CmaCh16G002580 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G002580
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	1,8-cineole synthase
Location	Cma_Chr16: 1218431 .. 1218739 (+)
RNA-Seq Expression	CmaCh16G002580
Synteny	CmaCh16G002580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGATTTAGGGTTTTTTCAGGACGATGACGACGAAGGCTGTGGCGGCGGGTCCGTGAATGGACCGGCGGAGTTCCGGTTAGGTCAGATTGTGAGGGCGGTTCGGTTTTTGGGAGAGTCGGCTTATAGCCGGCTCGGTAGGGTAAAGGAGGGGGCAAACCAGACCAGAATCTCGGCGGAGAAATTGGCGGCGGAGGCGCTGTGGTTAGCGGAAAAAATGGCGAGTTGCGGTTGTCGGAGTGAGGCTTGTAGGCGGTGGGCTTCGGCGGGTCAATTGGGAAGACTCTCCCTCGCGGTGGAGCTGTGA

mRNA sequence

ATGCTAGATTTAGGGTTTTTTCAGGACGATGACGACGAAGGCTGTGGCGGCGGGTCCGTGAATGGACCGGCGGAGTTCCGGTTAGGTCAGATTGTGAGGGCGGTTCGGTTTTTGGGAGAGTCGGCTTATAGCCGGCTCGGTAGGGTAAAGGAGGGGGCAAACCAGACCAGAATCTCGGCGGAGAAATTGGCGGCGGAGGCGCTGTGGTTAGCGGAAAAAATGGCGAGTTGCGGTTGTCGGAGTGAGGCTTGTAGGCGGTGGGCTTCGGCGGGTCAATTGGGAAGACTCTCCCTCGCGGTGGAGCTGTGA

Coding sequence (CDS)

ATGCTAGATTTAGGGTTTTTTCAGGACGATGACGACGAAGGCTGTGGCGGCGGGTCCGTGAATGGACCGGCGGAGTTCCGGTTAGGTCAGATTGTGAGGGCGGTTCGGTTTTTGGGAGAGTCGGCTTATAGCCGGCTCGGTAGGGTAAAGGAGGGGGCAAACCAGACCAGAATCTCGGCGGAGAAATTGGCGGCGGAGGCGCTGTGGTTAGCGGAAAAAATGGCGAGTTGCGGTTGTCGGAGTGAGGCTTGTAGGCGGTGGGCTTCGGCGGGTCAATTGGGAAGACTCTCCCTCGCGGTGGAGCTGTGA

Protein sequence

MLDLGFFQDDDDEGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISAEKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVEL

Homology

[Close]

BLAST of CmaCh16G002580 vs. ExPASy TrEMBL
Match: A0A6J1J3Z3 (uncharacterized protein LOC111483193 OS=Cucurbita maxima OX=3661 GN=LOC111483193 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.5e-49
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MLDLGFFQDDDDEGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA 60
           MLDLGFFQDDDDEGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA
Sbjct: 125 MLDLGFFQDDDDEGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA 184

Query: 61  EKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVEL 103
           EKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVEL
Sbjct: 185 EKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVEL 226

[Close]

BLAST of CmaCh16G002580 vs. ExPASy TrEMBL
Match: A0A0A0KXY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G109030 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 8.5e-27
Identity = 68/103 (66.02%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 1   MLDLGFFQDDDD--EGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRI 60
           M++ GF Q+D+D   G GGGSV GP EF LG++VRAVRFLGESA SR GRV+E  NQ+  
Sbjct: 160 MIERGFCQEDNDGENGGGGGSVGGPVEFGLGRVVRAVRFLGESACSRFGRVREVGNQSGS 219

Query: 61  SAEKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVE 102
           S EKLAAE LWLA+KM SCG  +E C RWASA QLGRLSL+ E
Sbjct: 220 SVEKLAAEVLWLAQKMVSCGFGNEVCGRWASATQLGRLSLSAE 262

[Close]

BLAST of CmaCh16G002580 vs. ExPASy TrEMBL
Match: A0A1S3CHW5 (uncharacterized protein LOC103501143 OS=Cucumis melo OX=3656 GN=LOC103501143 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.2e-26
Identity = 67/103 (65.05%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 1   MLDLGFFQDDDD--EGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRI 60
           M++ GF Q+D+D  +G GGGS+ GP EF LG++VRAVR LGESA SR GR KE  NQ+  
Sbjct: 164 MIERGFCQEDNDGGDGGGGGSLGGPVEFGLGRVVRAVRLLGESACSRFGREKEVGNQSGS 223

Query: 61  SAEKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVE 102
           S EKLAAE LWLA+KMASCG  +E C RWASA QLGRLSL+ E
Sbjct: 224 SVEKLAAEMLWLAQKMASCGYWNEVCGRWASAAQLGRLSLSAE 266

[Close]

BLAST of CmaCh16G002580 vs. ExPASy TrEMBL
Match: A0A6J1FQP8 (uncharacterized protein LOC111447583 OS=Cucurbita moschata OX=3662 GN=LOC111447583 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.1e-21
Identity = 63/101 (62.38%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 1   MLDLGFFQDDDDEGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA 60
           ML  GF  DDD++  G  S +GP EF L ++VRAV        SRLG VK+GAN+T  SA
Sbjct: 162 MLHQGFHNDDDEDEDGETS-SGPVEFWLARVVRAV-------CSRLGSVKDGANRTGSSA 221

Query: 61  EKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVE 102
           EKLAAE LWLA KMASCGC  EAC+RWASA QLGRLSL+ E
Sbjct: 222 EKLAAELLWLAGKMASCGCGIEACQRWASAAQLGRLSLSAE 254

[Close]

BLAST of CmaCh16G002580 vs. ExPASy TrEMBL
Match: A0A6J1ISQ7 (uncharacterized protein LOC111478071 OS=Cucurbita maxima OX=3661 GN=LOC111478071 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.2e-20
Identity = 60/95 (63.16%), Postives = 70/95 (73.68%), Query Frame = 0


Query: 7   FQDDDDEGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISAEKLAAE 66
           F++DDDE   G + +GP EF L ++VRAV        SRLG VK+GAN+T  SAEKLAAE
Sbjct: 169 FRNDDDEDEDGETSSGPVEFWLARVVRAV-------CSRLGSVKDGANRTGSSAEKLAAE 228

Query: 67  ALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVE 102
            LWLA KMASCGC  EAC+RWASA QLGRLSL+ E
Sbjct: 229 LLWLAGKMASCGCGIEACQRWASAAQLGRLSLSAE 256

[Close]

BLAST of CmaCh16G002580 vs. NCBI nr
Match: XP_022985112.1 (uncharacterized protein LOC111483193 [Cucurbita maxima])

HSP 1 Score: 203.8 bits (517), Expect = 7.3e-49
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MLDLGFFQDDDDEGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA 60
           MLDLGFFQDDDDEGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA
Sbjct: 125 MLDLGFFQDDDDEGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA 184

Query: 61  EKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVEL 103
           EKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVEL
Sbjct: 185 EKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVEL 226

[Close]

BLAST of CmaCh16G002580 vs. NCBI nr
Match: KAG6576856.1 (putative protein phosphatase 2C 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 96/101 (95.05%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MLDLGFFQDDDDEGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA 60
           MLDLGF QDDDDEG GGGSVNGP EFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA
Sbjct: 389 MLDLGFLQDDDDEGGGGGSVNGPVEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA 448

Query: 61  EKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVE 102
           EKLAAEALWLAEKMASCGCRSEACRRWASA QLGRLSLA E
Sbjct: 449 EKLAAEALWLAEKMASCGCRSEACRRWASADQLGRLSLAAE 489

[Close]

BLAST of CmaCh16G002580 vs. NCBI nr
Match: KAG7014876.1 (hypothetical protein SDJN02_22506, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 96/101 (95.05%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MLDLGFFQDDDDEGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA 60
           MLDLGF QDDDDEG GGGSVNGP EFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA
Sbjct: 154 MLDLGFLQDDDDEGGGGGSVNGPVEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA 213

Query: 61  EKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVE 102
           EKLAAEALWLAEKMASCGCRSEACRRWASA QLGRLSLA E
Sbjct: 214 EKLAAEALWLAEKMASCGCRSEACRRWASADQLGRLSLAAE 254

[Close]

BLAST of CmaCh16G002580 vs. NCBI nr
Match: XP_023551926.1 (uncharacterized protein LOC111809753 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185.7 bits (470), Expect = 2.1e-43
Identity = 95/101 (94.06%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MLDLGFFQDDDDEGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA 60
           MLDLGF QDDD EG GGGSVNGPAEFRLGQIVRAVR LGESAYSRLGRVKE ANQTRISA
Sbjct: 154 MLDLGFLQDDDVEGGGGGSVNGPAEFRLGQIVRAVRLLGESAYSRLGRVKEAANQTRISA 213

Query: 61  EKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVE 102
           EKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLA E
Sbjct: 214 EKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAAE 254

[Close]

BLAST of CmaCh16G002580 vs. NCBI nr
Match: XP_038876704.1 (uncharacterized protein LOC120069090 [Benincasa hispida])

HSP 1 Score: 153.7 bits (387), Expect = 8.7e-34
Identity = 77/101 (76.24%), Postives = 84/101 (83.17%), Query Frame = 0


Query: 1   MLDLGFFQDDDDEGCGGGSVNGPAEFRLGQIVRAVRFLGESAYSRLGRVKEGANQTRISA 60
           M++ GF QDD+D G GGGSV GP EF LGQ+VRAVR LGESA SR GRVKEGANQT  S 
Sbjct: 168 MIERGFCQDDNDGGGGGGSVGGPVEFGLGQVVRAVRLLGESACSRFGRVKEGANQTGSSM 227

Query: 61  EKLAAEALWLAEKMASCGCRSEACRRWASAGQLGRLSLAVE 102
           EKLAAE LWLA+KMASCGCR+E CRRWASA QLGRLSL+ E
Sbjct: 228 EKLAAEVLWLAQKMASCGCRNEVCRRWASAAQLGRLSLSAE 268

[Close]

BLAST of CmaCh16G002580 vs. TAIR 10
Match: AT5G64230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 7.9e-09
Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 20  VNGPAEFRLGQIVRA-VRFLGESAYSRLGRVKEGANQTRISAEKLAAEALWLAEKMASCG 79
           ++ P    L ++VRA VR +G+      G  +E A+QT  ++EKLAAE LWLAEKMA  G
Sbjct: 173 IDEPVRRGLNRVVRAVVRAVGDGFIGWGG--EETADQTAETSEKLAAELLWLAEKMAVYG 232

Query: 80  CRSEACRRWASAGQLGRLSLAVE 102
              EA  +WASA  L  L+L+ E
Sbjct: 233 FVDEAVEKWASASNLAWLALSCE 253

The following BLAST results are available for this feature:

BLAST of CmaCh16G002580 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh16G002580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J3Z3	3.5e-49	100.00	uncharacterized protein LOC111483193 OS=Cucurbita maxima OX=3661 GN=LOC111483193...	[more]
A0A0A0KXY7	8.5e-27	66.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G109030 PE=4 SV=1	[more]
A0A1S3CHW5	4.2e-26	65.05	uncharacterized protein LOC103501143 OS=Cucumis melo OX=3656 GN=LOC103501143 PE=...	[more]
A0A6J1FQP8	9.1e-21	62.38	uncharacterized protein LOC111447583 OS=Cucurbita moschata OX=3662 GN=LOC1114475...	[more]
A0A6J1ISQ7	1.2e-20	63.16	uncharacterized protein LOC111478071 OS=Cucurbita maxima OX=3661 GN=LOC111478071...	[more]

BLAST of CmaCh16G002580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022985112.1	7.3e-49	100.00	uncharacterized protein LOC111483193 [Cucurbita maxima]	[more]
KAG6576856.1	1.4e-44	95.05	putative protein phosphatase 2C 10, partial [Cucurbita argyrosperma subsp. soror...	[more]
KAG7014876.1	1.4e-44	95.05	hypothetical protein SDJN02_22506, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023551926.1	2.1e-43	94.06	uncharacterized protein LOC111809753 [Cucurbita pepo subsp. pepo]	[more]
XP_038876704.1	8.7e-34	76.24	uncharacterized protein LOC120069090 [Benincasa hispida]	[more]

BLAST of CmaCh16G002580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64230.1	7.9e-09	45.78	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31060:SF4	1,8-CINEOLE SYNTHASE	coord: 19..101
IPR038920	BTB/POZ domain-containing protein	PANTHER	PTHR31060	OSJNBA0011J08.25 PROTEIN-RELATED	coord: 19..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G002580.1	CmaCh16G002580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016020	membrane