CmaCh16G000880 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G000880
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Reticulon-like protein
Location	Cma_Chr16: 386386 .. 392192 (-)
RNA-Seq Expression	CmaCh16G000880
Synteny	CmaCh16G000880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTCTGCTTTGGAGACGATTCTTTCTCCCATTTTCATTTTTTGTTCTTCAATTTGGCCTAAAGGATCCATGGCTGACCAACCAGGCGGGCTGGATTCGGTTACTGACAAGATCTCCGGTAAGATCGACGGCTACAATTCTTCCTCTTCCTCCGGCTCTGATGATGACCAGCCTTCAAAAATCAATGCTGTAAAATCCCACGTTTTTAGGCTCTTCGGTAGAGATAAGCCCGTTCACACGGTCTTGGGCGGTGGAAAACGTACTCTCTGATCCTTCTCTCTATCTCTGTCTTTATCGTGATTGATCGGTTAATGGAAGATTTTATGGATATATAAGTATTGGATCATGCTCTGTTTGTCATTCTTACCTATCAAATTCCTTTCTGTCTTTCTACATTGTTATAATCGAGATGTGCTTGCGCGAGTTCTTGCCATTTTTCGTTCGATTGGATGACTGTCCAATGTTTTTTGCCCTATTTTTTGAAGGAAGCAATTCCATTGATTGAATGAAATGGTACTAAGAGAAAAATAAATCCAAAGGGATCGCATAAAGGATGACTGATTTCTATAAATTTTCATATGCATTTTCTAAAAGGCGAGTCGCTTTTTACATCAGAGATTGAGTGATTGTCCAATGTTAAAACGGAGAGTATTCTCTTTTTCTTTCAATCGAGTTATGGATGAAAACCTTAGGTTATTAGCGTTATGGCTTCATAATCTGTGCCAATGAGTATTGACATAGGCTCTTGACCAAGAGGTAGGAGGTTCGAATTTGTGACCTTGAGATTGGTGTGCTAAGAAAACAAATTTCTGTTGTTTTACCCCTCACCGGTTTGCTGTCTTTATCCGTGAGGGACCTTTTCTTATAAGTTATGGTTAATTCCGGTTGCAGCTGCTGATGTTCTTCTTTGGAGGAACAAGAAGAACTCTGCAGGCATCCTTGGGGGTGCCACCGCCTTGTGGATTCTTTTTGAGCTGCTTGAGTACCAATTAATCACTCTCCTATGCCATATATTAATTCTTGTACTGGCTCTAGTTTTCACGCGGTCTTATGCCAGTTCGTTTATCAACAAGTAAGGACTTCGACTTGCAAAATCTAATGCAATAAATAGCCTGTTTCACCCCCTTTTTATATATATATTTTTTGTGTTCTTTGTATAGGTCCCCACCACAAATCCCAGATTTTAGACTTCCTGAAGATCGTCTACTCGAGGTTGTCTCTGCATTGAGAATCGAAATCAACCATGTAATCTCCAATTTACGTAACATTGCTTCTGGGAGAGATTTGAAGAAATTCCTCCGTGTACGTTCACTGTTACTATCTCATGAGTAAAGGAAATATTTCTAGACTCGATCATCTATAGGAAACATCGCTTTTCATCAATTGGTTCATTTATTAATCTGGTAATGCTGCTGAGGATGTTTTATACCATTAATAGGCTTTTATTGGCTTATGGGTTCTATCAATGGTTGGAAGCTGGTGCAATTTTCTGACCTTGTTATACACATGTAAGGACTACTCTTTCAATTTTCACTGAGAAATTACCAAATCGCCTGCATTTAGGTGCTTACATAATGATATATTGATGTGCTTATTGATGCTTGAAAAACAGCCGTTGTATTGCTACACACTGTGCCAGTGCTATATGAGAAGTATGATGACCAGGTTGACGCATTTGCTGAGAAGGCTTTGATAGAGGTCAAGAAGCAGTATGCTGTATTTAACGCCGAAGTTCTGAGTAAAATCCCGATGGGGGCACTTCAAGAGAAGAAGAAGGATTAGGTTATGTGGCATTTTTGTCTGGTTAGGCTTACCTTCATATCTCTCCGTTATTGCTCAATGCTCAGTTTCAAATTAAATTCATAAACCACAACATTATGAGCCAGTCCAATCTTCTGATGTGGTCTGGTACTAGAGTTCTTAAAAAAAAAAAAAAAAAATCAATAAATGTTCGAGACCACGATCGAAAGAGAGATCCTTAGAATATGCTAGTATTGCTAAGAAATATTATTTGTACTAACAAGATACCTTCCTTTTCGGTGACTAAATTATAGGAATCTTGAAGTTAAGCGAACTTGGAGCAATTTTGCATTAGGTGACCTTTTGAAAATTTGGCTGAAATCTTTAACTTCCATCATCTAGTTTTGCAACATATGAAGTGGTAAGTGGGAAGAAGTGAATTTTCACTTCGTGATCGAACCATTAGTGAATTGAAAGAAATCACAAGAAAACAAATTATTATCAAACGGTGCCTTAAAAATTAGAATGGACTCTTCCCTTTTTTCGCACTAAGAATTATGTTTAGTTTGATTTCCCTACCATCAAGTTGAGAGAAGGAAAAGAAAAACAGCAAGAGAACTCTTGGGATCAGTTTCTGAGGATTGGAAAATTCAAAATTTCTATTCTGCATTAGCTTACTCAGCATAATGTCTCAAATGAACATTTTGTTTATAATGGATTCAAAATCTGAACATGGCGCCATTCACAAAAGTGGCATCCACCAGTTCCTTGTGATGTAAAACAGATCCAAGGTTGCTATCACACGGCATTCAAGGTTTGATTAATTTATCTACACCTGAAAAGTTCAGCAGCATCATTGCTGCAGTAGTGCAATGAAGCTTCCTAGGATTTTTCGAAAATCCTCAGACATAACTCATGGAGACTGGCTTTAGCACAGACCAGTTTCTTCTAACTTTCCTAGAACTCATTCCCTACAAAGGATTTGCATACAGTAACGTTCATGCCATGAACTTCAACTTGATGTAGAGCTCAATTATTTGACATTCATGCCGGGAAAAATCCGAGCTTGCTTTAGCTTTGTGAACAGAAAGATCTTGAATTGGATTAAATTTTTCTTTCCTTGGGGTAAGGGATTTGCATTGATACCTAAAGGTGTTCAATGCTATGCCAATAGGATGGGTTTTAACCTTTAGTTATCATTGTCTCATAAATCCTCCATAGCTTAAGGACGCTATCAAGGGAACCCCACAACTTAACTGGCAAAAATATGCATATTTATGGCTTAGCTAGTCTGTCTTGTTAGCAACTATAGTGACTGAAGGATGACTCGCAACGACAGGTTGCATGTGGGAAGTCTCGGTCCCCACAGAAAATGTCAATACAGAAACAATACAAGAACAAAACTTATAAAGGCCATCCATCACTGTGCTTCCATGGTCGAAAAGCAGAAAATCCAACAAGGCTGGCAAAAACTAGTAGAAAGAGACAGAGAGGTAATTCTATCATACTTTGTCCATGTCTCCTCCTTCCTGCTGTAGACATGTGACAAACTTCTCATTCTTAGGCAACACTTTTAGTCCATTAGCTAAAAGTCAATCACTGTTTAAGAAAAAAGCAGGATTGGATCTGTTTAAATACCAAATTGTTGGTCAGGTCTCTCGTTTTCTTTGAACGGTCTTTTGGGAAACACTGGGAGAGGTGGGAACCATTTATTAGTCTACTCGGGTTTTTTTTTTCTTTTTTCTTTTTTCTTTTCTCGGAGACTAAGAGTATTGAAGAGTCCAAGTTCACCGATAGTAGATATTGTTCTCTTTGGGTTTTCCCTCAAGGTTTTAAAACGTGTCTACTAGGGAGAGGTTTCTACACCCTTATAAAGAATGTTTCGTTCTCCTCCCCAACTGATGTGAGATTTCACAATCCATCCCTCTTCAGGGCCAGCATCCTAATTGGCACTTGTTCCCTCTCCAATCATCGTGGGATCCCCCAATCCATCCCCCCCCGCCTCTTCGGTGCCAGCGTCTTTGCTGGCACATTGCATCGTGTCCACTCCCCTTTGGGGCTTAGCTCATTGTTGGCACATCGTCCGGTGTCTGGTTCTAATACCATTTGTAACAGTCGAAATCCACCGCTAGTAGATATTGCCCTCTTTGGGCTTCCCCTCAAGGTTTTAAAATGTGTCTACTAGGAAGAGGTTTCCACACCCTTATAAAGAATGTTTCATTCTCCTCCCCAACGGATGTGGGATTTCACAATCCACCTCTCTTTGGGGCCTAGCGTCCTCGCTGGCACGTTCTCTTCTTCAATCGATGTGAGATCCCCAAATCCACCCCCCTTCGGGGCCCAACGTCTTTCATGTCCACTCCCCTTTGGGACTCAGCCTTCTCGCTGGCACATCATCCGGTGTCTGGCTCTAATACCATTTGTAAAAATTCAAATCCACAACTAGAAGATATTGCTCTCCTTGGACTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTAAAATGTGTCTGCTAGGGAAAGGTTTCTACACCCTTATAAAGAATGTTTCTTTCTCCTCCCCAACGAGATTTCACAATCCACCCCTCTTCGGGGCCTAGTGTCCTCGCTGGCACTCGTTCCTTCTCCAATCAAGGTGGGATCCCCCAATCCACCGAGCATCTTTGCTAGTACACCGCCTCGTGTCCACTCCCCTTCGAGGCTCAGTCTTCTCATTGGCACATCGTCCAGTGATTGGCTCTAATATCATTTGTAACGGTCCAAATCCACCGTTAGTAGATATTTCCCTCTTTGGCTTTCCCTTATGGGCTTCCCCTCAAAGTTTTAAAACACGTCTGGTAGGGAGAGATTTCCACACCTGTATAAAGAATGTTTCTTTCTCCTCTCCAACCGATGTGAGATTTCACCTAGTATTCCATGGCTACTCATTTTTGCTTTCTAGGCACAATTATCCTCTGGTGTTTAAGAGCTTATCTGCATGGAGTAGGCACTTCTGAAGTTTCCAAATACGAAGACAATAATGGTGCATTAACAAGGTGAAAAGGACTAGGCAAATCTTGTTGGTATTCAGAAAAAGATAAGGTTTCTAACAACAGACTGTTTGAGGATATGGCTGAAATGGTTGCCCATCCTGAACGAGTTTTCAGCCTTTTCGGGTTTGGTAATGGATTTAAAGTATTCAAATGACCTACCAAAAGCCTTAAATATTCAAGAATGTTCATGAATGACTGTTTATAATATGAAGCACACAAAAACTGAAAGCTACAATTTTGCAGCAGACACATGAGCATAAATGGAGCCCATGTTCATCATTATGCCCAGAGATGAAACTGAAAGTTTGGTCTGAGGATGCTTCAGTGGCTTGCGATGTGACTAAAATTCATGCATCTCAAATAGTTCCATTGAATCTTATTAGCTTTGTGCGAGAAAAGTTAAAAGAGTTACCACTTTTCTGAATCGTTTGCCTGCCACCAAAAAGCTAACTTCAAGTGCTAAAGTATGCATACGTCCGGTCGAAGATACATTGGTTTCCCTCGATCCAAGCGCCCTTCTAGTCTTAAAGTTTCCGTGGTTGAGAGAGGATGTGAGCCAGAAACTGTATAACCAAAAAGATGGGGTTTTGGCTCTTTTAGGCAAAGAGAGTGGGTATTGTTCAAAAACACTTCTTTCAGACTAAAATTTCAACTGTGGTTTGCAAGATGAAGTAGCACAAACGTGTGTTAGGAATCACGATTCTCCACAATAGTATGATATTGTCCATTTTGAGCATAATCTCTCATGTCTTTGCTTTGGGCTTCCAAAAGGTCTCATGTCAATGGAGATAGTATTCCTCACTTATAAACCCATGATCATCCCCTAAATTAGCTAATGTGGGACTCACTCCCAACAATCCTCAACACATCATGAAACCTTTGTAAACTTTGCGCTGATGAAAAGTGAAAATTCTGTTTTGTATGAACGAGGCAGAGCTGGAAGGCAATCTGATTTTGAATTTGGAGCCAAGGGATACAGATTTTTGGTCCAACTCTTATGATTGCTTCTGTTGTCATCCATCAGTTTGCTCAGCTTTGG

mRNA sequence

GTCTCTGCTTTGGAGACGATTCTTTCTCCCATTTTCATTTTTTGTTCTTCAATTTGGCCTAAAGGATCCATGGCTGACCAACCAGGCGGGCTGGATTCGGTTACTGACAAGATCTCCGGTAAGATCGACGGCTACAATTCTTCCTCTTCCTCCGGCTCTGATGATGACCAGCCTTCAAAAATCAATGCTGTAAAATCCCACGTTTTTAGGCTCTTCGGTAGAGATAAGCCCGTTCACACGGTCTTGGGCGGTGGAAAACCTGCTGATGTTCTTCTTTGGAGGAACAAGAAGAACTCTGCAGGCATCCTTGGGGGTGCCACCGCCTTGTGGATTCTTTTTGAGCTGCTTGAGTACCAATTAATCACTCTCCTATGCCATATATTAATTCTTGTACTGGCTCTAGTTTTCACGCGGTCTTATGCCAGTTCGTTTATCAACAAGTCCCCACCACAAATCCCAGATTTTAGACTTCCTGAAGATCGTCTACTCGAGGTTGTCTCTGCATTGAGAATCGAAATCAACCATGTAATCTCCAATTTACGTAACATTGCTTCTGGGAGAGATTTGAAGAAATTCCTCCGTGCTTTTATTGGCTTATGGGTTCTATCAATGGTTGGAAGCTGGTGCAATTTTCTGACCTTGTTATACACATCCGTTGTATTGCTACACACTGTGCCAGTGCTATATGAGAAGTATGATGACCAGGTTGACGCATTTGCTGAGAAGGCTTTGATAGAGGTCAAGAAGCAGTATGCTGTATTTAACGCCGAAGTTCTGAGTAAAATCCCGATGGGGGCACTTCAAGAGAAGAAGAAGGATTAGGTTATGTGGCATTTTTGTCTGAGCTGGAAGGCAATCTGATTTTGAATTTGGAGCCAAGGGATACAGATTTTTGGTCCAACTCTTATGATTGCTTCTGTTGTCATCCATCAGTTTGCTCAGCTTTGG

Coding sequence (CDS)

ATGGCTGACCAACCAGGCGGGCTGGATTCGGTTACTGACAAGATCTCCGGTAAGATCGACGGCTACAATTCTTCCTCTTCCTCCGGCTCTGATGATGACCAGCCTTCAAAAATCAATGCTGTAAAATCCCACGTTTTTAGGCTCTTCGGTAGAGATAAGCCCGTTCACACGGTCTTGGGCGGTGGAAAACCTGCTGATGTTCTTCTTTGGAGGAACAAGAAGAACTCTGCAGGCATCCTTGGGGGTGCCACCGCCTTGTGGATTCTTTTTGAGCTGCTTGAGTACCAATTAATCACTCTCCTATGCCATATATTAATTCTTGTACTGGCTCTAGTTTTCACGCGGTCTTATGCCAGTTCGTTTATCAACAAGTCCCCACCACAAATCCCAGATTTTAGACTTCCTGAAGATCGTCTACTCGAGGTTGTCTCTGCATTGAGAATCGAAATCAACCATGTAATCTCCAATTTACGTAACATTGCTTCTGGGAGAGATTTGAAGAAATTCCTCCGTGCTTTTATTGGCTTATGGGTTCTATCAATGGTTGGAAGCTGGTGCAATTTTCTGACCTTGTTATACACATCCGTTGTATTGCTACACACTGTGCCAGTGCTATATGAGAAGTATGATGACCAGGTTGACGCATTTGCTGAGAAGGCTTTGATAGAGGTCAAGAAGCAGTATGCTGTATTTAACGCCGAAGTTCTGAGTAAAATCCCGATGGGGGCACTTCAAGAGAAGAAGAAGGATTAG

Protein sequence

MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLGGGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASSFINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIPMGALQEKKKD

Homology

[Close]

BLAST of CmaCh16G000880 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 9.5e-77
Identity = 150/252 (59.52%), Postives = 196/252 (77.78%), Query Frame = 0


Query: 9   DSVTDKISGKI--DGYNSSSSSGSDDDQPSK--------INAVKSHVFRLFGRDKPVHTV 68
           +S+ DKIS KI   G +SSSSS SDD+   K         +++KS V+RLFGR++PVH V
Sbjct: 24  ESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKV 83

Query: 69  LGGGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYA 128
           LGGGKPAD+ +W+NKK S G+LGGATA W++FEL+EY L+TLLCH++I+VLA++F  S A
Sbjct: 84  LGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNA 143

Query: 129 SSFINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWV 188
           + FINKSPP+IP+  +PE+ +L++ S LRIEIN   S+LR IASGRDLKKFL A  GLWV
Sbjct: 144 TMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWV 203

Query: 189 LSMVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSK 248
           LS++G   NFLTL Y ++VLL TVP+ Y+KY+D+VD   EKA+IE+KKQYAV + +VLSK
Sbjct: 204 LSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSK 263

Query: 249 IPMGALQEKKKD 251
           IP+G L+ KKKD
Sbjct: 264 IPLGPLKNKKKD 275

[Close]

BLAST of CmaCh16G000880 vs. ExPASy Swiss-Prot
Match: Q9SUT9 (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.6e-74
Identity = 141/248 (56.85%), Postives = 192/248 (77.42%), Query Frame = 0


Query: 9   DSVTDKISGKIDGYNSSSSSGSDDDQPSKIN------AVKSHVFRLFGRDKPVHTVLGGG 68
           +S+ +K+S KI     SSSS S DD+  K +      ++KS V+RLFGR++PVH VLGGG
Sbjct: 24  ESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGG 83

Query: 69  KPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASSFI 128
           KPAD+ +W++KK S G+ GGAT  W+LFEL+EY L+TLLCH++I+ LA++F  S A+ FI
Sbjct: 84  KPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFI 143

Query: 129 NKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMV 188
           +KSPP+IP+  +PE+ LL++ S LRIEIN  IS+LR IASGRD+KKFL A  GLWVLS++
Sbjct: 144 HKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSIL 203

Query: 189 GSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIPMG 248
           G   +FLTL Y ++VLL TVP+ Y+KY+D+VD++ EKA+ E+KKQYAV +A+V SKIP G
Sbjct: 204 GGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRG 263

Query: 249 ALQEKKKD 251
            L++KKKD
Sbjct: 264 PLKDKKKD 271

[Close]

BLAST of CmaCh16G000880 vs. ExPASy Swiss-Prot
Match: Q9SH59 (Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.4e-72
Identity = 148/255 (58.04%), Postives = 187/255 (73.33%), Query Frame = 0


Query: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MA++    +S+ +KIS KI G++ SSSS SD D      ++K+ ++RLFGR++P+H + G
Sbjct: 1   MAEEHKHEESIMEKISEKIHGHDDSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120
           GGKPAD+ LWRNKK S G+LG AT  WILFELLEY L+TL  HI IL LA++F  S AS+
Sbjct: 61  GGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSAST 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FI+KSP  IP+  +PED +L++ S LRIEIN   + LR+IASGRDLKKFL    GLWVLS
Sbjct: 121 FIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVL---- 240
            VGS CNFLTL+Y + VLL T+PVLYEKY+D+VD F EKA+ E+KKQY  F+ +VL    
Sbjct: 181 KVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVM 240

Query: 241 SKIPMGALQ-EKKKD 251
           SKIP GA    KKKD
Sbjct: 241 SKIPKGAFAFIKKKD 255

[Close]

BLAST of CmaCh16G000880 vs. ExPASy Swiss-Prot
Match: Q9FFS0 (Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 5.4e-72
Identity = 145/248 (58.47%), Postives = 184/248 (74.19%), Query Frame = 0


Query: 9   DSVTDKISGKIDGYNSSSS-SGSDDDQ---PSKINAVKSHVFRLFGRDKPVHTVLGGGKP 68
           +S+ +KI  KI G+  SSS S SDDD+    S  ++ KS ++RLFGR+KPVH VLGGGKP
Sbjct: 9   ESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKP 68

Query: 69  ADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASSFINK 128
           AD+ LWRNKK S G+LG  TA W+LFEL EY L+  LCH  I  LA +F  S A +FI+K
Sbjct: 69  ADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHK 128

Query: 129 SPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGS 188
           S P IP+  +PED +L++VS LRIEIN  ++ LRNIASG+D+KKF+    GLWVLS++GS
Sbjct: 129 STPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGS 188

Query: 189 WCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVL----SKIP 248
             NFLTL YT+ VLL T+PVLYEKY+D+VDA+ EKA+ E+KKQYAV + +VL    SKIP
Sbjct: 189 CYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIP 248

[Close]

BLAST of CmaCh16G000880 vs. ExPASy Swiss-Prot
Match: O82352 (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.6e-71
Identity = 137/241 (56.85%), Postives = 186/241 (77.18%), Query Frame = 0


Query: 9   DSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLGGGKPADVL 68
           +S+ +KIS KI  ++SSSSS S+ ++P   +AVK+ ++R+FGR+KPVH VLGGGKPADV 
Sbjct: 13  ESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVF 72

Query: 69  LWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASSFINKSPPQ 128
           LWR+KK S  +LG ATA+W+LFEL+EY L++LLCHI IL L  +F  S A + INK+ PQ
Sbjct: 73  LWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQ 132

Query: 129 IPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGSWCNF 188
           IP+  +PE+  L V S+LR E+N     LR+IA GRDLKKFL   +GLW++S+VG+W NF
Sbjct: 133 IPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNF 192

Query: 189 LTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIPMGALQEKK 248
           LTL+Y   V+LHTVP+LYEK++D+VD  AEKA+ E++KQY VF+ +VLSKIP+ +L+ K 
Sbjct: 193 LTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAKA 252

Query: 249 K 250
           K
Sbjct: 253 K 253

[Close]

BLAST of CmaCh16G000880 vs. ExPASy TrEMBL
Match: A0A6J1JBF9 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482938 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 5.7e-133
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG
Sbjct: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120
           GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS
Sbjct: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS
Sbjct: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP
Sbjct: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240

Query: 241 MGALQEKKKD 251
           MGALQEKKKD
Sbjct: 241 MGALQEKKKD 250

[Close]

BLAST of CmaCh16G000880 vs. ExPASy TrEMBL
Match: A0A6J1EA75 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111430763 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 6.5e-129
Identity = 243/250 (97.20%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQPGGLDSV +KISGKIDGYNSSSSSGSDD  PSKINAVKSHVFRLFGRDKPVHTVLG
Sbjct: 1   MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120
           GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITL+CHILILVLALVFTRSYASS
Sbjct: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLVCHILILVLALVFTRSYASS 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS
Sbjct: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVF+AEVLSKIP
Sbjct: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFSAEVLSKIP 240

Query: 241 MGALQEKKKD 251
           MGAL+EKKKD
Sbjct: 241 MGALKEKKKD 250

[Close]

BLAST of CmaCh16G000880 vs. ExPASy TrEMBL
Match: A0A0A0L7V4 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G363160 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 6.1e-103
Identity = 193/250 (77.20%), Postives = 221/250 (88.40%), Query Frame = 0


Query: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQP   DSV D  S KID + SSSSS SDDD PSK +AVK HV+RLFGRDKPVHTVLG
Sbjct: 1   MADQPAEPDSVIDNFSAKIDDHISSSSSDSDDDHPSKPDAVKCHVYRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120
           GGKPADV LW+NKKNSAG+LGGATALWILFELLEYQLITL+CHILI++LA+ F  SYA++
Sbjct: 61  GGKPADVFLWKNKKNSAGVLGGATALWILFELLEYQLITLVCHILIILLAIPFLWSYANT 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINK+PPQIPD RLPED LL+VV++LRIEIN +IS LR++ASGRDL+KFL AF+GLW+LS
Sbjct: 121 FINKTPPQIPDVRLPEDCLLQVVTSLRIEINRIISTLRDVASGRDLRKFLSAFLGLWILS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           + GSWCNFLTLLY   +LLHTVPVLYEKY+DQVD FAEKALIE+KKQYA F+A+VLSKIP
Sbjct: 181 IAGSWCNFLTLLYMCFILLHTVPVLYEKYEDQVDPFAEKALIELKKQYAEFDAKVLSKIP 240

Query: 241 MGALQEKKKD 251
           +G LQEKKKD
Sbjct: 241 LGPLQEKKKD 250

[Close]

BLAST of CmaCh16G000880 vs. ExPASy TrEMBL
Match: A0A6J1G1W3 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449937 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.7e-97
Identity = 193/249 (77.51%), Postives = 213/249 (85.54%), Query Frame = 0


Query: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQP   DSV DKIS KI    SSSSS SDD   SKI+AVKS VFRLFGRDKPVHTVLG
Sbjct: 1   MADQPRERDSVIDKISDKIGDCISSSSSDSDDGLHSKIDAVKSRVFRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120
           GGKPADV LWRNKKNSAGILG ATALWI+FEL+EYQLITL+CH+LIL+LA++F  SYA++
Sbjct: 61  GGKPADVFLWRNKKNSAGILGVATALWIVFELIEYQLITLVCHLLILLLAIMFLWSYANT 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINK+PPQIPD +LPE   L+ VSALRIEIN  IS LR IA GRDLKKFL  F+GLWVLS
Sbjct: 121 FINKTPPQIPDMKLPEVCFLQFVSALRIEINRAISILRGIACGRDLKKFLSVFLGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           +VGSWCNFLTLLY S+VLLHTVPV YEKY+DQVD  AEKA IE KKQYAVF+A+VLSKIP
Sbjct: 181 VVGSWCNFLTLLYISIVLLHTVPVFYEKYEDQVDPLAEKAWIEFKKQYAVFDAKVLSKIP 240

Query: 241 MGALQEKKK 250
           +GALQEKKK
Sbjct: 241 IGALQEKKK 249

[Close]

BLAST of CmaCh16G000880 vs. ExPASy TrEMBL
Match: A0A6J1HXQ1 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467592 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.2e-97
Identity = 193/249 (77.51%), Postives = 213/249 (85.54%), Query Frame = 0


Query: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQP   DSV DKIS KI    SSSSS SDD   SKI+AVKS VFRLFGRDKPVHTVLG
Sbjct: 1   MADQPRERDSVIDKISDKIGDCISSSSSDSDDGLHSKIDAVKSRVFRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120
           GGKPADV LWRNKKNSAGILG ATALWI+FEL+EYQLITL+CH+LIL+LA++F  SYA++
Sbjct: 61  GGKPADVFLWRNKKNSAGILGVATALWIVFELIEYQLITLVCHLLILLLAIMFLWSYANT 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINK+PPQIPD +LPE   L+ VSALRIEIN  IS LR IA GRDLKKFL  F+GLWVLS
Sbjct: 121 FINKTPPQIPDVKLPEVCFLQFVSALRIEINRAISILRGIACGRDLKKFLSVFLGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           +VGSWCNFLTLLY S+VLLHTVPV YEKY+DQVD  AEKA IE KKQYAVF+A+VLSKIP
Sbjct: 181 VVGSWCNFLTLLYISIVLLHTVPVFYEKYEDQVDPLAEKAWIEFKKQYAVFDAKVLSKIP 240

Query: 241 MGALQEKKK 250
           +GALQEKKK
Sbjct: 241 IGALQEKKK 249

[Close]

BLAST of CmaCh16G000880 vs. NCBI nr
Match: XP_022984754.1 (reticulon-like protein B1 [Cucurbita maxima])

HSP 1 Score: 483.4 bits (1243), Expect = 1.2e-132
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG
Sbjct: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120
           GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS
Sbjct: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS
Sbjct: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP
Sbjct: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240

Query: 241 MGALQEKKKD 251
           MGALQEKKKD
Sbjct: 241 MGALQEKKKD 250

[Close]

BLAST of CmaCh16G000880 vs. NCBI nr
Match: KAG7014737.1 (Reticulon-like protein B1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 471.5 bits (1212), Expect = 4.6e-129
Identity = 243/250 (97.20%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQPGGLDSV +KISGKIDGYNSSSSSGSDD  PSKINAVKSHVFRLFGRDKPVHTVLG
Sbjct: 1   MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120
           GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQL+TL+CHILILVLALVFTRSYASS
Sbjct: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASS 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS
Sbjct: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP
Sbjct: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240

Query: 241 MGALQEKKKD 251
           MGAL+EKKKD
Sbjct: 241 MGALKEKKKD 250

[Close]

BLAST of CmaCh16G000880 vs. NCBI nr
Match: XP_022922933.1 (reticulon-like protein B1 [Cucurbita moschata] >XP_022922934.1 reticulon-like protein B1 [Cucurbita moschata] >XP_022922935.1 reticulon-like protein B1 [Cucurbita moschata])

HSP 1 Score: 469.9 bits (1208), Expect = 1.3e-128
Identity = 243/250 (97.20%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQPGGLDSV +KISGKIDGYNSSSSSGSDD  PSKINAVKSHVFRLFGRDKPVHTVLG
Sbjct: 1   MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120
           GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITL+CHILILVLALVFTRSYASS
Sbjct: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLVCHILILVLALVFTRSYASS 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS
Sbjct: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVF+AEVLSKIP
Sbjct: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFSAEVLSKIP 240

Query: 241 MGALQEKKKD 251
           MGAL+EKKKD
Sbjct: 241 MGALKEKKKD 250

[Close]

BLAST of CmaCh16G000880 vs. NCBI nr
Match: XP_023553084.1 (reticulon-like protein B1 [Cucurbita pepo subsp. pepo] >XP_023553085.1 reticulon-like protein B1 [Cucurbita pepo subsp. pepo] >XP_023553086.1 reticulon-like protein B1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 469.5 bits (1207), Expect = 1.7e-128
Identity = 242/250 (96.80%), Postives = 246/250 (98.40%), Query Frame = 0


Query: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQPGGLDSV DKISGKIDGYNSSSSSGSDD  PSKINAVKSHVFRLFGRDKPVHTVLG
Sbjct: 1   MADQPGGLDSVIDKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120
           GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITL+CHILILVLALVFTRSYASS
Sbjct: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLVCHILILVLALVFTRSYASS 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINKSPPQIPDFRLPEDRLLEVVSA+RI+INHVISNLRNIASGRDLKKFLRAFIGLWVLS
Sbjct: 121 FINKSPPQIPDFRLPEDRLLEVVSAMRIKINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIE KKQYAVFNAEVLSKIP
Sbjct: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEFKKQYAVFNAEVLSKIP 240

Query: 241 MGALQEKKKD 251
           MGAL+EKKKD
Sbjct: 241 MGALKEKKKD 250

[Close]

BLAST of CmaCh16G000880 vs. NCBI nr
Match: KAG6576686.1 (Reticulon-like protein B1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 466.5 bits (1199), Expect = 1.5e-127
Identity = 242/250 (96.80%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQPGGLDSV +KISGKIDGYNSSSSSGSDD  PSKINAVKSHVFRLFGRDKPVHTVLG
Sbjct: 1   MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120
           GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITL+CHILILVLALVFT SYASS
Sbjct: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLVCHILILVLALVFTLSYASS 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS
Sbjct: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEV SKIP
Sbjct: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVPSKIP 240

Query: 241 MGALQEKKKD 251
           MGAL+EKKKD
Sbjct: 241 MGALKEKKKD 250

[Close]

BLAST of CmaCh16G000880 vs. TAIR 10
Match: AT4G23630.1 (VIRB2-interacting protein 1 )

HSP 1 Score: 288.1 bits (736), Expect = 6.7e-78
Identity = 150/252 (59.52%), Postives = 196/252 (77.78%), Query Frame = 0


Query: 9   DSVTDKISGKI--DGYNSSSSSGSDDDQPSK--------INAVKSHVFRLFGRDKPVHTV 68
           +S+ DKIS KI   G +SSSSS SDD+   K         +++KS V+RLFGR++PVH V
Sbjct: 24  ESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKV 83

Query: 69  LGGGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYA 128
           LGGGKPAD+ +W+NKK S G+LGGATA W++FEL+EY L+TLLCH++I+VLA++F  S A
Sbjct: 84  LGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNA 143

Query: 129 SSFINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWV 188
           + FINKSPP+IP+  +PE+ +L++ S LRIEIN   S+LR IASGRDLKKFL A  GLWV
Sbjct: 144 TMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWV 203

Query: 189 LSMVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSK 248
           LS++G   NFLTL Y ++VLL TVP+ Y+KY+D+VD   EKA+IE+KKQYAV + +VLSK
Sbjct: 204 LSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSK 263

Query: 249 IPMGALQEKKKD 251
           IP+G L+ KKKD
Sbjct: 264 IPLGPLKNKKKD 275

[Close]

BLAST of CmaCh16G000880 vs. TAIR 10
Match: AT4G11220.1 (VIRB2-interacting protein 2 )

HSP 1 Score: 280.0 bits (715), Expect = 1.8e-75
Identity = 141/248 (56.85%), Postives = 192/248 (77.42%), Query Frame = 0


Query: 9   DSVTDKISGKIDGYNSSSSSGSDDDQPSKIN------AVKSHVFRLFGRDKPVHTVLGGG 68
           +S+ +K+S KI     SSSS S DD+  K +      ++KS V+RLFGR++PVH VLGGG
Sbjct: 24  ESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGG 83

Query: 69  KPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASSFI 128
           KPAD+ +W++KK S G+ GGAT  W+LFEL+EY L+TLLCH++I+ LA++F  S A+ FI
Sbjct: 84  KPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFI 143

Query: 129 NKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMV 188
           +KSPP+IP+  +PE+ LL++ S LRIEIN  IS+LR IASGRD+KKFL A  GLWVLS++
Sbjct: 144 HKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSIL 203

Query: 189 GSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIPMG 248
           G   +FLTL Y ++VLL TVP+ Y+KY+D+VD++ EKA+ E+KKQYAV +A+V SKIP G
Sbjct: 204 GGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRG 263

Query: 249 ALQEKKKD 251
            L++KKKD
Sbjct: 264 PLKDKKKD 271

[Close]

BLAST of CmaCh16G000880 vs. TAIR 10
Match: AT1G64090.1 (Reticulan like protein B3 )

HSP 1 Score: 273.5 bits (698), Expect = 1.7e-73
Identity = 148/255 (58.04%), Postives = 187/255 (73.33%), Query Frame = 0


Query: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MA++    +S+ +KIS KI G++ SSSS SD D      ++K+ ++RLFGR++P+H + G
Sbjct: 1   MAEEHKHEESIMEKISEKIHGHDDSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120
           GGKPAD+ LWRNKK S G+LG AT  WILFELLEY L+TL  HI IL LA++F  S AS+
Sbjct: 61  GGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSAST 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FI+KSP  IP+  +PED +L++ S LRIEIN   + LR+IASGRDLKKFL    GLWVLS
Sbjct: 121 FIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVL---- 240
            VGS CNFLTL+Y + VLL T+PVLYEKY+D+VD F EKA+ E+KKQY  F+ +VL    
Sbjct: 181 KVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVM 240

Query: 241 SKIPMGALQ-EKKKD 251
           SKIP GA    KKKD
Sbjct: 241 SKIPKGAFAFIKKKD 255

[Close]

BLAST of CmaCh16G000880 vs. TAIR 10
Match: AT5G41600.1 (VIRB2-interacting protein 3 )

HSP 1 Score: 272.3 bits (695), Expect = 3.8e-73
Identity = 145/248 (58.47%), Postives = 184/248 (74.19%), Query Frame = 0


Query: 9   DSVTDKISGKIDGYNSSSS-SGSDDDQ---PSKINAVKSHVFRLFGRDKPVHTVLGGGKP 68
           +S+ +KI  KI G+  SSS S SDDD+    S  ++ KS ++RLFGR+KPVH VLGGGKP
Sbjct: 9   ESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKP 68

Query: 69  ADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASSFINK 128
           AD+ LWRNKK S G+LG  TA W+LFEL EY L+  LCH  I  LA +F  S A +FI+K
Sbjct: 69  ADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHK 128

Query: 129 SPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGS 188
           S P IP+  +PED +L++VS LRIEIN  ++ LRNIASG+D+KKF+    GLWVLS++GS
Sbjct: 129 STPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGS 188

Query: 189 WCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVL----SKIP 248
             NFLTL YT+ VLL T+PVLYEKY+D+VDA+ EKA+ E+KKQYAV + +VL    SKIP
Sbjct: 189 CYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIP 248

[Close]

BLAST of CmaCh16G000880 vs. TAIR 10
Match: AT2G46170.1 (Reticulon family protein )

HSP 1 Score: 270.8 bits (691), Expect = 1.1e-72
Identity = 137/241 (56.85%), Postives = 186/241 (77.18%), Query Frame = 0


Query: 9   DSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLGGGKPADVL 68
           +S+ +KIS KI  ++SSSSS S+ ++P   +AVK+ ++R+FGR+KPVH VLGGGKPADV 
Sbjct: 13  ESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVF 72

Query: 69  LWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASSFINKSPPQ 128
           LWR+KK S  +LG ATA+W+LFEL+EY L++LLCHI IL L  +F  S A + INK+ PQ
Sbjct: 73  LWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQ 132

Query: 129 IPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGSWCNF 188
           IP+  +PE+  L V S+LR E+N     LR+IA GRDLKKFL   +GLW++S+VG+W NF
Sbjct: 133 IPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNF 192

Query: 189 LTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIPMGALQEKK 248
           LTL+Y   V+LHTVP+LYEK++D+VD  AEKA+ E++KQY VF+ +VLSKIP+ +L+ K 
Sbjct: 193 LTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAKA 252

Query: 249 K 250
           K
Sbjct: 253 K 253

The following BLAST results are available for this feature:

BLAST of CmaCh16G000880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUR3	9.5e-77	59.52	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]
Q9SUT9	2.6e-74	56.85	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]
Q9SH59	2.4e-72	58.04	Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1	[more]
Q9FFS0	5.4e-72	58.47	Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1	[more]
O82352	1.6e-71	56.85	Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1	[more]

BLAST of CmaCh16G000880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JBF9	5.7e-133	100.00	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482938 PE=4 SV=1	[more]
A0A6J1EA75	6.5e-129	97.20	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111430763 PE=4 SV=1	[more]
A0A0A0L7V4	6.1e-103	77.20	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G363160 PE=4 SV=1	[more]
A0A6J1G1W3	1.7e-97	77.51	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449937 PE=4 SV=1	[more]
A0A6J1HXQ1	2.2e-97	77.51	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467592 PE=4 SV=1	[more]

BLAST of CmaCh16G000880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022984754.1	1.2e-132	100.00	reticulon-like protein B1 [Cucurbita maxima]	[more]
KAG7014737.1	4.6e-129	97.20	Reticulon-like protein B1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022922933.1	1.3e-128	97.20	reticulon-like protein B1 [Cucurbita moschata] >XP_022922934.1 reticulon-like pr...	[more]
XP_023553084.1	1.7e-128	96.80	reticulon-like protein B1 [Cucurbita pepo subsp. pepo] >XP_023553085.1 reticulon...	[more]
KAG6576686.1	1.5e-127	96.80	Reticulon-like protein B1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmaCh16G000880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23630.1	6.7e-78	59.52	VIRB2-interacting protein 1	[more]
AT4G11220.1	1.8e-75	56.85	VIRB2-interacting protein 2	[more]
AT1G64090.1	1.7e-73	58.04	Reticulan like protein B3	[more]
AT5G41600.1	3.8e-73	58.47	VIRB2-interacting protein 3	[more]
AT2G46170.1	1.1e-72	56.85	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 65..220 e-value: 1.5E-56 score: 190.7
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 64..250 score: 45.30006
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..36
None	No IPR available	PANTHER	PTHR10994:SF156	RETICULON-LIKE PROTEIN	coord: 8..250
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 8..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G000880.1	CmaCh16G000880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane