CmaCh15G013410 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G013410
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ethylene-responsive transcription factor RAP2-11-like
Location	Cma_Chr15: 8410675 .. 8411308 (-)
RNA-Seq Expression	CmaCh15G013410
Synteny	CmaCh15G013410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCCATTTTCTTTGTCCTCATTCCATTCACTCACAATTATAAACCAAATTAAAGCTCCACATTTGAGGCCCCCCCATGGCCATGAGAACCTGCACAAAGAAGCCATCATCAAGAGGCCACCATCGCTATGTAGGCGTTCGCCAGAGGCCCTCCGGCAGATGGGTCTCTGAGATCAAGGACTCCCTGCACAAGGTCAGGCTATGGCTTGGGACTTTCGACACCGCCGAGGACGCAGCTCGGGCTTATGACGATGCGGCACGAGCTCTCCGTGGCTCCAATGCTCGCACCAACTTCGCCTACTTGCCTCCAACCTCTTCTGAGTCAAGTATAGGTAAATAACAAATTCTTTTGAACTTCGATCTTATATAAAGGAAAACAATAAATGAAAATATATTAATTTAGTGGATGCAGGCGATGCTAGCCAGCCCATGGAGCCACCCTTTTCTTTCGAGGAGGGTTGCATGGAAAAAGACGACGGTCTCCTGGGGGCCCTAAGGGCGAAGCTGTTCGACGGCAAGGGGCGTCGGGTGCTGCAGGCTGTGGCTCAAACATCTTGCAGCTTTGAAGACGTATTTTGTAGTTTAAATGGTTTTGTTTGCGGAGGAACCAATAATTTAGAAGAACAAGAATAA

mRNA sequence

ATCTCCATTTTCTTTGTCCTCATTCCATTCACTCACAATTATAAACCAAATTAAAGCTCCACATTTGAGGCCCCCCCATGGCCATGAGAACCTGCACAAAGAAGCCATCATCAAGAGGCCACCATCGCTATGTAGGCGTTCGCCAGAGGCCCTCCGGCAGATGGGTCTCTGAGATCAAGGACTCCCTGCACAAGGTCAGGCTATGGCTTGGGACTTTCGACACCGCCGAGGACGCAGCTCGGGCTTATGACGATGCGGCACGAGCTCTCCGTGGCTCCAATGCTCGCACCAACTTCGCCTACTTGCCTCCAACCTCTTCTGAGTCAAGTATAGTGGATGCAGGCGATGCTAGCCAGCCCATGGAGCCACCCTTTTCTTTCGAGGAGGGTTGCATGGAAAAAGACGACGGTCTCCTGGGGGCCCTAAGGGCGAAGCTGTTCGACGGCAAGGGGCGTCGGGTGCTGCAGGCTGTGGCTCAAACATCTTGCAGCTTTGAAGACGTATTTTGTAGTTTAAATGGTTTTGTTTGCGGAGGAACCAATAATTTAGAAGAACAAGAATAA

Coding sequence (CDS)

ATGGCCATGAGAACCTGCACAAAGAAGCCATCATCAAGAGGCCACCATCGCTATGTAGGCGTTCGCCAGAGGCCCTCCGGCAGATGGGTCTCTGAGATCAAGGACTCCCTGCACAAGGTCAGGCTATGGCTTGGGACTTTCGACACCGCCGAGGACGCAGCTCGGGCTTATGACGATGCGGCACGAGCTCTCCGTGGCTCCAATGCTCGCACCAACTTCGCCTACTTGCCTCCAACCTCTTCTGAGTCAAGTATAGTGGATGCAGGCGATGCTAGCCAGCCCATGGAGCCACCCTTTTCTTTCGAGGAGGGTTGCATGGAAAAAGACGACGGTCTCCTGGGGGCCCTAAGGGCGAAGCTGTTCGACGGCAAGGGGCGTCGGGTGCTGCAGGCTGTGGCTCAAACATCTTGCAGCTTTGAAGACGTATTTTGTAGTTTAAATGGTTTTGTTTGCGGAGGAACCAATAATTTAGAAGAACAAGAATAA

Protein sequence

MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAARALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKLFDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE

Homology

[Close]

BLAST of CmaCh15G013410 vs. ExPASy Swiss-Prot
Match: Q6J9S1 (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702 GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.6e-21
Identity = 49/79 (62.03%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 7  TKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAARALRG 66
          TK+ S     ++VGVRQRPSG+WV+EIKD+  K+R+WLGTF+TAE+AARAYD+AA  LRG
Sbjct: 11 TKEKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRG 70

Query: 67 SNARTNFAYLPPTSSESSI 86
          SN RTNFA   P +S+ S+
Sbjct: 71 SNTRTNFANHFPNNSQLSL 89

[Close]

BLAST of CmaCh15G013410 vs. ExPASy Swiss-Prot
Match: A2Q5W1 (Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.9e-20
Identity = 44/63 (69.84%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 11 SSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAARALRGSNAR 70
          +S   +++VGVRQRPSGRWV+EIKD+  K+R+WLGTF+TAE+AARAYD+AA  LRGSN R
Sbjct: 32 NSNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTR 91

Query: 71 TNF 74
          TNF
Sbjct: 92 TNF 94

[Close]

BLAST of CmaCh15G013410 vs. ExPASy Swiss-Prot
Match: A0A1X9PY88 (Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-19
Identity = 43/58 (74.14%), Postives = 53/58 (91.38%), Query Frame = 0


Query: 16 HRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAARALRGSNARTNF 74
          +++VGVRQRPSGRWV+EIKD+  K+R+WLGTF+TAE+AARAYD+AA  LRGSN RTNF
Sbjct: 33 NKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF 90

[Close]

BLAST of CmaCh15G013410 vs. ExPASy Swiss-Prot
Match: Q9M644 (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=LEP PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-19
Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 8   KKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAARALRGS 67
           KK   +   R++GVR+RP GR+ +EI+D   K R WLGTFDTAE+AA AYD AAR++RG+
Sbjct: 10  KKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAARSMRGT 69

Query: 68  NARTNFAY--LPPTSSESSIVDAGDASQPMEPP 99
            ARTNF Y  +PP+SS +SIV   D   P  PP
Sbjct: 70  RARTNFVYSDMPPSSSVTSIVSPDDPPPPPPPP 102

[Close]

BLAST of CmaCh15G013410 vs. ExPASy Swiss-Prot
Match: A9Y0K8 (Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=ERN2 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 2.4e-17
Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 0


Query: 8  KKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAARALRGS 67
          +   S    ++VGVRQRPSGR+V+EIKD+   +R+WLGTF+TAE+AARAYD+AA  LRGS
Sbjct: 23 RNKKSETRDKFVGVRQRPSGRYVAEIKDTTQNIRMWLGTFETAEEAARAYDEAATLLRGS 82

Query: 68 NARTNF 74
            RTNF
Sbjct: 83 KTRTNF 88

[Close]

BLAST of CmaCh15G013410 vs. ExPASy TrEMBL
Match: A0A6J1HZQ1 (ethylene-responsive transcription factor LEP-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469103 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.3e-87
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA 60
           MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA
Sbjct: 1   MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA 60

Query: 61  ARALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKL 120
           ARALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKL
Sbjct: 61  ARALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKL 120

Query: 121 FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 162
           FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE
Sbjct: 121 FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 161

[Close]

BLAST of CmaCh15G013410 vs. ExPASy TrEMBL
Match: A0A6J1HY79 (ethylene-responsive transcription factor RAP2-11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469103 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.3e-84
Identity = 158/161 (98.14%), Postives = 158/161 (98.14%), Query Frame = 0


Query: 1   MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA 60
           MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA
Sbjct: 1   MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA 60

Query: 61  ARALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKL 120
           ARALRGSNARTNFAYLPPTSSESSI   GDASQPMEPPFSFEEGCMEKDDGLLGALRAKL
Sbjct: 61  ARALRGSNARTNFAYLPPTSSESSI---GDASQPMEPPFSFEEGCMEKDDGLLGALRAKL 120

Query: 121 FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 162
           FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE
Sbjct: 121 FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 158

[Close]

BLAST of CmaCh15G013410 vs. ExPASy TrEMBL
Match: A0A6J1I2X2 (ethylene-responsive transcription factor RAP2-11-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111469103 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82
Identity = 156/161 (96.89%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA 60
           MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA
Sbjct: 1   MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA 60

Query: 61  ARALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKL 120
           ARALRGSNARTNFAYLPPTSSESS     DASQPMEPPFSFEEGCMEKDDGLLGALRAKL
Sbjct: 61  ARALRGSNARTNFAYLPPTSSESS-----DASQPMEPPFSFEEGCMEKDDGLLGALRAKL 120

Query: 121 FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 162
           FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE
Sbjct: 121 FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 156

[Close]

BLAST of CmaCh15G013410 vs. ExPASy TrEMBL
Match: A0A6J1EQN1 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3662 GN=LOC111435710 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 149/159 (93.71%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 3   MRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAAR 62
           MRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAAR
Sbjct: 1   MRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAAR 60

Query: 63  ALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKLFD 122
           ALRGSNARTNFAY PPTSSESS     DASQPMEPPFSFEEGCME+DDGLLGALRAKLFD
Sbjct: 61  ALRGSNARTNFAYFPPTSSESS-----DASQPMEPPFSFEEGCMEEDDGLLGALRAKLFD 120

Query: 123 GKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 162
           GKGRRVLQAVAQTSCSFEDV+CSLNG  CGGTNNLEEQE
Sbjct: 121 GKGRRVLQAVAQTSCSFEDVYCSLNGIGCGGTNNLEEQE 154

[Close]

BLAST of CmaCh15G013410 vs. ExPASy TrEMBL
Match: A0A5A7TLM2 (Ethylene-responsive transcription factor ERF096-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001280 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.3e-57
Identity = 120/161 (74.53%), Postives = 132/161 (81.99%), Query Frame = 0


Query: 1   MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA 60
           MAM +C KK SSRGHHRYVGVRQRPSGRWVSEIKDSL KVRLWLGTFDTAE+AARAYDDA
Sbjct: 1   MAMGSCRKKASSRGHHRYVGVRQRPSGRWVSEIKDSLQKVRLWLGTFDTAEEAARAYDDA 60

Query: 61  ARALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKL 120
           ARALRGSNARTNF YLPP+S +S   DAGDA+QP+E PFSFEEGC+E +DGLLGAL+AKL
Sbjct: 61  ARALRGSNARTNFEYLPPSSCDSG-ADAGDANQPIESPFSFEEGCIE-EDGLLGALKAKL 120

Query: 121 FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 162
           FDGKG+RVLQAVAQT+C      CS    +    NN    E
Sbjct: 121 FDGKGQRVLQAVAQTTC------CSTTDNLINTNNNSNYNE 153

[Close]

BLAST of CmaCh15G013410 vs. NCBI nr
Match: XP_022970111.1 (ethylene-responsive transcription factor LEP-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 331.3 bits (848), Expect = 4.8e-87
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA 60
           MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA
Sbjct: 1   MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA 60

Query: 61  ARALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKL 120
           ARALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKL
Sbjct: 61  ARALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKL 120

Query: 121 FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 162
           FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE
Sbjct: 121 FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 161

[Close]

BLAST of CmaCh15G013410 vs. NCBI nr
Match: XP_022970112.1 (ethylene-responsive transcription factor RAP2-11-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 320.1 bits (819), Expect = 1.1e-83
Identity = 158/161 (98.14%), Postives = 158/161 (98.14%), Query Frame = 0


Query: 1   MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA 60
           MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA
Sbjct: 1   MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA 60

Query: 61  ARALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKL 120
           ARALRGSNARTNFAYLPPTSSESSI   GDASQPMEPPFSFEEGCMEKDDGLLGALRAKL
Sbjct: 61  ARALRGSNARTNFAYLPPTSSESSI---GDASQPMEPPFSFEEGCMEKDDGLLGALRAKL 120

Query: 121 FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 162
           FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE
Sbjct: 121 FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 158

[Close]

BLAST of CmaCh15G013410 vs. NCBI nr
Match: XP_022970113.1 (ethylene-responsive transcription factor RAP2-11-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 315.5 bits (807), Expect = 2.7e-82
Identity = 156/161 (96.89%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA 60
           MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA
Sbjct: 1   MAMRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDA 60

Query: 61  ARALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKL 120
           ARALRGSNARTNFAYLPPTSSESS     DASQPMEPPFSFEEGCMEKDDGLLGALRAKL
Sbjct: 61  ARALRGSNARTNFAYLPPTSSESS-----DASQPMEPPFSFEEGCMEKDDGLLGALRAKL 120

Query: 121 FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 162
           FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE
Sbjct: 121 FDGKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 156

[Close]

BLAST of CmaCh15G013410 vs. NCBI nr
Match: XP_023520567.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.1 bits (780), Expect = 3.7e-79
Identity = 150/159 (94.34%), Postives = 152/159 (95.60%), Query Frame = 0


Query: 3   MRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAAR 62
           MRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAAR
Sbjct: 1   MRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAAR 60

Query: 63  ALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKLFD 122
           ALRGSNARTNFAY PPTSSESS     DASQPMEPPFSFEEGCME+DDGLLGALRAKLFD
Sbjct: 61  ALRGSNARTNFAYFPPTSSESS-----DASQPMEPPFSFEEGCMEEDDGLLGALRAKLFD 120

Query: 123 GKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 162
           GKGRRVLQAVAQTSCSFEDV+CSLNG VCGGTNNLEEQE
Sbjct: 121 GKGRRVLQAVAQTSCSFEDVYCSLNGIVCGGTNNLEEQE 154

[Close]

BLAST of CmaCh15G013410 vs. NCBI nr
Match: XP_022928968.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita moschata])

HSP 1 Score: 302.4 bits (773), Expect = 2.4e-78
Identity = 149/159 (93.71%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 3   MRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAAR 62
           MRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAAR
Sbjct: 1   MRTCTKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAAR 60

Query: 63  ALRGSNARTNFAYLPPTSSESSIVDAGDASQPMEPPFSFEEGCMEKDDGLLGALRAKLFD 122
           ALRGSNARTNFAY PPTSSESS     DASQPMEPPFSFEEGCME+DDGLLGALRAKLFD
Sbjct: 61  ALRGSNARTNFAYFPPTSSESS-----DASQPMEPPFSFEEGCMEEDDGLLGALRAKLFD 120

Query: 123 GKGRRVLQAVAQTSCSFEDVFCSLNGFVCGGTNNLEEQE 162
           GKGRRVLQAVAQTSCSFEDV+CSLNG  CGGTNNLEEQE
Sbjct: 121 GKGRRVLQAVAQTSCSFEDVYCSLNGIGCGGTNNLEEQE 154

[Close]

BLAST of CmaCh15G013410 vs. TAIR 10
Match: AT5G19790.1 (related to AP2 11 )

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22
Identity = 49/79 (62.03%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 7  TKKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAARALRG 66
          TK+ S     ++VGVRQRPSG+WV+EIKD+  K+R+WLGTF+TAE+AARAYD+AA  LRG
Sbjct: 11 TKEKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRG 70

Query: 67 SNARTNFAYLPPTSSESSI 86
          SN RTNFA   P +S+ S+
Sbjct: 71 SNTRTNFANHFPNNSQLSL 89

[Close]

BLAST of CmaCh15G013410 vs. TAIR 10
Match: AT5G13910.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.1e-20
Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 8   KKPSSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAARALRGS 67
           KK   +   R++GVR+RP GR+ +EI+D   K R WLGTFDTAE+AA AYD AAR++RG+
Sbjct: 10  KKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAARSMRGT 69

Query: 68  NARTNFAY--LPPTSSESSIVDAGDASQPMEPP 99
            ARTNF Y  +PP+SS +SIV   D   P  PP
Sbjct: 70  RARTNFVYSDMPPSSSVTSIVSPDDPPPPPPPP 102

[Close]

BLAST of CmaCh15G013410 vs. TAIR 10
Match: AT1G53170.1 (ethylene response factor 8 )

HSP 1 Score: 87.8 bits (216), Expect = 8.6e-18
Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 1   MAMRTCTKKPSSRGHH--------RYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAED 60
           M ++     P++  HH        RY GVR+RP GR+ +EI+D + K R+WLGTFDTA+ 
Sbjct: 6   MGLKPDPVAPTNPTHHESNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQ 65

Query: 61  AARAYDDAARALRGSNARTNFAYL---PPTSSESSIVDAGDASQPMEPPFSFEEGCMEKD 120
           AARAYD AAR  RG  A+TNF  +    PT S S++VD+  A++ + PP       +E  
Sbjct: 66  AARAYDAAARDFRGVKAKTNFGVIVGSSPTQS-STVVDSPTAARFITPPH------LELS 125

[Close]

BLAST of CmaCh15G013410 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 8.6e-18
Identity = 46/73 (63.01%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 12 SRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAARALRGSNART 71
          +R   R+ GVRQR  G WVSEI+  L K R+WLGTF+TAEDAARAYD+AAR + G  ART
Sbjct: 2  ARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRART 61

Query: 72 NFAYLP---PTSS 82
          NF Y P   PTSS
Sbjct: 62 NFPYNPNAIPTSS 74

[Close]

BLAST of CmaCh15G013410 vs. TAIR 10
Match: AT4G23750.1 (cytokinin response factor 2 )

HSP 1 Score: 85.5 bits (210), Expect = 4.3e-17
Identity = 39/72 (54.17%), Postives = 55/72 (76.39%), Query Frame = 0


Query: 11  SSRGHHRYVGVRQRPSGRWVSEIKDSLHKVRLWLGTFDTAEDAARAYDDAARALRGSNAR 70
           ++ G  ++ GVRQRP G+W +EI+D L +VRLWLGT++TAE+AA  YD+AA  LRG +A 
Sbjct: 115 TTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDAL 174

Query: 71  TNFAYLPPTSSE 83
           TNF+  P T++E
Sbjct: 175 TNFSVTPTTATE 186

The following BLAST results are available for this feature:

BLAST of CmaCh15G013410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6J9S1	3.6e-21	62.03	Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702...	[more]
A2Q5W1	8.9e-20	69.84	Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=...	[more]
A0A1X9PY88	1.5e-19	74.14	Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN...	[more]
Q9M644	1.5e-19	54.84	Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=...	[more]
A9Y0K8	2.4e-17	62.12	Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=...	[more]

BLAST of CmaCh15G013410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZQ1	2.3e-87	100.00	ethylene-responsive transcription factor LEP-like isoform X1 OS=Cucurbita maxima...	[more]
A0A6J1HY79	5.3e-84	98.14	ethylene-responsive transcription factor RAP2-11-like isoform X2 OS=Cucurbita ma...	[more]
A0A6J1I2X2	1.3e-82	96.89	ethylene-responsive transcription factor RAP2-11-like isoform X3 OS=Cucurbita ma...	[more]
A0A6J1EQN1	1.2e-78	93.71	ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3...	[more]
A0A5A7TLM2	3.3e-57	74.53	Ethylene-responsive transcription factor ERF096-like protein OS=Cucumis melo var...	[more]

BLAST of CmaCh15G013410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022970111.1	4.8e-87	100.00	ethylene-responsive transcription factor LEP-like isoform X1 [Cucurbita maxima]	[more]
XP_022970112.1	1.1e-83	98.14	ethylene-responsive transcription factor RAP2-11-like isoform X2 [Cucurbita maxi...	[more]
XP_022970113.1	2.7e-82	96.89	ethylene-responsive transcription factor RAP2-11-like isoform X3 [Cucurbita maxi...	[more]
XP_023520567.1	3.7e-79	94.34	ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pep...	[more]
XP_022928968.1	2.4e-78	93.71	ethylene-responsive transcription factor RAP2-11-like [Cucurbita moschata]	[more]

BLAST of CmaCh15G013410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19790.1	2.6e-22	62.03	related to AP2 11	[more]
AT5G13910.1	1.1e-20	54.84	Integrase-type DNA-binding superfamily protein	[more]
AT1G53170.1	8.6e-18	42.75	ethylene response factor 8	[more]
AT5G25190.1	8.6e-18	63.01	Integrase-type DNA-binding superfamily protein	[more]
AT4G23750.1	4.3e-17	54.17	cytokinin response factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 40..56 score: 70.48 coord: 18..29 score: 58.03
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 17..80 e-value: 1.7E-36 score: 137.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 17..66 e-value: 4.0E-13 score: 49.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 17..74 score: 20.481371
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 17..76 e-value: 6.73278E-19 score: 73.8451
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 16..75 e-value: 4.9E-24 score: 86.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31677:SF68	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP	coord: 7..135
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 7..135
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 17..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G013410.1	CmaCh15G013410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity