CmaCh15G013340 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh15G013340
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionMitochondrial import inner membrane translocase subunit
LocationCma_Chr15: 8365827 .. 8374693 (-)
RNA-Seq ExpressionCmaCh15G013340
SyntenyCmaCh15G013340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACCAAACGCGGCCCACAGCCGTCGCCTCAAATACAAAAGGGCTGTGGTTTATAGGGTTTTGCAAGCTCCGAACAAATGGATTCATTTTCATCGCCTTCAAGCGGTTCTTCTTCCCAATTTTCGCCCAACGAATTCAGGGACCAGCTCAAGACTCAGCTTGCTCAGGCGTACGCCGAGGAGTTTCTTGAGGTTCAAGTTCACTCTACTTGTTTCTTTTCTTCCAAATTTGTTGGTTGAGTCATCGATCTGTATGTGTATCTGGACCTCTTAGAGTAGTCGGTTTAATGAATGCGTTTCGCTATTGCGTGTTATGTGACGGTTGAAATTAGAGAAATCAATTAGTAATTTCTGGTTTTGATGTTTGGATAGCGATGCGATCTGGCTTTTAACGATGAGATGTAGGAATTAATCGATGCCAGTTTTTAGGCTGTCGATTTTAGATTTTGGATTTTGTAGTGTTCTAACGCAACATCAAACGGAATCGTTTGCGTTCTCTTTTCTCAGTTCTAGTTCGAACTTGTTTTTTATATTCTCATATTTTATTTTTTCTAATTGAAGATGTAGAAATATTAAGTCCATGTGTTCTAGAATTTCTTTTTCGATGAGTCATTCTTGGTGATTATTAGTTCACAAGAATCTTGTAGTTTTGTGCCTTAAACTTATTTTCGATGAGTCATTCTAGCTGATTTCATGTTGAGGTTAACATAAACGGGTAGAAGGGGGCTCTCTCTCTTGTTGTGATTCAGAGTTTCTTCAAGATTAACACACGAGGAAGAGTTAATGAAGGTGGAAGTGGATGATTATAAATAATTTCTCGAGGTTTTGAGAAACAGTCGTGGTTGAACCTTTCTTGCCCTCATCAAAAACTAGAGATGACCACCAGACACGGACTATAGACAAATAGGCCATTTTAGGATTTGATGGGACAATCGTAGGTCATTTATTCTTAGGAAATGCTTACAAAACAGCTGGAAACTTGAATGAACGTGGTTCCATATTATGGGGGTGGATGTAAAGGTTAGTTTGGTTAGGCACATTGCACATTGATGTCATTATACACAAATCATGATCTTGAAAGGAAAAATAATTTTACTTAGTCCTGGAAAGCTAGTTATCCATGAAAAGTCACATTCGGTCAAACACCAAAAACAGGATTCAGTAGTGAAAAAACAAGATAGAGCAAGACTTGAAAACAAGGGGAAAAAACTTATTTTTTTTAATTATATAAAGGCAACTATCCTACCTTACTTTTACTGAGCCCTCTCTTTCACCTCTGGATTCCCAAGATTTCTTCTAAAATTTGAATTTCAGCTACTATTTAAGCCCAACTAGCATTGATCTACCATAGGATCTTTGGACTTCGGCATGCTAAATATACTAGGGAAGGAAGGACATAAAGGTTCAATGTTCAGGCAATGATCCTTCCAAAACAGGGTTTTGTTACCTTTGCCCTCCTTTGTCTTGTACTACTTATTAAAAAAAATTGAATGCACTCCGAAATATGGGACTAAGAGCCCTTAAAATGATTGTGCTTTCAATTTCTCTTGCCACTTGTTTTTGGAAGCTATCATCTCTAACGGATTGATTTGGAAAAAAAAAAATATATATATAGACATTTAATCTTGTCGAAAATCACGCGATTTTCAGCAAGGTATTTATTCCCATTTAGGAGCGTACAAATATTGTGGTTTTATTGTGCAAGGTATTTATTCCCATTTAGGAGCGTACAAATATTGTGGTTTTATTGTGTAAATCTCCTGTGGACAAATGACGACGAAATTGCACAAAGTTGGCGCTGGAAATCTTGTCGGAAACGAATGGGAAAGAAACGAGGGTTTTCGACTGCACTTTCGGACGAAGAAGATGAAGAGTTGGGTCAGTCATTCAGACCCTACTCGTTTCGATTTAGCCCACAAGTTCTAAGCCCAGGCGAACCAGCAGCCCACGTTGTTTTAGCCTTCAACCCAGTGGCTCAACAGTCGCGACCCATACCCATCGCGCGTCTAAGCTGCAAGTTTGTTTACGTTGTCCAGCCCAAAGGAGGTCTAGTCCATTCAGTTTCGGCCCAACCTGACAGCCCGTGTTTTCCTTCAACGCCGCACGTGGCCAACACGTGATCAACTCTCAACCACGACTCCTTTCAATGCATCCTCGGCTCGACTTCAATGCATCCTTGGCTTGGCTTTATCGTTTTGCTCTGCTCAGGTTTATCGTTTTGCTCGGCTCAGTTTCTCGGCTTAGACGGCTCGGTATACTATAATATATCGATTTTTAGGTTTTCGATCATTATGAATCCATTTTTGACCTTATCTAAGTCATTTGAGGTTAGTAAGACTTTTTTTACAAGTTTAATTAGCTTAGGAGCTTATATTGGAATTAAGCATGATGTCCAGCTAAGTTAAGTTAATAGGCCCTAAGCATGTTATATGAATTTTCATAGGTAAGAGTTAGGTGTTAGATTGTAGTTTCGAGACGACTACCAAATTGTTAGAGACTTCAGCCAAGGCCAACCAAGTAAGTGACCTTACTATTGGAGTTAATCACAGGACCTCATGCATGTTTGTATGTCATATGCATCGGGATACTTCCCCATTATGTTATGTTAGTATGGATGCATACATTTGATATTTATGTATGCCATGATATCATGCAGACATTTTCTTTTTGTGGCATCTGGTGGAGTGTAATGCGATGTGTTCGACCAAGTCGAGCCCAGGGGTACGTATACGAGCCTGTTTGGTGGGCCCATGTGTGGAAAAATACCATACATCCAACCCTGCCCCGAATTTCATGTTTTGAATTGATTAGGCAAGTCCATACCCTTATTTTAAAGATGTTTATTATGAATTTCCGTAATTTATGATTTAAGATGTTTAGGTTAAGAAAATTAGGGAGTTACCGTTTGGTATTAGAGCCCTAGGTTTTAGATTTGGTAGAGCATACTTCCAGGGTTCTCCAACAAAAGTACCGTCACCGTTTGGTATGCTTTTAAAGGATAATAATTGTTTAGTTAAATGATGCATGCAATATGTTAATTTTACTATTTTAATTAAGGTATGATACAATTTATATGTTGTAAATGTTAGCATGATTTATGATGTGGCAAGATTAAATATGTTATATGACGTCACAAGATTAAATATGTTATGACAGGTATAATACGATGGTTATGATAATGTAAAGATTGTACGTACGTGTGACATGTATTTGTATGATTGTTTATTGAAGCCTATTAATTAAGTAAGTAACTTAGTAGTTACGTCTTTTGTATAGAGTATGCCACCTAGAACACGAGGTGGAGAAATTTGGGGACGACCCCCACCTATGGGTAGAAGAAGTGGTAGAAGAGGTCGAGGTTCGAAACGGGATAATTCTGTAAACTAGCCCGATGTAACTGTGCCACTCCCACCACCAGCGATACCTCAGGCCGCACCAAACCCTGTTGCTGCTCTAATAGAAGCATTGCAAGCTGTTGTGCAAATTATGATTACTACTCAACCGAGAAATGCTTCATCATCAACTAGACAAGCAAAGTGTTTGCGAGATTTCAAGAGGGTTGACCCTCAAACCTTTAATGGGTCTTCAGATGATCCAACCGTGGCACAATTATGGTTGAGATCTATAGAGATCGTGTTTGAGTTGATCAATTGCCCTGATGATCAAAAGGTGCGGTGTGTAACATTCATGTTGCGTGATGATGCAGAGTTATGGTGGCAGTCCACCAGCGAGATTATTAGTCTTGAGGGATGTGTAATCTCGTGGGCGGAATTCAAGGATGCCTTTATGGAAGAGTACTACTCTGAGGACATTCAATTTCGTATGCAGCAAAAGTTTACTCAAGTCAAAGGGGGCGTTCTGTTACCACATATGCTAGGGAGTTTATCAGAATGAAACATTTTGCCCCAGAGTTGGTGAACACTGACTACAGAACAACATGGTGGTTCGTACGTGGGTTGGACAAGAGGATCCGCCATATTGTTGAGACGTTATCACCTACTACCTATGTTGCTGCATTGAGAGCCGCTAAGGCCATAGAGGGAGTTGATGAATCTCCTGAACCCCCTCCATCGACAGTGAAACGAAAGCAATGTCATGACTAGGTTGATTGTCATGATCCATTGCCATTACAGCCACAACAACGACCTGACAGACAGTACCGTGATACTAGGCGTGGTCAGCAAAGAAATGGAAGCCGACCATATAATAGACCTCAGTGTAATGAGTGTGGGAAAAATCACTGGGGTCAATGTTTGGCCCATACCAGAGCCTGTTTTCAATGTGAAAAGGAGGGTCACAACTAAATATTGCCAAGGAGGTTGCGCGAATGATTTTGGAAACCAGCAGGGGAGACTAAGCATAGCGGATCCTACTCAAAACTGTCCTCCGACAAGAGCTTATGCCTCTACTGGCAAGGATATTGGGAATTTTGATGCGGTGGTGACAGGTACACTATTTGTTCTTGGTTACCTTTCTTTAACACTATTTGACTCGGGATCTACACATTCATTTATATATGTTTTCATTAAGCAAAATTTATATTAAAACGTAAAAATTTGTATCAAAACATTTGTTGCATGAATTCTCTGTTAGCACCTCGGCCAGGGTGGACTTGATTGCTGCTTATAGGGTAAAAGATAGTCTATGTGTTAGTATCAGGACTTAACCTAGAGGTAGATTTAATGGTAGTTCACATGACTGTATATGATGTTGTGGGAATGGATTGGTTAGTGGAAAATTATTCTATCCTAGACTTTTACAAGAAAGAACTGATATTTACGCCACCGTTCAAGACCAGTTTCAAATTCAATGGTATGAGTTTAGGAATTATGCCTGAAGTGATATCAATGATGAAAGCGAAGAAGTTGGTTCAGCACGAAGCGTGGGTCGTATTAGCTAGTGTCATGGATACCAAAAAGGAAGAAACTCCCTTAACCACAATGTCAGTTGCAAATAAATTACTTGATGTGTTCCTAGAGGATTTGTCAAGAATTCCTCCGTCACGAGATGTTAATTTTGGAATAGAGTTGGAACCAAGTATGAGTCCTATCTCTAAGGTCTCGTATTGTATGGCGCTAGTTGAATTGAAAGAATTCTAATACAACTAATAAAGGATTTATTAGACTCAGCGTTTCTCCTTGGGGTGCGCTGGTATTATTTGTCAAGAAAAAAGATGGTTCGATGCCCTTGTGCATCGATTACAGGGAGCTGAACAAAAGAACGGTGAAGAACAAGTATCTTCTTCCACGCATTTAGGACTTATTCGATCAGCTCAGGGAAGCAACAATGTTCTAAAAAATTGACAGTTAGGTTACCACTGGATCAAGATAAAAAATGAGGACATACCGAGACAACTTTCAGAACAAGCTATGGCCATATGAGTTCATGTTATGTCATTTGGACTCACTAATGCATCTGTAGTGTTCATGGAACTGATGAATTGAGTGTTTAAGAAATGTCTTGTTATTTTTGTCATAGTATTCATAGACTATATTTTGGTATACTCGAAGACAGATCAAGAACATCATATGCACTTGAGAAAGATCCTGACAATTCTGAGTGAAAACAAACTATATGTCAAGGTCTCGAAGTGTGAACTTTGGTTACGCGAAGTTTCATTTTTGGGCATGTGGTATCTAAGAAGGGTGTGTCAAGGTGGAAGCCGTTACCAAATGGACTTGTCCAACTACTGTCGTTGAGATACCTAGTTACTTAGGATTAGCTGGTTACTACCGACGTTTCATTCAAGACTTTTGCCAAAATAGCCGCCCCTTCTCGGGATAAATCTGGCTAAAGTTAATTTTCCATCTCTTGACAGGAATAAACTCTTCCAAAGGTCCAATTTCCTACACGCTTACACTTTCTCAACAATTGGTTCGTAGAAGGATTGCTTCCGATTCCCTCTGTTAAGGATATTTAGTAATAAATTATAGTTTACCATATATATTATATTTGATATTTTATTATAAGGCAAATATCTAATATTTGCCTTATTATCATATGTATCTTTCCATTTATTGTTATTTTCATTTATTACTATTTTCATATCCTTGTAATTCATTTGATTATAAATAAGATAACTTTCACACCATTTTGGTCATTTATTGTTATTTTCATTTATTACTATTTTCATATCCTTGTAATTCATTTGATTATAAATAAGATAACTTTCACACCATTTGGGTGTGGTGGATTAATCAAACATTCACATGGTATCAGAGCTCTCTCGGTTTAACAACCTCGATCCTTTCTTTTCAATGGCTTTTGAATCCTCTAATCTTCTTCTCCACCACCCCTGCTGGTTTTGACGCCGCAGGGGCAGTCTTCATGGCTGCCGTAGTCGGAGCCGATTGATTACTCTTCGGCTCCACCCTATTGACCTCCAAATCACCTTTCGTCATACTCTGTACATACAACCTCACATTTTCCAACCAAATCGGTTTTCCCCTTGGCCAATATAGTCTCTCTCATTTTCTTCCCAATCAACCTATCAATCTTTTGCAGAGATTTACCTTCAGAATCTGGGTGCTGCACTGGCCTATTCGCCAACCAAGTTGCCGCCGCCCTTCCTGCCAAAATTGGCTTCTTCGCCCGATGAGGCGACTCTTCCGACTGCCCTTCTCGCCAAAATTGGCTCCTTCGCCCAATGTGGCGACTCTTCCGACTTCAACATTGTCTTTGTCCCTTACTCTAGGTTTCCCCTTCTACTTCTTGGGGTTATAAATATTCTCACCAGAGCCAAGGCAGCATCGTCGCTAAGCGACAATCCCTCTTCATGGGTTAGACATATTCTCGCCGAAGCCAAGGCAGCATCCCTCTGCAATTTTTGATAGCCAAGAACCGGGTTGTTAGCATCTTCATGAAAAGTGTTTCTCAACCTCTTTGAATTTTTCAGATTCAAGCTTCACGTTCGTTTAAATCCGACGTTTAGCTTGCGGTGGGGTGTTAAGGATATTTAGTAATAAATTATAGTTTACCATATATATTATATTTGATATTTTTAGATATTTGCCTTATTATCATAGGTATCTTTCCATTTATTGTTATTTCCATTTATTACTATTTTCATATCTTTGTAATTCATTTGATTATAAATAAGATAACTTTCACACTATTTGGGTGTGGTGGATTAATCAAACATTCACACCCTCCCAAAGGCGAACCTAGTAGTAGAAAAGCTAGACGCCAGCCACATGCTCATTACTCAATCGTTGCAACCACCTCATGTTCGGAGATTTTTGAAAAAGCTATAACATAGGACTCTTTGAAAGGAAATGGAAGAATGGGATAACCTTTCAACACTAAACCAAAATCTTTCCGTGATCAAACTTCAGGGTTTTTCTCCACCTGAGTCTGCTTTGGTAGCTCTGCAAGCGTCGGTAATGAGTGCCTTTTGTAACTATTCACTAGGTCACATTTTGCGAGATTGGAAGCCTTTACTCTGGGGTGCACCCTTTTATAGGCTCTGTTTTTGTATTCTCTTGTATTCTTTCATTTGTTTTCTCAATGCAAGTTGGTTTTTTATAAAAAAAAAACATAGATGGAAGGGCTTCCAAATCAAGTGTTTGGATGCGTGCCTATCAGAAGGACGTTGGACCTATATTGACTTTGTATAACTGGTGTCTAACACGTCAATTGCACTAATAAATGTCCAATACGTGTTCAACAAGTGTCGAAGTGTTTTTCAGACATGGATACTCTAACGAACTAAAGTGTTCATGCTTGTTAGCCTAGAATGATAAATGGACAGATGGCCTCTGCAATATTCTTCACATTTTTACCATGTTCTTGAACCTTAAAGATTAATGTGAGGAAAGTTATGATTTGGGTATCTATATTTGTGATCCGAAGGTGTCACAACCAGGTATTAGACAAGCCACTGAAGGGGCTAATCGCCCTGCTGACTTAAGTACCCCATATGCCTCTTGGAGGAAGCCATTACAAAACTCATTGGGAACCTGCTGTATTTAGAGTGGAGAGGGGACTGCAAAAGTTGATATACACATTGGGGTTCTCTGTAGTTTGCACCTTGTGTGTTCTTTGTAATATCTTCTTGATAATAATTTTCTAGCTTAACAGTAATTAGTAGGTAATCCTTTTCTTTAAGTTGGAGGTTCAAATTCCCATATTCATGAGCCAGTCTCTGGGCTGTACCTATCTTTTTGCAGCCCACCTAGATGTCCGACTACACGTGACACGTGACAAACTCTTCTTTCTTATTCTTTTTCGAACTATTTTTGAATTTTTTTGCTGAAATATGATTTGAGTGAGCTGCAAAAAGATGGGTTGAGCTTAAGATAGACCTAAGTAATGCTCTTATATTTATTAATTATCTTCCCTCAATTTGGGCAAATTTGAGTTGCTAACTCGCACTTTCTCGCAGACCTTAAGAGTGAAGTGCTTTGACAAGTGCATCACAAAGCCAGGGTCAAGCCTAAGTGGGAGCGAGAGCAGTTGCATCTCCAGGTGCATGGAACGCTATATTGAGGCCACCGGCATCGTCAGTAGAGCCCTGTTTAAGACACCACACTGAAAAGAAAAGGTTTTGCTGAAACATTATGAGGTCCAGGTTTGATATTCCCCGTTCGATATTTGTTATTTAGTTCTTTAATCTCTCTCTACTAGATCACATGGGTCGTTAGTACAGATCCACTTGAACACTCTAATATCTTCCAAGACACGATCGACGTCAATGTCGATCATTATTATCGTTGAAATGTTTTTGTCATTCTCCTTTCTCTTTCTCGTCTTCTTTCTAATCAGTCCCACCGCTGATCAAAACACCCCAACAGCTTTGACAAACTCCCAAAACTGATCAGTGTGCATTGGTCGGTCTGTCGGTTCCATAATTATTCCCAAAATTAACAAA

mRNA sequence

CACCAAACGCGGCCCACAGCCGTCGCCTCAAATACAAAAGGGCTGTGGTTTATAGGGTTTTGCAAGCTCCGAACAAATGGATTCATTTTCATCGCCTTCAAGCGGTTCTTCTTCCCAATTTTCGCCCAACGAATTCAGGGACCAGCTCAAGACTCAGCTTGCTCAGGCGTACGCCGAGGAGTTTCTTGAGACCTTAAGAGTGAAGTGCTTTGACAAGTGCATCACAAAGCCAGGGTCAAGCCTAAGTGGGAGCGAGAGCAGTTGCATCTCCAGGTGCATGGAACGCTATATTGAGGCCACCGGCATCGTCAGTAGAGCCCTGTTTAAGACACCACACTGAAAAGAAAAGGTTTTGCTGAAACATTATGAGGTCCAGGTTTGATATTCCCCGTTCGATATTTGTTATTTAGTTCTTTAATCTCTCTCTACTAGATCACATGGGTCGTTAGTACAGATCCACTTGAACACTCTAATATCTTCCAAGACACGATCGACGTCAATGTCGATCATTATTATCGTTGAAATGTTTTTGTCATTCTCCTTTCTCTTTCTCGTCTTCTTTCTAATCAGTCCCACCGCTGATCAAAACACCCCAACAGCTTTGACAAACTCCCAAAACTGATCAGTGTGCATTGGTCGGTCTGTCGGTTCCATAATTATTCCCAAAATTAACAAA

Coding sequence (CDS)

ATGGATTCATTTTCATCGCCTTCAAGCGGTTCTTCTTCCCAATTTTCGCCCAACGAATTCAGGGACCAGCTCAAGACTCAGCTTGCTCAGGCGTACGCCGAGGAGTTTCTTGAGACCTTAAGAGTGAAGTGCTTTGACAAGTGCATCACAAAGCCAGGGTCAAGCCTAAGTGGGAGCGAGAGCAGTTGCATCTCCAGGTGCATGGAACGCTATATTGAGGCCACCGGCATCGTCAGTAGAGCCCTGTTTAAGACACCACACTGA

Protein sequence

MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATGIVSRALFKTPH
Homology
[Close]
BLAST of CmaCh15G013340 vs. ExPASy Swiss-Prot
Match: Q9XH48 (Mitochondrial import inner membrane translocase subunit TIM13 OS=Arabidopsis thaliana OX=3702 GN=TIM13 PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 1.6e-26
Identity = 60/84 (71.43%), Postives = 69/84 (82.14%), Query Frame = 0 

Query: 1  MDSFSS-PSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGS 60
          MDS+SS P  GS S  SP    + +KTQLAQAYAEE +ETLR KCFDKC+TKPGSSL GS
Sbjct: 1  MDSYSSPPMGGSGSSVSPEVMMESVKTQLAQAYAEELIETLRTKCFDKCVTKPGSSLGGS 60

Query: 61 ESSCISRCMERYIEATGIVSRALF 84
          ESSCISRC+ERY+EAT I+SR+LF
Sbjct: 61 ESSCISRCVERYMEATAIISRSLF 84

[Close]
BLAST of CmaCh15G013340 vs. ExPASy Swiss-Prot
Match: Q9XGY5 (Mitochondrial import inner membrane translocase subunit Tim13 OS=Oryza sativa subsp. japonica OX=39947 GN=TIM13 PE=3 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-24
Identity = 62/85 (72.94%), Postives = 70/85 (82.35%), Query Frame = 0 

Query: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSS SSGS    +     DQ+K QLAQAYA+EFLET+  KCF KC+TKPGSSLSGSE
Sbjct: 1  MDSFSS-SSGSPP--NTEALMDQIKAQLAQAYAQEFLETVGNKCFAKCVTKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATGIVSRALFKT 86
          SSCISRC++RYIEATGIVSRALF +
Sbjct: 61 SSCISRCVDRYIEATGIVSRALFSS 82

[Close]
BLAST of CmaCh15G013340 vs. ExPASy Swiss-Prot
Match: Q6DGJ3 (Mitochondrial import inner membrane translocase subunit Tim13 OS=Danio rerio OX=7955 GN=timm13 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.7e-12
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0 

Query: 1  MDSFSSP-SSGSSS-QFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSG 60
          M+ F S  SSGSSS +       +Q+K Q+A A A+E L+ +  KCF KCI KPGS+L  
Sbjct: 1  MEGFGSDFSSGSSSGKMDTGTIMEQVKVQIAVANAQELLQRMTDKCFKKCIGKPGSTLDN 60

Query: 61 SESSCISRCMERYIEATGIVSRA 82
          SE  CI+ CM+RY++A   VSRA
Sbjct: 61 SEQKCIAMCMDRYMDAWNTVSRA 83

[Close]
BLAST of CmaCh15G013340 vs. ExPASy Swiss-Prot
Match: Q8AVK1 (Mitochondrial import inner membrane translocase subunit Tim13-B OS=Xenopus laevis OX=8355 GN=timm13-b PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.8e-12
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 0 

Query: 1  MDSFSSPSS---GSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLS 60
          MD F S  S    SS +       +Q+K Q+A A A+E L+ +  KCF KCI KPG SL 
Sbjct: 1  MDGFGSDFSVGGSSSGKVDTGAIMEQVKVQIAVANAQELLQRMTDKCFRKCIGKPGGSLD 60

Query: 61 GSESSCISRCMERYIEATGIVSRA 82
           SE  C++ CM+RY++A  IVSRA
Sbjct: 61 NSEQKCVAMCMDRYMDAWNIVSRA 84

[Close]
BLAST of CmaCh15G013340 vs. ExPASy Swiss-Prot
Match: Q9Y5L4 (Mitochondrial import inner membrane translocase subunit Tim13 OS=Homo sapiens OX=9606 GN=TIMM13 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 8.3e-12
Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0 

Query: 4  FSSPSSGS-SSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESS 63
          F S   GS S +  P    +Q+K Q+A A A+E L+ +  KCF KCI KPG SL  SE  
Sbjct: 5  FGSDFGGSGSGKLDPGLIMEQVKVQIAVANAQELLQRMTDKCFRKCIGKPGGSLDNSEQK 64

Query: 64 CISRCMERYIEATGIVSRA 82
          CI+ CM+RY++A   VSRA
Sbjct: 65 CIAMCMDRYMDAWNTVSRA 83

[Close]
BLAST of CmaCh15G013340 vs. ExPASy TrEMBL
Match: A0A6J1I4K9 (Mitochondrial import inner membrane translocase subunit OS=Cucurbita maxima OX=3661 GN=LOC111469108 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 7.4e-40
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATGIVSRALFKTPH 88
          SSCISRCMERYIEATGIVSRALFKTPH
Sbjct: 61 SSCISRCMERYIEATGIVSRALFKTPH 87

[Close]
BLAST of CmaCh15G013340 vs. ExPASy TrEMBL
Match: A0A6J1ELP2 (Mitochondrial import inner membrane translocase subunit OS=Cucurbita moschata OX=3662 GN=LOC111435758 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 7.4e-40
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATGIVSRALFKTPH 88
          SSCISRCMERYIEATGIVSRALFKTPH
Sbjct: 61 SSCISRCMERYIEATGIVSRALFKTPH 87

[Close]
BLAST of CmaCh15G013340 vs. ExPASy TrEMBL
Match: A0A0A0KK66 (Mitochondrial import inner membrane translocase subunit OS=Cucumis sativus OX=3659 GN=Csa_5G146860 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.2e-37
Identity = 84/87 (96.55%), Postives = 84/87 (96.55%), Query Frame = 0 

Query: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSSPSSGSS QFS NEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATGIVSRALFKTPH 88
          SSCISRCMERYIEAT IVSRALFKTPH
Sbjct: 61 SSCISRCMERYIEATSIVSRALFKTPH 87

[Close]
BLAST of CmaCh15G013340 vs. ExPASy TrEMBL
Match: A0A1S3AUN2 (Mitochondrial import inner membrane translocase subunit OS=Cucumis melo OX=3656 GN=LOC103482878 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.2e-37
Identity = 84/87 (96.55%), Postives = 84/87 (96.55%), Query Frame = 0 

Query: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSSPSSGSS QFS NEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATGIVSRALFKTPH 88
          SSCISRCMERYIEAT IVSRALFKTPH
Sbjct: 61 SSCISRCMERYIEATSIVSRALFKTPH 87

[Close]
BLAST of CmaCh15G013340 vs. ExPASy TrEMBL
Match: A0A6J1DZZ6 (Mitochondrial import inner membrane translocase subunit OS=Momordica charantia OX=3673 GN=LOC111026139 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.2e-36
Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0 

Query: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSSPSSG SSQFS +EF+DQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGPSSQFSAHEFKDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATGIVSRALFKTPH 88
          SSCISRCMERYIEAT IVS+ALFKTPH
Sbjct: 61 SSCISRCMERYIEATSIVSKALFKTPH 87

[Close]
BLAST of CmaCh15G013340 vs. NCBI nr
Match: XP_022929052.1 (mitochondrial import inner membrane translocase subunit TIM13-like isoform X6 [Cucurbita moschata] >XP_022970119.1 mitochondrial import inner membrane translocase subunit TIM13 [Cucurbita maxima] >KAG6579600.1 Mitochondrial import inner membrane translocase subunit TIM13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172.6 bits (436), Expect = 1.5e-39
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATGIVSRALFKTPH 88
          SSCISRCMERYIEATGIVSRALFKTPH
Sbjct: 61 SSCISRCMERYIEATGIVSRALFKTPH 87

[Close]
BLAST of CmaCh15G013340 vs. NCBI nr
Match: XP_023520535.1 (mitochondrial import inner membrane translocase subunit Tim13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCF KCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFAKCITKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATGIVSRALFKTPH 88
          SSCISRCMERYIEATGIVSRALFKTPH
Sbjct: 61 SSCISRCMERYIEATGIVSRALFKTPH 87

[Close]
BLAST of CmaCh15G013340 vs. NCBI nr
Match: XP_038906948.1 (mitochondrial import inner membrane translocase subunit TIM13 [Benincasa hispida])

HSP 1 Score: 167.2 bits (422), Expect = 6.5e-38
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSSPSSGSSSQFS NEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATGIVSRALFKTPH 88
          SSCISRCMERYIEAT IVSRALFKTPH
Sbjct: 61 SSCISRCMERYIEATSIVSRALFKTPH 87

[Close]
BLAST of CmaCh15G013340 vs. NCBI nr
Match: XP_004145880.1 (mitochondrial import inner membrane translocase subunit Tim13 [Cucumis sativus] >XP_008437464.1 PREDICTED: mitochondrial import inner membrane translocase subunit Tim13 [Cucumis melo] >KGN49963.1 hypothetical protein Csa_000141 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 2.5e-37
Identity = 84/87 (96.55%), Postives = 84/87 (96.55%), Query Frame = 0 

Query: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSSPSSGSS QFS NEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATGIVSRALFKTPH 88
          SSCISRCMERYIEAT IVSRALFKTPH
Sbjct: 61 SSCISRCMERYIEATSIVSRALFKTPH 87

[Close]
BLAST of CmaCh15G013340 vs. NCBI nr
Match: XP_022159838.1 (mitochondrial import inner membrane translocase subunit Tim13 [Momordica charantia])

HSP 1 Score: 161.0 bits (406), Expect = 4.6e-36
Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0 

Query: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60
          MDSFSSPSSG SSQFS +EF+DQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGPSSQFSAHEFKDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCISRCMERYIEATGIVSRALFKTPH 88
          SSCISRCMERYIEAT IVS+ALFKTPH
Sbjct: 61 SSCISRCMERYIEATSIVSKALFKTPH 87

[Close]
BLAST of CmaCh15G013340 vs. TAIR 10
Match: AT1G61570.1 (translocase of the inner mitochondrial membrane 13 )

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-27
Identity = 60/84 (71.43%), Postives = 69/84 (82.14%), Query Frame = 0 

Query: 1  MDSFSS-PSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGS 60
          MDS+SS P  GS S  SP    + +KTQLAQAYAEE +ETLR KCFDKC+TKPGSSL GS
Sbjct: 1  MDSYSSPPMGGSGSSVSPEVMMESVKTQLAQAYAEELIETLRTKCFDKCVTKPGSSLGGS 60

Query: 61 ESSCISRCMERYIEATGIVSRALF 84
          ESSCISRC+ERY+EAT I+SR+LF
Sbjct: 61 ESSCISRCVERYMEATAIISRSLF 84

[Close]
BLAST of CmaCh15G013340 vs. TAIR 10
Match: AT5G50810.1 (translocase inner membrane subunit 8 )

HSP 1 Score: 48.5 bits (114), Expect = 3.1e-06
Identity = 22/58 (37.93%), Postives = 35/58 (60.34%), Query Frame = 0 

Query: 24 LKTQLAQAYAEEFLETLRVKCFDKCITK-PGSSLSGSESSCISRCMERYIEATGIVSR 81
          L  +  +A   E +  +   C+DKCIT  PGS  S SESSC++ C +RY++ + I+ +
Sbjct: 15 LAQEKERAMVNEMVSKMTSVCWDKCITSAPGSKFSSSESSCLTHCAQRYMDMSMIIMK 72

[Close]
BLAST of CmaCh15G013340 vs. TAIR 10
Match: AT2G29530.1 (Tim10/DDP family zinc finger protein )

HSP 1 Score: 41.2 bits (95), Expect = 5.0e-04
Identity = 20/58 (34.48%), Postives = 30/58 (51.72%), Query Frame = 0 

Query: 27 QLAQAYAEEFLETLRVKCFDKCITK--PGSSLSGSESSCISRCMERYIEATGIVSRAL 83
          Q    Y  E    L   CF+KC+ K    + L+  E+SCI RC+ +Y +  G+V + L
Sbjct: 19 QTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCIDRCVSKYWQVNGMVGQLL 76

[Close]
BLAST of CmaCh15G013340 vs. TAIR 10
Match: AT2G29530.2 (Tim10/DDP family zinc finger protein )

HSP 1 Score: 41.2 bits (95), Expect = 5.0e-04
Identity = 20/58 (34.48%), Postives = 30/58 (51.72%), Query Frame = 0 

Query: 27 QLAQAYAEEFLETLRVKCFDKCITK--PGSSLSGSESSCISRCMERYIEATGIVSRAL 83
          Q    Y  E    L   CF+KC+ K    + L+  E+SCI RC+ +Y +  G+V + L
Sbjct: 19 QTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCIDRCVSKYWQVNGMVGQLL 76

The following BLAST results are available for this feature:
BLAST of CmaCh15G013340 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9XH481.6e-2671.43Mitochondrial import inner membrane translocase subunit TIM13 OS=Arabidopsis tha... [more]
Q9XGY52.5e-2472.94Mitochondrial import inner membrane translocase subunit Tim13 OS=Oryza sativa su... [more]
Q6DGJ33.7e-1249.40Mitochondrial import inner membrane translocase subunit Tim13 OS=Danio rerio OX=... [more]
Q8AVK14.8e-1246.43Mitochondrial import inner membrane translocase subunit Tim13-B OS=Xenopus laevi... [more]
Q9Y5L48.3e-1248.10Mitochondrial import inner membrane translocase subunit Tim13 OS=Homo sapiens OX... [more]
BLAST of CmaCh15G013340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I4K97.4e-40100.00Mitochondrial import inner membrane translocase subunit OS=Cucurbita maxima OX=3... [more]
A0A6J1ELP27.4e-40100.00Mitochondrial import inner membrane translocase subunit OS=Cucurbita moschata OX... [more]
A0A0A0KK661.2e-3796.55Mitochondrial import inner membrane translocase subunit OS=Cucumis sativus OX=36... [more]
A0A1S3AUN21.2e-3796.55Mitochondrial import inner membrane translocase subunit OS=Cucumis melo OX=3656 ... [more]
A0A6J1DZZ62.2e-3693.10Mitochondrial import inner membrane translocase subunit OS=Momordica charantia O... [more]
BLAST of CmaCh15G013340 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022929052.11.5e-39100.00mitochondrial import inner membrane translocase subunit TIM13-like isoform X6 [C... [more]
XP_023520535.11.3e-3898.85mitochondrial import inner membrane translocase subunit Tim13 [Cucurbita pepo su... [more]
XP_038906948.16.5e-3897.70mitochondrial import inner membrane translocase subunit TIM13 [Benincasa hispida... [more]
XP_004145880.12.5e-3796.55mitochondrial import inner membrane translocase subunit Tim13 [Cucumis sativus] ... [more]
XP_022159838.14.6e-3693.10mitochondrial import inner membrane translocase subunit Tim13 [Momordica charant... [more]
BLAST of CmaCh15G013340 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G61570.11.1e-2771.43translocase of the inner mitochondrial membrane 13 [more]
AT5G50810.13.1e-0637.93translocase inner membrane subunit 8 [more]
AT2G29530.15.0e-0434.48Tim10/DDP family zinc finger protein [more]
AT2G29530.25.0e-0434.48Tim10/DDP family zinc finger protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 23..82
e-value: 4.2E-20
score: 71.1
IPR035427Tim10-like domain superfamilyGENE3D1.10.287.810Mitochondrial import inner membrane translocase subunit tim13 like domainscoord: 29..86
e-value: 6.4E-19
score: 69.2
IPR035427Tim10-like domain superfamilySUPERFAMILY144122Tim10-likecoord: 34..84
NoneNo IPR availablePANTHERPTHR19338:SF14OSJNBA0064M23.16 PROTEINcoord: 5..87
IPR039238Mitochondrial import inner membrane translocase subunit Tim8/13PANTHERPTHR19338TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOGcoord: 5..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G013340.1CmaCh15G013340.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045039 protein insertion into mitochondrial inner membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0042719 mitochondrial intermembrane space protein transporter complex
cellular_component GO:0005758 mitochondrial intermembrane space
molecular_function GO:0046872 metal ion binding