CmaCh15G012460 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G012460
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	SnoaL-like domain-containing protein
Location	Cma_Chr15: 7918908 .. 7922021 (+)
RNA-Seq Expression	CmaCh15G012460
Synteny	CmaCh15G012460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATCCATCCTCCTCCTGCAATGAACTAATACTCACAATGGCCCTTATTACGAGCCCTCCTCCTCAAGCTCTCACCTTGGGCTCCCAACCATTTAGAACATTTGCATATACATCCATCCCTAAGAAACCCTCATCTTTGTTTCAACAAAAGAAGCTTAGGAAAACAAGCTACACATTAGTCACCGACGTTAAGCCCCGTTTCGTGTTGTCGTGCTTAAAGGACGGCTCGGTTTGTAGCTTAGATTCATGTTCAAATTCTCCATCAGAAATGGTTAAGAAATTCTACGAGTGCATCAATGAAAAGAAGTTGAAGGAATTGAGTAGTTACATCTCAGAAGATTGCCTTATTGAGGACTCCTTGTTTGATGAAGCATTTATAGGGAAGGAGGTATTTTTGTGTTCTCGTTCATACTAGTATGAATGTAGAGAAGAAATCTGTTCTTGATAGTCCATGGAACCTACTTGCAGGCTGCTCTCAAGTTCTTTAAAGAACTAACTCAAAGCATGGGTCCGGATGTGAAGTTTAGGTTTCGTAACGTCTATGAAAGTGGCACTTCTCGGGCTGGAGCAACCTGGCATCTAGGTACTTCTATTTATCATTAGAGATGTCTATTTAGAATCCACGTTGAAATGGAGAAAAGAAGAGAAGAGAGTTGGAAGAGATTTTTCTCCTTAAGTTAAATGGGGTAGGGACAAAGATTACATTCTCGTCCTTGTTCTTGGCCTCGGCCTTACCTTGCATGCAGTGTGGACAGGGACAAAGATTGCATTCTCGTTCGTGTTTTGGCCTCGGTCTCGCCCGCAGTGGGGACAGGGGCAGAGGTTACATTCTTGTCCCTATTCTTTGCCTCAGCCTCGCTCGTGATGGGGACAGGGACGAAGATTTCATTCTCATCCCTGTTTTCGCGGGCAAGGACGGGGATTACATTCTCATCCCTGTTTTTGGCCTCGGTCTCGCCCGTGGTGGGGGCAGGGATGGAGATTACATTTTCATCCTTGATTTTGGCCTTGGCCTCGCCTACGATGGGGGCAAGGACGAAGATTACATTCTTTGCCTCAGCCTCACCTGTCCGCCTCACCTGTGGTGGGGACAGGGATGGAGATTACATTCTCGTCCCTGTTCTTGGTTTTGGCCTCGTCCGCGGTGGGAATAGGGACAGAGATTACATTCTCATCCTTGTTTTTGGCATAGGCCCCTAGCAATGGGGACAAGGACGAAGATTACATTCTCGTCCCGGTTCTTGGCCTCGACCTTGTTCGCAGTGGGAACAGGGACGAAGATTTCATTCTCGTCCATGTTCCTGGCCTCGGCCTCACCCACGATGGAGACAGCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCTATTTTTGGCCTTGGCCTCGCCCGCAGTGGGGACATGGGCGGAGATTACATTCTTGTCCCTATTTTTTTCCTCGGCCTCACCCACGGTGGAGACAGGGATGGAAATTATATTCTCGTCTCCATGCTTGGCCTCAGCCTTGCTCGTGTGGGACAAGGATGGAGGTTACATTCTCATCCTTGTTCTTGGCCTCGACCTCACCTGCAGTGGGGACAGAGACAAAAATTACATTTTTATCCCTGTTCTTGGCCTCTGCCTCGTCTGCAATGGGGATTGGGACGAAGATTACATTCTCGTCTCTGTTCTTGGCCTCAGTCTCACCCGCAATGACCCGGTCAAAGACGTGAAGAATTGCCTATTCCCACCTCACCCTTGAGCATCTCTACTACCATCATCCCTCCAACTCTTATGGTAATATATGAACAAACTTGGTCATCATTGAACAGTGTGGAAGAACACAAAGATTCCCTTCACCAAAGGTTGCACCTTCATTGACATCAACAACGAAGAAAGAACTATACAGTAAACCAACCACACATACAAACTCAATACCCAATGATCCTTTCAACTAATTGGTATCAAGAAATTACTCGCTATCTTACACGTAACTCTTATGCAGGAAGGCACAAATCATAATGGAACCACAAGTAAAAGCGGGGCATCTCATCTTGGTGAGTACACAACTCATAATTCCCAGCAATTTCAACACTCAAAATGAGTATGATCCATACAAATTGTGTAAACAAATCATCAGGGTATGATGAAGCTGGTAACCTCCTTGCTTGCTCAGTATCCAGCAATTCATAAATGTAAGTCATTTTGGATACCTTAAGCCATAGAACTTCATGAACAAACATGACATTATGGGTGTTGCAGGGGTGATGAAACTTTCCCAGCAGCGTTGGGTAAGGTGGCTGGCCAAGATCTGTGTAGTTCTCTACAAGTTCTTCTTGCACAGCCTTATGAGGAGCTATCTAACCTTTATACATTGTGGCTCTCTAATGTTTGTTTTTACAGTCAAATTGTTACGTTGGGTCATAG

mRNA sequence

CCCATCCATCCTCCTCCTGCAATGAACTAATACTCACAATGGCCCTTATTACGAGCCCTCCTCCTCAAGCTCTCACCTTGGGCTCCCAACCATTTAGAACATTTGCATATACATCCATCCCTAAGAAACCCTCATCTTTGTTTCAACAAAAGAAGCTTAGGAAAACAAGCTACACATTAGTCACCGACGTTAAGCCCCGTTTCGTGTTGTCGTGCTTAAAGGACGGCTCGGTTTGTAGCTTAGATTCATGTTCAAATTCTCCATCAGAAATGGTTAAGAAATTCTACGAGTGCATCAATGAAAAGAAGTTGAAGGAATTGAGTAGTTACATCTCAGAAGATTGCCTTATTGAGGACTCCTTGTTTGATGAAGCATTTATAGGGAAGGAGGCTGCTCTCAAGTTCTTTAAAGAACTAACTCAAAGCATGGGTCCGGATGTGAAGTTTAGGTTTCGTAACGTCTATGAAACCTCGCTCGTGATGGGGACAGGGACGAAGATTTCATTCTCATCCCTGTTTTCGCGGGCAAGGACGGGGATTACATTCTCATCCCTGTTTTTGGCCTCGGTCTCGCCCGTGGTGGGGGCAGGGATGGAGATTACATTTTCATCCTTGATTTTGGCCTTGGCCTCGCCTACGATGGGGGCAAGGACGAAGATTACATTCTTTGCCTCAGCCTCACCTGTCCGCCTCACCTGTGGTGGGGACAGGGATGGAGATTACATTCTCGTCCCTGTTCTTGGTTTTGGCCTCGTCCGCGGTGGGAATAGGGACAGAGATTACATTCTCATCCTTGCCCCTAGCAATGGGGACAAGGACGAAGATTACATTCTCGTCCCGGTTCTTGGCCTCGACCTTGTTCGCATGGGGACATGGGCGGAGATTACATTCTTGTCCCTATTTTTTTCCTCGGCCTCACCCACGGTGGAGACAGGGATGGAAATTATATTCTCGTCTCCATGCTTGGCCTCAGCCTTGCTCGTGTGGGACAAGGATGGAGGTTACATTCTCATCCTTGTTCTTGGCCTCGACCTCACCTGCAGTGGGGACAGAGACAAAAATTACATTTTTATCCCTGTTCTTGGCCTCTGCCTCGTCTGCAATGGGGATTGGGACGAAGATTACATTCTCGTCTCTGTTCTTGGCCTCAGTCTCACCCGCAATGACCCGAACACAAAGATTCCCTTCACCAAAGGTTGCACCTTCATTGACATCAACAACGAAGAAAGAACTATACAGAAGGCACAAATCATAATGGAACCACAAGTAAAAGCGGGGCATCTCATCTTGGGTATGATGAAGCTGGTAACCTCCTTGCTTGCTCAGGGTGATGAAACTTTCCCAGCAGCGTTGGGTAAGGTGGCTGGCCAAGATCTGTGTAGTTCTCTACAAGTTCTTCTTGCACAGCCTTATGAGGAGCTATCTAACCTTTATACATTGTGGCTCTCTAATTCAAATTGTTACGTTGGGTCATAG

Coding sequence (CDS)

ATGGCCCTTATTACGAGCCCTCCTCCTCAAGCTCTCACCTTGGGCTCCCAACCATTTAGAACATTTGCATATACATCCATCCCTAAGAAACCCTCATCTTTGTTTCAACAAAAGAAGCTTAGGAAAACAAGCTACACATTAGTCACCGACGTTAAGCCCCGTTTCGTGTTGTCGTGCTTAAAGGACGGCTCGGTTTGTAGCTTAGATTCATGTTCAAATTCTCCATCAGAAATGGTTAAGAAATTCTACGAGTGCATCAATGAAAAGAAGTTGAAGGAATTGAGTAGTTACATCTCAGAAGATTGCCTTATTGAGGACTCCTTGTTTGATGAAGCATTTATAGGGAAGGAGGCTGCTCTCAAGTTCTTTAAAGAACTAACTCAAAGCATGGGTCCGGATGTGAAGTTTAGGTTTCGTAACGTCTATGAAACCTCGCTCGTGATGGGGACAGGGACGAAGATTTCATTCTCATCCCTGTTTTCGCGGGCAAGGACGGGGATTACATTCTCATCCCTGTTTTTGGCCTCGGTCTCGCCCGTGGTGGGGGCAGGGATGGAGATTACATTTTCATCCTTGATTTTGGCCTTGGCCTCGCCTACGATGGGGGCAAGGACGAAGATTACATTCTTTGCCTCAGCCTCACCTGTCCGCCTCACCTGTGGTGGGGACAGGGATGGAGATTACATTCTCGTCCCTGTTCTTGGTTTTGGCCTCGTCCGCGGTGGGAATAGGGACAGAGATTACATTCTCATCCTTGCCCCTAGCAATGGGGACAAGGACGAAGATTACATTCTCGTCCCGGTTCTTGGCCTCGACCTTGTTCGCATGGGGACATGGGCGGAGATTACATTCTTGTCCCTATTTTTTTCCTCGGCCTCACCCACGGTGGAGACAGGGATGGAAATTATATTCTCGTCTCCATGCTTGGCCTCAGCCTTGCTCGTGTGGGACAAGGATGGAGGTTACATTCTCATCCTTGTTCTTGGCCTCGACCTCACCTGCAGTGGGGACAGAGACAAAAATTACATTTTTATCCCTGTTCTTGGCCTCTGCCTCGTCTGCAATGGGGATTGGGACGAAGATTACATTCTCGTCTCTGTTCTTGGCCTCAGTCTCACCCGCAATGACCCGAACACAAAGATTCCCTTCACCAAAGGTTGCACCTTCATTGACATCAACAACGAAGAAAGAACTATACAGAAGGCACAAATCATAATGGAACCACAAGTAAAAGCGGGGCATCTCATCTTGGGTATGATGAAGCTGGTAACCTCCTTGCTTGCTCAGGGTGATGAAACTTTCCCAGCAGCGTTGGGTAAGGTGGCTGGCCAAGATCTGTGTAGTTCTCTACAAGTTCTTCTTGCACAGCCTTATGAGGAGCTATCTAACCTTTATACATTGTGGCTCTCTAATTCAAATTGTTACGTTGGGTCATAG

Protein sequence

MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKKLRKTSYTLVTDVKPRFVLSCLKDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFIGKEAALKFFKELTQSMGPDVKFRFRNVYETSLVMGTGTKISFSSLFSRARTGITFSSLFLASVSPVVGAGMEITFSSLILALASPTMGARTKITFFASASPVRLTCGGDRDGDYILVPVLGFGLVRGGNRDRDYILILAPSNGDKDEDYILVPVLGLDLVRMGTWAEITFLSLFFSSASPTVETGMEIIFSSPCLASALLVWDKDGGYILILVLGLDLTCSGDRDKNYIFIPVLGLCLVCNGDWDEDYILVSVLGLSLTRNDPNTKIPFTKGCTFIDINNEERTIQKAQIIMEPQVKAGHLILGMMKLVTSLLAQGDETFPAALGKVAGQDLCSSLQVLLAQPYEELSNLYTLWLSNSNCYVGS

Homology

[Close]

BLAST of CmaCh15G012460 vs. ExPASy TrEMBL
Match: A0A6J1I4H1 (uncharacterized protein LOC111469081 OS=Cucurbita maxima OX=3661 GN=LOC111469081 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 7.6e-78
Identity = 203/429 (47.32%), Postives = 204/429 (47.55%), Query Frame = 0


Query: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKKLRKTSYTLVTDVKPRFVLSCL 60
           MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKKLRKTSYTLVTDVKPRFVLSCL
Sbjct: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKKLRKTSYTLVTDVKPRFVLSCL 60

Query: 61  KDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFIGKEAAL 120
           KDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFIGKEAAL
Sbjct: 61  KDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFIGKEAAL 120

Query: 121 KFFKELTQSMGPDVKFRFRNVYETSLVMGTGTKISFSSLFSRARTGITFSSLFLASVSPV 180
           KFFKELTQSMGPDVKFRFRNVYE+                                    
Sbjct: 121 KFFKELTQSMGPDVKFRFRNVYES------------------------------------ 180

Query: 181 VGAGMEITFSSLILALASPTMGARTKITFFASASPVRLTCGGDRDGDYILVPVLGFGLVR 240
                                                                   G  R
Sbjct: 181 --------------------------------------------------------GTSR 210

Query: 241 GGNRDRDYILILAPSNGDKDEDYILVPVLGLDLVRMGTWAEITFLSLFFSSASPTVETGM 300
            G                                   TW                     
Sbjct: 241 AG----------------------------------ATWH-------------------- 210

Query: 301 EIIFSSPCLASALLVWDKDGGYILILVLGLDLTCSGDRDKNYIFIPVLGLCLVCNGDWDE 360
                        LVW                                            
Sbjct: 301 -------------LVW-------------------------------------------- 210

Query: 361 DYILVSVLGLSLTRNDPNTKIPFTKGCTFIDINNEERTIQKAQIIMEPQVKAGHLILGMM 420
                            NTKIPFTKGCTFIDINNEERTIQKAQIIMEPQVKAGHLILGMM
Sbjct: 361 ----------------KNTKIPFTKGCTFIDINNEERTIQKAQIIMEPQVKAGHLILGMM 210

Query: 421 KLVTSLLAQ 430
           KLVTSLLAQ
Sbjct: 421 KLVTSLLAQ 210

[Close]

BLAST of CmaCh15G012460 vs. ExPASy TrEMBL
Match: A0A6J1ELY0 (uncharacterized protein LOC111435747 OS=Cucurbita moschata OX=3662 GN=LOC111435747 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 5.7e-73
Identity = 192/429 (44.76%), Postives = 200/429 (46.62%), Query Frame = 0


Query: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKKLRKTSYTLVTDVKPRFVLSCL 60
           MALITSPPPQALTLGSQPFRTFAYTSIPK+PS LFQQKKLRKTSYTL TDVKPRFV SCL
Sbjct: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKRPSYLFQQKKLRKTSYTLATDVKPRFVSSCL 60

Query: 61  KDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFIGKEAAL 120
           KDGSVCSLDSCSNSPSEMVKK YECINEKKLKELSSY+SEDCLIEDSLFDEAFIGKEAAL
Sbjct: 61  KDGSVCSLDSCSNSPSEMVKKLYECINEKKLKELSSYMSEDCLIEDSLFDEAFIGKEAAL 120

Query: 121 KFFKELTQSMGPDVKFRFRNVYETSLVMGTGTKISFSSLFSRARTGITFSSLFLASVSPV 180
           KFFKELTQSMGPDVKFRFRNVYE+                  +R G+T+           
Sbjct: 121 KFFKELTQSMGPDVKFRFRNVYES----------------GASRAGVTWH---------- 180

Query: 181 VGAGMEITFSSLILALASPTMGARTKITFFASASPVRLTCGGDRDGDYILVPVLGFGLVR 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 210

Query: 241 GGNRDRDYILILAPSNGDKDEDYILVPVLGLDLVRMGTWAEITFLSLFFSSASPTVETGM 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 210

Query: 301 EIIFSSPCLASALLVWDKDGGYILILVLGLDLTCSGDRDKNYIFIPVLGLCLVCNGDWDE 360
                        LVW                                            
Sbjct: 301 -------------LVW-------------------------------------------- 210

Query: 361 DYILVSVLGLSLTRNDPNTKIPFTKGCTFIDINNEERTIQKAQIIMEPQVKAGHLILGMM 420
                            NTKIPFTKGCTFI INNE+RTIQKAQII+EPQVKAGHLILGMM
Sbjct: 361 ----------------KNTKIPFTKGCTFIHINNEQRTIQKAQIIIEPQVKAGHLILGMM 210

Query: 421 KLVTSLLAQ 430
           KLVTSLLAQ
Sbjct: 421 KLVTSLLAQ 210

[Close]

BLAST of CmaCh15G012460 vs. ExPASy TrEMBL
Match: A0A6J1DSR1 (uncharacterized protein LOC111023569 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111023569 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.2e-36
Identity = 92/153 (60.13%), Postives = 108/153 (70.59%), Query Frame = 0


Query: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKK---------LRKTSYTLVTDV 60
           MALI SPPP  ++LGSQ FR   YT++PK  S +FQQKK         +RKT+    TDV
Sbjct: 1   MALIRSPPP--ISLGSQSFRNLPYTALPKISSCVFQQKKTTVLKYGDWMRKTNKRSSTDV 60

Query: 61  KPRFVLSCLKDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDE 120
           K RFV SCL D S   LDS SN  SEM++ FY CINEK L+EL SYISEDC+IEDSLF E
Sbjct: 61  KLRFVPSCLPDDSDSCLDSNSNPSSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIE 120

Query: 121 AFIGKEAALKFFKELTQSMGPDVKFRFRNVYET 145
            F G++ AL+FF+ELTQSMG  VKFR  NVYE+
Sbjct: 121 PFQGRKEALEFFEELTQSMGRYVKFRILNVYES 151

[Close]

BLAST of CmaCh15G012460 vs. ExPASy TrEMBL
Match: A0A6J1DR56 (uncharacterized protein LOC111023569 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023569 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.2e-36
Identity = 92/153 (60.13%), Postives = 108/153 (70.59%), Query Frame = 0


Query: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKK---------LRKTSYTLVTDV 60
           MALI SPPP  ++LGSQ FR   YT++PK  S +FQQKK         +RKT+    TDV
Sbjct: 1   MALIRSPPP--ISLGSQSFRNLPYTALPKISSCVFQQKKTTVLKYGDWMRKTNKRSSTDV 60

Query: 61  KPRFVLSCLKDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDE 120
           K RFV SCL D S   LDS SN  SEM++ FY CINEK L+EL SYISEDC+IEDSLF E
Sbjct: 61  KLRFVPSCLPDDSDSCLDSNSNPSSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIE 120

Query: 121 AFIGKEAALKFFKELTQSMGPDVKFRFRNVYET 145
            F G++ AL+FF+ELTQSMG  VKFR  NVYE+
Sbjct: 121 PFQGRKEALEFFEELTQSMGRYVKFRILNVYES 151

[Close]

BLAST of CmaCh15G012460 vs. ExPASy TrEMBL
Match: A0A6J1DR56 (uncharacterized protein LOC111023569 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023569 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.3e-12
Identity = 52/100 (52.00%), Postives = 65/100 (65.00%), Query Frame = 0


Query: 380 KIPFTKGCTFIDINNEE-RTIQKAQIIMEPQVKAGHLILGMMKLVTSLLAQGDETFPA-- 439
           +IPF+KGCTFI+I NE+ R IQKAQII+EPQVKAGH IL ++KLVTSLL    +TFPA  
Sbjct: 168 EIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLL----DTFPAIP 227

Query: 440 ------------ALGKVAGQDLCSSLQVLLAQPYEELSNL 465
                        LGKVA +D+  +L   L +   E S+L
Sbjct: 228 EFYCRAAKIVSTTLGKVAIKDMYKALHASLGEFSGEPSSL 263

HSP 2 Score: 161.8 bits (408), Expect = 7.2e-36
Identity = 92/153 (60.13%), Postives = 108/153 (70.59%), Query Frame = 0


Query: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKK---------LRKTSYTLVTDV 60
           MALI SPPP  ++LGSQ FR   YT++PK  S +FQQKK         +RKT+    TDV
Sbjct: 1   MALIRSPPP--ISLGSQSFRNLPYTALPKISSCVFQQKKTTVLKYGDWMRKTNKRSSTDV 60

Query: 61  KPRFVLSCLKDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDE 120
           K RFV SCL D S   LDS SN  SEM++ FY CINEK L+EL SYISEDC+IEDSLF E
Sbjct: 61  KLRFVPSCLPDDSDSCLDSNSNPSSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIE 120

Query: 121 AFIGKEAALKFFKELTQSMGPDVKFRFRNVYET 145
            F G++ AL+FF+ELTQSMG  VKFR  NVYE+
Sbjct: 121 PFQGRKEALEFFEELTQSMGRYVKFRILNVYES 151

[Close]

BLAST of CmaCh15G012460 vs. NCBI nr
Match: KAG6579526.1 (hypothetical protein SDJN03_23974, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 428.7 bits (1101), Expect = 6.5e-116
Identity = 288/561 (51.34%), Postives = 312/561 (55.61%), Query Frame = 0


Query: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKKLRKTSYTLVTDVKPRFVLSCL 60
           M LITSPPPQALTLGSQPFRTFAYTSIPK+PS LFQQKKLRKTSYTL TDVK RFV SCL
Sbjct: 1   MTLITSPPPQALTLGSQPFRTFAYTSIPKRPSYLFQQKKLRKTSYTLATDVKTRFVSSCL 60

Query: 61  KDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFIGKEAAL 120
           KDGSVCSLDSCSNSPSEMVKK YECINEKKLKELSSY+SEDCLIEDSLFDEAFIGKEAAL
Sbjct: 61  KDGSVCSLDSCSNSPSEMVKKLYECINEKKLKELSSYMSEDCLIEDSLFDEAFIGKEAAL 120

Query: 121 KFFKELTQSMGPDVKFRFRNVYETSLVMGTGTKISFSSLFSRARTGITFSSLFLASVSPV 180
           KFFKELTQSMGPDVKFRFRNVYE+          S + +     T ITFS +FLA V PV
Sbjct: 121 KFFKELTQSMGPDVKFRFRNVYESG--------ASRAGVTWHLGTEITFSFVFLALVLPV 180

Query: 181 VG--------------------------------AGMEITFSSL-ILALASPTMGARTKI 240
           VG                                AG +  +  + +  L     G R   
Sbjct: 181 VGDRDRGYILVPILCLGLARDEDRDEDYIFILVFAGKDGDYILIPVFGLGLARSGGRDGD 240

Query: 241 TFFASASPVRLTCGGDRDGDYILVPVLGFGLVRGGNRDRDYILILA-----PSNGDKDED 300
                   + L  GGDRDGDYIL+PVLGFGLV  G+RD DYILIL        +GD+D D
Sbjct: 241 YIHILDFGLGLAYGGDRDGDYILIPVLGFGLVHSGDRDGDYILILVFGIGLACSGDRDGD 300

Query: 301 YILVPVLGLDLVR----------------------------------------------- 360
           Y +VPVLGLDL                                                 
Sbjct: 301 YTIVPVLGLDLAPSGNRDEDFILVHVLGLGLALGGDRDGDYTIVPVLGLDPLVGTGTKIS 360

Query: 361 --------------------------------MGTWAEITFLSLFFSSASPTVETGMEII 420
                                           +GT +EITFLSLFFSSASP V+T M+II
Sbjct: 361 FSSMFLASASLAVETGTEITFSSLFLALASPVVGTGSEITFLSLFFSSASPAVKTRMKII 420

Query: 421 FSSPCLASALLVWDKDGGYILILVLGLDL---TCSGDRDKNYIFIPVLGLCLVCNGDWDE 430
           FSSPCL  A LVW +          G  L    CS  R       P L         W +
Sbjct: 421 FSSPCLPLASLVWGQ----------GRRLHSPPCSWPR-------PHL--------QWGQ 480

[Close]

BLAST of CmaCh15G012460 vs. NCBI nr
Match: XP_022970084.1 (uncharacterized protein LOC111469081 [Cucurbita maxima])

HSP 1 Score: 301.2 bits (770), Expect = 1.6e-77
Identity = 203/429 (47.32%), Postives = 204/429 (47.55%), Query Frame = 0


Query: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKKLRKTSYTLVTDVKPRFVLSCL 60
           MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKKLRKTSYTLVTDVKPRFVLSCL
Sbjct: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKKLRKTSYTLVTDVKPRFVLSCL 60

Query: 61  KDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFIGKEAAL 120
           KDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFIGKEAAL
Sbjct: 61  KDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFIGKEAAL 120

Query: 121 KFFKELTQSMGPDVKFRFRNVYETSLVMGTGTKISFSSLFSRARTGITFSSLFLASVSPV 180
           KFFKELTQSMGPDVKFRFRNVYE+                                    
Sbjct: 121 KFFKELTQSMGPDVKFRFRNVYES------------------------------------ 180

Query: 181 VGAGMEITFSSLILALASPTMGARTKITFFASASPVRLTCGGDRDGDYILVPVLGFGLVR 240
                                                                   G  R
Sbjct: 181 --------------------------------------------------------GTSR 210

Query: 241 GGNRDRDYILILAPSNGDKDEDYILVPVLGLDLVRMGTWAEITFLSLFFSSASPTVETGM 300
            G                                   TW                     
Sbjct: 241 AG----------------------------------ATWH-------------------- 210

Query: 301 EIIFSSPCLASALLVWDKDGGYILILVLGLDLTCSGDRDKNYIFIPVLGLCLVCNGDWDE 360
                        LVW                                            
Sbjct: 301 -------------LVW-------------------------------------------- 210

Query: 361 DYILVSVLGLSLTRNDPNTKIPFTKGCTFIDINNEERTIQKAQIIMEPQVKAGHLILGMM 420
                            NTKIPFTKGCTFIDINNEERTIQKAQIIMEPQVKAGHLILGMM
Sbjct: 361 ----------------KNTKIPFTKGCTFIDINNEERTIQKAQIIMEPQVKAGHLILGMM 210

Query: 421 KLVTSLLAQ 430
           KLVTSLLAQ
Sbjct: 421 KLVTSLLAQ 210

[Close]

BLAST of CmaCh15G012460 vs. NCBI nr
Match: XP_022929026.1 (uncharacterized protein LOC111435747 [Cucurbita moschata])

HSP 1 Score: 285.0 bits (728), Expect = 1.2e-72
Identity = 192/429 (44.76%), Postives = 200/429 (46.62%), Query Frame = 0


Query: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKKLRKTSYTLVTDVKPRFVLSCL 60
           MALITSPPPQALTLGSQPFRTFAYTSIPK+PS LFQQKKLRKTSYTL TDVKPRFV SCL
Sbjct: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKRPSYLFQQKKLRKTSYTLATDVKPRFVSSCL 60

Query: 61  KDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFIGKEAAL 120
           KDGSVCSLDSCSNSPSEMVKK YECINEKKLKELSSY+SEDCLIEDSLFDEAFIGKEAAL
Sbjct: 61  KDGSVCSLDSCSNSPSEMVKKLYECINEKKLKELSSYMSEDCLIEDSLFDEAFIGKEAAL 120

Query: 121 KFFKELTQSMGPDVKFRFRNVYETSLVMGTGTKISFSSLFSRARTGITFSSLFLASVSPV 180
           KFFKELTQSMGPDVKFRFRNVYE+                  +R G+T+           
Sbjct: 121 KFFKELTQSMGPDVKFRFRNVYES----------------GASRAGVTWH---------- 180

Query: 181 VGAGMEITFSSLILALASPTMGARTKITFFASASPVRLTCGGDRDGDYILVPVLGFGLVR 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 210

Query: 241 GGNRDRDYILILAPSNGDKDEDYILVPVLGLDLVRMGTWAEITFLSLFFSSASPTVETGM 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 210

Query: 301 EIIFSSPCLASALLVWDKDGGYILILVLGLDLTCSGDRDKNYIFIPVLGLCLVCNGDWDE 360
                        LVW                                            
Sbjct: 301 -------------LVW-------------------------------------------- 210

Query: 361 DYILVSVLGLSLTRNDPNTKIPFTKGCTFIDINNEERTIQKAQIIMEPQVKAGHLILGMM 420
                            NTKIPFTKGCTFI INNE+RTIQKAQII+EPQVKAGHLILGMM
Sbjct: 361 ----------------KNTKIPFTKGCTFIHINNEQRTIQKAQIIIEPQVKAGHLILGMM 210

Query: 421 KLVTSLLAQ 430
           KLVTSLLAQ
Sbjct: 421 KLVTSLLAQ 210

[Close]

BLAST of CmaCh15G012460 vs. NCBI nr
Match: KAG7016986.1 (hypothetical protein SDJN02_22097, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275.4 bits (703), Expect = 9.3e-70
Identity = 142/157 (90.45%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKKLRKTSYTLVTDVKPRFVLSCL 60
           MALITSPPPQALTLGSQPFRTFAYTSIPK+PS LFQQKKLRKTSYTL TDVKPRFV SCL
Sbjct: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKRPSYLFQQKKLRKTSYTLATDVKPRFVSSCL 60

Query: 61  KDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFIGKEAAL 120
           KDGSVCSLDSCSNSPSEMVKK YECINEKKLKELSSY+SEDCLIEDSLFDEAFIGKEAAL
Sbjct: 61  KDGSVCSLDSCSNSPSEMVKKLYECINEKKLKELSSYMSEDCLIEDSLFDEAFIGKEAAL 120

Query: 121 KFFKELTQSMGPDVKFRFRNVYETSLVMGTGTKISFS 158
           KFFKELTQSMGPDVKFRFRNVYE    M   TKI F+
Sbjct: 121 KFFKELTQSMGPDVKFRFRNVYE----MWKNTKIPFT 153

[Close]

BLAST of CmaCh15G012460 vs. NCBI nr
Match: KAG7016986.1 (hypothetical protein SDJN02_22097, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 99.8 bits (247), Expect = 7.0e-17
Identity = 49/52 (94.23%), Postives = 51/52 (98.08%), Query Frame = 0


Query: 378 NTKIPFTKGCTFIDINNEERTIQKAQIIMEPQVKAGHLILGMMKLVTSLLAQ 430
           NTKIPFTKGCTFI INNE+RTIQKAQII+EPQVKAGHLILGMMKLVTSLLAQ
Sbjct: 147 NTKIPFTKGCTFIHINNEQRTIQKAQIIIEPQVKAGHLILGMMKLVTSLLAQ 198

HSP 2 Score: 275.0 bits (702), Expect = 1.2e-69
Identity = 189/429 (44.06%), Postives = 197/429 (45.92%), Query Frame = 0


Query: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQKKLRKTSYTLVTDVKPRFVLSCL 60
           MALITSPPPQALTLGSQPFRTFAYTSIPK+PS LFQQKKLRKTSYTL T+VKPRFVLSCL
Sbjct: 1   MALITSPPPQALTLGSQPFRTFAYTSIPKRPSYLFQQKKLRKTSYTLATNVKPRFVLSCL 60

Query: 61  KDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFIGKEAAL 120
           KDGS CSLDSCS SPSEMV+K YECINEKKLKELSSY+SEDCLIEDSLFDE FIGKEAAL
Sbjct: 61  KDGSGCSLDSCSKSPSEMVRKLYECINEKKLKELSSYMSEDCLIEDSLFDEPFIGKEAAL 120

Query: 121 KFFKELTQSMGPDVKFRFRNVYETSLVMGTGTKISFSSLFSRARTGITFSSLFLASVSPV 180
           KFF+ELTQSMG DVKFRFRNVYE+                                    
Sbjct: 121 KFFEELTQSMGRDVKFRFRNVYES------------------------------------ 180

Query: 181 VGAGMEITFSSLILALASPTMGARTKITFFASASPVRLTCGGDRDGDYILVPVLGFGLVR 240
                                                                   G  R
Sbjct: 181 --------------------------------------------------------GTSR 210

Query: 241 GGNRDRDYILILAPSNGDKDEDYILVPVLGLDLVRMGTWAEITFLSLFFSSASPTVETGM 300
            G                                   TW                     
Sbjct: 241 AG----------------------------------ATWH-------------------- 210

Query: 301 EIIFSSPCLASALLVWDKDGGYILILVLGLDLTCSGDRDKNYIFIPVLGLCLVCNGDWDE 360
                        LVW                                            
Sbjct: 301 -------------LVW-------------------------------------------- 210

Query: 361 DYILVSVLGLSLTRNDPNTKIPFTKGCTFIDINNEERTIQKAQIIMEPQVKAGHLILGMM 420
                            NTKIPFTKGCTFIDINNE+RTIQKAQII+EPQVKAGHLILGMM
Sbjct: 361 ----------------KNTKIPFTKGCTFIDINNEQRTIQKAQIIIEPQVKAGHLILGMM 210

Query: 421 KLVTSLLAQ 430
           KLVTSLLAQ
Sbjct: 421 KLVTSLLAQ 210

[Close]

BLAST of CmaCh15G012460 vs. TAIR 10
Match: AT5G41470.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 69.7 bits (169), Expect = 7.2e-12
Identity = 39/84 (46.43%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 65  VCSLDSCSNSPSEM-----VKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFIGKEAA 124
           V  LD  ++ P+++     V KFY  INEK   +LSS IS DC I+D  F + F GK+ A
Sbjct: 60  VSCLDRPNSRPNQISGYDAVMKFYSSINEKNQDQLSSCISSDCFIDDFSFPKPFRGKQEA 119

Query: 125 LKFFKELTQSMGPDVKFRFRNVYE 144
           ++FF+EL +SMG +VKF   NV E
Sbjct: 120 MEFFEELVKSMGQNVKFCVENVCE 143

[Close]

BLAST of CmaCh15G012460 vs. TAIR 10
Match: AT1G71480.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 53.1 bits (126), Expect = 7.0e-07
Identity = 23/68 (33.82%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 69  DSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFIGKEAALKFFKELTQ 128
           ++   S SE+V  FY  +N   L  ++  I++DC+ ED +F   F+G++A L FF +  +
Sbjct: 65  ETAPTSASEVVSSFYAAVNVHDLSSVTDLIAQDCVYEDLVFSSPFVGRKAILDFFGKFIE 124

Query: 129 SMGPDVKF 137
           S   D++F
Sbjct: 125 STSTDLQF 132

The following BLAST results are available for this feature:

BLAST of CmaCh15G012460 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh15G012460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I4H1	7.6e-78	47.32	uncharacterized protein LOC111469081 OS=Cucurbita maxima OX=3661 GN=LOC111469081...	[more]
A0A6J1ELY0	5.7e-73	44.76	uncharacterized protein LOC111435747 OS=Cucurbita moschata OX=3662 GN=LOC1114357...	[more]
A0A6J1DSR1	7.2e-36	60.13	uncharacterized protein LOC111023569 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DR56	7.2e-36	60.13	uncharacterized protein LOC111023569 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DR56	3.3e-12	52.00	uncharacterized protein LOC111023569 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

Pages

BLAST of CmaCh15G012460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579526.1	6.5e-116	51.34	hypothetical protein SDJN03_23974, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022970084.1	1.6e-77	47.32	uncharacterized protein LOC111469081 [Cucurbita maxima]	[more]
XP_022929026.1	1.2e-72	44.76	uncharacterized protein LOC111435747 [Cucurbita moschata]	[more]
KAG7016986.1	9.3e-70	90.45	hypothetical protein SDJN02_22097, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG7016986.1	7.0e-17	94.23	hypothetical protein SDJN02_22097, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmaCh15G012460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41470.1	7.2e-12	46.43	Nuclear transport factor 2 (NTF2) family protein	[more]
AT1G71480.1	7.0e-07	33.82	Nuclear transport factor 2 (NTF2) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.50		coord: 65..152 e-value: 1.1E-7 score: 33.7
None	No IPR available	PANTHER	PTHR33698	NUCLEAR TRANSPORT FACTOR 2 (NTF2)-LIKE PROTEIN	coord: 378..431
None	No IPR available	PANTHER	PTHR33698	NUCLEAR TRANSPORT FACTOR 2 (NTF2)-LIKE PROTEIN	coord: 28..144
None	No IPR available	PANTHER	PTHR33698:SF1	NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN	coord: 28..144
None	No IPR available	PANTHER	PTHR33698:SF1	NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN	coord: 378..431
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 76..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G012460.1	CmaCh15G012460.1	mRNA