CmaCh16G000160 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G000160
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein TRANSPARENT TESTA GLABRA 1
Location	Cma_Chr16: 92428 .. 100881 (+)
RNA-Seq Expression	CmaCh16G000160
Synteny	CmaCh16G000160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAACGCTGCCCCAAGATCCGAATTCATGGCCACCTACGATTCCCCGCACCCTCTCTATGCCATGGCCATCTCTTCCGCCCACACCCACTCTCGCAATTTCCCCAATCGCATAGCCCTTGGTAGCTTCATCGAACAGTGCACCAACCGTGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTCAAACGCATCCTTCTCTCTCCTTCGACCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAATGCCCTCTCCTCTCTCCGCAACTCCTCCGACATCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGCAAGTTGGAGATTCTTCTATCGAACCCCTCTCTGTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCCTTAACTTCCTTCGACTGGAATGAAGTCGAGCCCAAGAGAATTGGAACCTCCAGCATTGATACCACTTGTACTATTTGGGATATTGAGAAGAGCGTGGTTGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCGTGGGGGGAAGCCCGGGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTCAGGATTTTCGACTTGAGAGATAAAGAGCACTCCACCATTATATACGAAAGCCCCCAACCCGATTCCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATTTTGATGGATAGCAACAAAGTTGTTATTTTGGACATTCGCTCGCCAAGTGTGCCGGTTGCTGAGTTGGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCACGGAGCTGCAGACATATTTGCTCCGCTGGGGATGACAAACAGGCGCTTATTTGGGAGTTGCCAATGGTTGCAGGCCCGAATGGCATTGATCCAATGTCCATGTATTCTGCTGCACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAGCCTGATTGGATTGCTCTGGCATTTTCTAACAAGATGCAGCTTTTGAAAGTTTGAGGTCTGAGAACGTTTTCCACTGTACCTATTGTGTATCAACTACTGCTATATATTTTCTTACCTTCGTTTTCCCCTGTTCTATATAAGCCACATATATTGCTATAGGCGTAGTTTTAGTTTCAGTGCTAAGATGTTATTGCTACTCGGATGGTATAAATGTTGATGCTTCATCTTGCCAACAGACGGCGCAATTTAAGTTACTTCGCTTGAATTCCTTATATTTAATCAAACCTAAGCTAGCCACTTTCTTATCCCTCCAAAGTTTGATTTGTTTATTTTATTTGCATTACATTAGGCAATAGGAGCAGGCTTTGTTGTTTTGAGTTCTAATGCTATGTATCCCTCAACTCTGTTGGAAACCAAGGAAGAACAGCTACCTTCACACACTGCTGATCCTTGCTTCCAACATATACGCCAGTTTGGATCAAGGGTTGTTGACAATGGGAGAATCTACTTGTTCTCTTGCAATGTTGATTTGAATTTCCGATGGTTCGTTCTACTATAAGTTGACAAGTGGAAGTGTGTCATTTGCCTAGGTTCTGGGTTCTTGGGCTTGCCAAATGCATGTCATGACTTTTATTGAGTGTTAAGAAGATGAAGACAGAAGGCATTTCTAGTTTATAATCTCAGCTTATGAGGTGAGATATGATTGGATTGGCTAGAGTTGATACATAACCCAAGTTGCAATAATAATGTAGCTATTCATTCAGATTCTGAAGATTCAATGGCAGCCACAGCTTTTACTAAAAATCGTTCATGATGTGGGGCTGAAATTAACAACAAAAATATGTTTTTTTCTTTTAATGTTCATGATGCAGACTAGGGATCATTTTTTTTAATTGAGAACCCTTCATCATGAACAAAAGTTGTGGAGTCCAACAGAGAACCCTTCCTCCCTGCTTGCATCCATCTTTAACGCAGTCGCTTGATGCACCAAGACGTCTTTATGAGCTCATCTGATATGGGTAAAAGTTGGTACTGAATATCTATCCAGACTGTCCTGTTGCATGGCAGAGTGAGAGTACACAGATACAAAGACCCACTGCGCATTTTATGAAAGAAAATGGGACACCTAATGGAGTAATATCCAAGTGGTCCATCAGCTGAGATGGAGACCGTCAAATTATCCAAATGTTGCATTGGGAGACAGTTCCCTTGGGATTTCGGATAACGCACACAACCCACCAGATCTTTTAACTATGGTTTGGAAAATCCCATTTTGTTAAGCCTCCTCTTCTAACCTACAAAATTGAAGTTTAAATTACATTTATTTAAGAAGATTGATGCTGCAGTGGCACGGGATTCGTCCTGCGTCCACAAAAAGGCCTCGCTCTCTTTATCCATCTGTTTCCCTTCTCTCCCCATCTCTCTCCTTGTTTCTTCAGTTTTCAAATTCCTGTTTCCATTCCCATGGCCGCTCTCACCTCTTCTATGCAAACGAATCTCCTCTCCGCCCATTCCTTAACGCCTTCTTCTTCTTCTTCTTCTTCTACAGTTTCTACTTTTCCTACCTCCTTCTCGCTTCCCACCTCTACCAACTCCGCTGTTCTCAAAATTCACGCTCTCTCTTCCCATGCTTCTGCTTTCTTCAACTCCTGCAACCACTGCTTTCGGACCATTGTGATAGCACCTCGCAAACGTCATGCCACAAGATCTTTCAGTATTCGGATGTCCTGGGACGGCCCTCTCTCTTCCGTCAAATTAATTGTTCAAGGCAAAAATTTGGAGGTATTTTAGCTTCATATTCGCTCTTGTTTCTCAGGCAATGCAAGCTTCTGTTCCAATTCTTGTTTTCATTTTTTTTTTCATGTGTTTCCTACTGCGCTGAAATGTTCGAGTCTTAGGTCTGTCCAGGACTTCTTTACTAGTGAGTGTCTCGTCTAGTCGTTTTCTAATGATTCGGTTCCTTAATCACCTCGTGCTCCTTATTGGGAGTAAGATCTAGAGAGAAATCTCGTGCTCCTTATTCGTGTTCCTTAATCGACCTGCTAACTCACTACCCTTAATAATTGAAGCGTGATGCCAAAACTATCCACTGATTACAAACCTAAACCATTTCTCCCCGCGAACTGAACATTGCAAACACTAATTAGAAACCTATTCCACTGTGTTTCTCCCTTTACTCAAAGCCTAGCCTTGTATTTCTCAACTTCTCCATTACTTTTATTTTCTCCACTTACAACTGCTAATTTCTATGCGTCATTTCTCATGCGTTTTCCATATCAAAACTCATGTCCCTTCTCCATGTTTTACTCTACACAGCCTCCCTGAAATGATCGGTATCAACAATAGTAAGCATGGCATCAGGAATCCACTACCATTTTTTTTTTCTTTCTAAAAAAGGTCCTCACCCTATTTCCTAACTTCATCCAATTTGCTAGATTATTTCATTTTGGGTAACACGCAATGGCAACTTCGTATTTCCCAATTTCAATTGTTTTCTTCTTCCGGTACAACATATCTGCTTGAGGGATTCCTTTGTAAAATTGGATCACGAAATCTATAGGCCCTTGGCTTTTCACTAAACCAAGCCGCACAACTCGAGCTTTATCATCCTGCTTAGTTCTTGAGCATGATTCACACATCCAAAAGCAGTTAAGTACTCAACAGGCCAACTCCACTCCCATTTGGAGTTCTTATTTTAGTGGGTCCTACCTGGAGACATACTGAAAACTTCTTCCAAATCAAAAGAAACAAAAGAAAAAATGGGCTTGTTGGGAAGAAAGATGGTGTGTAGAACACATGTAAGGCACAGTTGGGTTACATGTAAGGCACAGTCGGTTGATCACGCAACAGATCTCTATCTCTCTCTAGATATCTAGAGATGGAGAGAAATGTGATAGTATGAAAGGTTTGGAACTCGAATTCCACTGGACGAGGGTATGGGATTGCTTGACTACATGCAAAAGCTTTTCCTTCAGCTGGATTGAATAATGATCTTTATTTTCAGACTTACACTTAATGTTTGCGAGGCCAAGGTGAAGAACTGGTTAAGCTTAAGCTTGGTTGATTTTGTTAAGGTGAAGAACTGGTTAAGCTTAAGCTTGGTTGATTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGTGAAGAACTGGTTAAGCTTAAGCTTGGTTGATTTTGTTAAGGTGAAGAACTGGTTAAGCTTAAGCTTGGTTGATTTTGTCAAGGTGAAAGAACTGGTTAAGCTTGGTTGATTTTGTCAGAAAAGAAAGTAGGTTACACTGGTTCATTGATTAGTAAACTTCCAATGTTGGTAAAGCTTAGCTAATGCCATACCCACGAGATCCAAAGCCATACCCACCAGATCCCATAGTGACTTGGCTTTCGGGGTGGTTCTCCGTGGACAATGCCATACCCACCCCACTACGTAGTAATTATATCAATCATGTACGTGTCATCCCTCCATTCTGATTGGTATATCATGAAAAAATCAAGCCATTTGCACTGGGCGTACTGCTTTCTCTCGCCCAATGTTAGCCTTTTCCGCTCGTTTGTTAATTCAACCTGCAAGTCTATTTCTTTGAATTAGTACTGGTTTCTAGGAAAGTTGTTAATGATAATTTAGTCAGTTAGCTTAAGTTGCTATACTTGGAGATACCGGCTAGAGTTGGGTAAGTGTAGTTTGTTGCTGATTTTATGGAGTTAACTAGGCTATTTTTAGCATTTGGAATTTGTATTTATAGTGACAAGTGATTGAATATAACTGTTCACTTCCCAATTCTTCTCTATCTATTAAGAACAGCACCACTGTGAACAGCCTAATTTGCTGGTTCTGGCCAGAAGAAATTTGGGCGTTCTTTAAGCATAGTAGTAGTCATTAAGATTATGTTTTTAAAGCATGCGAATCTCCAAATTGGTGGTCATATCATTCTTGTATACAACTACATTTAGTTATGTGTTTATGCAACCGTCAGTTGTTGAATGCTATTTGAACTCAAAAATTGGTGAGCGCATGCGAAACTCTTTTCAATCAGTACATAGGGGCATATGGCCTTTCCTACTGATCAAAACAAGTTTGAAAAGTCCACACATTAGAGTGTACTCTTTGAAGCATAATGTGAAACTCTCTAGCTCCTTTCACGCCATTGATTTCCTTTGTCGATTACGAAGTAAACATTGCGTAAATTTGGAAGAGACTTAAGCTAAGCTCTAGATATGTTGAAGTTTCATTAAGCCCTTCAACTCAGCTATCCATGTCTTCAATGCTAAAGCTGCACAATATCTTCACCAGTAGATACTATAGGTTAAGGTATAACTTTGAGCATGAACTTATTCACCGCCATTATTAGACTCTTCCAAGATGGAAATACCTTGCACTTTCTTTCCTAAAATAGGGACACAAAGAATTTAAAATTTGCATTCTAAATCGATATGAAAGTAGTTTGAAGATAATATCTGTAGAGTCAAATCAAAAGGGCTAGCTTCAAATTCATTGAAGAGAAAATCAAAAGGGCTAGCTTCAAATTCATTGAAGAGAAAATCAAAAGGGCTAGCTTCAAATTCATTGAAGAGAAGGTTTAGAAACTAACCATTGACTGTAGGTCATCTTCTCCAACTTGCGTTTGTGCCATTCTGCTTTTTTTCTCTTTTTTGAATTTTTTTTTATTTGTTTTCTTAAAATTTCCGGTGCTACAATAGCACTACTCTGATCGACAAATTGTTATTCAGCCCTTTACAGCACTGCTAACACGTGTAAAAAAATTACCTTGTTGGTAGAAACTCCAATGAGAATGACAAGACCATCAACTAGCTATCGGAATTTCAATTACCCAATTTATCATATCTCAATGTTTCAAATGTCGGACCTTGAGTGGATTTATTTTTTTACTGCGCAAAATACTAGTTGACTGAGGCAGTTAAGAAGCACGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTGGATGTCAGACTATCAGTTAGAGGTGGAGAGTTTGGGAAGGGCCCAAGAATTAGAAGATGCGAGGTATTGTATTGTTCCTTTATTTTAAATTTCTCCATATGAATTGAATTCTCTTTCTTTTCTAAAAACATTTGTGTTTGTGTAGGTTACTTTATTCACGAAGAAGCATGGAGTTGTACGAGCAGAGGAAGATGCCGAGACCGTGTATGCAAGCATTGATTTGGTATCTTCCATCATGCAGAGAAAGCTGAGAAAGATTAAAGAGAAAGATTCAGATCATGGCCGGCACATGAAAGGATTTGACAGATCCAAAATAAGAGAACCTGCGCCAATAGTAGTTGAAGATGAGGAAGAGGAAGTTTCTCAGGAAGATGGTGGAGAAGCTATTGATGAGGTTATTCCTTCAACCTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCTTGAGTTCATTTTGCTGCATATATTAATCATTTAAGGTGATATTAGCTTGTACAAACTCATGGATTCCATATTTACTATTTTCCACGTGTTGAAGCTAATATGAGTGCCAGAGTTACTAAACCACAGCTGTTATTGCTTAGTTAGAAATTGTTGTTTAGTTTCTTATAAGGAAAAACAATCATCGATTTCGTAGTTGATTTTCTTTTTCCTATCTAGTGGAAAAACAATCATCGATTGCTCAGCATTAGTTGAACCATGTGCGGAGTAAGCAATGCATTCTCAATCTTGATTCCCCTTCTGCTGTTCTTTTTTCAACTAAATTCTCCCAAGCTCCTCGTAGTTATATTAACGGTGTGATCTCACATCGATTGGGAAGAACAACGAAACATTCTTTATAAAGTTGTGGAAACCTCTCTCTAGCAGCAAATTGTTGTGTGAAGGAATCAATATCTCGACATAAGCCAAGAGGCAGATCTTGTGCCACTCCACCTGGTCGTATGAAACTGGCATGCATCCTGGCTCCCGAGACTCTTTCATAAAATTCCAATAATTTCTCCCGCTCCTCAAAAGCCCACAGAGGAACACCTGAAAGGGAAAACCCAAAGAGGACAATATCTGGGTGGACTTACATTTACATGAACATGAAAACATAGGAAATTGGATCTTGTAGCTGTAAGATAGAGGGCTTCCTTAGTTGTGTTAAACAAACACGACTCTCCACAATTGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGCACTTTGAGCATAAGCTCTCGTGCACTTTGAGCATAAGCTCTCGTGCACTTTGAGCATAAGCTCTCGTGACTTTGCTTTGGGTTTCCCCAAAAAGCCTCATACCAGTGGAGATATTATGAACCCATGATCTTCCATTAGATTAACCAATGTGGGATTCACTCCCAATAACCTCAACAATCCTCCTCTCGAACAAAATACACCTTTTGTTCGACACTTTAGTAACTTTTGACTACACCTTTGAGGCTCACAATTCGTTCGATATTTGAGGATTTTATTGACATGGTTAAGTTTAGGGCATGACTTTGATACCATGTTAAACAAACACGACTCTCTACAATGGTATGATATTGTCCACTTTGAGCATGAACTCTCGTGGCTTTGCTTTGGGCTTCTCCAAAAGGCCTCATACCAGATCTACTGCTAGCAAATATTGTCCTTTTGGCTTTCCCTTTCGGGCTTCCCTAAGCTTTACAACGCGTCTGCTAGGAGAAAGTTTGTTCTCCTCCCCAACCAACGTGGGACATCATAATGTAGAAGCCTACTATTTGTTATTTCTTGTGGAGCTAACATTATGCTTAACTGTTGTTGATTAGCTTCTAACTTTCGGACAGTCCTTCATTGTCTACAAGGGACTGTTACATTGGAATTTCCTTTCAACTTTATCCCTTTAACCTGCTAGTTACCAAGTTGGTTCATCACAACAATTGAGACATCCTTCAAAGCTTGTATAGATCCTTTGCTCTTTATGAGTGTTTTATGGCCCCTTCCAACGTACTTGATCGTTATGGCTTTTGATTCATTTGCCTATTTTGTTGACATTCAAGTCTGGCTGGAAGAAGCAGTTGCATCTATCATTTTTAGATGACTAAATCATGCATCATATATTGGAAGCTTGTGAATAATATATCGAAATGGTTAAAATGTTGTTTTTCCTTTTTCATGTTTATCTTGATTTCAGATTGTTCGGACAAAATACTTCGATATGCCGCCTTTAACAGTTGAAGAAGCAATCGAACAACTAAAGAATATTGACCATGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGCGTTGATTTGATTATTAAAAAAAAACTTGCTTTGTTGGGATTCTGTGCTGTTTATATCGTGGCTTGTTTCATCTTTGGCCCAGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTAATCATCCCAAAAGAAAATGGCAATGCTGAGAAAATAGAAACTGTGACAGTTGAAGTAGCCAGAGAAGCCTCCTTGGCGGAATGA

mRNA sequence

ATGGCAAACGCTGCCCCAAGATCCGAATTCATGGCCACCTACGATTCCCCGCACCCTCTCTATGCCATGGCCATCTCTTCCGCCCACACCCACTCTCGCAATTTCCCCAATCGCATAGCCCTTGGTAGCTTCATCGAACAGTGCACCAACCGTGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTCAAACGCATCCTTCTCTCTCCTTCGACCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAATGCCCTCTCCTCTCTCCGCAACTCCTCCGACATCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGCAAGTTGGAGATTCTTCTATCGAACCCCTCTCTGTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCCTTAACTTCCTTCGACTGGAATGAAGTCGAGCCCAAGAGAATTGGAACCTCCAGCATTGATACCACTTGTACTATTTGGGATATTGAGAAGAGCGTGGTTGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCGTGGGGGGAAGCCCGGGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTCAGGATTTTCGACTTGAGAGATAAAGAGCACTCCACCATTATATACGAAAGCCCCCAACCCGATTCCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATTTTGATGGATAGCAACAAAGTTGTTATTTTGGACATTCGCTCGCCAAGTGTGCCGGTTGCTGAGTTGGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCACGGAGCTGCAGACATATTTGCTCCGCTGGGGATGACAAACAGGCGCTTATTTGGGAGTTGCCAATGGTTGCAGGCCCGAATGGCATTGATCCAATGTCCATGTATTCTGCTGCACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAGCCTGATTGGATTGCTCTGGCATTTTCTAACAAGATGCAGCTTTTGAAAGCAATAGGAGCAGGCTTTGTTGTTTTGAGTTCTAATGCTATGTATCCCTCAACTCTGTTGGAAACCAAGGAAGAACAGCTACCTTCACACACTGCTGATCCTTGCTTCCAACATATACGCCATTTTCAAATTCCTGTTTCCATTCCCATGGCCGCTCTCACCTCTTCTATGCAAACGAATCTCCTCTCCGCCCATTCCTTAACGCCTTCTTCTTCTTCTTCTTCTTCTACAGTTTCTACTTTTCCTACCTCCTTCTCGCTTCCCACCTCTACCAACTCCGCTGTTCTCAAAATTCACGCTCTCTCTTCCCATGCTTCTGCTTTCTTCAACTCCTGCAACCACTGCTTTCGGACCATTGTGATAGCACCTCGCAAACGTCATGCCACAAGATCTTTCAGTATTCGGATGTCCTGGGACGGCCCTCTCTCTTCCGTCAAATTAATTGTTCAAGGCAAAAATTTGGAGTTGACTGAGGCAGTTAAGAAGCACGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTGGATGTCAGACTATCAGTTAGAGGTGGAGAGTTTGGGAAGGGCCCAAGAATTAGAAGATGCGAGGTTACTTTATTCACGAAGAAGCATGGAGTTGTACGAGCAGAGGAAGATGCCGAGACCGTGTATGCAAGCATTGATTTGGTATCTTCCATCATGCAGAGAAAGCTGAGAAAGATTAAAGAGAAAGATTCAGATCATGGCCGGCACATGAAAGGATTTGACAGATCCAAAATAAGAGAACCTGCGCCAATAGTAGTTGAAGATGAGGAAGAGGAAGTTTCTCAGGAAGATGGTGGAGAAGCTATTGATGAGATTGTTCGGACAAAATACTTCGATATGCCGCCTTTAACAGTTGAAGAAGCAATCGAACAACTAAAGAATATTGACCATGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTAATCATCCCAAAAGAAAATGGCAATGCTGAGAAAATAGAAACTGTGACAGTTGAAGTAGCCAGAGAAGCCTCCTTGGCGGAATGA

Coding sequence (CDS)

ATGGCAAACGCTGCCCCAAGATCCGAATTCATGGCCACCTACGATTCCCCGCACCCTCTCTATGCCATGGCCATCTCTTCCGCCCACACCCACTCTCGCAATTTCCCCAATCGCATAGCCCTTGGTAGCTTCATCGAACAGTGCACCAACCGTGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTCAAACGCATCCTTCTCTCTCCTTCGACCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAATGCCCTCTCCTCTCTCCGCAACTCCTCCGACATCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGCAAGTTGGAGATTCTTCTATCGAACCCCTCTCTGTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCCTTAACTTCCTTCGACTGGAATGAAGTCGAGCCCAAGAGAATTGGAACCTCCAGCATTGATACCACTTGTACTATTTGGGATATTGAGAAGAGCGTGGTTGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCGTGGGGGGAAGCCCGGGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTCAGGATTTTCGACTTGAGAGATAAAGAGCACTCCACCATTATATACGAAAGCCCCCAACCCGATTCCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATTTTGATGGATAGCAACAAAGTTGTTATTTTGGACATTCGCTCGCCAAGTGTGCCGGTTGCTGAGTTGGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCACGGAGCTGCAGACATATTTGCTCCGCTGGGGATGACAAACAGGCGCTTATTTGGGAGTTGCCAATGGTTGCAGGCCCGAATGGCATTGATCCAATGTCCATGTATTCTGCTGCACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAGCCTGATTGGATTGCTCTGGCATTTTCTAACAAGATGCAGCTTTTGAAAGCAATAGGAGCAGGCTTTGTTGTTTTGAGTTCTAATGCTATGTATCCCTCAACTCTGTTGGAAACCAAGGAAGAACAGCTACCTTCACACACTGCTGATCCTTGCTTCCAACATATACGCCATTTTCAAATTCCTGTTTCCATTCCCATGGCCGCTCTCACCTCTTCTATGCAAACGAATCTCCTCTCCGCCCATTCCTTAACGCCTTCTTCTTCTTCTTCTTCTTCTACAGTTTCTACTTTTCCTACCTCCTTCTCGCTTCCCACCTCTACCAACTCCGCTGTTCTCAAAATTCACGCTCTCTCTTCCCATGCTTCTGCTTTCTTCAACTCCTGCAACCACTGCTTTCGGACCATTGTGATAGCACCTCGCAAACGTCATGCCACAAGATCTTTCAGTATTCGGATGTCCTGGGACGGCCCTCTCTCTTCCGTCAAATTAATTGTTCAAGGCAAAAATTTGGAGTTGACTGAGGCAGTTAAGAAGCACGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTGGATGTCAGACTATCAGTTAGAGGTGGAGAGTTTGGGAAGGGCCCAAGAATTAGAAGATGCGAGGTTACTTTATTCACGAAGAAGCATGGAGTTGTACGAGCAGAGGAAGATGCCGAGACCGTGTATGCAAGCATTGATTTGGTATCTTCCATCATGCAGAGAAAGCTGAGAAAGATTAAAGAGAAAGATTCAGATCATGGCCGGCACATGAAAGGATTTGACAGATCCAAAATAAGAGAACCTGCGCCAATAGTAGTTGAAGATGAGGAAGAGGAAGTTTCTCAGGAAGATGGTGGAGAAGCTATTGATGAGATTGTTCGGACAAAATACTTCGATATGCCGCCTTTAACAGTTGAAGAAGCAATCGAACAACTAAAGAATATTGACCATGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTAATCATCCCAAAAGAAAATGGCAATGCTGAGAAAATAGAAACTGTGACAGTTGAAGTAGCCAGAGAAGCCTCCTTGGCGGAATGA

Protein sequence

MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKAIGAGFVVLSSNAMYPSTLLETKEEQLPSHTADPCFQHIRHFQIPVSIPMAALTSSMQTNLLSAHSLTPSSSSSSSTVSTFPTSFSLPTSTNSAVLKIHALSSHASAFFNSCNHCFRTIVIAPRKRHATRSFSIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIMQRKLRKIKEKDSDHGRHMKGFDRSKIREPAPIVVEDEEEEVSQEDGGEAIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGNAEKIETVTVEVAREASLAE

Homology

[Close]

BLAST of CmaCh16G000160 vs. ExPASy Swiss-Prot
Match: Q9XGN1 (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 6.6e-152
Identity = 264/344 (76.74%), Postives = 304/344 (88.37%), Query Frame = 0


Query: 1   MANAAP----RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVS 60
           M N+AP    RSE   TYDSP+PLYAMA SS  + S    +RIA+GSF+E   NR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SS 120
           FD DS++++  P+LSF+HPYPPTKLMF+P +L    +S D+LASSGD+LRLW++ +  S+
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRR-PSSGDLLASSGDFLRLWEINEDSST 120

Query: 121 IEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDK 180
           +EP+SVLNNSKTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDK
Sbjct: 121 VEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDK 180

Query: 181 EVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMA 240
           EV+DIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMA
Sbjct: 181 EVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 240

Query: 241 TILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPM 300
           TILMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP 
Sbjct: 241 TILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 300

Query: 301 VAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           VAGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+
Sbjct: 301 VAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLR 340

[Close]

BLAST of CmaCh16G000160 vs. ExPASy Swiss-Prot
Match: Q9LPV9 (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 7.9e-113
Identity = 204/336 (60.71%), Postives = 256/336 (76.19%), Query Frame = 0


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           RSE + TY++P  +YAM  S      R+   R+A+ S +EQ  NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWHIYAMNWSV----RRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  HPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLSVLNNS 126
            P+LSF+HPYPPTK +F P+         D+LA+S D+LRLW++ D  S +E  S LN++
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKEC---QRPDLLATSSDFLRLWRIADDHSRVELKSCLNSN 137

Query: 127 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 186
           K SEFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG  
Sbjct: 138 KNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGV 197

Query: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVV 246
            VFASVSADGSVR+FDLRDKEHSTIIYES +PD+PL+RL WNKQD RYMATI+MDS KVV
Sbjct: 198 GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVV 257

Query: 247 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGID 306
           +LDIR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+D
Sbjct: 258 VLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLD 317

Query: 307 PMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           P+  Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+
Sbjct: 318 PILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 345

[Close]

BLAST of CmaCh16G000160 vs. ExPASy Swiss-Prot
Match: Q38960 (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.3e-110
Identity = 200/336 (59.52%), Postives = 253/336 (75.30%), Query Frame = 0


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           RSE + TY++P  +YAM  S      R+   R+A+ S IEQ  NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWQIYAMNWSI----RRDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRS 77

Query: 67  HPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLSVLNNS 126
            P+L F+HPYPPTK  F P+         D+LA+S D+LRLW++ D  S +E  S L++ 
Sbjct: 78  DPNLCFEHPYPPTKTSFIPDKEC---QRPDLLATSSDFLRLWRISDDESRVELKSCLSSD 137

Query: 127 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 186
           K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG  
Sbjct: 138 KNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGV 197

Query: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVV 246
            VFASVS DGSVR+FDLRDKEHSTIIYES +P +PL+RL+WNKQD RYMAT++M S K+V
Sbjct: 198 GVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIV 257

Query: 247 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGID 306
           +LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +      G+D
Sbjct: 258 VLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGGLD 317

Query: 307 PMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           P+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+
Sbjct: 318 PILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILR 345

[Close]

BLAST of CmaCh16G000160 vs. ExPASy Swiss-Prot
Match: Q552R1 (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr68 PE=3 SV=2)

HSP 1 Score: 348.2 bits (892), Expect = 2.2e-94
Identity = 186/329 (56.53%), Postives = 235/329 (71.43%), Query Frame = 0


Query: 13  TYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQTHPSLSF 72
           TY+SP  +Y ++ SS      N P R+A+GSF+E  TNRVD++  + +  + Q      F
Sbjct: 8   TYNSPWVIYGLSWSS----RVNRPFRLAIGSFLEDYTNRVDVIQLNEE--TDQFEVVCGF 67

Query: 73  DHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDS--SIEPLSVLNNSKTSEFC 132
           +HPYPPTK M+ P+  S   N  D+LA++GDYLRLW+VG +  SI+  S+L N   SEFC
Sbjct: 68  EHPYPPTKCMWIPDKNS---NRPDLLATTGDYLRLWEVGSNQRSIKLKSLLTN-VISEFC 127

Query: 133 APLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEAR-VFAS 192
           APL+SFDWNE +P  + TSSIDTTCTIW+IE    +TQ IAHDKEV+DIA+     +FAS
Sbjct: 128 APLSSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFAS 187

Query: 193 VSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVVILDIR 252
           V ADGS+R+FDLR+ EHSTIIYE+P    PLLRL WNKQD  Y+ATI  DS KV+ILDIR
Sbjct: 188 VGADGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIR 247

Query: 253 SPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSA 312
            PSVP AEL  H S+VN I+WAP S  HIC+  DDKQALIW+L  +  P   DP+  Y+A
Sbjct: 248 VPSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE-DPLLTYNA 307

Query: 313 AHEINQLQWSAAQPDWIALAFSNKMQLLK 339
             EINQL WS++QPDWIA+AFS+ +Q+LK
Sbjct: 308 LAEINQLSWSSSQPDWIAIAFSSHLQILK 324

[Close]

BLAST of CmaCh16G000160 vs. ExPASy Swiss-Prot
Match: P61962 (DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.6e-89
Identity = 178/341 (52.20%), Postives = 228/341 (66.86%), Query Frame = 0


Query: 14  YDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQTHPSLSFD 73
           Y++P  +YAM  S      + F  R+ALGSF+E+  N+V +V  D +S         +FD
Sbjct: 13  YEAPWTVYAMNWSV--RPDKRF--RLALGSFVEEYNNKVQLVGLDEESSEFICRN--TFD 72

Query: 74  HPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSVLNNSKTSEFCAPL 133
           HPYP TKLM+ P+         D+LA+SGDYLR+W+VG++      +LNN+K S+FCAPL
Sbjct: 73  HPYPTTKLMWIPDTKGVY---PDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPL 132

Query: 134 TSFDWNEVEPKRIGTSSIDTTCTIWDIE-----------KSVVETQFIAHDKEVYDIAWG 193
           TSFDWNEV+P  +GTSSIDTTCTIW +E              V+TQ IAHDKEVYDIA+ 
Sbjct: 133 TSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFS 192

Query: 194 EA----RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILM 253
            A     +FASV ADGSVR+FDLR  EHSTIIYE PQ   PLLRL WNKQD  Y+AT+ M
Sbjct: 193 RAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATMAM 252

Query: 254 DSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGP 313
           D  +VVILD+R P  PVA L  H + VN IAWAP S  HIC+A DD QALIW++  +  P
Sbjct: 253 DGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQM--P 312

Query: 314 NGI-DPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
             I DP+  Y+A  EIN +QW++ QPDWIA+ ++N +++L+
Sbjct: 313 RAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILR 341

[Close]

BLAST of CmaCh16G000160 vs. ExPASy TrEMBL
Match: A0A6J1J1Z4 (protein TRANSPARENT TESTA GLABRA 1 OS=Cucurbita maxima OX=3661 GN=LOC111482686 PE=4 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 1.1e-194
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60
           MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD
Sbjct: 26  MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 85

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV
Sbjct: 86  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 145

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 146 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 205

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS
Sbjct: 206 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 265

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 266 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 325

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK
Sbjct: 326 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 363

[Close]

BLAST of CmaCh16G000160 vs. ExPASy TrEMBL
Match: A0A6J1E766 (protein TRANSPARENT TESTA GLABRA 1 OS=Cucurbita moschata OX=3662 GN=LOC111430561 PE=4 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 1.8e-192
Identity = 334/338 (98.82%), Postives = 336/338 (99.41%), Query Frame = 0


Query: 1   MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60
           M NAAPRSEFMATYDSPHPLYAMAISSAHTHSR FPNRIALGSFIEQCTNRVDIVSFDPD
Sbjct: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           SLSIQTHPSLSFDHPYPPTKLMFNP+ALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV
Sbjct: 61  SLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK
Sbjct: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 338

[Close]

BLAST of CmaCh16G000160 vs. ExPASy TrEMBL
Match: A0A5D3BFF9 (Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00330 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 1.4e-173
Identity = 306/338 (90.53%), Postives = 320/338 (94.67%), Query Frame = 0


Query: 1   MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60
           M NAA RSEF+ATYDSPHPLYAMAISS H HS NF +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 89  MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 148

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           S+SI+T+PSLSF+HPYPPTKLMFNP+ LSSL      LASSGD LRLW+VGDSSIEPLS+
Sbjct: 149 SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKVGDSSIEPLSL 208

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 209 LNNSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 268

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDS
Sbjct: 269 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 328

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 329 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 388

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLK
Sbjct: 389 IDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLK 420

[Close]

BLAST of CmaCh16G000160 vs. ExPASy TrEMBL
Match: A0A5A7TV10 (Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001300 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 1.4e-173
Identity = 306/338 (90.53%), Postives = 320/338 (94.67%), Query Frame = 0


Query: 1   MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60
           M NAA RSEF+ATYDSPHPLYAMAISS H HS NF +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 89  MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 148

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           S+SI+T+PSLSF+HPYPPTKLMFNP+ LSSL      LASSGD LRLW+VGDSSIEPLS+
Sbjct: 149 SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKVGDSSIEPLSL 208

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 209 LNNSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 268

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDS
Sbjct: 269 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 328

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 329 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 388

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLK
Sbjct: 389 IDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLK 420

[Close]

BLAST of CmaCh16G000160 vs. ExPASy TrEMBL
Match: A0A1S3C1G5 (protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo OX=3656 GN=LOC103495746 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 1.4e-173
Identity = 306/338 (90.53%), Postives = 320/338 (94.67%), Query Frame = 0


Query: 1   MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60
           M NAA RSEF+ATYDSPHPLYAMAISS H HS NF +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           S+SI+T+PSLSF+HPYPPTKLMFNP+ LSSL      LASSGD LRLW+VGDSSIEPLS+
Sbjct: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKVGDSSIEPLSL 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLK
Sbjct: 301 IDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLK 332

[Close]

BLAST of CmaCh16G000160 vs. NCBI nr
Match: XP_022984362.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucurbita maxima])

HSP 1 Score: 689.9 bits (1779), Expect = 2.3e-194
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60
           MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD
Sbjct: 26  MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 85

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV
Sbjct: 86  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 145

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 146 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 205

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS
Sbjct: 206 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 265

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 266 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 325

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK
Sbjct: 326 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 363

[Close]

BLAST of CmaCh16G000160 vs. NCBI nr
Match: XP_023551826.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 686.8 bits (1771), Expect = 2.0e-193
Identity = 336/338 (99.41%), Postives = 337/338 (99.70%), Query Frame = 0


Query: 1   MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60
           M NAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD
Sbjct: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV
Sbjct: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK
Sbjct: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 338

[Close]

BLAST of CmaCh16G000160 vs. NCBI nr
Match: KAG6576622.1 (Protein TRANSPARENT TESTA GLABRA 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014675.1 Protein TRANSPARENT TESTA GLABRA 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 684.5 bits (1765), Expect = 9.7e-193
Identity = 335/338 (99.11%), Postives = 336/338 (99.41%), Query Frame = 0


Query: 1   MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60
           M NAAPRSEFMATYDSPHPLYAMAISSAHTHSR FPNRIALGSFIEQCTNRVDIVSFDPD
Sbjct: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV
Sbjct: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK
Sbjct: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 338

[Close]

BLAST of CmaCh16G000160 vs. NCBI nr
Match: XP_022922603.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucurbita moschata])

HSP 1 Score: 682.6 bits (1760), Expect = 3.7e-192
Identity = 334/338 (98.82%), Postives = 336/338 (99.41%), Query Frame = 0


Query: 1   MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60
           M NAAPRSEFMATYDSPHPLYAMAISSAHTHSR FPNRIALGSFIEQCTNRVDIVSFDPD
Sbjct: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           SLSIQTHPSLSFDHPYPPTKLMFNP+ALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV
Sbjct: 61  SLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK
Sbjct: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 338

[Close]

BLAST of CmaCh16G000160 vs. NCBI nr
Match: XP_038906093.1 (protein TRANSPARENT TESTA GLABRA 1 [Benincasa hispida])

HSP 1 Score: 633.6 bits (1633), Expect = 2.0e-177
Identity = 311/338 (92.01%), Postives = 321/338 (94.97%), Query Frame = 0


Query: 1   MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60
           M NA  RSEF+ TYDSPHPLYAMAISS H+HS NFPNRIALGSFIE+ TNRVDIVSFDPD
Sbjct: 1   MQNADSRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFIEEYTNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           SLSI+ HPSLSF+HPYPPTKLMFNP+ LSSL      LASSGDYLRLW+VGDSSIEPLS+
Sbjct: 61  SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDYLRLWKVGDSSIEPLSL 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           IDPMSMYSA HEINQLQWSAAQPDWIALAFS KMQLLK
Sbjct: 301 IDPMSMYSATHEINQLQWSAAQPDWIALAFSKKMQLLK 332

[Close]

BLAST of CmaCh16G000160 vs. TAIR 10
Match: AT5G24520.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 539.3 bits (1388), Expect = 4.7e-153
Identity = 264/344 (76.74%), Postives = 304/344 (88.37%), Query Frame = 0


Query: 1   MANAAP----RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVS 60
           M N+AP    RSE   TYDSP+PLYAMA SS  + S    +RIA+GSF+E   NR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SS 120
           FD DS++++  P+LSF+HPYPPTKLMF+P +L    +S D+LASSGD+LRLW++ +  S+
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRR-PSSGDLLASSGDFLRLWEINEDSST 120

Query: 121 IEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDK 180
           +EP+SVLNNSKTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDK
Sbjct: 121 VEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDK 180

Query: 181 EVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMA 240
           EV+DIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMA
Sbjct: 181 EVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 240

Query: 241 TILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPM 300
           TILMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP 
Sbjct: 241 TILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 300

Query: 301 VAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           VAGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+
Sbjct: 301 VAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLR 340

[Close]

BLAST of CmaCh16G000160 vs. TAIR 10
Match: AT5G24520.3 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 539.3 bits (1388), Expect = 4.7e-153
Identity = 264/344 (76.74%), Postives = 304/344 (88.37%), Query Frame = 0


Query: 1   MANAAP----RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVS 60
           M N+AP    RSE   TYDSP+PLYAMA SS  + S    +RIA+GSF+E   NR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SS 120
           FD DS++++  P+LSF+HPYPPTKLMF+P +L    +S D+LASSGD+LRLW++ +  S+
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRR-PSSGDLLASSGDFLRLWEINEDSST 120

Query: 121 IEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDK 180
           +EP+SVLNNSKTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDK
Sbjct: 121 VEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDK 180

Query: 181 EVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMA 240
           EV+DIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMA
Sbjct: 181 EVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 240

Query: 241 TILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPM 300
           TILMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP 
Sbjct: 241 TILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 300

Query: 301 VAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           VAGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+
Sbjct: 301 VAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLR 340

[Close]

BLAST of CmaCh16G000160 vs. TAIR 10
Match: AT5G24520.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 539.3 bits (1388), Expect = 4.7e-153
Identity = 264/344 (76.74%), Postives = 304/344 (88.37%), Query Frame = 0


Query: 1   MANAAP----RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVS 60
           M N+AP    RSE   TYDSP+PLYAMA SS  + S    +RIA+GSF+E   NR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SS 120
           FD DS++++  P+LSF+HPYPPTKLMF+P +L    +S D+LASSGD+LRLW++ +  S+
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRR-PSSGDLLASSGDFLRLWEINEDSST 120

Query: 121 IEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDK 180
           +EP+SVLNNSKTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDK
Sbjct: 121 VEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDK 180

Query: 181 EVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMA 240
           EV+DIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMA
Sbjct: 181 EVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 240

Query: 241 TILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPM 300
           TILMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP 
Sbjct: 241 TILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 300

Query: 301 VAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           VAGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+
Sbjct: 301 VAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLR 340

[Close]

BLAST of CmaCh16G000160 vs. TAIR 10
Match: AT1G12910.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 409.5 bits (1051), Expect = 5.6e-114
Identity = 204/336 (60.71%), Postives = 256/336 (76.19%), Query Frame = 0


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           RSE + TY++P  +YAM  S      R+   R+A+ S +EQ  NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWHIYAMNWSV----RRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  HPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLSVLNNS 126
            P+LSF+HPYPPTK +F P+         D+LA+S D+LRLW++ D  S +E  S LN++
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKEC---QRPDLLATSSDFLRLWRIADDHSRVELKSCLNSN 137

Query: 127 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 186
           K SEFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG  
Sbjct: 138 KNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGV 197

Query: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVV 246
            VFASVSADGSVR+FDLRDKEHSTIIYES +PD+PL+RL WNKQD RYMATI+MDS KVV
Sbjct: 198 GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVV 257

Query: 247 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGID 306
           +LDIR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+D
Sbjct: 258 VLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLD 317

Query: 307 PMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           P+  Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+
Sbjct: 318 PILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 345

[Close]

BLAST of CmaCh16G000160 vs. TAIR 10
Match: AT3G26640.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 402.1 bits (1032), Expect = 9.0e-112
Identity = 200/336 (59.52%), Postives = 253/336 (75.30%), Query Frame = 0


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           RSE + TY++P  +YAM  S      R+   R+A+ S IEQ  NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWQIYAMNWSI----RRDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRS 77

Query: 67  HPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLSVLNNS 126
            P+L F+HPYPPTK  F P+         D+LA+S D+LRLW++ D  S +E  S L++ 
Sbjct: 78  DPNLCFEHPYPPTKTSFIPDKEC---QRPDLLATSSDFLRLWRISDDESRVELKSCLSSD 137

Query: 127 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 186
           K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG  
Sbjct: 138 KNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGV 197

Query: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVV 246
            VFASVS DGSVR+FDLRDKEHSTIIYES +P +PL+RL+WNKQD RYMAT++M S K+V
Sbjct: 198 GVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIV 257

Query: 247 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGID 306
           +LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +      G+D
Sbjct: 258 VLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGGLD 317

Query: 307 PMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           P+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+
Sbjct: 318 PILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILR 345

The following BLAST results are available for this feature:

BLAST of CmaCh16G000160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XGN1	6.6e-152	76.74	Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 ...	[more]
Q9LPV9	7.9e-113	60.71	WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 S...	[more]
Q38960	1.3e-110	59.52	WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 S...	[more]
Q552R1	2.2e-94	56.53	DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 ...	[more]
P61962	1.6e-89	52.20	DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1	[more]

BLAST of CmaCh16G000160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J1Z4	1.1e-194	100.00	protein TRANSPARENT TESTA GLABRA 1 OS=Cucurbita maxima OX=3661 GN=LOC111482686 P...	[more]
A0A6J1E766	1.8e-192	98.82	protein TRANSPARENT TESTA GLABRA 1 OS=Cucurbita moschata OX=3662 GN=LOC111430561...	[more]
A0A5D3BFF9	1.4e-173	90.53	Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7TV10	1.4e-173	90.53	Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3C1G5	1.4e-173	90.53	protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo OX=3656 GN=LOC103495746 PE=4 ...	[more]

BLAST of CmaCh16G000160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022984362.1	2.3e-194	100.00	protein TRANSPARENT TESTA GLABRA 1 [Cucurbita maxima]	[more]
XP_023551826.1	2.0e-193	99.41	protein TRANSPARENT TESTA GLABRA 1 [Cucurbita pepo subsp. pepo]	[more]
KAG6576622.1	9.7e-193	99.11	Protein TRANSPARENT TESTA GLABRA 1, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022922603.1	3.7e-192	98.82	protein TRANSPARENT TESTA GLABRA 1 [Cucurbita moschata]	[more]
XP_038906093.1	2.0e-177	92.01	protein TRANSPARENT TESTA GLABRA 1 [Benincasa hispida]	[more]

BLAST of CmaCh16G000160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24520.1	4.7e-153	76.74	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.3	4.7e-153	76.74	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.2	4.7e-153	76.74	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G12910.1	5.6e-114	60.71	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G26640.1	9.0e-112	59.52	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 114..159 e-value: 0.79 score: 17.7 coord: 251..291 e-value: 1.2E-5 score: 34.8 coord: 162..200 e-value: 1.4E-4 score: 31.3 coord: 65..109 e-value: 20.0 score: 8.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 255..290 e-value: 0.065 score: 14.1 coord: 169..200 e-value: 0.24 score: 12.3
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 258..292 score: 9.739832
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 169..209 score: 9.439068
IPR003489	Ribosome hibernation promoting factor/RaiA	TIGRFAM	TIGR00741	TIGR00741	coord: 484..587 e-value: 2.9E-18 score: 64.2
IPR003489	Ribosome hibernation promoting factor/RaiA	PFAM	PF02482	Ribosomal_S30AE	coord: 486..582 e-value: 4.4E-22 score: 78.6
IPR003489	Ribosome hibernation promoting factor/RaiA	CDD	cd00552	RaiA	coord: 484..582 e-value: 3.00689E-26 score: 101.052
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 46..338 e-value: 1.3E-37 score: 131.8
IPR038416	Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily	GENE3D	3.30.505.50		coord: 635..687 e-value: 6.3E-21 score: 75.7
IPR036567	Ribosome hibernation promotion factor-like	GENE3D	3.30.160.100		coord: 484..587 e-value: 1.1E-21 score: 78.9
IPR036567	Ribosome hibernation promotion factor-like	SUPERFAMILY	69754	Ribosome binding protein Y (YfiA homologue)	coord: 484..589
IPR032528	Sigma 54 modulation/S30EA ribosomal protein, C-terminal	PFAM	PF16321	Ribosom_S30AE_C	coord: 623..676 e-value: 1.2E-25 score: 88.9
IPR031104	Protein TRANSPARENT TESTA GLABRA 1	PANTHER	PTHR19919:SF10	PROTEIN TRANSPARENT TESTA GLABRA 1	coord: 6..338
None	No IPR available	PANTHER	PTHR19919	WD REPEAT CONTAINING PROTEIN	coord: 6..338
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 278..292
IPR034694	Ribosome hibernation promoting factor, long/plastid	HAMAP	MF_00839	HPF	coord: 483..680 score: 20.434986
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 38..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G000160.1	CmaCh16G000160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006417	regulation of translation
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding