CmaCh16G001080 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G001080
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	F-box protein At4g22390-like
Location	Cma_Chr16: 489992 .. 490828 (+)
RNA-Seq Expression	CmaCh16G001080
Synteny	CmaCh16G001080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCCAATACAGGCTATAAACTCTCTGTTATTGGATCACATAACGGGTTAGTCTGTATTTCATCTGCAAGTCTGTTGGATGTAGATCCAATTCATATATGGAACCCATCTGTTAGAAAATCTAGGTTGCTTCCCAGTGGCTTGATTCCCAAACGGGACCATTGTTGGCCTCTAAACTACCTTGCATTTGGCTTCAATCAAGCAGTGAATGATCACATAGTGTTGAGAATTGTGAGGATTGAGCAGTGGAGATGCTGTTATCAAGTAGAAATTTACAGTCTCAAATCTGACTGTTGGAGGAGAGTTCCTTCTGTTCCTCCTATTCCCACTGCACTTGACTGCAGATTGTTGCCCAAATCCATCTGCTTCAGTGGACATGTCTATTGGCTTGTGAAGCACAAAAATGGTGGAATTCCCAATTCTGTTCTGTGTTTTGACATGGCCACTGAGGAGTTTCATAGGCTAATGTTGCCTGACTGTTTGGTGTACACAGATACTCCATCACCATTATTATGCTTGGGAGTGATCAAGGAATCTCTATCTGTTTTTCATTGTAGGCCTGATGGTGGGAAGCAACTGTGCGACATATGGGCTTTGAAAATGGGCTCTTGGGTGAGATTAAACACTGTTTTTCTGCCACAACATGGGCAAATAACAAGATCATTGAGCCTCTTTGATCATAAATTTCTCCTTGTAAGGCAGATTGAAGGGCTGGAAAACTATAGACTGGCACTGTTTGATCCTGAACTGGATCGCATTGAGGATATTGGAATTGAATTGGGTTCTCATTGGGTTTATGCAGATTCTTATACGGAGAGTCTTCTTCTACTCTGA

mRNA sequence

ATGAAGGCCAATACAGGCTATAAACTCTCTGTTATTGGATCACATAACGGGTTAGTCTGTATTTCATCTGCAAGTCTGTTGGATGTAGATCCAATTCATATATGGAACCCATCTGTTAGAAAATCTAGGTTGCTTCCCAGTGGCTTGATTCCCAAACGGGACCATTGTTGGCCTCTAAACTACCTTGCATTTGGCTTCAATCAAGCAGTGAATGATCACATAGTGTTGAGAATTGTGAGGATTGAGCAGTGGAGATGCTGTTATCAAGTAGAAATTTACAGTCTCAAATCTGACTGTTGGAGGAGAGTTCCTTCTGTTCCTCCTATTCCCACTGCACTTGACTGCAGATTGTTGCCCAAATCCATCTGCTTCAGTGGACATGTCTATTGGCTTGTGAAGCACAAAAATGGTGGAATTCCCAATTCTGTTCTGTGTTTTGACATGGCCACTGAGGAGTTTCATAGGCTAATGTTGCCTGACTGTTTGGTGTACACAGATACTCCATCACCATTATTATGCTTGGGAGTGATCAAGGAATCTCTATCTGTTTTTCATTGTAGGCCTGATGGTGGGAAGCAACTGTGCGACATATGGGCTTTGAAAATGGGCTCTTGGGTGAGATTAAACACTGTTTTTCTGCCACAACATGGGCAAATAACAAGATCATTGAGCCTCTTTGATCATAAATTTCTCCTTGTAAGGCAGATTGAAGGGCTGGAAAACTATAGACTGGCACTGTTTGATCCTGAACTGGATCGCATTGAGGATATTGGAATTGAATTGGGTTCTCATTGGGTTTATGCAGATTCTTATACGGAGAGTCTTCTTCTACTCTGA

Coding sequence (CDS)

ATGAAGGCCAATACAGGCTATAAACTCTCTGTTATTGGATCACATAACGGGTTAGTCTGTATTTCATCTGCAAGTCTGTTGGATGTAGATCCAATTCATATATGGAACCCATCTGTTAGAAAATCTAGGTTGCTTCCCAGTGGCTTGATTCCCAAACGGGACCATTGTTGGCCTCTAAACTACCTTGCATTTGGCTTCAATCAAGCAGTGAATGATCACATAGTGTTGAGAATTGTGAGGATTGAGCAGTGGAGATGCTGTTATCAAGTAGAAATTTACAGTCTCAAATCTGACTGTTGGAGGAGAGTTCCTTCTGTTCCTCCTATTCCCACTGCACTTGACTGCAGATTGTTGCCCAAATCCATCTGCTTCAGTGGACATGTCTATTGGCTTGTGAAGCACAAAAATGGTGGAATTCCCAATTCTGTTCTGTGTTTTGACATGGCCACTGAGGAGTTTCATAGGCTAATGTTGCCTGACTGTTTGGTGTACACAGATACTCCATCACCATTATTATGCTTGGGAGTGATCAAGGAATCTCTATCTGTTTTTCATTGTAGGCCTGATGGTGGGAAGCAACTGTGCGACATATGGGCTTTGAAAATGGGCTCTTGGGTGAGATTAAACACTGTTTTTCTGCCACAACATGGGCAAATAACAAGATCATTGAGCCTCTTTGATCATAAATTTCTCCTTGTAAGGCAGATTGAAGGGCTGGAAAACTATAGACTGGCACTGTTTGATCCTGAACTGGATCGCATTGAGGATATTGGAATTGAATTGGGTTCTCATTGGGTTTATGCAGATTCTTATACGGAGAGTCTTCTTCTACTCTGA

Protein sequence

MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLNYLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKSICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKESLSVFHCRPDGGKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEGLENYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL

Homology

[Close]

BLAST of CmaCh16G001080 vs. ExPASy Swiss-Prot
Match: Q8GXC7 (F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.6e-11
Identity = 42/154 (27.27%), Postives = 74/154 (48.05%), Query Frame = 0


Query: 9   LSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLNY--LAFGF 68
           + ++GS NGLVCIS         + ++NP+   S+ LP    PK       N+    FGF
Sbjct: 163 VEIVGSSNGLVCISPGE----GAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTYGFGF 222

Query: 69  NQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKSICFSG 128
           +   +D+ ++++V   +        +YSLK+D WRR+ +   +    +       + F+G
Sbjct: 223 DGLTDDYKLVKLVATSE--DILDASVYSLKADSWRRICN---LNYEHNDGSYTSGVHFNG 282

Query: 129 HVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPD 161
            ++W+           V+ FD+ TEEF  + +PD
Sbjct: 283 AIHWVFTESRHN-QRVVVAFDIQTEEFREMPVPD 306

[Close]

BLAST of CmaCh16G001080 vs. ExPASy Swiss-Prot
Match: Q9LP59 (F-box/kelch-repeat protein At1g48625 OS=Arabidopsis thaliana OX=3702 GN=At1g48625 PE=4 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 3.6e-08
Identity = 50/196 (25.51%), Postives = 82/196 (41.84%), Query Frame = 0


Query: 34  IWNPSVRKSRLLPS----GLIPKRDHCWPLNY-LAFGFNQAVNDHIVLRIVRIE-QWRCC 93
           +WNP   ++R + +         RD  +  NY L +    +   H +LR +     +R  
Sbjct: 120 VWNPYWGQTRQIKTRYSHHAFSGRDSTYMFNYSLGYENKNSCRSHKLLRFIDYHWNYRGL 179

Query: 94  YQ---VEIYSLKSDCWRRVPSVPPIPTALDCRLLPKSICFSGHVYWLVKHKNGGIPNSVL 153
           +Q    EIY   SD W  +   P     +        +   G+ YW  + ++GG  + ++
Sbjct: 180 HQFFWYEIYDFDSDLWTTLDVTPHWFIVIS----QSGVSLKGNTYWCARKRSGGYSDHII 239

Query: 154 CFDMATEEFHRLMLPDCLVYTDTPSPLLCLG-VIKESLSV-FHCRPDGGKQLCDIW---- 211
           CFD   E F  L LP    + D     + L  V +E L+V F  +    K + +IW    
Sbjct: 240 CFDFTRERFGPL-LPLPFSFIDRHHSCVILSCVSEEKLAVLFQYKDHYYKNVVEIWITAK 299

[Close]

BLAST of CmaCh16G001080 vs. ExPASy Swiss-Prot
Match: Q9LUI8 (Putative F-box/kelch-repeat protein At3g22730 OS=Arabidopsis thaliana OX=3702 GN=At3g22730 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.9e-08
Identity = 57/175 (32.57%), Postives = 71/175 (40.57%), Query Frame = 0


Query: 32  IHIWNPSVRKSRLLPSGLIPKRDHCWPLN-YLAFGFNQAVNDHIVLRIVRIEQWRC---- 91
           I +WNP + ++R +           WP N Y  F      N +   RI +I   RC    
Sbjct: 117 IVVWNPCLGETRWIR----------WPKNIYSRFALGYEKNKY--GRIYKI--LRCWDRH 176

Query: 92  ------CYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK-SICFSGHVYWLVKHKNGGI 151
                   + EIY   SD WR +  V     ALDC +     + F G+ YWL   K    
Sbjct: 177 NSPTGRVDEFEIYEFSSDSWRVLDLV-----ALDCHIASHIGVSFKGNTYWLASDKKDKY 236

Query: 152 PNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKESLSVFHCRPDGGKQL 195
              +LCFD  TE F RL LP        PS      V K +LSV      GGKQL
Sbjct: 237 -GLLLCFDFTTERFTRLCLP--------PSQ----DVSKMALSVV-----GGKQL 254

[Close]

BLAST of CmaCh16G001080 vs. ExPASy Swiss-Prot
Match: Q9LSV6 (Putative F-box protein At3g25460 OS=Arabidopsis thaliana OX=3702 GN=At3g25460 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.7e-07
Identity = 57/226 (25.22%), Postives = 93/226 (41.15%), Query Frame = 0


Query: 8   KLSVIGSHNGL-------VCISSASLL--DVDPIH----IWNPSVRKSRLLPSGLIPKRD 67
           +L++I  H+ L       +C +S  LL  +V+ I+    +WNP   K++      I  R 
Sbjct: 82  ELNLIDHHSSLGMFRNSPLCQTSGLLLCVNVEKINTRLVVWNPCTGKTK-----WIQHRR 141

Query: 68  HCWPLNYLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALD 127
             +  NY    +    +D+   +I+    +    + EIY + S+ WR       +   +D
Sbjct: 142 MGYICNYALGSYQDKKSDNNSYKILSHGIYG-GQEFEIYEINSNSWR------ILDVTVD 201

Query: 128 CRLLPKSICFSGHVYWLVKHKNG-GIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLC 187
             L  +++   G  YW     N       ++CFD  TE F RL LP  + Y    S    
Sbjct: 202 SSLYIENVSLKGKTYWFATDGNDKPCDLFLICFDYTTERFERLCLPYQIPYFRNTS---- 261

Query: 188 LGVIKESLSVFHCRPDGGKQLCDIWA------LKMGSWVRLNTVFL 214
           L V+KE       +P    +   IW        K+ SW++  TV L
Sbjct: 262 LSVVKEEKLSVLLQPSLTSK-TQIWVTNKIGEAKVLSWIKFLTVDL 290

[Close]

BLAST of CmaCh16G001080 vs. ExPASy Swiss-Prot
Match: Q9ZNQ3 (F-box/LRR-repeat/kelch-repeat protein At2g27520 OS=Arabidopsis thaliana OX=3702 GN=At2g27520 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.8e-05
Identity = 40/131 (30.53%), Postives = 57/131 (43.51%), Query Frame = 0


Query: 62  LAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKS 121
           L +G N     +   +I+RI     C  VEI+ LKS+ WR +  V P       +     
Sbjct: 129 LGYGNNSTKKSYDSYKILRITYG--CKLVEIFELKSNSWRVLSKVHPNVE----KHYYGG 188

Query: 122 ICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKESL 181
           + F G+ YWL   K      ++L FD  TE F  + LP   +Y D    L    V +E L
Sbjct: 189 VSFKGNTYWLSYTK-----FNILSFDFTTETFRSVPLP--FLYQDGFVTLALSVVREEQL 246

Query: 182 SVFHCRPDGGK 193
            +   R D G+
Sbjct: 249 LLLRSRFDMGQ 246

[Close]

BLAST of CmaCh16G001080 vs. ExPASy TrEMBL
Match: A0A6J1JC08 (F-box protein At4g22390-like OS=Cucurbita maxima OX=3661 GN=LOC111483085 PE=4 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.0e-167
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLN 60
           MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLN
Sbjct: 95  MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLN 154

Query: 61  YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 120
           YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK
Sbjct: 155 YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 214

Query: 121 SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKES 180
           SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKES
Sbjct: 215 SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKES 274

Query: 181 LSVFHCRPDGGKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEGLE 240
           LSVFHCRPDGGKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEGLE
Sbjct: 275 LSVFHCRPDGGKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEGLE 334

Query: 241 NYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL 279
           NYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL
Sbjct: 335 NYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL 372

[Close]

BLAST of CmaCh16G001080 vs. ExPASy TrEMBL
Match: A0A6J1E5F4 (F-box/kelch-repeat protein At3g23880-like OS=Cucurbita moschata OX=3662 GN=LOC111430752 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 4.5e-163
Identity = 270/278 (97.12%), Postives = 271/278 (97.48%), Query Frame = 0


Query: 1   MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLN 60
           MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLP GLIPKRDHCWPLN
Sbjct: 95  MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPRGLIPKRDHCWPLN 154

Query: 61  YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 120
           YLAFGFNQA NDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK
Sbjct: 155 YLAFGFNQAANDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 214

Query: 121 SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKES 180
           SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDC VYTDTPSPLLCLGVIKES
Sbjct: 215 SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCFVYTDTPSPLLCLGVIKES 274

Query: 181 LSVFHCRPDGGKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEGLE 240
           LSVFHCRPDGGKQLCDIWA+KMGSWVR NTVFLP HGQITRSLSLFDHKFLLVRQIEGLE
Sbjct: 275 LSVFHCRPDGGKQLCDIWAMKMGSWVRSNTVFLPLHGQITRSLSLFDHKFLLVRQIEGLE 334

Query: 241 NYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL 279
           NY LALFDPE DRIEDIGIELGSHWVYADSYTESLLLL
Sbjct: 335 NYSLALFDPEQDRIEDIGIELGSHWVYADSYTESLLLL 372

[Close]

BLAST of CmaCh16G001080 vs. ExPASy TrEMBL
Match: A0A5D3DHK4 (F-box/kelch-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00830 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 231/280 (82.50%), Postives = 251/280 (89.64%), Query Frame = 0


Query: 1   MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLN 60
           MKAN GYKLSV GS+NGLVCISSASLLDVDPI+IWNPSVRK+RLLPS LIPKRDHCWPLN
Sbjct: 1   MKANLGYKLSVCGSYNGLVCISSASLLDVDPIYIWNPSVRKTRLLPSSLIPKRDHCWPLN 60

Query: 61  YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 120
           +LAFGF+QA NDHIVLRIVRIEQW CCY+VEIYSLK DCWRRV SVP IPTALDCRLL K
Sbjct: 61  FLAFGFHQAKNDHIVLRIVRIEQWSCCYRVEIYSLKDDCWRRVSSVPTIPTALDCRLLSK 120

Query: 121 SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKES 180
           SIC +G VYW+VKH+NGGIPNS+L FD+ATEEFHRLMLPDCLVY DTPSP LCLGV++ES
Sbjct: 121 SICSNGLVYWIVKHRNGGIPNSILSFDIATEEFHRLMLPDCLVYIDTPSP-LCLGVVQES 180

Query: 181 LSVFHCRPDG--GKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEG 240
           LS+FHCRPDG  GKQLCD WALKMGSWVRLNT+ LP HG+IT+  SL D+KFL+VRQIE 
Sbjct: 181 LSIFHCRPDGGNGKQLCDTWALKMGSWVRLNTIVLPLHGRITK--SLLDYKFLIVRQIEE 240

Query: 241 LENYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL 279
           + N RLAL D ELD IEDIGIELGSHWVYADSY ESLLLL
Sbjct: 241 MGNSRLALVDTELDCIEDIGIELGSHWVYADSYKESLLLL 277

[Close]

BLAST of CmaCh16G001080 vs. ExPASy TrEMBL
Match: A0A1S3AZ22 (F-box/kelch-repeat protein At3g23880-like OS=Cucumis melo OX=3656 GN=LOC103484100 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 231/280 (82.50%), Postives = 251/280 (89.64%), Query Frame = 0


Query: 1   MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLN 60
           MKAN GYKLSV GS+NGLVCISSASLLDVDPI+IWNPSVRK+RLLPS LIPKRDHCWPLN
Sbjct: 95  MKANLGYKLSVCGSYNGLVCISSASLLDVDPIYIWNPSVRKTRLLPSSLIPKRDHCWPLN 154

Query: 61  YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 120
           +LAFGF+QA NDHIVLRIVRIEQW CCY+VEIYSLK DCWRRV SVP IPTALDCRLL K
Sbjct: 155 FLAFGFHQAKNDHIVLRIVRIEQWSCCYRVEIYSLKDDCWRRVSSVPTIPTALDCRLLSK 214

Query: 121 SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKES 180
           SIC +G VYW+VKH+NGGIPNS+L FD+ATEEFHRLMLPDCLVY DTPSP LCLGV++ES
Sbjct: 215 SICSNGLVYWIVKHRNGGIPNSILSFDIATEEFHRLMLPDCLVYIDTPSP-LCLGVVQES 274

Query: 181 LSVFHCRPDG--GKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEG 240
           LS+FHCRPDG  GKQLCD WALKMGSWVRLNT+ LP HG+IT+  SL D+KFL+VRQIE 
Sbjct: 275 LSIFHCRPDGGNGKQLCDTWALKMGSWVRLNTIVLPLHGRITK--SLLDYKFLIVRQIEE 334

Query: 241 LENYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL 279
           + N RLAL D ELD IEDIGIELGSHWVYADSY ESLLLL
Sbjct: 335 MGNSRLALVDTELDCIEDIGIELGSHWVYADSYKESLLLL 371

[Close]

BLAST of CmaCh16G001080 vs. ExPASy TrEMBL
Match: A0A0A0L5Z4 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G183340 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 3.3e-134
Identity = 229/280 (81.79%), Postives = 248/280 (88.57%), Query Frame = 0


Query: 1   MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLN 60
           MKAN GYKLSV GS+NGLVCISSASLLDVDPI+IWNPSVRK+RLLPS LIPK DHCWPLN
Sbjct: 95  MKANLGYKLSVCGSYNGLVCISSASLLDVDPIYIWNPSVRKTRLLPSSLIPKWDHCWPLN 154

Query: 61  YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 120
           YLAFGF+QA NDHIVLRIVRIEQW CCYQVEIYSLK+DCWRRV SVP IPTALDCRLL K
Sbjct: 155 YLAFGFHQATNDHIVLRIVRIEQWSCCYQVEIYSLKADCWRRVSSVPTIPTALDCRLLSK 214

Query: 121 SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKES 180
           SIC +G +YW+VKHKNGGIPNS+L FD+ATEEFHRLMLPDCLVY DTP   LCLGV++ES
Sbjct: 215 SICSNGLIYWIVKHKNGGIPNSILSFDIATEEFHRLMLPDCLVYIDTPP--LCLGVVQES 274

Query: 181 LSVFHCRPDG--GKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEG 240
           LS+FHCRPDG  GKQ+CD WALKMGSWVRLN++ LP HG+ITR  SL D+KFL VRQIE 
Sbjct: 275 LSIFHCRPDGGNGKQVCDTWALKMGSWVRLNSIVLPLHGKITRPWSLLDYKFLTVRQIEE 334

Query: 241 LENYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL 279
           + N  LAL D ELDRIEDIGIELGSHWVYADSY ESLLLL
Sbjct: 335 MGNPSLALVDTELDRIEDIGIELGSHWVYADSYKESLLLL 372

[Close]

BLAST of CmaCh16G001080 vs. NCBI nr
Match: XP_022984979.1 (F-box protein At4g22390-like [Cucurbita maxima])

HSP 1 Score: 599.0 bits (1543), Expect = 2.1e-167
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLN 60
           MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLN
Sbjct: 95  MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLN 154

Query: 61  YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 120
           YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK
Sbjct: 155 YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 214

Query: 121 SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKES 180
           SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKES
Sbjct: 215 SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKES 274

Query: 181 LSVFHCRPDGGKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEGLE 240
           LSVFHCRPDGGKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEGLE
Sbjct: 275 LSVFHCRPDGGKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEGLE 334

Query: 241 NYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL 279
           NYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL
Sbjct: 335 NYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL 372

[Close]

BLAST of CmaCh16G001080 vs. NCBI nr
Match: XP_022922916.1 (F-box/kelch-repeat protein At3g23880-like [Cucurbita moschata])

HSP 1 Score: 583.6 bits (1503), Expect = 9.2e-163
Identity = 270/278 (97.12%), Postives = 271/278 (97.48%), Query Frame = 0


Query: 1   MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLN 60
           MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLP GLIPKRDHCWPLN
Sbjct: 95  MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPRGLIPKRDHCWPLN 154

Query: 61  YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 120
           YLAFGFNQA NDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK
Sbjct: 155 YLAFGFNQAANDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 214

Query: 121 SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKES 180
           SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDC VYTDTPSPLLCLGVIKES
Sbjct: 215 SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCFVYTDTPSPLLCLGVIKES 274

Query: 181 LSVFHCRPDGGKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEGLE 240
           LSVFHCRPDGGKQLCDIWA+KMGSWVR NTVFLP HGQITRSLSLFDHKFLLVRQIEGLE
Sbjct: 275 LSVFHCRPDGGKQLCDIWAMKMGSWVRSNTVFLPLHGQITRSLSLFDHKFLLVRQIEGLE 334

Query: 241 NYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL 279
           NY LALFDPE DRIEDIGIELGSHWVYADSYTESLLLL
Sbjct: 335 NYSLALFDPEQDRIEDIGIELGSHWVYADSYTESLLLL 372

[Close]

BLAST of CmaCh16G001080 vs. NCBI nr
Match: XP_023552404.1 (putative F-box/LRR-repeat/kelch-repeat protein At1g11620 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 575.1 bits (1481), Expect = 3.3e-160
Identity = 267/278 (96.04%), Postives = 269/278 (96.76%), Query Frame = 0


Query: 1   MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLN 60
           MKANTGYK SV GSHNGLVC+SSASLLDVDPIHIWNPSVRKSRLLP GLIPKRDHCWPLN
Sbjct: 95  MKANTGYKPSVTGSHNGLVCVSSASLLDVDPIHIWNPSVRKSRLLPRGLIPKRDHCWPLN 154

Query: 61  YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 120
           YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK
Sbjct: 155 YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 214

Query: 121 SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKES 180
           SICFSGHVYWLVKHKNGGIPNS+LCFDMATEEFHRLMLPDCLVYTDTPSPLL LGVIKES
Sbjct: 215 SICFSGHVYWLVKHKNGGIPNSILCFDMATEEFHRLMLPDCLVYTDTPSPLLWLGVIKES 274

Query: 181 LSVFHCRPDGGKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEGLE 240
           LSVFHCRPDGGKQLCDIWALKMGSWVRLNTVFLP HGQ TRSLSLFDHK LLVRQIEGL 
Sbjct: 275 LSVFHCRPDGGKQLCDIWALKMGSWVRLNTVFLPLHGQKTRSLSLFDHKLLLVRQIEGLA 334

Query: 241 NYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL 279
           NY LALFDPELDRIEDIGIELGSHWVYADSYTESLLLL
Sbjct: 335 NYSLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL 372

[Close]

BLAST of CmaCh16G001080 vs. NCBI nr
Match: XP_038892039.1 (F-box/kelch-repeat protein At3g23880-like isoform X1 [Benincasa hispida] >XP_038892048.1 F-box/kelch-repeat protein At3g23880-like isoform X1 [Benincasa hispida])

HSP 1 Score: 518.1 bits (1333), Expect = 4.8e-143
Identity = 240/278 (86.33%), Postives = 254/278 (91.37%), Query Frame = 0


Query: 1   MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLN 60
           MKAN GYKLSV GS+NGLVCISSASLLDVDPI++WNPSVRKSRLLPSGLIPK DHCW LN
Sbjct: 95  MKANIGYKLSVCGSYNGLVCISSASLLDVDPIYVWNPSVRKSRLLPSGLIPKWDHCWSLN 154

Query: 61  YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 120
           YLAFGF+Q VNDHIVLRIVRIEQW CCYQVEIYSLK+DCWRRV SVP IPTALDCRLLPK
Sbjct: 155 YLAFGFHQVVNDHIVLRIVRIEQWSCCYQVEIYSLKADCWRRVSSVPAIPTALDCRLLPK 214

Query: 121 SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKES 180
           SICF+G  YW+VKHKNGGIPNS+L FDMATEEFHRLMLPDCLVYTDTPSP LCLGV+KES
Sbjct: 215 SICFNGFFYWIVKHKNGGIPNSILSFDMATEEFHRLMLPDCLVYTDTPSP-LCLGVVKES 274

Query: 181 LSVFHCRPDGGKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEGLE 240
           LS+FHC PDGGKQLCD WALKMGSWVRLNT+ L  HG+ITR  SL D+KFL+ RQIEGLE
Sbjct: 275 LSIFHCSPDGGKQLCDTWALKMGSWVRLNTIVLTLHGKITRPGSLLDYKFLIARQIEGLE 334

Query: 241 NYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL 279
           NY LAL DPELDRIEDIGIELGSHWVYADSY ESLLLL
Sbjct: 335 NYSLALVDPELDRIEDIGIELGSHWVYADSYKESLLLL 371

[Close]

BLAST of CmaCh16G001080 vs. NCBI nr
Match: KAG7014757.1 (F-box/kelch-repeat protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 509.6 bits (1311), Expect = 1.7e-140
Identity = 242/278 (87.05%), Postives = 243/278 (87.41%), Query Frame = 0


Query: 1   MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLN 60
           MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLP GLIPKRDHCWPLN
Sbjct: 1   MKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPRGLIPKRDHCWPLN 60

Query: 61  YLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 120
           YLAFGFNQA NDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK
Sbjct: 61  YLAFGFNQAANDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK 120

Query: 121 SICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKES 180
           SICFS HVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLL LGVIKES
Sbjct: 121 SICFSEHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLWLGVIKES 180

Query: 181 LSVFHCRPDGGKQLCDIWALKMGSWVRLNTVFLPQHGQITRSLSLFDHKFLLVRQIEGLE 240
           LSVFHCRPDGGKQLCDIWA+KMGSW                              IEGLE
Sbjct: 181 LSVFHCRPDGGKQLCDIWAVKMGSW------------------------------IEGLE 240

Query: 241 NYRLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL 279
           NY LALFDPELDRIEDIGIELGSHWVYADSYTESLLLL
Sbjct: 241 NYSLALFDPELDRIEDIGIELGSHWVYADSYTESLLLL 248

[Close]

BLAST of CmaCh16G001080 vs. TAIR 10
Match: AT3G06240.1 (F-box family protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-12
Identity = 42/154 (27.27%), Postives = 74/154 (48.05%), Query Frame = 0


Query: 9   LSVIGSHNGLVCISSASLLDVDPIHIWNPSVRKSRLLPSGLIPKRDHCWPLNY--LAFGF 68
           + ++GS NGLVCIS         + ++NP+   S+ LP    PK       N+    FGF
Sbjct: 163 VEIVGSSNGLVCISPGE----GAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTYGFGF 222

Query: 69  NQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKSICFSG 128
           +   +D+ ++++V   +        +YSLK+D WRR+ +   +    +       + F+G
Sbjct: 223 DGLTDDYKLVKLVATSE--DILDASVYSLKADSWRRICN---LNYEHNDGSYTSGVHFNG 282

Query: 129 HVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPD 161
            ++W+           V+ FD+ TEEF  + +PD
Sbjct: 283 AIHWVFTESRHN-QRVVVAFDIQTEEFREMPVPD 306

[Close]

BLAST of CmaCh16G001080 vs. TAIR 10
Match: AT3G22730.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 59.3 bits (142), Expect = 5.6e-09
Identity = 57/175 (32.57%), Postives = 71/175 (40.57%), Query Frame = 0


Query: 32  IHIWNPSVRKSRLLPSGLIPKRDHCWPLN-YLAFGFNQAVNDHIVLRIVRIEQWRC---- 91
           I +WNP + ++R +           WP N Y  F      N +   RI +I   RC    
Sbjct: 117 IVVWNPCLGETRWIR----------WPKNIYSRFALGYEKNKY--GRIYKI--LRCWDRH 176

Query: 92  ------CYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK-SICFSGHVYWLVKHKNGGI 151
                   + EIY   SD WR +  V     ALDC +     + F G+ YWL   K    
Sbjct: 177 NSPTGRVDEFEIYEFSSDSWRVLDLV-----ALDCHIASHIGVSFKGNTYWLASDKKDKY 236

Query: 152 PNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKESLSVFHCRPDGGKQL 195
              +LCFD  TE F RL LP        PS      V K +LSV      GGKQL
Sbjct: 237 -GLLLCFDFTTERFTRLCLP--------PSQ----DVSKMALSVV-----GGKQL 254

[Close]

BLAST of CmaCh16G001080 vs. TAIR 10
Match: AT3G25460.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 56.2 bits (134), Expect = 4.8e-08
Identity = 57/226 (25.22%), Postives = 93/226 (41.15%), Query Frame = 0


Query: 8   KLSVIGSHNGL-------VCISSASLL--DVDPIH----IWNPSVRKSRLLPSGLIPKRD 67
           +L++I  H+ L       +C +S  LL  +V+ I+    +WNP   K++      I  R 
Sbjct: 82  ELNLIDHHSSLGMFRNSPLCQTSGLLLCVNVEKINTRLVVWNPCTGKTK-----WIQHRR 141

Query: 68  HCWPLNYLAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALD 127
             +  NY    +    +D+   +I+    +    + EIY + S+ WR       +   +D
Sbjct: 142 MGYICNYALGSYQDKKSDNNSYKILSHGIYG-GQEFEIYEINSNSWR------ILDVTVD 201

Query: 128 CRLLPKSICFSGHVYWLVKHKNG-GIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLC 187
             L  +++   G  YW     N       ++CFD  TE F RL LP  + Y    S    
Sbjct: 202 SSLYIENVSLKGKTYWFATDGNDKPCDLFLICFDYTTERFERLCLPYQIPYFRNTS---- 261

Query: 188 LGVIKESLSVFHCRPDGGKQLCDIWA------LKMGSWVRLNTVFL 214
           L V+KE       +P    +   IW        K+ SW++  TV L
Sbjct: 262 LSVVKEEKLSVLLQPSLTSK-TQIWVTNKIGEAKVLSWIKFLTVDL 290

[Close]

BLAST of CmaCh16G001080 vs. TAIR 10
Match: AT2G27520.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 50.8 bits (120), Expect = 2.0e-06
Identity = 40/131 (30.53%), Postives = 57/131 (43.51%), Query Frame = 0


Query: 62  LAFGFNQAVNDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKS 121
           L +G N     +   +I+RI     C  VEI+ LKS+ WR +  V P       +     
Sbjct: 129 LGYGNNSTKKSYDSYKILRITYG--CKLVEIFELKSNSWRVLSKVHPNVE----KHYYGG 188

Query: 122 ICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDCLVYTDTPSPLLCLGVIKESL 181
           + F G+ YWL   K      ++L FD  TE F  + LP   +Y D    L    V +E L
Sbjct: 189 VSFKGNTYWLSYTK-----FNILSFDFTTETFRSVPLP--FLYQDGFVTLALSVVREEQL 246

Query: 182 SVFHCRPDGGK 193
            +   R D G+
Sbjct: 249 LLLRSRFDMGQ 246

[Close]

BLAST of CmaCh16G001080 vs. TAIR 10
Match: AT3G21130.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.0e-05
Identity = 42/140 (30.00%), Postives = 61/140 (43.57%), Query Frame = 0


Query: 34  IWNPSVRKSRLLPSGLIPKRDHCWPLNYLAFGFNQAVNDHIVLRIVRIEQWRCCYQVE-- 93
           +WNP   ++R      I  R      +  A G++   + H +LR+ R E  R   Q E  
Sbjct: 128 VWNPCSGETR-----WIQPRSSYKVSDIYALGYDNTSSCHKILRMDRSED-RIPIQTEYQ 187

Query: 94  IYSLKSDCW--RRVPSVPPIPTALDCRLLPKSICFSGHVYWLVKHKNG-GIPNSVLCFDM 153
           +Y   S  W    V     IP+    R   + +   G+ YWL   ++G      +LCFD 
Sbjct: 188 VYDFTSKSWLVDGVAGGLFIPSIGTRR---RGLSVKGNTYWLALTEDGPPFDMFLLCFDF 247

Query: 154 ATEEFHRLMLPDCLVYTDTP 169
           +T+ F RL LP     TDTP
Sbjct: 248 STDGFRRLSLP-----TDTP 253

The following BLAST results are available for this feature:

BLAST of CmaCh16G001080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GXC7	2.6e-11	27.27	F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g0624...	[more]
Q9LP59	3.6e-08	25.51	F-box/kelch-repeat protein At1g48625 OS=Arabidopsis thaliana OX=3702 GN=At1g4862...	[more]
Q9LUI8	7.9e-08	32.57	Putative F-box/kelch-repeat protein At3g22730 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LSV6	6.7e-07	25.22	Putative F-box protein At3g25460 OS=Arabidopsis thaliana OX=3702 GN=At3g25460 PE...	[more]
Q9ZNQ3	2.8e-05	30.53	F-box/LRR-repeat/kelch-repeat protein At2g27520 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmaCh16G001080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JC08	1.0e-167	100.00	F-box protein At4g22390-like OS=Cucurbita maxima OX=3661 GN=LOC111483085 PE=4 SV...	[more]
A0A6J1E5F4	4.5e-163	97.12	F-box/kelch-repeat protein At3g23880-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A5D3DHK4	1.1e-134	82.50	F-box/kelch-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3AZ22	1.1e-134	82.50	F-box/kelch-repeat protein At3g23880-like OS=Cucumis melo OX=3656 GN=LOC10348410...	[more]
A0A0A0L5Z4	3.3e-134	81.79	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G183340 PE=4 ...	[more]

BLAST of CmaCh16G001080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022984979.1	2.1e-167	100.00	F-box protein At4g22390-like [Cucurbita maxima]	[more]
XP_022922916.1	9.2e-163	97.12	F-box/kelch-repeat protein At3g23880-like [Cucurbita moschata]	[more]
XP_023552404.1	3.3e-160	96.04	putative F-box/LRR-repeat/kelch-repeat protein At1g11620 [Cucurbita pepo subsp. ...	[more]
XP_038892039.1	4.8e-143	86.33	F-box/kelch-repeat protein At3g23880-like isoform X1 [Benincasa hispida] >XP_038...	[more]
KAG7014757.1	1.7e-140	87.05	F-box/kelch-repeat protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmaCh16G001080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06240.1	1.9e-12	27.27	F-box family protein	[more]
AT3G22730.1	5.6e-09	32.57	F-box and associated interaction domains-containing protein	[more]
AT3G25460.1	4.8e-08	25.22	F-box and associated interaction domains-containing protein	[more]
AT2G27520.1	2.0e-06	30.53	F-box and associated interaction domains-containing protein	[more]
AT3G21130.1	1.0e-05	30.00	F-box and associated interaction domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 29..267 e-value: 1.3E-6 score: 29.7
IPR006527	F-box associated domain, type 1	PFAM	PF07734	FBA_1	coord: 122..219 e-value: 7.4E-7 score: 29.2
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 15..224 e-value: 1.3E-24 score: 84.8
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 9..278
None	No IPR available	PANTHER	PTHR47993:SF31	AND ASSOCIATED INTERACTION DOMAINS-CONTAINING PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 9..278
IPR011043	Galactose oxidase/kelch, beta-propeller	SUPERFAMILY	50965	Galactose oxidase, central domain	coord: 9..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G001080.1	CmaCh16G001080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding