CmaCh15G012560 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh15G012560
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionLEA_2 domain-containing protein
LocationCma_Chr15: 7976942 .. 7977766 (+)
RNA-Seq ExpressionCmaCh15G012560
SyntenyCmaCh15G012560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGACGACAGCCAGAGCTTCCCAATAGCGCACTACAAAGCTCACCACAAATCCGACGAAGAACAACGCCGACACCTCACCACATTCAAAGCCCTCCAAAAGGAACGCTCCAACAAGTGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCTCCGTCGCCGTTTTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTGCTCTCCACTTCTCCTCTCTCTCCGTCGCCAAATTCTCCCTCTCCAACACCAATTCCTCTTCTCCCTCCCTTAACCTCACCGTCACCGCCCAACTCGCCGTCGACAATTCCAACTTCGGCCCCTTCAATTTCGACTACGCCTCTGTCGGTTTCATCTACGCCGGTGCCATCGTCGGCCAGAGCACTACCGGCGCCGGCAGAGCCAAAGCCAAGGGAACCAAAACCATGAATGTCACCGTCCAAGCTTCCGCCAACAACATCAGCGCCGATTACAACAATTCCCGGCTGTTGAATCTGAGTAGCTTCGCGAATTTAAGAGGCAGAGTCCGATTGATTCATATTTTCCGGCGGAGGGCCTCGTCGGAGATTAGCTGTTCCATGATCCTGGATTTGAATACTCATCAAATTCAGCATAATTGGGTTTGCGAGTAGCCATCAGTATCGGAATCCATGAACTCCATGGGCCCAATTAGTTATTGAATTCTTAAATTAATTTTATTTTATTTTTCTTACAATTTTGGAGGTTTTCTAATGTAAATAAGACTCTTATGCTTTATTATTTCATATAATATATATACATATTTTAATTTGATTTTTTTTTTAAAGCTATGCGGTTAA

mRNA sequence

ATGGCGGACGACAGCCAGAGCTTCCCAATAGCGCACTACAAAGCTCACCACAAATCCGACGAAGAACAACGCCGACACCTCACCACATTCAAAGCCCTCCAAAAGGAACGCTCCAACAAGTGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCTCCGTCGCCGTTTTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTGCTCTCCACTTCTCCTCTCTCTCCGTCGCCAAATTCTCCCTCTCCAACACCAATTCCTCTTCTCCCTCCCTTAACCTCACCGTCACCGCCCAACTCGCCGTCGACAATTCCAACTTCGGCCCCTTCAATTTCGACTACGCCTCTGTCGGTTTCATCTACGCCGGTGCCATCGTCGGCCAGAGCACTACCGGCGCCGGCAGAGCCAAAGCCAAGGGAACCAAAACCATGAATGTCACCGTCCAAGCTTCCGCCAACAACATCAGCGCCGATTACAACAATTCCCGGCTGTTGAATCTGAGTAGCTTCGCGAATTTAAGAGGCAGAGTCCGATTGATTCATATTTTCCGGCGGAGGGCCTCGTCGGAGATTAGCTGTTCCATGATCCTGGATTTGAATACTCATCAAATTCAGCATAATTGGCTATGCGGTTAA

Coding sequence (CDS)

ATGGCGGACGACAGCCAGAGCTTCCCAATAGCGCACTACAAAGCTCACCACAAATCCGACGAAGAACAACGCCGACACCTCACCACATTCAAAGCCCTCCAAAAGGAACGCTCCAACAAGTGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCTCCGTCGCCGTTTTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTGCTCTCCACTTCTCCTCTCTCTCCGTCGCCAAATTCTCCCTCTCCAACACCAATTCCTCTTCTCCCTCCCTTAACCTCACCGTCACCGCCCAACTCGCCGTCGACAATTCCAACTTCGGCCCCTTCAATTTCGACTACGCCTCTGTCGGTTTCATCTACGCCGGTGCCATCGTCGGCCAGAGCACTACCGGCGCCGGCAGAGCCAAAGCCAAGGGAACCAAAACCATGAATGTCACCGTCCAAGCTTCCGCCAACAACATCAGCGCCGATTACAACAATTCCCGGCTGTTGAATCTGAGTAGCTTCGCGAATTTAAGAGGCAGAGTCCGATTGATTCATATTTTCCGGCGGAGGGCCTCGTCGGAGATTAGCTGTTCCATGATCCTGGATTTGAATACTCATCAAATTCAGCATAATTGGCTATGCGGTTAA

Protein sequence

MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRLIHIFRRRASSEISCSMILDLNTHQIQHNWLCG
Homology
BLAST of CmaCh15G012560 vs. ExPASy Swiss-Prot
Match: Q6DST1 (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-08
Identity = 62/215 (28.84%), Postives = 108/215 (50.23%), Query Frame = 0

Query: 4   DSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFALIV 63
           D     +A  + + +SDEEQ      ++   +E   KC +Y  +  V +    LI + I 
Sbjct: 3   DEDRITLAPTEIYGRSDEEQSGP-RIWRRKTEEPPGKCLVYSLTIIVIIFALCLILSSIF 62

Query: 64  LRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGFIYA 123
           LR++ P +   S+S      S  NS++P  N T+ + +++ NSNFG F F+ +++  +YA
Sbjct: 63  LRISKPEIETRSISTRDLR-SGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYA 122

Query: 124 G-AIVGQSTTGAGRAKA-KGTKTMNVTVQASANNI--SADYNNS---RLLNLSSFANLRG 183
              +VG++     R +A K  +   V V+  +  +  + D +       L L S A +RG
Sbjct: 123 DHGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDLRLGFLELRSVAEVRG 182

Query: 184 RVRLIHIFRRRASSEISCSMILDLNTHQIQHNWLC 212
           R++++   +R   S +SC+M L+L    IQ N LC
Sbjct: 183 RIKVLG-RKRWKVSVMSCTMRLNLTGRFIQ-NLLC 213

BLAST of CmaCh15G012560 vs. ExPASy TrEMBL
Match: A0A6J1I3M2 (uncharacterized protein LOC111468875 OS=Cucurbita maxima OX=3661 GN=LOC111468875 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.7e-106
Identity = 210/211 (99.53%), Postives = 211/211 (100.00%), Query Frame = 0

Query: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60
           MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA
Sbjct: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF 120
           LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF
Sbjct: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF 120

Query: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL 180
           IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL
Sbjct: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL 180

Query: 181 IHIFRRRASSEISCSMILDLNTHQIQHNWLC 212
           IHIFRRRASSEISCSMILDLNTHQIQHNW+C
Sbjct: 181 IHIFRRRASSEISCSMILDLNTHQIQHNWVC 211

BLAST of CmaCh15G012560 vs. ExPASy TrEMBL
Match: A0A1S3ATY3 (late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC103482793 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.7e-69
Identity = 147/213 (69.01%), Postives = 177/213 (83.10%), Query Frame = 0

Query: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHY+AHHK+DEEQ+  L TFK L KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQ--LATFKTLHKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSN-TNSSSP-SLNLTVTAQLAVDNSNFGPFNFDYASV 120
           LIVLRVNSP+++ S++S+ KFSLSN  NSSSP SL+L+ +A   VDNSNFGPFNFD  +V
Sbjct: 61  LIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GRA+AKG+K MNVTV+ SA N+S    ++ +L+LSSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVS---GSNGILSLSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEISCSMILDLNTHQIQHNWLC 212
           RLIH+FRRR SSEISCSM LDLNTHQIQHNW+C
Sbjct: 181 RLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVC 208

BLAST of CmaCh15G012560 vs. ExPASy TrEMBL
Match: A0A5A7TL68 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002140 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.9e-69
Identity = 147/213 (69.01%), Postives = 177/213 (83.10%), Query Frame = 0

Query: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHY+AHHK+DEEQ+  L TFK L KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQ--LATFKTLHKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSN-TNSSSP-SLNLTVTAQLAVDNSNFGPFNFDYASV 120
           LIVLRVNSP+++ S++S+ KFSLSN  NSSSP SL+L+ +A   VDNSNFGPFNFD  +V
Sbjct: 61  LIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFIVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GRA+AKG+K MNVTV+ SA N+S    ++ +L+LSSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVS---GSNGILSLSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEISCSMILDLNTHQIQHNWLC 212
           RLIH+FRRR SSEISCSM LDLNTHQIQHNW+C
Sbjct: 181 RLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVC 208

BLAST of CmaCh15G012560 vs. ExPASy TrEMBL
Match: A0A0A0KQT7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.1e-68
Identity = 148/213 (69.48%), Postives = 173/213 (81.22%), Query Frame = 0

Query: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHY+AHHK +EEQ+  L TFK L+KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKPNEEQQ--LATFKILRKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLS-NTNSSSP-SLNLTVTAQLAVDNSNFGPFNFDYASV 120
           LIVLRVNSP++  SS+S  + SLS NTNSSSP SLNL+  A+  VDNSNFGPFNFD  +V
Sbjct: 61  LIVLRVNSPSISLSSISNPRVSLSNNTNSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GRA AKG+K MNVTV+ SA N+S    ++ +LN SSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVS---GSNGILNFSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEISCSMILDLNTHQIQHNWLC 212
           RLIHIFRRR SSEISCSM LDLNTHQIQHNW+C
Sbjct: 181 RLIHIFRRRVSSEISCSMNLDLNTHQIQHNWVC 208

BLAST of CmaCh15G012560 vs. ExPASy TrEMBL
Match: A0A6J1H2C0 (uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC111459739 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.3e-58
Identity = 126/211 (59.72%), Postives = 158/211 (74.88%), Query Frame = 0

Query: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M + S SFP+ H +AHHK+              + E SNKCFIY+FS+FVFL VA+LIF+
Sbjct: 1   MGEHSHSFPLPHSQAHHKTP-------------KNEPSNKCFIYIFSSFVFLCVALLIFS 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF 120
           LIVLRVNSP +  SS+SV KFS+SNTNSSS SLNLT+ A+ ++DNSNFGPF FDY +V F
Sbjct: 61  LIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIFDYVTVVF 120

Query: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL 180
           +Y G IVG+ +TG GRA+AKGT  MNV+V+AS  N+S+D N S +LN+SSFA   GR+ L
Sbjct: 121 MYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHL 180

Query: 181 IHIFRRRASSEISCSMILDLNTHQIQHNWLC 212
           IH+ R+R  SEISCS+ LDLNTHQIQ  W+C
Sbjct: 181 IHVLRKRIWSEISCSINLDLNTHQIQPRWVC 198

BLAST of CmaCh15G012560 vs. NCBI nr
Match: XP_022969774.1 (uncharacterized protein LOC111468875 [Cucurbita maxima])

HSP 1 Score: 395.2 bits (1014), Expect = 3.6e-106
Identity = 210/211 (99.53%), Postives = 211/211 (100.00%), Query Frame = 0

Query: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60
           MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA
Sbjct: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF 120
           LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF
Sbjct: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF 120

Query: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL 180
           IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL
Sbjct: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL 180

Query: 181 IHIFRRRASSEISCSMILDLNTHQIQHNWLC 212
           IHIFRRRASSEISCSMILDLNTHQIQHNW+C
Sbjct: 181 IHIFRRRASSEISCSMILDLNTHQIQHNWVC 211

BLAST of CmaCh15G012560 vs. NCBI nr
Match: KAG6579535.1 (Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 377.1 bits (967), Expect = 1.0e-100
Identity = 199/211 (94.31%), Postives = 205/211 (97.16%), Query Frame = 0

Query: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M DDSQSFPIAHY+AHHKSDEEQ RHLTTFKAL+KERSNKCFIYVFSAFVFLSVAVLIFA
Sbjct: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF 120
           LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLT+TAQLAVDNSNFGPFNFD+ASVGF
Sbjct: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTLTAQLAVDNSNFGPFNFDHASVGF 120

Query: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL 180
           IYAGAIVGQ+TTGAGR KAKGTKTMNVTV ASA NISADYNNSRLLNLSSFANLRGRVRL
Sbjct: 121 IYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL 180

Query: 181 IHIFRRRASSEISCSMILDLNTHQIQHNWLC 212
           IHIFRRRASSEI CSMILDLNTHQIQHNW+C
Sbjct: 181 IHIFRRRASSEIGCSMILDLNTHQIQHNWVC 211

BLAST of CmaCh15G012560 vs. NCBI nr
Match: XP_038875090.1 (late embryogenesis abundant protein At1g64065 [Benincasa hispida])

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-77
Identity = 156/211 (73.93%), Postives = 184/211 (87.20%), Query Frame = 0

Query: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHY+AHHKSDEEQ+  L TFK L+KERSNKCFIYVFS FVFLSVAVLIFA
Sbjct: 1   MVEDSQSFPLAHYQAHHKSDEEQQ--LATFKTLRKERSNKCFIYVFSTFVFLSVAVLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF 120
           LIVLRVNSP++  SS+S+ KFS++N NSSSPSLNLT+ A+  VDNSNFGPFNFD  +VG 
Sbjct: 61  LIVLRVNSPSIQLSSVSIPKFSITNANSSSPSLNLTMIAEFTVDNSNFGPFNFDNGTVGL 120

Query: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL 180
           +Y GAIVG+ +TGAGRA+AKG+K MNVT++ASA NIS+D NN  +LNL+SF  LRGRVRL
Sbjct: 121 MYGGAIVGEKSTGAGRAEAKGSKRMNVTMEASAKNISSDSNNLGILNLNSFVKLRGRVRL 180

Query: 181 IHIFRRRASSEISCSMILDLNTHQIQHNWLC 212
           IHIFRRR SSEI+CSM LD+NTHQIQ+NW+C
Sbjct: 181 IHIFRRRTSSEITCSMNLDMNTHQIQYNWVC 209

BLAST of CmaCh15G012560 vs. NCBI nr
Match: XP_008437349.1 (PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo])

HSP 1 Score: 271.2 bits (692), Expect = 7.7e-69
Identity = 147/213 (69.01%), Postives = 177/213 (83.10%), Query Frame = 0

Query: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHY+AHHK+DEEQ+  L TFK L KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQ--LATFKTLHKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSN-TNSSSP-SLNLTVTAQLAVDNSNFGPFNFDYASV 120
           LIVLRVNSP+++ S++S+ KFSLSN  NSSSP SL+L+ +A   VDNSNFGPFNFD  +V
Sbjct: 61  LIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GRA+AKG+K MNVTV+ SA N+S    ++ +L+LSSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVS---GSNGILSLSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEISCSMILDLNTHQIQHNWLC 212
           RLIH+FRRR SSEISCSM LDLNTHQIQHNW+C
Sbjct: 181 RLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVC 208

BLAST of CmaCh15G012560 vs. NCBI nr
Match: KAA0042716.1 (late embryogenesis abundant protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.8 bits (691), Expect = 1.0e-68
Identity = 147/213 (69.01%), Postives = 177/213 (83.10%), Query Frame = 0

Query: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHY+AHHK+DEEQ+  L TFK L KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQ--LATFKTLHKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSN-TNSSSP-SLNLTVTAQLAVDNSNFGPFNFDYASV 120
           LIVLRVNSP+++ S++S+ KFSLSN  NSSSP SL+L+ +A   VDNSNFGPFNFD  +V
Sbjct: 61  LIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFIVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GRA+AKG+K MNVTV+ SA N+S    ++ +L+LSSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVS---GSNGILSLSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEISCSMILDLNTHQIQHNWLC 212
           RLIH+FRRR SSEISCSM LDLNTHQIQHNW+C
Sbjct: 181 RLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVC 208

BLAST of CmaCh15G012560 vs. TAIR 10
Match: AT1G64065.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-09
Identity = 62/215 (28.84%), Postives = 108/215 (50.23%), Query Frame = 0

Query: 4   DSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFALIV 63
           D     +A  + + +SDEEQ      ++   +E   KC +Y  +  V +    LI + I 
Sbjct: 3   DEDRITLAPTEIYGRSDEEQSGP-RIWRRKTEEPPGKCLVYSLTIIVIIFALCLILSSIF 62

Query: 64  LRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGFIYA 123
           LR++ P +   S+S      S  NS++P  N T+ + +++ NSNFG F F+ +++  +YA
Sbjct: 63  LRISKPEIETRSISTRDLR-SGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYA 122

Query: 124 G-AIVGQSTTGAGRAKA-KGTKTMNVTVQASANNI--SADYNNS---RLLNLSSFANLRG 183
              +VG++     R +A K  +   V V+  +  +  + D +       L L S A +RG
Sbjct: 123 DHGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDLRLGFLELRSVAEVRG 182

Query: 184 RVRLIHIFRRRASSEISCSMILDLNTHQIQHNWLC 212
           R++++   +R   S +SC+M L+L    IQ N LC
Sbjct: 183 RIKVLG-RKRWKVSVMSCTMRLNLTGRFIQ-NLLC 213

BLAST of CmaCh15G012560 vs. TAIR 10
Match: AT4G23610.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 42.7 bits (99), Expect = 4.2e-04
Identity = 55/212 (25.94%), Postives = 98/212 (46.23%), Query Frame = 0

Query: 3   DDSQSFPIAHYKAHHKSD----EEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLI 62
           ++ Q+ P+A      +SD    E+Q  H  T     + +   C  ++ S  + ++V  ++
Sbjct: 9   NEDQAKPLAPLFLTTRSDQPDEEDQYHHDRTKYVHSQTKLILCCGFIASLTMLIAVTFIV 68

Query: 63  FALIVLRVNSPALHFSSLSV-AKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYAS 122
            +L V  ++SP L   S+S   +F   N    + + N TV+ ++++ N N   F     +
Sbjct: 69  LSLTVFHLHSPNLTVDSISFNQRFDFVN-GKVNTNQNTTVSVEISLHNPNPALFIVKNVN 128

Query: 123 VGFIYAG-AIVGQSTTGAGRAKAKGTKTMNVTVQ-------ASANNISADYNNSRLLNLS 182
           V F +    +VG+S   +    AK T  MN+T +       AS   +  D  N R ++L 
Sbjct: 129 VSFYHGELVVVGESIRRSETIPAKRTVKMNLTAEIVKTKLLASLPGLMEDL-NGRGVDLK 188

Query: 183 SFANLRGRVRLIHIFRRRASSEISCSMILDLN 202
           S   +RGRV+ + IFR+    +  C M +  N
Sbjct: 189 SSVEVRGRVKKMKIFRKTVHLQTDCFMKMTTN 218

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q6DST12.7e-0828.84Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN... [more]
Match NameE-valueIdentityDescription
A0A6J1I3M21.7e-10699.53uncharacterized protein LOC111468875 OS=Cucurbita maxima OX=3661 GN=LOC111468875... [more]
A0A1S3ATY33.7e-6969.01late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A5A7TL684.9e-6969.01Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A0A0KQT74.1e-6869.48LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 ... [more]
A0A6J1H2C02.3e-5859.72uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC1114597... [more]
Match NameE-valueIdentityDescription
XP_022969774.13.6e-10699.53uncharacterized protein LOC111468875 [Cucurbita maxima][more]
KAG6579535.11.0e-10094.31Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_038875090.11.2e-7773.93late embryogenesis abundant protein At1g64065 [Benincasa hispida][more]
XP_008437349.17.7e-6969.01PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo][more]
KAA0042716.11.0e-6869.01late embryogenesis abundant protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT1G64065.11.9e-0928.84Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT4G23610.14.2e-0425.94Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.1820coord: 59..182
e-value: 1.6E-5
score: 26.8
NoneNo IPR availablePANTHERPTHR31852:SF192LATE EMBRYOGENESIS ABUNDANT PROTEINcoord: 8..211
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 8..211
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 101..195
e-value: 1.3E-8
score: 35.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G012560.1CmaCh15G012560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane