTCTCTTTCCTTTTCGAGTATATCGGCGAAATGGGAAAGGATTACATATATGCTGTGACGCCATTGCTCGAGGATGCTCTAATGGACCGAGACCTGGTCCACAGACAAACTGCAGCCTCTGCTGTGAAACATATGGCTCTAGGGGTAGCCGGTTTAGGGTGTGAGGATGCCTTAGTTCACTTGCTAAACTATGTATGGCCGAACATATTCGAAACATCGCCACACGTCATAAACGCCGTGATGGAGGCCGTGGAAGGAATGAGGGTGGCATTGGGCGCAGCGGTTGTGCTCAACTACTGCCTGCAGGGGCTTTTCCACCCTGCTCGGAAAGTTCGAGAAGTATACTGGAAAATCTATAACTCATTGTACATTGGTTCTCAGGATGCTCTTGTTGCAGCTTATCCAGGATTAGAGGATGGAGAAAACAATGTGTATTGCCGGCCGGAACTGGTAATGTTCATCTGA

Coding sequence (CDS)

ATGGATTTAGAGATTGCCAAAACCCAGGAGGAGAGGAGGAAGTTGGAGCAGCAGTTGGCTTCTCTTAGTTCAGTGACTTTCGATACTGATCTTTATGGTAGTAATGATAAAGCGGGTTATGTGACTTCCATCCCGGTTAATGAGGACGATGAGAACCTTGAAGCCTTGGACAACGAGGTTGCTCGTAAGTTGGCTTCTTATACGGCCCCGAAGTCTCTGTTAAAGGAGATGCCAAGAGGTGGCGAAGAAGATGATGATATAGGGTTTAAGAAACCGCAGAGGATTATCGATAGAGAGGATGATTATAGGAAACGTAGGTTGAATAGGGTGATATCGCCTGAGCGGCATGATGCATTCGCTGCGGGTGAGAAGACTCCGGACCCCTCTGTGAGGACTTATGCGGAGGTGATGAGAGAGGAGGCGTTGAAGAGGGAGAGGGAGGAGACTTTAAGGGCTATAGCTAAGAAGAAGGAAGAAGAGGAGGCCGCTAAGGCATCGGGAGAAAAGCCGAAGGAATCAGCTGCAGTGCCTCAGAAGAGGAGGAATAGGTGGGATCAATCGCAGGATGATGGTGGAGAAAAAAAAGCGAAGACCTCGGATTGGGATTTGCCTGATACAACGCCTGGAAGGTGGGATGCAACACCAGGCCGGGTGGGGGATGCCACTCCTGGTGTGGGGAGAAGGAATAGGTGGGATGAGACTCCAACTCCTGGGAGGTTGGCTGATTTGGATGCAACTCCAGCAGGTGGTGTTACGCCTGGTGCAACCCCTGCTGGAATGACTTGGGATGCAACTCCTAAACTTGCTGGAATGGCTACACCAACTCCAAAAAGGCAGCGATCGCGGTGGGATGAGACCCCGGCAACAATGGGAAGTGCCACTCCTATGCCCGGAGCAACCCCTGCTGCTGCATTTACTCCCGGTGTGACTCCTGTTGGAGGGGTTGAGCTGGCTACCCCAACACCCGGGGCTATCAATTTGCGTGGCCCAATGACGCCTGAGCAGTATAATTTGATGAGGTGGGAGAGAGATATTGAGGAGAGGAATCGCCCATTGACTGATGAAGAACTTGATGCCATGTTTCCACAAGAGGGATATAAGATTCTGGACCCTCCTGCTTCCTATGTGCCAATTCGAACACCTGCAAGGAAGTTGCTCGCTACGCCAACTCCGATGGGAACTCCTCTTTATGCCATTCCAGAGGAGAATCGTGGCCAGCAGTTTGATGTTCCAAAGGAAGCACCTGGTGGCTTGCCATTCATGAAGCCCGAGGATTACCAATACTTTGGGGCATTGTTGAATGAGGAAGATGAGGAGTTGTTGTCTCCAGAAGAGCAGAAAGAGCGGAAGATTATGAAGCTCTTACTCAAGGTTAAGAATGGAACACCTCCTCAAAGGAAAACAGCTTTAAGACAGCTAACTGATAAGGCTCGTGAGTTCGGTGCAGGCCCCTTGTTCAACCGCATTCTGCCACTCCTTATGCAGCCTACTCTGGAGGACCAGGAGAGGCATCTTCTGGTTAAGGTTATTGACAGAGTGCTTTATAAATTGGATGAATTGGTTCGTCCCTATGTGCACAAAATTCTTGTTGTGATTGAGCCATTGTTGATCGATGAAGATTACTATGCACGTGTAGAAGGTAGAGAAATTATATCCAATCTTAGTAAAGCAGCTGGTTTGGCTACTATGATTGCTGCAATGCGTCCAGATATTGACAACATCGATGAATATGTTAGGAATACCACTGCAAGGGCTTTTAGTGTTGTTGCTTCTGCCCTTGGAATTCCTGCCCTTCTTCCATTTTTGAAAGCTGTGTGTCAGAGTAAAAAATCATGGCAAGCACGGCATACTGGAATTAAGATTGTTCAGCAGATTGCTATTCTCATTGGATGTGCTGTTCTACCACATCTTAGGTCTCTTGTAGAAATTATAGAACATGGTCTTAATGATGAGAATCAGAAGGTGAGGACAATTACCGCTTTGTCTCTAGCTGCACTTGCTGAGGCTGCAGCCCCATACGGTATTGAAAGCTTCGACTCAGTCTTGAAGCCACTGTGGAAGGGTATTAGGTCGCACCGTGGTAAGGTGTTGGCTGCTTTCCTGAAGGCTATTGGTTTTATTATTCCTTTGATGGATGCATTGTACGCCTGCTACTATACAAAGGAAGTGATGTACATTCTCATTCGAGAGTTCCAATCGCCCGATGAAGAGATGAAGAAAATTGTTCTCAAAGTGGTCAAGCAGTGTGTGAGCACTGAGGGAGTAGAGGCTGATTATATCCGCAACGATATTCTCCCAGAATTCTTTAGGAACTTTTGGGTTCGTAGAATGGCTTTAGATCGTAGAAATTACAAGCAACTTGTGGACACAACTGTTGAGATAGCAAATAAAGTAGGTGTTGCCGATATCGTTGGTAGAGTTGTTGAAGATCTCAAGGATGAAAGTGAACCTTATAGAAGAATGGTTATGGAAACGATAGAGAAAGTTGTTGCGAACTTGGGTGCATCCGATATCGATGCTCGATTAGAAGAGCTATTGATTGATGGGATTCTTTATGCCTTCCAAGAGCAGACCAGTGATGATGCTAATGTGATGCTTAATGGGTTTGGCGCAGTTGTCAATTCTCTTGGACAGAGAGTAAAACCGTATCTTCCCCAGATTTGTGGTACCATAAAGTGGCGATTGAATAACAAGAGCGCGAAAGTGAGGCAGCAAGCCGCAGATCTTATTTCAAGGATCGCAGTCGTCATGAAGCAGTGCCAAGAGGAACAGCTCATGGGCCATCTTGGTGTTGTCTTGTATGAATATTTGGGAGAAGAATACCCAGAAGTTCTGGGTTCAATTTTGGGAGCCTTAAAGGCTATTGTGAATGTCATTGGTATGACAAAGATGACGCCTCCGATCAAGGATTTGCTTCCCAGATTGACACCAATTTTGAAGAACAGGCATGAGAAAGTGCAAGAGAACTGCATTGACCTTGTCGGTCGTATTGCCGATCGTGGTGCTGAATTTGTTCCAGCAAGAGAATGGATGAGGATCTGCTTTGAGTTGCTTGAGATGCTCAAAGCCCACAAGAAGGGAATCCGTCGTGCTACGGTTAACACATTTGGGTACATTGCTAAAGCCATTGGGCCACAGGATGTTTTGGCGACTTTATTGAACAATCTAAAAGTGCAGGAGAGGCAGAATCGTGTTTGCACTACTGTCGCCATTGCTATAGTTGCAGAAACCTGTTCGCCATTTACCGTTCTGCCTGCCCTAATGAACGAGTATCGTGTGCCAGAGCTTAACGTGCAAAATGGTGTGTTGAAGTCTCTCTCTTTCCTTTTCGAGTATATCGGCGAAATGGGAAAGGATTACATATATGCTGTGACGCCATTGCTCGAGGATGCTCTAATGGACCGAGACCTGGTCCACAGACAAACTGCAGCCTCTGCTGTGAAACATATGGCTCTAGGGGTAGCCGGTTTAGGGTGTGAGGATGCCTTAGTTCACTTGCTAAACTATGTATGGCCGAACATATTCGAAACATCGCCACACGTCATAAACGCCGTGATGGAGGCCGTGGAAGGAATGAGGGTGGCATTGGGCGCAGCGGTTGTGCTCAACTACTGCCTGCAGGGGCTTTTCCACCCTGCTCGGAAAGTTCGAGAAGTATACTGGAAAATCTATAACTCATTGTACATTGGTTCTCAGGATGCTCTTGTTGCAGCTTATCCAGGATTAGAGGATGGAGAAAACAATGTGTATTGCCGGCCGGAACTGGTAATGTTCATCTGA

Protein sequence

MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEVARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFAAGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAVPQKRRNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI

Homology

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BLAST of CmaCh16G002640 vs. ExPASy Swiss-Prot
Match: O57683 (Splicing factor 3B subunit 1 OS=Xenopus laevis OX=8355 GN=sf3b1 PE=2 SV=1)

HSP 1 Score: 1692.2 bits (4381), Expect = 0.0e+00
Identity = 911/1309 (69.60%), Postives = 1047/1309 (79.98%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKLEQQ--LASLSSVTFDTDLYGSNDK--AGYVTSIPVNE-DDENLEA 60
            ++ +I + Q ++  L+++  +   S+  FD ++YG +D    GYVTSI  NE +D++ + 
Sbjct: 11   IEAQIREIQGKKAALDEEEGVGLDSTGYFDQEIYGGSDSRFTGYVTSIAANEQEDDDDDV 70

Query: 61   LDNEVARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPER 120
                  +K   Y AP +LL ++P+  E+ D     +PQ+I +RED+Y+++R   +ISPER
Sbjct: 71   SSATFEQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIANREDEYKQQRRKMIISPER 130

Query: 121  HDAFAAGEKTPDP--SVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKES 180
             D FA G KTPDP  + RT+ +VM+E+ L +E  E  + IA+K +  +    +G     +
Sbjct: 131  LDPFADGGKTPDPKLNARTFKDVMQEQYLTKEEREIRQQIAEKAKSGDLKVVNGSSASSA 190

Query: 181  AAVPQKRRNRWDQSQDD-GGEKKAKTSDWDLPDTTPG------RWDATPGRV-GDATPGV 240
            A  P KR+ RWDQ+ D   G    K S WD  + TPG      RWD TPGR  G+ TPG 
Sbjct: 191  AQPPSKRKRRWDQTGDQTPGSTPKKLSSWDQAEVTPGHTPSSLRWDETPGRAKGNETPGA 250

Query: 241  GRRNR-WDETPTPGRLADLDATPAGGVTPG-ATP--AGMT-------WDATPKL------ 300
               ++ WD  PTP       ATP  G TPG  TP  +G T       WD TPK       
Sbjct: 251  TPGSKIWD--PTPSHTPAGVATPGRGDTPGHVTPGHSGATSSARKNRWDETPKTERDTPG 310

Query: 301  --AGMA--------------TPTP--KRQRSRWDETPAT-MGSATPMPGATPAAAFTPGV 360
              +G A              TPTP   +++SRWDETPA+ MG +TP+         TPG 
Sbjct: 311  HGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPV--------LTPGK 370

Query: 361  TPVG--GVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAMFPQEGYK 420
            TP+G   + +ATPTPG I     MTPEQ    RWER+I+ERNRPL+DEELDAMFP EGYK
Sbjct: 371  TPIGTPAMNMATPTPGHIM---SMTPEQLQAWRWEREIDERNRPLSDEELDAMFP-EGYK 430

Query: 421  ILDPPASYVPIRTPARKLLATPTPM-GTPLYAIPEENRGQQFDVPKEAPGGLPFMKPEDY 480
            +L PPA YVPIRTPARKL ATPTP+ G   + +P E+R  +  V  +  G LPF+KP+D 
Sbjct: 431  VLPPPAGYVPIRTPARKLTATPTPLGGLTGFHMPTEDRSMK-SVSDQPSGNLPFLKPDDI 490

Query: 481  QYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLF 540
            QYF  LL + DE  LSPEEQKERKIMKLLLK+KNGTPP RK ALRQ+TDKAREFGAGPLF
Sbjct: 491  QYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLF 550

Query: 541  NRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVE 600
            N+ILPLLM PTLEDQERHLLVKVIDR+LYKLD+LVRPYVHKILVVIEPLLIDEDYYARVE
Sbjct: 551  NQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVE 610

Query: 601  GREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVC 660
            GREIISNL+KAAGLATMI+ MRPDIDN+DEYVRNTTARAF+VVASALGIP+LLPFLKAVC
Sbjct: 611  GREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVC 670

Query: 661  QSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALSLAAL 720
            +SKKSWQARHTGIKIVQQIAIL+GCA+LPHLRSLVEIIEHGL DE QKVRTI+AL++AAL
Sbjct: 671  KSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAAL 730

Query: 721  AEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYTKEVMYI 780
            AEAA PYGIESFDSVLKPLWKGIR HRGK LAAFLKAIG++IPLMDA YA YYT+EVM I
Sbjct: 731  AEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLI 790

Query: 781  LIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALDRRNYKQ 840
            LIREFQSPDEEMKKIVLKVVKQC  T+GVEA+YI+ +ILP FF++FW  RMALDRRNY+Q
Sbjct: 791  LIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQ 850

Query: 841  LVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELL 900
            LVDTTVE+ANKVG A+I+ R+V+DLKDE+E YR+MVMETIEK++ NLGA+DID +LEE L
Sbjct: 851  LVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQL 910

Query: 901  IDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQA 960
            IDGILYAFQEQT++D +VMLNGFG VVN+LG+RVKPYLPQICGT+ WRLNNKSAKVRQQA
Sbjct: 911  IDGILYAFQEQTTED-SVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQA 970

Query: 961  ADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTP 1020
            ADLISR AVVMK CQEE+LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM KMTP
Sbjct: 971  ADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTP 1030

Query: 1021 PIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKK 1080
            PIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE+V AREWMRICFELLE+LKAHKK
Sbjct: 1031 PIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKK 1090

Query: 1081 GIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPA 1140
             IRRATVNTFGYIAKAIGP DVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPA
Sbjct: 1091 AIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPA 1150

Query: 1141 LMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASA 1200
            LMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA++ 
Sbjct: 1151 LMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAV 1210

Query: 1201 VKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAVVLNYCL 1256
            V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA+G   ++ YCL
Sbjct: 1211 VQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMVQYCL 1270

[Close]

BLAST of CmaCh16G002640 vs. ExPASy Swiss-Prot
Match: O75533 (Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B1 PE=1 SV=3)

HSP 1 Score: 1683.7 bits (4359), Expect = 0.0e+00
Identity = 918/1317 (69.70%), Postives = 1046/1317 (79.42%), Query Frame = 0


Query: 4    EIAKTQE----ERRKLEQQLASL---------SSVTFDTDLYGSNDK--AGYVTSIPVNE 63
            +IAKT E    + R+++ + A+L         S+  +D ++YG +D   AGYVTSI   E
Sbjct: 3    KIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATE 62

Query: 64   ---DDENLEALDNEVARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKR 123
               DD++  +  + + +K   Y AP +LL ++P+  E+ D     +P +I DRED+Y+K 
Sbjct: 63   LEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKH 122

Query: 124  RLNRVISPERHDAFAAGEKTPDP--SVRTYAEVMREEALKREREETLRAIAKKKEEEEAA 183
            R   +ISPER D FA G KTPDP  + RTY +VMRE+ L +E  E  + +A+K +  E  
Sbjct: 123  RRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELK 182

Query: 184  KASGEKPKESAAVPQKRRNRWDQSQDD-GGEKKAKTSDWDLPDT---TPG-RWDATPGRV 243
              +G    +    P KR+ RWDQ+ D   G    K S WD  +T   TP  RWD TPGR 
Sbjct: 183  VVNGAAASQP---PSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRA 242

Query: 244  -GDATPGVGRRNR-WDETPTPGRLADLDATPAGGVTPG-ATP--AGMT-------WDATP 303
             G  TPG    ++ WD  PTP       ATP  G TPG ATP   G T       WD TP
Sbjct: 243  KGSETPGATPGSKIWD--PTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETP 302

Query: 304  KL--------AGMA--------------TPTP--KRQRSRWDETPAT-MGSATPMPGATP 363
            K         +G A              TPTP   +++SRWDETPA+ MG +TP+     
Sbjct: 303  KTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPV----- 362

Query: 364  AAAFTPGVTPVG--GVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDA 423
                TPG TP+G   + +ATPTPG I     MTPEQ    RWER+I+ERNRPL+DEELDA
Sbjct: 363  ---LTPGKTPIGTPAMNMATPTPGHIM---SMTPEQLQAWRWEREIDERNRPLSDEELDA 422

Query: 424  MFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPL-YAIPEENRGQQFDVPKEAPGGL 483
            MFP EGYK+L PPA YVPIRTPARKL ATPTP+G    + +  E+R  +  V  +  G L
Sbjct: 423  MFP-EGYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMK-SVNDQPSGNL 482

Query: 484  PFMKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAR 543
            PF+KP+D QYF  LL + DE  LSPEEQKERKIMKLLLK+KNGTPP RK ALRQ+TDKAR
Sbjct: 483  PFLKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAR 542

Query: 544  EFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLID 603
            EFGAGPLFN+ILPLLM PTLEDQERHLLVKVIDR+LYKLD+LVRPYVHKILVVIEPLLID
Sbjct: 543  EFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLID 602

Query: 604  EDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPAL 663
            EDYYARVEGREIISNL+KAAGLATMI+ MRPDIDN+DEYVRNTTARAF+VVASALGIP+L
Sbjct: 603  EDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSL 662

Query: 664  LPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTI 723
            LPFLKAVC+SKKSWQARHTGIKIVQQIAIL+GCA+LPHLRSLVEIIEHGL DE QKVRTI
Sbjct: 663  LPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTI 722

Query: 724  TALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACY 783
            +AL++AALAEAA PYGIESFDSVLKPLWKGIR HRGK LAAFLKAIG++IPLMDA YA Y
Sbjct: 723  SALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANY 782

Query: 784  YTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMA 843
            YT+EVM ILIREFQSPDEEMKKIVLKVVKQC  T+GVEA+YI+ +ILP FF++FW  RMA
Sbjct: 783  YTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMA 842

Query: 844  LDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDI 903
            LDRRNY+QLVDTTVE+ANKVG A+I+ R+V+DLKDE+E YR+MVMETIEK++ NLGA+DI
Sbjct: 843  LDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADI 902

Query: 904  DARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNK 963
            D +LEE LIDGILYAFQEQT++D +VMLNGFG VVN+LG+RVKPYLPQICGT+ WRLNNK
Sbjct: 903  DHKLEEQLIDGILYAFQEQTTED-SVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNK 962

Query: 964  SAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNV 1023
            SAKVRQQAADLISR AVVMK CQEE+LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNV
Sbjct: 963  SAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNV 1022

Query: 1024 IGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELL 1083
            IGM KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE+V AREWMRICFELL
Sbjct: 1023 IGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELL 1082

Query: 1084 EMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETC 1143
            E+LKAHKK IRRATVNTFGYIAKAIGP DVLATLLNNLKVQERQNRVCTTVAIAIVAETC
Sbjct: 1083 ELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETC 1142

Query: 1144 SPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLV 1203
            SPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLV
Sbjct: 1143 SPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLV 1202

Query: 1204 HRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGA 1256
            HRQTA++ V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA+G 
Sbjct: 1203 HRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGP 1262

[Close]

BLAST of CmaCh16G002640 vs. ExPASy Swiss-Prot
Match: Q99NB9 (Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1)

HSP 1 Score: 1682.5 bits (4356), Expect = 0.0e+00
Identity = 917/1317 (69.63%), Postives = 1046/1317 (79.42%), Query Frame = 0


Query: 4    EIAKTQE----ERRKLEQQLASL---------SSVTFDTDLYGSNDK--AGYVTSIPVNE 63
            +IAKT E    + R+++ + A+L         S+  +D ++YG +D   AGYVTSI   E
Sbjct: 3    KIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATE 62

Query: 64   ---DDENLEALDNEVARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKR 123
               DD++  +  + + +K   Y AP +LL ++P+  E+ D     +P +I DRED+Y+K 
Sbjct: 63   LEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKH 122

Query: 124  RLNRVISPERHDAFAAGEKTPDP--SVRTYAEVMREEALKREREETLRAIAKKKEEEEAA 183
            R   +ISPER D FA G KTPDP  + RTY +VMRE+ L +E  E  + +A+K +  E  
Sbjct: 123  RRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELK 182

Query: 184  KASGEKPKESAAVPQKRRNRWDQSQDD-GGEKKAKTSDWDLPDT---TPG-RWDATPGRV 243
              +G    +    P KR+ RWDQ+ D   G    K S WD  +T   TP  RWD TPGR 
Sbjct: 183  VVNGAAASQP---PSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRA 242

Query: 244  -GDATPGVGRRNR-WDETPTPGRLADLDATPAGGVTPG-ATP--AGMT-------WDATP 303
             G  TPG    ++ WD  PTP       ATP  G TPG ATP   G T       WD TP
Sbjct: 243  KGSETPGATPGSKIWD--PTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETP 302

Query: 304  KL--------AGMA--------------TPTP--KRQRSRWDETPAT-MGSATPMPGATP 363
            K         +G A              TPTP   +++SRWDETPA+ MG +TP+     
Sbjct: 303  KTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPV----- 362

Query: 364  AAAFTPGVTPVG--GVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDA 423
                TPG TP+G   + +ATPTPG I     MTPEQ    RWER+I+ERNRPL+DEELDA
Sbjct: 363  ---LTPGKTPIGTPAMNMATPTPGHIM---SMTPEQLQAWRWEREIDERNRPLSDEELDA 422

Query: 424  MFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPL-YAIPEENRGQQFDVPKEAPGGL 483
            MFP EGYK+L PPA YVPIRTPARKL ATPTP+G    + +  E+R  +  V  +  G L
Sbjct: 423  MFP-EGYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMK-SVNDQPSGNL 482

Query: 484  PFMKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAR 543
            PF+KP+D QYF  LL + DE  LSPEEQKERKIMKLLLK+KNGTPP RK ALRQ+TDKAR
Sbjct: 483  PFLKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAR 542

Query: 544  EFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLID 603
            EFGAGPLFN+ILPLLM PTLEDQERHLLVKVIDR+LYKLD+LVRPYVHKILVVIEPLLID
Sbjct: 543  EFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLID 602

Query: 604  EDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPAL 663
            EDYYARVEGREIISNL+KAAGLATMI+ MRPDIDN+DEYVRNTTARAF+VVASALGIP+L
Sbjct: 603  EDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSL 662

Query: 664  LPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTI 723
            LPFLKAVC+SKKSWQARHTGIKIVQQIAIL+GCA+LPHLRSLVEIIEHGL DE QKVRTI
Sbjct: 663  LPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTI 722

Query: 724  TALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACY 783
            +AL++AALAEAA PYGIESFDSVLKPLWKGIR HRGK LAAFLKAIG++IPLMDA YA Y
Sbjct: 723  SALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANY 782

Query: 784  YTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMA 843
            YT+EVM ILIREFQSPDEEMKKIVLKVVKQC  T+GVEA+YI+ +ILP FF++FW  RMA
Sbjct: 783  YTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMA 842

Query: 844  LDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDI 903
            LDRRNY+QLVDTTVE+ANKVG A+I+ R+V+DLKDE+E YR+MVMETIEK++ NLGA+DI
Sbjct: 843  LDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADI 902

Query: 904  DARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNK 963
            D +LEE LIDGILYAFQEQT++D +VMLNGFG VVN+LG+RVKPYLPQICGT+ WRLNNK
Sbjct: 903  DHKLEEQLIDGILYAFQEQTTED-SVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNK 962

Query: 964  SAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNV 1023
            SAKVRQQAADLISR AVVMK CQEE+LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNV
Sbjct: 963  SAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNV 1022

Query: 1024 IGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELL 1083
            IGM KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE+V AREWMRICFELL
Sbjct: 1023 IGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELL 1082

Query: 1084 EMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETC 1143
            E+LKAHKK IRRATVNTFGYIAKAIGP DVLATLLNNLKVQERQNRVCTTVAIAIVAETC
Sbjct: 1083 ELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETC 1142

Query: 1144 SPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLV 1203
            SPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLV
Sbjct: 1143 SPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLV 1202

Query: 1204 HRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGA 1256
            HRQTA++ V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA+G 
Sbjct: 1203 HRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGP 1262

[Close]

BLAST of CmaCh16G002640 vs. ExPASy Swiss-Prot
Match: Q10178 (U2 snRNP component prp10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp10 PE=1 SV=3)

HSP 1 Score: 1273.1 bits (3293), Expect = 0.0e+00
Identity = 715/1291 (55.38%), Postives = 889/1291 (68.86%), Query Frame = 0


Query: 2    DLEIAKTQEERRKLEQQ--LASLSSVTFDTDLYG----------------SNDKAGYVTS 61
            D+EI + + ER  L +Q   A  SS     ++ G                SN K  Y ++
Sbjct: 23   DVEIERLRAERELLRRQKEAAKNSSTNGSVNIEGTQDSNDLQYNAHLFKSSNPKEEYDSA 82

Query: 62   IPV------NEDDENLEALDNEVARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQR-II 121
            I V      +EDD       N+  R +  Y APK LL E     E  D +  ++ ++ I 
Sbjct: 83   IDVRNDISQDEDDYKRTNDVNDSYRLVRQYEAPKELLNEY--ADESYDPMQERQSKKQIQ 142

Query: 122  DREDDYRKRRLNRVISPERHDAFAAGEKTPD---PSVRTYAEVMREEALKREREETLRAI 181
            DRE DY+K+R +R ++P R DAF      PD    + R+YAEVMR+  L++E       +
Sbjct: 143  DRESDYQKQRYDRQLTPTRVDAF-----QPDGTQSNGRSYAEVMRQVELEKEERRVHMEL 202

Query: 182  AKKKEEEEAAKASGEKPKESAAVPQKRRNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDA 241
             +++ E      + ++ +E  ++  K+R                  + +L +T   +   
Sbjct: 203  NQRRRE-----GTLKEVEEEESISDKKR------------------ELELNNTEISQ--- 262

Query: 242  TPGRVGDATPGVGRRNRWDETPTPGRLADLDATPAGGVTPGATPAGMTWDATPKLAGMAT 301
                         +R+RWD+ P                 P  T    T            
Sbjct: 263  -----------KPKRSRWDQAP-----------------PSVTQVSTT------------ 322

Query: 302  PTPKRQRSRWDETPATMGSATPMPGATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTP 361
                ++RSRWD+ P                 FT     +              +   +  
Sbjct: 323  ----KRRSRWDKAPEN---------------FTISEHVIEN-----------GISEDLIN 382

Query: 362  EQYNLMRWERDIEERNRP----LTDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATP 421
            ++ N+      +EE+ RP    LT+EEL+ + P EGY IL+PP  Y+    P  +LL   
Sbjct: 383  KEVNV------VEEKLRPPVRLLTEEELNELLPSEGYAILEPPPGYLESIHP--ELLQKG 442

Query: 422  TPMGTPLYAIPEENRGQQFDVPKEAPGGLP----------FMKPEDYQYFGALLNEEDEE 481
            T + T  Y +P+E   Q+  + KE P  LP          F K ED +YFG LL  EDE 
Sbjct: 443  TTLDT--YHVPQE---QELPLEKELPAALPTEIPGVGDLAFFKQEDVKYFGKLLKVEDEA 502

Query: 482  LLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLE 541
             L+  E +ERKI++LLLKVKNGTPP RK+ALRQLTD+AR+FGA  LFN+ILPLLM+ TLE
Sbjct: 503  KLTIAELRERKILRLLLKVKNGTPPMRKSALRQLTDQARDFGAAALFNQILPLLMERTLE 562

Query: 542  DQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAG 601
            DQERHLLVKVIDR+LYKLD+LVRP+ HKILVVIEPLLIDEDYYAR EGREIISNL+KA+G
Sbjct: 563  DQERHLLVKVIDRILYKLDDLVRPFTHKILVVIEPLLIDEDYYARAEGREIISNLAKASG 622

Query: 602  LATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGI 661
            LA MIA MRPDID++DEYVRNTTARAFSVVASALG+PALLPFLKAVC+SKKSWQARHTG+
Sbjct: 623  LAHMIATMRPDIDHVDEYVRNTTARAFSVVASALGVPALLPFLKAVCRSKKSWQARHTGV 682

Query: 662  KIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALSLAALAEAAAPYGIESFD 721
            +I+QQIA+L+GC++LPHL++LV+ I HGL DE QKVR +TALSL+ALAEAA PYGIE+FD
Sbjct: 683  RIIQQIALLLGCSILPHLKNLVDCIGHGLEDEQQKVRIMTALSLSALAEAATPYGIEAFD 742

Query: 722  SVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYTKEVMYILIREFQSPDEEMK 781
            SVLKPLW G++ HRGK LAAFLKA GFIIPLM+  YA ++T+ +M IL+REF SPDEEMK
Sbjct: 743  SVLKPLWSGVQRHRGKSLAAFLKATGFIIPLMEPEYASHFTRRIMKILLREFNSPDEEMK 802

Query: 782  KIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALDRRNYKQLVDTTVEIANKVG 841
            KIVLKVV QC ST+GV  +Y+R D+LPEFF  FW RRMA DRR+YKQ+V+TTV +A +VG
Sbjct: 803  KIVLKVVSQCASTDGVTPEYLRTDVLPEFFHCFWSRRMASDRRSYKQVVETTVVLAQQVG 862

Query: 842  VADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTS 901
               IV RVV + KDESEPYR+M  ET++KV+ +LG S+ID RLEELL+DG+L+AFQEQ+ 
Sbjct: 863  SRQIVERVVNNFKDESEPYRKMTAETVDKVIGSLGVSEIDERLEELLLDGVLFAFQEQSV 922

Query: 902  DDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQ 961
            ++  V+L  F  VVN+LG R KPYLPQI  TI +RLNNKSA VR+QAADL+S I +V+K 
Sbjct: 923  EE-KVILTCFSTVVNALGTRCKPYLPQIVSTILYRLNNKSANVREQAADLVSSITIVLKA 982

Query: 962  CQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPIL 1021
            C EE LM  LGVVLYEYLGEEYPEVLGSILGA+KAIV+V+GM+ M PPI+DLLPRLTPIL
Sbjct: 983  CGEEALMRKLGVVLYEYLGEEYPEVLGSILGAIKAIVSVVGMSSMQPPIRDLLPRLTPIL 1042

Query: 1022 KNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYI 1081
            +NRHEKVQEN IDLVG+IADRG+E+V AREWMRICFEL++MLKAHKK IRRA VNTFGYI
Sbjct: 1043 RNRHEKVQENTIDLVGKIADRGSEYVSAREWMRICFELIDMLKAHKKSIRRAAVNTFGYI 1102

Query: 1082 AKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQ 1141
            +KAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETC PFTV+PALM +YR PE+NVQ
Sbjct: 1103 SKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCMPFTVVPALMADYRTPEMNVQ 1162

Query: 1142 NGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGC 1201
            NGVLKSL+F+FEYIGE  +DY+YA+TPLL DALMDRD VHRQTAAS +KH++LG  GLG 
Sbjct: 1163 NGVLKSLAFMFEYIGEQARDYVYAITPLLADALMDRDAVHRQTAASVIKHLSLGCVGLGV 1196

Query: 1202 EDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAVVLNYCLQGLFHPARKVREV 1251
            EDA++HLLN +WPNI E SPHVINAV E ++G+R  +G   ++ Y +QGLFHP+RKVR  
Sbjct: 1223 EDAMIHLLNILWPNILEESPHVINAVREGIDGIRNCIGVGPIMAYLVQGLFHPSRKVRNT 1196

[Close]

BLAST of CmaCh16G002640 vs. ExPASy Swiss-Prot
Match: P49955 (U2 snRNP component HSH155 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HSH155 PE=1 SV=1)

HSP 1 Score: 917.1 bits (2369), Expect = 2.1e-265
Identity = 459/840 (54.64%), Postives = 606/840 (72.14%), Query Frame = 0


Query: 418  LPFMKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 477
            L F KP D++YF  +++++  + L+ +E+KER +  LLLK+KNG    R+T++R LTDKA
Sbjct: 133  LMFFKPSDHKYFADVISKKPIDELNKDEKKERTLSMLLLKIKNGNTASRRTSMRILTDKA 192

Query: 478  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 537
              FG   +FNR+LP+L+  +LEDQERHL++K IDRVLY+L +L +PYVHKILVV  PLLI
Sbjct: 193  VTFGPEMIFNRLLPILLDRSLEDQERHLMIKTIDRVLYQLGDLTKPYVHKILVVAAPLLI 252

Query: 538  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 597
            DED   R  G+EII+NLS  AGL T++  MRPDI+N DEYVRN T+RA +VVA ALG+  
Sbjct: 253  DEDPMVRSTGQEIITNLSTVAGLKTILTVMRPDIENEDEYVRNVTSRAAAVVAKALGVNQ 312

Query: 598  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 657
            LLPF+ A C S+KSW+ARHTGIKIVQQI IL+G  VL HL  L+  I+  L D++  VR 
Sbjct: 313  LLPFINAACHSRKSWKARHTGIKIVQQIGILLGIGVLNHLTGLMSCIKDCLMDDHVPVRI 372

Query: 658  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 717
            +TA +L+ LAE + PYGIE F+ VL+PLWKGIRSHRGKVL++FLKA+G +IPLMD  YA 
Sbjct: 373  VTAHTLSTLAENSYPYGIEVFNVVLEPLWKGIRSHRGKVLSSFLKAVGSMIPLMDPEYAG 432

Query: 718  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 777
            YYT E M I+ REF SPD+EMKK +L V+++C + E +   ++R +I PEFF+ FWVRR+
Sbjct: 433  YYTTEAMRIIRREFDSPDDEMKKTILLVLQKCSAVESITPKFLREEIAPEFFQKFWVRRV 492

Query: 778  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 837
            ALDR   K +  TTV +A K+G +  + +++  L+DE+EP+R M +  + + V  LG +D
Sbjct: 493  ALDRPLNKVVTYTTVTLAKKLGCSYTIDKLLTPLRDEAEPFRTMAVHAVTRTVNLLGTAD 552

Query: 838  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 897
            +D RLE  LID +L AFQEQT+ D +++  GFGAV  SL  R+KP+L  I  TI   L +
Sbjct: 553  LDERLETRLIDALLIAFQEQTNSD-SIIFKGFGAVTVSLDIRMKPFLAPIVSTILNHLKH 612

Query: 898  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 957
            K+  VRQ AADL + +  V+K C E +++  L ++LYE LGE YPEVLGSI+ A+  I +
Sbjct: 613  KTPLVRQHAADLCAILIPVIKNCHEFEMLNKLNIILYESLGEVYPEVLGSIINAMYCITS 672

Query: 958  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1017
            V+ + K+ PPI  +LP LTPIL+N+H KV+ N I  VG I      + P +EWMRICFEL
Sbjct: 673  VMDLDKLQPPINQILPTLTPILRNKHRKVEVNTIKFVGLIGKLAPTYAPPKEWMRICFEL 732

Query: 1018 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1077
            LE+LK+  K IRR+   TFG+IA+AIGP DVL  LLNNLKVQERQ RVCT VAI IVA+ 
Sbjct: 733  LELLKSTNKEIRRSANATFGFIAEAIGPHDVLVALLNNLKVQERQLRVCTAVAIGIVAKV 792

Query: 1078 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1137
            C P+ VLP +MNEY  PE NVQNGVLK++SF+FEYIG M KDYIY +TPLLEDAL DRDL
Sbjct: 793  CGPYNVLPVIMNEYTTPETNVQNGVLKAMSFMFEYIGNMSKDYIYFITPLLEDALTDRDL 852

Query: 1138 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALG 1197
            VHRQTA++ + H+AL  +G G EDA +HL+N + PNIFETSPH I  ++E +E +  ALG
Sbjct: 853  VHRQTASNVITHLALNCSGTGHEDAFIHLMNLLIPNIFETSPHAIMRILEGLEALSQALG 912

Query: 1198 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVM 1257
              + +NY   GLFHPA+ VR+ +W++YN++Y+  QDA+V  YP   D         +LV+
Sbjct: 913  PGLFMNYIWAGLFHPAKNVRKAFWRVYNNMYVMYQDAMVPFYPVTPDNNEEYIEELDLVL 971

[Close]

BLAST of CmaCh16G002640 vs. ExPASy TrEMBL
Match: A0A6J1JA56 (splicing factor 3B subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111483105 PE=3 SV=1)

HSP 1 Score: 2464.9 bits (6387), Expect = 0.0e+00
Identity = 1259/1259 (100.00%), Postives = 1259/1259 (100.00%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV
Sbjct: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAVPQKR 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAVPQKR
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAVPQKR 180

Query: 181  RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL 240
            RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL
Sbjct: 181  RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL 240

Query: 241  ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT 300
            ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT
Sbjct: 241  ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT 300

Query: 301  PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM 360
            PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM
Sbjct: 301  PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM 360

Query: 361  FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF 420
            FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF
Sbjct: 361  FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF 420

Query: 421  MKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF 480
            MKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF
Sbjct: 421  MKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF 480

Query: 481  GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED 540
            GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED
Sbjct: 481  GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED 540

Query: 541  YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP 600
            YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP
Sbjct: 541  YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP 600

Query: 601  FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA 660
            FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA
Sbjct: 601  FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA 660

Query: 661  LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT 720
            LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT
Sbjct: 661  LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT 720

Query: 721  KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD 780
            KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD
Sbjct: 721  KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD 780

Query: 781  RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA 840
            RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA
Sbjct: 781  RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA 840

Query: 841  RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA 900
            RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA
Sbjct: 841  RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA 900

Query: 901  KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 960
            KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG
Sbjct: 901  KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 960

Query: 961  MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM 1020
            MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM
Sbjct: 961  MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM 1020

Query: 1021 LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP 1080
            LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP
Sbjct: 1021 LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP 1080

Query: 1081 FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1140
            FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR
Sbjct: 1081 FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1140

Query: 1141 QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV 1200
            QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV
Sbjct: 1141 QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV 1200

Query: 1201 VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI 1260
            VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI
Sbjct: 1201 VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI 1259

[Close]

BLAST of CmaCh16G002640 vs. ExPASy TrEMBL
Match: A0A6J1E4Z4 (splicing factor 3B subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430650 PE=3 SV=1)

HSP 1 Score: 2460.6 bits (6376), Expect = 0.0e+00
Identity = 1257/1259 (99.84%), Postives = 1257/1259 (99.84%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV
Sbjct: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAVPQKR 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAA PQKR
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAAPQKR 180

Query: 181  RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL 240
            RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL
Sbjct: 181  RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL 240

Query: 241  ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT 300
            ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT
Sbjct: 241  ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT 300

Query: 301  PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM 360
            PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM
Sbjct: 301  PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM 360

Query: 361  FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF 420
            FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF
Sbjct: 361  FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF 420

Query: 421  MKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF 480
            MKPEDYQYFGALLNEEDEE LSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF
Sbjct: 421  MKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF 480

Query: 481  GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED 540
            GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED
Sbjct: 481  GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED 540

Query: 541  YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP 600
            YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP
Sbjct: 541  YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP 600

Query: 601  FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA 660
            FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA
Sbjct: 601  FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA 660

Query: 661  LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT 720
            LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT
Sbjct: 661  LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT 720

Query: 721  KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD 780
            KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD
Sbjct: 721  KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD 780

Query: 781  RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA 840
            RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA
Sbjct: 781  RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA 840

Query: 841  RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA 900
            RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA
Sbjct: 841  RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA 900

Query: 901  KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 960
            KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG
Sbjct: 901  KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 960

Query: 961  MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM 1020
            MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM
Sbjct: 961  MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM 1020

Query: 1021 LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP 1080
            LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP
Sbjct: 1021 LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP 1080

Query: 1081 FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1140
            FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR
Sbjct: 1081 FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1140

Query: 1141 QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV 1200
            QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV
Sbjct: 1141 QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV 1200

Query: 1201 VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI 1260
            VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI
Sbjct: 1201 VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI 1259

[Close]

BLAST of CmaCh16G002640 vs. ExPASy TrEMBL
Match: A0A6J1CHE5 (splicing factor 3B subunit 1 OS=Momordica charantia OX=3673 GN=LOC111011453 PE=3 SV=1)

HSP 1 Score: 2432.9 bits (6304), Expect = 0.0e+00
Identity = 1243/1262 (98.49%), Postives = 1252/1262 (99.21%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEERRK+EQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLE+LDNEV
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLESLDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRG EEDDD+GFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGSEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKES---AAVP 180
            AGEKTPDPSVRTYAEVMREEALKRE+EETLRAIAKKKEEEEAAKASGE+PKES   AA P
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREKEETLRAIAKKKEEEEAAKASGERPKESAAAAAAP 180

Query: 181  QKRRNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQD+GG KKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDEGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKL GMATPTPKRQRSRWDETPATMGSATPMP
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLPGMATPTPKRQRSRWDETPATMGSATPMP 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEE LSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEA+EGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVM 1260
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALV+AYP LEDGENNVY RPELVM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVSAYPALEDGENNVYNRPELVM 1260

[Close]

BLAST of CmaCh16G002640 vs. ExPASy TrEMBL
Match: A0A6J1FMX5 (splicing factor 3B subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446900 PE=3 SV=1)

HSP 1 Score: 2431.4 bits (6300), Expect = 0.0e+00
Identity = 1242/1262 (98.42%), Postives = 1250/1262 (99.05%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEER+K+EQQLASL+SVTFDTDLYG NDKAGYVTSIPVNEDDENLEALDNEV
Sbjct: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRGGEEDDD+GFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKES---AAVP 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKES   AA P
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAAAAAP 180

Query: 181  QKRRNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQDDGG KKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPM 
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMA 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGA+NLRGPMTPEQYNLMRWERDIEERNRPL+DEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEE LSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEA+EGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVM 1260
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG QD LVAAYP LEDG+NNVY RPELVM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260

[Close]

BLAST of CmaCh16G002640 vs. ExPASy TrEMBL
Match: A0A6J1JKN2 (splicing factor 3B subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111487765 PE=3 SV=1)

HSP 1 Score: 2431.0 bits (6299), Expect = 0.0e+00
Identity = 1242/1262 (98.42%), Postives = 1250/1262 (99.05%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEER+K+EQQLASL+SVTFDTDLYG NDKAGYVTSIPVNEDDENLEALDNEV
Sbjct: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRGGEEDDD+GFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKES---AAVP 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKES   AA P
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAAAAAP 180

Query: 181  QKRRNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQDDGG KKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPM 
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMA 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGA+NLRGPMTPEQYNLMRWERDIEERNRPL+DEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEE LSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEGLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEA+EGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVM 1260
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG QD LVAAYP LEDG+NNVY RPELVM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260

[Close]

BLAST of CmaCh16G002640 vs. NCBI nr
Match: XP_022985010.1 (splicing factor 3B subunit 1-like [Cucurbita maxima] >XP_022985011.1 splicing factor 3B subunit 1-like [Cucurbita maxima])

HSP 1 Score: 2464.9 bits (6387), Expect = 0.0e+00
Identity = 1259/1259 (100.00%), Postives = 1259/1259 (100.00%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV
Sbjct: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAVPQKR 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAVPQKR
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAVPQKR 180

Query: 181  RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL 240
            RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL
Sbjct: 181  RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL 240

Query: 241  ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT 300
            ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT
Sbjct: 241  ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT 300

Query: 301  PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM 360
            PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM
Sbjct: 301  PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM 360

Query: 361  FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF 420
            FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF
Sbjct: 361  FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF 420

Query: 421  MKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF 480
            MKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF
Sbjct: 421  MKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF 480

Query: 481  GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED 540
            GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED
Sbjct: 481  GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED 540

Query: 541  YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP 600
            YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP
Sbjct: 541  YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP 600

Query: 601  FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA 660
            FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA
Sbjct: 601  FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA 660

Query: 661  LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT 720
            LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT
Sbjct: 661  LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT 720

Query: 721  KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD 780
            KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD
Sbjct: 721  KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD 780

Query: 781  RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA 840
            RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA
Sbjct: 781  RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA 840

Query: 841  RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA 900
            RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA
Sbjct: 841  RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA 900

Query: 901  KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 960
            KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG
Sbjct: 901  KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 960

Query: 961  MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM 1020
            MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM
Sbjct: 961  MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM 1020

Query: 1021 LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP 1080
            LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP
Sbjct: 1021 LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP 1080

Query: 1081 FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1140
            FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR
Sbjct: 1081 FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1140

Query: 1141 QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV 1200
            QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV
Sbjct: 1141 QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV 1200

Query: 1201 VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI 1260
            VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI
Sbjct: 1201 VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI 1259

[Close]

BLAST of CmaCh16G002640 vs. NCBI nr
Match: XP_023552172.1 (splicing factor 3B subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2461.0 bits (6377), Expect = 0.0e+00
Identity = 1257/1259 (99.84%), Postives = 1257/1259 (99.84%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV
Sbjct: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAVPQKR 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAA PQKR
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAAPQKR 180

Query: 181  RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL 240
            RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL
Sbjct: 181  RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL 240

Query: 241  ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT 300
            ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT
Sbjct: 241  ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT 300

Query: 301  PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM 360
            PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM
Sbjct: 301  PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM 360

Query: 361  FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF 420
            FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF
Sbjct: 361  FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF 420

Query: 421  MKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF 480
            MKPEDYQYFGALLNEEDEE LSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF
Sbjct: 421  MKPEDYQYFGALLNEEDEEQLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF 480

Query: 481  GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED 540
            GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED
Sbjct: 481  GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED 540

Query: 541  YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP 600
            YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP
Sbjct: 541  YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP 600

Query: 601  FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA 660
            FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA
Sbjct: 601  FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA 660

Query: 661  LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT 720
            LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT
Sbjct: 661  LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT 720

Query: 721  KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD 780
            KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD
Sbjct: 721  KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD 780

Query: 781  RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA 840
            RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA
Sbjct: 781  RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA 840

Query: 841  RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA 900
            RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA
Sbjct: 841  RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA 900

Query: 901  KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 960
            KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG
Sbjct: 901  KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 960

Query: 961  MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM 1020
            MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM
Sbjct: 961  MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM 1020

Query: 1021 LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP 1080
            LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP
Sbjct: 1021 LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP 1080

Query: 1081 FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1140
            FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR
Sbjct: 1081 FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1140

Query: 1141 QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV 1200
            QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV
Sbjct: 1141 QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV 1200

Query: 1201 VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI 1260
            VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI
Sbjct: 1201 VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI 1259

[Close]

BLAST of CmaCh16G002640 vs. NCBI nr
Match: XP_022922751.1 (splicing factor 3B subunit 1-like [Cucurbita moschata] >XP_022922752.1 splicing factor 3B subunit 1-like [Cucurbita moschata] >KAG7014872.1 Splicing factor 3B subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 2460.6 bits (6376), Expect = 0.0e+00
Identity = 1257/1259 (99.84%), Postives = 1257/1259 (99.84%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV
Sbjct: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAVPQKR 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAA PQKR
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAAPQKR 180

Query: 181  RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL 240
            RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL
Sbjct: 181  RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL 240

Query: 241  ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT 300
            ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT
Sbjct: 241  ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT 300

Query: 301  PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM 360
            PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM
Sbjct: 301  PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM 360

Query: 361  FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF 420
            FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF
Sbjct: 361  FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF 420

Query: 421  MKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF 480
            MKPEDYQYFGALLNEEDEE LSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF
Sbjct: 421  MKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF 480

Query: 481  GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED 540
            GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED
Sbjct: 481  GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED 540

Query: 541  YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP 600
            YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP
Sbjct: 541  YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP 600

Query: 601  FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA 660
            FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA
Sbjct: 601  FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA 660

Query: 661  LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT 720
            LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT
Sbjct: 661  LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT 720

Query: 721  KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD 780
            KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD
Sbjct: 721  KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD 780

Query: 781  RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA 840
            RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA
Sbjct: 781  RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA 840

Query: 841  RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA 900
            RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA
Sbjct: 841  RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA 900

Query: 901  KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 960
            KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG
Sbjct: 901  KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 960

Query: 961  MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM 1020
            MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM
Sbjct: 961  MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM 1020

Query: 1021 LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP 1080
            LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP
Sbjct: 1021 LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP 1080

Query: 1081 FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1140
            FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR
Sbjct: 1081 FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1140

Query: 1141 QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV 1200
            QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV
Sbjct: 1141 QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV 1200

Query: 1201 VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI 1260
            VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI
Sbjct: 1201 VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI 1259

[Close]

BLAST of CmaCh16G002640 vs. NCBI nr
Match: XP_038877302.1 (splicing factor 3B subunit 1 [Benincasa hispida])

HSP 1 Score: 2437.5 bits (6316), Expect = 0.0e+00
Identity = 1245/1262 (98.65%), Postives = 1253/1262 (99.29%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEERRK+EQQLASL+SVTFDTDLYG NDKAGYVTSIPVNEDDENLE+LDNEV
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESLDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRGG+EDDD+GFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGDEDDDLGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKES---AAVP 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKES   AA P
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVAAAAAP 180

Query: 181  QKRRNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQDDGG KKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEE LSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEA+EGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVM 1260
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG+QDALVA+YP LEDGENNVY RPELVM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELVM 1260

[Close]

BLAST of CmaCh16G002640 vs. NCBI nr
Match: XP_022140896.1 (splicing factor 3B subunit 1 [Momordica charantia] >XP_022140897.1 splicing factor 3B subunit 1 [Momordica charantia])

HSP 1 Score: 2432.9 bits (6304), Expect = 0.0e+00
Identity = 1243/1262 (98.49%), Postives = 1252/1262 (99.21%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEERRK+EQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLE+LDNEV
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLESLDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRG EEDDD+GFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGSEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKES---AAVP 180
            AGEKTPDPSVRTYAEVMREEALKRE+EETLRAIAKKKEEEEAAKASGE+PKES   AA P
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREKEETLRAIAKKKEEEEAAKASGERPKESAAAAAAP 180

Query: 181  QKRRNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQD+GG KKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDEGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKL GMATPTPKRQRSRWDETPATMGSATPMP
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLPGMATPTPKRQRSRWDETPATMGSATPMP 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEE LSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEA+EGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVM 1260
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALV+AYP LEDGENNVY RPELVM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVSAYPALEDGENNVYNRPELVM 1260

[Close]

BLAST of CmaCh16G002640 vs. TAIR 10
Match: AT5G64270.1 (splicing factor, putative )

HSP 1 Score: 2142.5 bits (5550), Expect = 0.0e+00
Identity = 1096/1272 (86.16%), Postives = 1170/1272 (91.98%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSI-PVNEDDENLEALDNE 60
            +D EIAKTQEERRK+E  LASL+S+TFD DLYG ND+A Y TSI P  EDD NL+   + 
Sbjct: 4    LDPEIAKTQEERRKMEADLASLTSLTFDRDLYGGNDRASYSTSIAPNEEDDANLDTTGSL 63

Query: 61   VARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAF 120
            VA++LASYTAP+S+L ++ R   EDDD+GFK  Q I +RE +YR RRLNRV+SP+R DAF
Sbjct: 64   VAQRLASYTAPRSILNDVARPHNEDDDVGFKPRQSIAEREGEYRNRRLNRVLSPDRVDAF 123

Query: 121  AAGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEK------PKES 180
            A G+KTPD SVRTY + MRE AL+RE+EET+R IAKKK+EEE A A  +K      P  S
Sbjct: 124  AMGDKTPDASVRTYTDHMRETALQREKEETMRLIAKKKKEEEEAAAKHQKDSAPPPPASS 183

Query: 181  AAVPQKRRNRWDQSQDDGG---EKKAKTSDWDLPDTTP--GRWDA-TPGRVGDATPGVGR 240
            ++   KRR+RWD  ++DG    + KA +SDWDLPD  P  GRWDA TPGRV DATP  GR
Sbjct: 184  SSSSSKRRHRWDLPEEDGAAAKKAKAASSDWDLPDAAPGIGRWDAPTPGRVSDATPSAGR 243

Query: 241  RNRWDETPTPGRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETP 300
            RNRWDETPTPGR+ D DATP GGVTPGATP+G+TWD      G+ATPTPKRQRSRWDETP
Sbjct: 244  RNRWDETPTPGRVTDSDATPGGGVTPGATPSGVTWD------GLATPTPKRQRSRWDETP 303

Query: 301  ATMGSATPMPGATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEE 360
            ATMGSATPM G TP AA+TPGVTP+GG+++ATPTPG +  RGPMTPEQ N+ RWE+DIEE
Sbjct: 304  ATMGSATPMGGVTPGAAYTPGVTPIGGIDMATPTPGQLIFRGPMTPEQLNMQRWEKDIEE 363

Query: 361  RNRPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQ 420
            RNRPL+DEELDAMFP++GYK+LDPPA+YVPIRTPARKL  TPTPM TP Y IPEENRGQQ
Sbjct: 364  RNRPLSDEELDAMFPKDGYKVLDPPATYVPIRTPARKLQQTPTPMATPGYVIPEENRGQQ 423

Query: 421  FDVPKEAPGGLPFMKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRK 480
            +DVP E PGGLPFMKPEDYQYFG+LLNEE+EE LSPEEQKERKIMKLLLKVKNGTPPQRK
Sbjct: 424  YDVPPEVPGGLPFMKPEDYQYFGSLLNEENEEELSPEEQKERKIMKLLLKVKNGTPPQRK 483

Query: 481  TALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHK 540
            TALRQLTDKARE GAGPLFN+ILPLLMQPTLEDQERHLLVKVIDR+LYKLDE+VRPYVHK
Sbjct: 484  TALRQLTDKARELGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRILYKLDEMVRPYVHK 543

Query: 541  ILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFS 600
            ILVVIEPLLIDEDYYARVEGREIISNLSKAAGLA+MIAAMRPDIDNIDEYVRNTTARAFS
Sbjct: 544  ILVVIEPLLIDEDYYARVEGREIISNLSKAAGLASMIAAMRPDIDNIDEYVRNTTARAFS 603

Query: 601  VVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHG 660
            VVASALGIPALLPFLKAVCQSK+SWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHG
Sbjct: 604  VVASALGIPALLPFLKAVCQSKRSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHG 663

Query: 661  LNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFI 720
            L+DENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFI
Sbjct: 664  LSDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFI 723

Query: 721  IPLMDALYACYYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPE 780
            IPLMDA+YA YYTKEVM ILIREFQSPDEEMKKIVLKVVKQCVSTEGVE +YIR+DILPE
Sbjct: 724  IPLMDAIYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEPEYIRSDILPE 783

Query: 781  FFRNFWVRRMALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIE 840
            FFRNFW R+MAL+RRNYKQLV+TTVE+ANKVGVADIVGRVVEDLKDESE YRRMVMETI+
Sbjct: 784  FFRNFWTRKMALERRNYKQLVETTVEVANKVGVADIVGRVVEDLKDESEQYRRMVMETID 843

Query: 841  KVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQI 900
            KVV NLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVN+LGQRVKPYLPQI
Sbjct: 844  KVVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQI 903

Query: 901  CGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGS 960
            CGTIKWRLNNKSAKVRQQAADLISRIAVVMKQC EEQLMGHLGVVLYEYLGEEYPEVLGS
Sbjct: 904  CGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLGS 963

Query: 961  ILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPA 1020
            ILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPA
Sbjct: 964  ILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPA 1023

Query: 1021 REWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCT 1080
            REWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCT
Sbjct: 1024 REWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCT 1083

Query: 1081 TVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPL 1140
            TVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPL
Sbjct: 1084 TVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPL 1143

Query: 1141 LEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVME 1200
            LEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLN++WPNIFETSPHVINAVME
Sbjct: 1144 LEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNFIWPNIFETSPHVINAVME 1203

Query: 1201 AVEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGEN 1260
            A+EGMRVALGAAV+LNYCLQGLFHPARKVREVYWKIYNSLYIG+QD LVAAYP LED +N
Sbjct: 1204 AIEGMRVALGAAVILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDTLVAAYPVLEDEQN 1263

The following BLAST results are available for this feature:

BLAST of CmaCh16G002640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O57683	0.0e+00	69.60	Splicing factor 3B subunit 1 OS=Xenopus laevis OX=8355 GN=sf3b1 PE=2 SV=1	[more]
O75533	0.0e+00	69.70	Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B1 PE=1 SV=3	[more]
Q99NB9	0.0e+00	69.63	Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1	[more]
Q10178	0.0e+00	55.38	U2 snRNP component prp10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]
P49955	2.1e-265	54.64	U2 snRNP component HSH155 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288...	[more]

BLAST of CmaCh16G002640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JA56	0.0e+00	100.00	splicing factor 3B subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111483105 PE...	[more]
A0A6J1E4Z4	0.0e+00	99.84	splicing factor 3B subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430650 ...	[more]
A0A6J1CHE5	0.0e+00	98.49	splicing factor 3B subunit 1 OS=Momordica charantia OX=3673 GN=LOC111011453 PE=3...	[more]
A0A6J1FMX5	0.0e+00	98.42	splicing factor 3B subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446900 ...	[more]
A0A6J1JKN2	0.0e+00	98.42	splicing factor 3B subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111487765 PE...	[more]

BLAST of CmaCh16G002640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022985010.1	0.0e+00	100.00	splicing factor 3B subunit 1-like [Cucurbita maxima] >XP_022985011.1 splicing fa...	[more]
XP_023552172.1	0.0e+00	99.84	splicing factor 3B subunit 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022922751.1	0.0e+00	99.84	splicing factor 3B subunit 1-like [Cucurbita moschata] >XP_022922752.1 splicing ...	[more]
XP_038877302.1	0.0e+00	98.65	splicing factor 3B subunit 1 [Benincasa hispida]	[more]
XP_022140896.1	0.0e+00	98.49	splicing factor 3B subunit 1 [Momordica charantia] >XP_022140897.1 splicing fact...	[more]

BLAST of CmaCh16G002640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64270.1	0.0e+00	86.16	splicing factor, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 139..159
None	No IPR available	COILS	Coil	Coil	coord: 5..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..250
None	No IPR available	PANTHER	PTHR12097:SF1	BNAA06G23400D PROTEIN	coord: 2..1259
IPR034085	TOG domain	SMART	SM01349	TOG_3	coord: 836..1071 e-value: 0.0032 score: 19.0
IPR015016	Splicing factor 3B subunit 1	PFAM	PF08920	SF3b1	coord: 274..404 e-value: 1.0E-44 score: 152.1
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1080..1244 e-value: 5.9E-6 score: 28.5
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 430..932 e-value: 7.8E-47 score: 162.1
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 933..1079 e-value: 7.7E-8 score: 33.6
IPR038737	Splicing factor 3B subunit 1-like	PANTHER	PTHR12097	SPLICING FACTOR 3B, SUBUNIT 1-RELATED	coord: 2..1259
IPR021133	HEAT, type 2	PROSITE	PS50077	HEAT_REPEAT	coord: 640..678 score: 8.8312
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 454..1248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G002640.1	CmaCh16G002640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000245	spliceosomal complex assembly
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0005689	U12-type spliceosomal complex
cellular_component	GO:0005686	U2 snRNP
cellular_component	GO:0071004	U2-type prespliceosome
molecular_function	GO:0003729	mRNA binding