CmaCh15G012710 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G012710
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Aa_trans domain-containing protein
Location	Cma_Chr15: 8068837 .. 8069376 (+)
RNA-Seq Expression	CmaCh15G012710
Synteny	CmaCh15G012710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACCCAACCAATTCCATTTTCCGCCGCCGTTTCTATTCAGAAACCACACGCCAAGAACAACACCCACCACCATCTTTCTTCCAATTCTGTTTCTTTCTTTCCCTAATCCATGGCAGAGCTTCCTCCGGCGGAATCCATTTCAGAGCTTTCTCCCGACGCTGGAGCTGCCTTCGTCCTCGAATCCAAAGGTTTGAAATCAAAATTTTCCCCTTTCAACAAATTCGAACGCGTCGGTAATTGATCGCTTTTTTCTGTACAAACAGGGCAGTGGTGGCATGCCGGATTCCACTTGACGACGGCGATCGTCGGGCCGCCCATTCTCACTCTGCCGTTCGCCTTCCGAGGATTGGGTTGGGGAGTGGGATTTGTGTGCTTGACAATCATGGCGGCGGTGACTTTCTACTCTTACTACCTCTTGTCCAAGGTGCTGGAGCTCTGTGAGAAACAGGGCCGCCGCCACATCCGCTTCCGGGAACTCGCCGCCGACGTCTTGGGTAACCGTTTTTTAATGTTCCAAAAAAAATCAGCATGTCAATAA

mRNA sequence

CAAACCCAACCAATTCCATTTTCCGCCGCCGTTTCTATTCAGAAACCACACGCCAAGAACAACACCCACCACCATCTTTCTTCCAATTCTGTTTCTTTCTTTCCCTAATCCATGGCAGAGCTTCCTCCGGCGGAATCCATTTCAGAGCTTTCTCCCGACGCTGGAGCTGCCTTCGTCCTCGAATCCAAAGGGCAGTGGTGGCATGCCGGATTCCACTTGACGACGGCGATCGTCGGGCCGCCCATTCTCACTCTGCCGTTCGCCTTCCGAGGATTGGGTTGGGGAGTGGGATTTGTGTGCTTGACAATCATGGCGGCGGTGACTTTCTACTCTTACTACCTCTTGTCCAAGGTGCTGGAGCTCTGTGAGAAACAGGGCCGCCGCCACATCCGCTTCCGGGAACTCGCCGCCGACGTCTTGGGTAACCGTTTTTTAATGTTCCAAAAAAAATCAGCATGTCAATAA

Coding sequence (CDS)

ATGGCAGAGCTTCCTCCGGCGGAATCCATTTCAGAGCTTTCTCCCGACGCTGGAGCTGCCTTCGTCCTCGAATCCAAAGGGCAGTGGTGGCATGCCGGATTCCACTTGACGACGGCGATCGTCGGGCCGCCCATTCTCACTCTGCCGTTCGCCTTCCGAGGATTGGGTTGGGGAGTGGGATTTGTGTGCTTGACAATCATGGCGGCGGTGACTTTCTACTCTTACTACCTCTTGTCCAAGGTGCTGGAGCTCTGTGAGAAACAGGGCCGCCGCCACATCCGCTTCCGGGAACTCGCCGCCGACGTCTTGGGTAACCGTTTTTTAATGTTCCAAAAAAAATCAGCATGTCAATAA

Protein sequence

MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLMFQKKSACQ

Homology

[Close]

BLAST of CmaCh15G012710 vs. ExPASy Swiss-Prot
Match: Q8L4X4 (Probable GABA transporter 2 OS=Arabidopsis thaliana OX=3702 GN=At5g41800 PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.3e-40
Identity = 76/106 (71.70%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 5   PPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCL 64
           P    ++ L  DAGA FVL+SKG+WWHAGFHLTTAIVGP ILTLP+AFRGLGW +GFVCL
Sbjct: 7   PDPFPVTRLDSDAGALFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWWLGFVCL 66

Query: 65  TIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLMF 111
           T M  VTFY+YYL+SKVL+ CEK GRRHIRFRELAADVLG+  + +
Sbjct: 67  TTMGLVTFYAYYLMSKVLDHCEKSGRRHIRFRELAADVLGSGLMFY 112

[Close]

BLAST of CmaCh15G012710 vs. ExPASy Swiss-Prot
Match: F4HW02 (GABA transporter 1 OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 7.4e-24
Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 0


Query: 16  DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTIMAAVTFYSY 75
           DAG+ FVL+SKG WWH GFHLTT+IV P +L+LP+AF+ LGW  G  CL   AAVTFYSY
Sbjct: 19  DAGSLFVLKSKGTWWHCGFHLTTSIVAPALLSLPYAFKFLGWAAGISCLVGGAAVTFYSY 78

Query: 76  YLLSKVLELCEKQGRRHIRFRELAADVLGNRF 108
            LLS  LE     G R++RFR++A  +L  ++
Sbjct: 79  TLLSLTLEHHASLGNRYLRFRDMAHHILSPKW 110

[Close]

BLAST of CmaCh15G012710 vs. ExPASy Swiss-Prot
Match: Q9SR44 (Lysine histidine transporter-like 2 OS=Arabidopsis thaliana OX=3702 GN=At1g67640 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 8.8e-09
Identity = 27/79 (34.18%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 28  QWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTIMAAVTFYSYYLLSKVLELCEK 87
           +WW++ FH  TA+VG  +L+LP+A   LGWG G   + +   +TFY+ + + ++ E+   
Sbjct: 32  KWWYSAFHNVTAMVGAGVLSLPYAMSNLGWGPGVTIMIMSWLITFYTLWQMVQMHEMV-- 91

Query: 88  QGRRHIRFRELAADVLGNR 107
            G+R  R+ EL     G +
Sbjct: 92  PGKRFDRYHELGQHAFGEK 108

[Close]

BLAST of CmaCh15G012710 vs. ExPASy Swiss-Prot
Match: Q9C9J0 (Lysine histidine transporter-like 5 OS=Arabidopsis thaliana OX=3702 GN=At1g71680 PE=2 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 26  KGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTIMAAVTFYSYYLLSKVLELC 85
           + +W+++ FH  TA+VG  +L LPFA   LGWG G V + +  A+TFYS + + ++ E  
Sbjct: 36  EAKWYYSAFHNVTAMVGAGVLGLPFAMSQLGWGPGLVAIIMSWAITFYSLWQMVQLHEAV 95

Query: 86  EKQGRRHIRFRELAADVLG 105
              G+R  R+ EL  +  G
Sbjct: 96  --PGKRLDRYPELGQEAFG 112

[Close]

BLAST of CmaCh15G012710 vs. ExPASy Swiss-Prot
Match: O22719 (Lysine histidine transporter-like 3 OS=Arabidopsis thaliana OX=3702 GN=At1g61270 PE=3 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-08
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 29  WWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTIMAAVTFYSYYLLSKVLELCEKQ 88
           W+++ FH  TAIVG  +L LP+A   LGWG G V L +   +T Y+++ + ++ E+ E  
Sbjct: 38  WYYSAFHNVTAIVGAGVLGLPYAMSELGWGPGVVVLILSWVITLYTFWQMIEMHEMFE-- 97

Query: 89  GRRHIRFRELAADVLGNRFLMF 111
           G+R  R+ EL     G +  ++
Sbjct: 98  GKRFDRYHELGQAAFGKKLGLY 117

[Close]

BLAST of CmaCh15G012710 vs. ExPASy TrEMBL
Match: A0A6J1ESG7 (probable GABA transporter 2 OS=Cucurbita moschata OX=3662 GN=LOC111435583 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.5e-53
Identity = 104/110 (94.55%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLMF 111
           FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLG+ ++++
Sbjct: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CmaCh15G012710 vs. ExPASy TrEMBL
Match: A0A5D3C6Y1 (Putative GABA transporter 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001970 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.1e-49
Identity = 100/115 (86.96%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           M +L P  S S+LS DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MTDLSPPASFSKLSTDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLMFQKKSA 116
           F+CLT+MAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFL   K +A
Sbjct: 61  FLCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLFPFKYAA 115

[Close]

BLAST of CmaCh15G012710 vs. ExPASy TrEMBL
Match: A0A0A0KK40 (Aa_trans domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G150970 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48
Identity = 95/110 (86.36%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           MA+L P +S S+LS DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MADLSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLMF 111
           F+CLT+MAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLG+ ++++
Sbjct: 61  FLCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CmaCh15G012710 vs. ExPASy TrEMBL
Match: A0A5A7TH10 (Putative GABA transporter 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G001900 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.6e-48
Identity = 94/110 (85.45%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           M +L P  S S+LS DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MTDLSPPASFSKLSTDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLMF 111
           F+CLT+MAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLG+ ++++
Sbjct: 61  FLCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CmaCh15G012710 vs. ExPASy TrEMBL
Match: A0A1S3ATJ4 (probable GABA transporter 2 OS=Cucumis melo OX=3656 GN=LOC103482813 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.6e-48
Identity = 94/110 (85.45%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           M +L P  S S+LS DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MTDLSPPASFSKLSTDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLMF 111
           F+CLT+MAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLG+ ++++
Sbjct: 61  FLCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CmaCh15G012710 vs. NCBI nr
Match: KAG6579549.1 (putative GABA transporter 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017008.1 putative GABA transporter 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217.2 bits (552), Expect = 7.3e-53
Identity = 104/110 (94.55%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLMF 111
           FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLG+ ++++
Sbjct: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CmaCh15G012710 vs. NCBI nr
Match: XP_022928755.1 (probable GABA transporter 2 [Cucurbita moschata])

HSP 1 Score: 217.2 bits (552), Expect = 7.3e-53
Identity = 104/110 (94.55%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLMF 111
           FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLG+ ++++
Sbjct: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CmaCh15G012710 vs. NCBI nr
Match: XP_023549801.1 (probable GABA transporter 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 215.7 bits (548), Expect = 2.1e-52
Identity = 103/110 (93.64%), Postives = 108/110 (98.18%), Query Frame = 0


Query: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLMF 111
           FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADV G+ ++++
Sbjct: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVFGSGWMLY 110

[Close]

BLAST of CmaCh15G012710 vs. NCBI nr
Match: TYK06096.1 (putative GABA transporter 2 [Cucumis melo var. makuwa])

HSP 1 Score: 205.7 bits (522), Expect = 2.2e-49
Identity = 100/115 (86.96%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           M +L P  S S+LS DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MTDLSPPASFSKLSTDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLMFQKKSA 116
           F+CLT+MAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFL   K +A
Sbjct: 61  FLCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLFPFKYAA 115

[Close]

BLAST of CmaCh15G012710 vs. NCBI nr
Match: XP_038906705.1 (probable GABA transporter 2 [Benincasa hispida])

HSP 1 Score: 203.4 bits (516), Expect = 1.1e-48
Identity = 96/110 (87.27%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           MA+L P +S S+LS DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MADLSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLMF 111
           FVCLT+MAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLG+ ++++
Sbjct: 61  FVCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CmaCh15G012710 vs. TAIR 10
Match: AT5G41800.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 165.2 bits (417), Expect = 3.1e-41
Identity = 76/106 (71.70%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 5   PPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCL 64
           P    ++ L  DAGA FVL+SKG+WWHAGFHLTTAIVGP ILTLP+AFRGLGW +GFVCL
Sbjct: 7   PDPFPVTRLDSDAGALFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWWLGFVCL 66

Query: 65  TIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRFLMF 111
           T M  VTFY+YYL+SKVL+ CEK GRRHIRFRELAADVLG+  + +
Sbjct: 67  TTMGLVTFYAYYLMSKVLDHCEKSGRRHIRFRELAADVLGSGLMFY 112

[Close]

BLAST of CmaCh15G012710 vs. TAIR 10
Match: AT1G08230.2 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 111.3 bits (277), Expect = 5.3e-25
Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 0


Query: 16  DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTIMAAVTFYSY 75
           DAG+ FVL+SKG WWH GFHLTT+IV P +L+LP+AF+ LGW  G  CL   AAVTFYSY
Sbjct: 19  DAGSLFVLKSKGTWWHCGFHLTTSIVAPALLSLPYAFKFLGWAAGISCLVGGAAVTFYSY 78

Query: 76  YLLSKVLELCEKQGRRHIRFRELAADVLGNRF 108
            LLS  LE     G R++RFR++A  +L  ++
Sbjct: 79  TLLSLTLEHHASLGNRYLRFRDMAHHILSPKW 110

[Close]

BLAST of CmaCh15G012710 vs. TAIR 10
Match: AT1G67640.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 61.2 bits (147), Expect = 6.3e-10
Identity = 27/79 (34.18%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 28  QWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTIMAAVTFYSYYLLSKVLELCEK 87
           +WW++ FH  TA+VG  +L+LP+A   LGWG G   + +   +TFY+ + + ++ E+   
Sbjct: 32  KWWYSAFHNVTAMVGAGVLSLPYAMSNLGWGPGVTIMIMSWLITFYTLWQMVQMHEMV-- 91

Query: 88  QGRRHIRFRELAADVLGNR 107
            G+R  R+ EL     G +
Sbjct: 92  PGKRFDRYHELGQHAFGEK 108

[Close]

BLAST of CmaCh15G012710 vs. TAIR 10
Match: AT1G71680.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 60.8 bits (146), Expect = 8.2e-10
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 26  KGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTIMAAVTFYSYYLLSKVLELC 85
           + +W+++ FH  TA+VG  +L LPFA   LGWG G V + +  A+TFYS + + ++ E  
Sbjct: 36  EAKWYYSAFHNVTAMVGAGVLGLPFAMSQLGWGPGLVAIIMSWAITFYSLWQMVQLHEAV 95

Query: 86  EKQGRRHIRFRELAADVLG 105
              G+R  R+ EL  +  G
Sbjct: 96  --PGKRLDRYPELGQEAFG 112

[Close]

BLAST of CmaCh15G012710 vs. TAIR 10
Match: AT1G61270.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 29  WWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTIMAAVTFYSYYLLSKVLELCEKQ 88
           W+++ FH  TAIVG  +L LP+A   LGWG G V L +   +T Y+++ + ++ E+ E  
Sbjct: 38  WYYSAFHNVTAIVGAGVLGLPYAMSELGWGPGVVVLILSWVITLYTFWQMIEMHEMFE-- 97

Query: 89  GRRHIRFRELAADVLGNRFLMF 111
           G+R  R+ EL     G +  ++
Sbjct: 98  GKRFDRYHELGQAAFGKKLGLY 117

The following BLAST results are available for this feature:

BLAST of CmaCh15G012710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L4X4	4.3e-40	71.70	Probable GABA transporter 2 OS=Arabidopsis thaliana OX=3702 GN=At5g41800 PE=1 SV...	[more]
F4HW02	7.4e-24	56.52	GABA transporter 1 OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=1 SV=1	[more]
Q9SR44	8.8e-09	34.18	Lysine histidine transporter-like 2 OS=Arabidopsis thaliana OX=3702 GN=At1g67640...	[more]
Q9C9J0	1.1e-08	37.97	Lysine histidine transporter-like 5 OS=Arabidopsis thaliana OX=3702 GN=At1g71680...	[more]
O22719	1.5e-08	35.37	Lysine histidine transporter-like 3 OS=Arabidopsis thaliana OX=3702 GN=At1g61270...	[more]

BLAST of CmaCh15G012710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESG7	3.5e-53	94.55	probable GABA transporter 2 OS=Cucurbita moschata OX=3662 GN=LOC111435583 PE=3 S...	[more]
A0A5D3C6Y1	1.1e-49	86.96	Putative GABA transporter 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0KK40	1.2e-48	86.36	Aa_trans domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G150970 PE...	[more]
A0A5A7TH10	7.6e-48	85.45	Putative GABA transporter 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3ATJ4	7.6e-48	85.45	probable GABA transporter 2 OS=Cucumis melo OX=3656 GN=LOC103482813 PE=3 SV=1	[more]

BLAST of CmaCh15G012710 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579549.1	7.3e-53	94.55	putative GABA transporter 2, partial [Cucurbita argyrosperma subsp. sororia] >KA...	[more]
XP_022928755.1	7.3e-53	94.55	probable GABA transporter 2 [Cucurbita moschata]	[more]
XP_023549801.1	2.1e-52	93.64	probable GABA transporter 2 [Cucurbita pepo subsp. pepo]	[more]
TYK06096.1	2.2e-49	86.96	putative GABA transporter 2 [Cucumis melo var. makuwa]	[more]
XP_038906705.1	1.1e-48	87.27	probable GABA transporter 2 [Benincasa hispida]	[more]

BLAST of CmaCh15G012710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41800.1	3.1e-41	71.70	Transmembrane amino acid transporter family protein	[more]
AT1G08230.2	5.3e-25	56.52	Transmembrane amino acid transporter family protein	[more]
AT1G67640.1	6.3e-10	34.18	Transmembrane amino acid transporter family protein	[more]
AT1G71680.1	8.2e-10	37.97	Transmembrane amino acid transporter family protein	[more]
AT1G61270.1	1.1e-09	35.37	Transmembrane amino acid transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 26..107 e-value: 2.1E-19 score: 69.6
None	No IPR available	PANTHER	PTHR48017:SF54	GABA TRANSPORTER 2-RELATED	coord: 20..108
None	No IPR available	PANTHER	PTHR48017	OS05G0424000 PROTEIN-RELATED	coord: 20..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G012710.1	CmaCh15G012710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006865	amino acid transport
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0015293	symporter activity