CmaCh15G012190 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G012190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RNA-binding protein NOB1-like
Location	Cma_Chr15: 7713149 .. 7716392 (-)
RNA-Seq Expression	CmaCh15G012190
Synteny	CmaCh15G012190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTAGGGTTTTAGGGTTTCAATTAGGCATCAAACCCCCATCACTTGCTACAGGTATTCAGTTTGTTCTTCCTCTTCTTCTTGCGACAATGGAGAGCCCTTCTCCGGCTTCATGCTGGAGCAATGTCGTGAAATCTCAGCCGCCTCCGAAGCCTCAGCATCAAACTCCGACCTCCTCCGTCCAAGTATTCGCCGATAGCTGCAAGTCCAGTCAAGGCGTTGCTGTTGCCGTTGTTGATGCCAACGCCATTATCCAAGGGGGAGAGAAGCTTTCCACCTGCGCGGATAAGTTTGTTTCCGTTCCTGAGGTTTTGGATGAGGTTCGCGATCCTGTGTCTCGCCATAGACTCGCCTTCGTTCCCTTCTCTCTCGAATCCATGGATCCCTCTCCTGAAGCTCTCAATAAAGGTAGACTTCCAAATTCTAGTCCCTCTCTGCTCCTATGCGCTGGCTGTGTTGTTACTTGGAAGTTGAACAGGTTGTTGTTTATACAAGAAACGATCGGATGAAAGGTTTATAAGCTGTACTACCATTAGTGTGTGTTTGGATGGTTTTGAGAGCAATGTTTAAGTGCTTCGGAGTTCTTTTTTTAAGTGTTTCTAAAATTTTCAGAGTCATCTTGGCTTGCTAAATTTTATCTTTCGAGAATTACTTTTATTTGGATTAAATTTTCAGAGTAATTTTTATGTGTTTGTAACTCTGGCCTCTTATTAGAAAGAAATGTGAAGCATGCAAATTATAGTCTGCATTGTGGTGGCCTTTTGAAATTGGTCTTACTAGATACGGTCTTGATATCACCGTGTGCATTCCTAGTTTCCACCGTCATAATGCATTTTCTTTTGAATCTTACAGTAATCAAGTTTGCAAGGGCAACTGGTGACTTACAGACGCTTTCAGATGTTGATATTAAACTTATTGCCCTCACTTACACGTTGGAGACTCAGATCCATGGAACCAAACATCTCCGTGAGTGTCCTCCCCCTGTCCACATGGTTAATACAAAGAGGTTACCTGAGAAAGACATGCCGGGGTGGGGCTCTAACGTTCCTAATCTTGAAGAATGGGAAGCATTAGAGCAAGATGCTGATGCTCCGTCCAATTCCACATCAAAGATTCTTCCTTTGCAGGATTTAAACTTGAACATCATCCCTTCAGATGGTCAATCTGAAGATCTTTCACTAGAGCCCAATGATGGGAATTACTTGGAGCATCAAGATGAAACTGAGAGTGGATCAAGAAGATCAAGGAGATATCCTCCAAAGAAGCAGGAAATTAATATTGTAGGGAAGAAGATGGTGGCTGATGGAATTGATGCATCTCAGGGACAATGTGATGATAATGAGGGTGAGTGGACACCTGCCGTCAGTCGAAGTACTCAGAGAAGATATATTAGGAGGAAAGCCAGACGTGAATATTATGAGTCCTTAGCTGAAAAGGATGGTCTGCAAGATGTTGAAACCACAGATGCTGACATCCAAGTGGAACCTAAGAGTTCAGGTCAATCACAGGATAAAATCTCTGAACTGCCAAATTCTGGAAATTGGAATGAGAGTCAGATAGAAGAAGGGACAAACAATAATGAGAACCTCTCACAAATTTTGAAGCAGATGAGGCTGGAAGAAGATTCAGTAAATGATGCCCTTCATGTGGAAGGGCTTGGCACTTCCACGAAAGAAGAATCTGATGAAATTGAGGTGGAGGATGCTGTGGCTGTTGAAGGCACGGATTATACAGTAAAGGATGAAATGGAACACATAGAAGACTCGAGTCAGACTAATGAAAGTGTAGACACGTCAAATGTAGATGATCTTAGCAGTGATCAGAGTTGGATGCTCAGATCCTTGTCTGAATCAAGTGTAGCATGTGTAACTGGTGACTTTGCGATGCAGAATGTTCTTCTGCAAATGGGTTTACGATTGTTGGCTCCAGGGGGAATGCAGATCCGGCAACTACATAGGTATGTATATTTAGTGGGTGATTTGATATTACGTGGTCCTCCAAATTTTGTTAAATCATCACCAATTACCAATTGTTTATCAAACTTGATATTCAAAAATTACAACTAAATCATTCCTTTTCTGACCCACCTTCTAAGTTCTGAGAACCCCTCAACAATCTTCTTTCCAACCGATGATTTAGAAATGTTCGTTTTTTCTTACTCAAGCCAACCTTCAGGCCTATGAGTCAGTGTTAATTGCCTTGTATACTGGTCGAGTAGTTTGTTTGAGATAAATTCATTATGTTTAATGCGATTACACACTCAAATTTCACAATGTGTTGCTCAGGTGGATTTTGAAATGTCACGCCTGCTACAATGTCACAGCTGAAATTGGAAGGATCTTTTGCCCAAAGTGTGGAAATGGTGGAACTTTACGCAAGGTAGCTGTTACAGTTGGCGAGAATGGAGTTGTATTAGCGGCTCGTAAGCCAAGGATCACTCTGCGAGGCACAAAAGTGAGTATTTCTGATCGTTGCCCTTCAGAATTATTTAAAATTTCATTCACACTTTTAATTGTCTTTCTCAATGCTCATGTACTTACATATATTCGCTCATGAACAGTATGGTAGTCAATGGCTTGTTTTATATTTCAGATCCCTTCTCCCACAAAGCCGTTGATTAAGCATGGTTTCTAACCTTCTAGAAATGTGTGTTTTCCTTTTACGTACAGTTTTCACTTCCTCTACCGCAAGGTGGAAGAGATGCCATTACCAAAAATCTTGTCTTACGTGAAGATCAACTCCCGCAGAAATTTCTTCATCCCAAAACCAAGAAGAAAGTTAATAAGCAGGTTATTTTCCAATCAAAATTGCCTCACTCCAGTCTATCTTGGTTTATTTATGATCAGATTTTATTACATCACCATAACTTCATAGCCAAGTAGTAATCTCCATATTTCATTTTCAGGGAGATGACTTCTATCCCGTGGATAATTTCTTCAGCCACCACAATACTGATAAGAGGGCTCCTCTGCAGCCTCCTGTAAGGCAGGCTTTAGCAGTCTTTAATGGGAAGAGAAATCCGAATGATAACCATTACTCCCGATCTAAGCATAAGTAGACCCAAGTATTTATGGATTTCATGTTCATTACAGTTTTCATAACTACAAATTTTGATGAATATCTTTTGAGATTGGATTAATTTATTCAAATTGATAAGCTCAGCTTAAATGAGTTCAATTTTGTCCTGAATTTCCTTCAAAATACTTGTTCGATGTTACTTTATTTGTGAATATGTAATCCCAAT

mRNA sequence

TTTCTAGGGTTTTAGGGTTTCAATTAGGCATCAAACCCCCATCACTTGCTACAGGTATTCAGTTTGTTCTTCCTCTTCTTCTTGCGACAATGGAGAGCCCTTCTCCGGCTTCATGCTGGAGCAATGTCGTGAAATCTCAGCCGCCTCCGAAGCCTCAGCATCAAACTCCGACCTCCTCCGTCCAAGTATTCGCCGATAGCTGCAAGTCCAGTCAAGGCGTTGCTGTTGCCGTTGTTGATGCCAACGCCATTATCCAAGGGGGAGAGAAGCTTTCCACCTGCGCGGATAAGTTTGTTTCCGTTCCTGAGGTTTTGGATGAGGTTCGCGATCCTGTGTCTCGCCATAGACTCGCCTTCGTTCCCTTCTCTCTCGAATCCATGGATCCCTCTCCTGAAGCTCTCAATAAAGTAATCAAGTTTGCAAGGGCAACTGGTGACTTACAGACGCTTTCAGATGTTGATATTAAACTTATTGCCCTCACTTACACGTTGGAGACTCAGATCCATGGAACCAAACATCTCCGTGAGTGTCCTCCCCCTGTCCACATGGTTAATACAAAGAGGTTACCTGAGAAAGACATGCCGGGGTGGGGCTCTAACGTTCCTAATCTTGAAGAATGGGAAGCATTAGAGCAAGATGCTGATGCTCCGTCCAATTCCACATCAAAGATTCTTCCTTTGCAGGATTTAAACTTGAACATCATCCCTTCAGATGGTCAATCTGAAGATCTTTCACTAGAGCCCAATGATGGGAATTACTTGGAGCATCAAGATGAAACTGAGAGTGGATCAAGAAGATCAAGGAGATATCCTCCAAAGAAGCAGGAAATTAATATTGTAGGGAAGAAGATGGTGGCTGATGGAATTGATGCATCTCAGGGACAATGTGATGATAATGAGGGTGAGTGGACACCTGCCGTCAGTCGAAGTACTCAGAGAAGATATATTAGGAGGAAAGCCAGACGTGAATATTATGAGTCCTTAGCTGAAAAGGATGGTCTGCAAGATGTTGAAACCACAGATGCTGACATCCAAGTGGAACCTAAGAGTTCAGGTCAATCACAGGATAAAATCTCTGAACTGCCAAATTCTGGAAATTGGAATGAGAGTCAGATAGAAGAAGGGACAAACAATAATGAGAACCTCTCACAAATTTTGAAGCAGATGAGGCTGGAAGAAGATTCAGTAAATGATGCCCTTCATGTGGAAGGGCTTGGCACTTCCACGAAAGAAGAATCTGATGAAATTGAGGTGGAGGATGCTGTGGCTGTTGAAGGCACGGATTATACAGTAAAGGATGAAATGGAACACATAGAAGACTCGAGTCAGACTAATGAAAGTGTAGACACGTCAAATGTAGATGATCTTAGCAGTGATCAGAGTTGGATGCTCAGATCCTTGTCTGAATCAAGTGTAGCATGTGTAACTGGTGACTTTGCGATGCAGAATGTTCTTCTGCAAATGGGTTTACGATTGTTGGCTCCAGGGGGAATGCAGATCCGGCAACTACATAGGTGGATTTTGAAATGTCACGCCTGCTACAATGTCACAGCTGAAATTGGAAGGATCTTTTGCCCAAAGTGTGGAAATGGTGGAACTTTACGCAAGGTAGCTGTTACAGTTGGCGAGAATGGAGTTGTATTAGCGGCTCGTAAGCCAAGGATCACTCTGCGAGGCACAAAATTTTCACTTCCTCTACCGCAAGGTGGAAGAGATGCCATTACCAAAAATCTTGTCTTACGTGAAGATCAACTCCCGCAGAAATTTCTTCATCCCAAAACCAAGAAGAAAGTTAATAAGCAGGGAGATGACTTCTATCCCGTGGATAATTTCTTCAGCCACCACAATACTGATAAGAGGGCTCCTCTGCAGCCTCCTGTAAGGCAGGCTTTAGCAGTCTTTAATGGGAAGAGAAATCCGAATGATAACCATTACTCCCGATCTAAGCATAAGTAGACCCAAGTATTTATGGATTTCATGTTCATTACAGTTTTCATAACTACAAATTTTGATGAATATCTTTTGAGATTGGATTAATTTATTCAAATTGATAAGCTCAGCTTAAATGAGTTCAATTTTGTCCTGAATTTCCTTCAAAATACTTGTTCGATGTTACTTTATTTGTGAATATGTAATCCCAAT

Coding sequence (CDS)

ATGGAGAGCCCTTCTCCGGCTTCATGCTGGAGCAATGTCGTGAAATCTCAGCCGCCTCCGAAGCCTCAGCATCAAACTCCGACCTCCTCCGTCCAAGTATTCGCCGATAGCTGCAAGTCCAGTCAAGGCGTTGCTGTTGCCGTTGTTGATGCCAACGCCATTATCCAAGGGGGAGAGAAGCTTTCCACCTGCGCGGATAAGTTTGTTTCCGTTCCTGAGGTTTTGGATGAGGTTCGCGATCCTGTGTCTCGCCATAGACTCGCCTTCGTTCCCTTCTCTCTCGAATCCATGGATCCCTCTCCTGAAGCTCTCAATAAAGTAATCAAGTTTGCAAGGGCAACTGGTGACTTACAGACGCTTTCAGATGTTGATATTAAACTTATTGCCCTCACTTACACGTTGGAGACTCAGATCCATGGAACCAAACATCTCCGTGAGTGTCCTCCCCCTGTCCACATGGTTAATACAAAGAGGTTACCTGAGAAAGACATGCCGGGGTGGGGCTCTAACGTTCCTAATCTTGAAGAATGGGAAGCATTAGAGCAAGATGCTGATGCTCCGTCCAATTCCACATCAAAGATTCTTCCTTTGCAGGATTTAAACTTGAACATCATCCCTTCAGATGGTCAATCTGAAGATCTTTCACTAGAGCCCAATGATGGGAATTACTTGGAGCATCAAGATGAAACTGAGAGTGGATCAAGAAGATCAAGGAGATATCCTCCAAAGAAGCAGGAAATTAATATTGTAGGGAAGAAGATGGTGGCTGATGGAATTGATGCATCTCAGGGACAATGTGATGATAATGAGGGTGAGTGGACACCTGCCGTCAGTCGAAGTACTCAGAGAAGATATATTAGGAGGAAAGCCAGACGTGAATATTATGAGTCCTTAGCTGAAAAGGATGGTCTGCAAGATGTTGAAACCACAGATGCTGACATCCAAGTGGAACCTAAGAGTTCAGGTCAATCACAGGATAAAATCTCTGAACTGCCAAATTCTGGAAATTGGAATGAGAGTCAGATAGAAGAAGGGACAAACAATAATGAGAACCTCTCACAAATTTTGAAGCAGATGAGGCTGGAAGAAGATTCAGTAAATGATGCCCTTCATGTGGAAGGGCTTGGCACTTCCACGAAAGAAGAATCTGATGAAATTGAGGTGGAGGATGCTGTGGCTGTTGAAGGCACGGATTATACAGTAAAGGATGAAATGGAACACATAGAAGACTCGAGTCAGACTAATGAAAGTGTAGACACGTCAAATGTAGATGATCTTAGCAGTGATCAGAGTTGGATGCTCAGATCCTTGTCTGAATCAAGTGTAGCATGTGTAACTGGTGACTTTGCGATGCAGAATGTTCTTCTGCAAATGGGTTTACGATTGTTGGCTCCAGGGGGAATGCAGATCCGGCAACTACATAGGTGGATTTTGAAATGTCACGCCTGCTACAATGTCACAGCTGAAATTGGAAGGATCTTTTGCCCAAAGTGTGGAAATGGTGGAACTTTACGCAAGGTAGCTGTTACAGTTGGCGAGAATGGAGTTGTATTAGCGGCTCGTAAGCCAAGGATCACTCTGCGAGGCACAAAATTTTCACTTCCTCTACCGCAAGGTGGAAGAGATGCCATTACCAAAAATCTTGTCTTACGTGAAGATCAACTCCCGCAGAAATTTCTTCATCCCAAAACCAAGAAGAAAGTTAATAAGCAGGGAGATGACTTCTATCCCGTGGATAATTTCTTCAGCCACCACAATACTGATAAGAGGGCTCCTCTGCAGCCTCCTGTAAGGCAGGCTTTAGCAGTCTTTAATGGGAAGAGAAATCCGAATGATAACCATTACTCCCGATCTAAGCATAAGTAG

Protein sequence

MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEKLSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEALEQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRYPPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAEKDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMRLEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDTSNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQALAVFNGKRNPNDNHYSRSKHK

Homology

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BLAST of CmaCh15G012190 vs. ExPASy Swiss-Prot
Match: Q9FLL1 (RNA-binding NOB1-like protein OS=Arabidopsis thaliana OX=3702 GN=NOB1 PE=1 SV=1)

HSP 1 Score: 684.1 bits (1764), Expect = 1.5e-195
Identity = 360/625 (57.60%), Postives = 473/625 (75.68%), Query Frame = 0


Query: 4   PSPASCWSNVVKSQPPPKPQ-HQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEKLS 63
           P P S WS++VK  PP KP  +    +++     +CKS++G+++AVVDANAII+G + L+
Sbjct: 3   PKPTSMWSSIVKKDPPSKPPVNDGAPAAILGMVGNCKSTKGISIAVVDANAIIEGRQSLT 62

Query: 64  TCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTLSD 123
             ADKFV+VPEVL E+RDP SR RLAF+PF++++M+PSPE+L+KVIKFARATGDLQ+LSD
Sbjct: 63  NFADKFVTVPEVLSEIRDPASRRRLAFIPFTIDTMEPSPESLSKVIKFARATGDLQSLSD 122

Query: 124 VDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEALEQ 183
           VD+KLIAL+YTLE Q++GTK+LR+ PPP+  V  KRLPEKD+PGWGSNV NLEEWEALE 
Sbjct: 123 VDLKLIALSYTLEAQVYGTKNLRDVPPPIQTVRVKRLPEKDLPGWGSNVANLEEWEALEN 182

Query: 184 DADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRYPP 243
           + +  SN+ SKILPL+DLN+NII SD  SE  S+  +  N   H+++ + G ++ RRYPP
Sbjct: 183 ETEEKSNANSKILPLKDLNMNIIASDNVSEVGSVVSHTEN---HEEDVQEGGKKHRRYPP 242

Query: 244 KKQEINIVGKKMVADGIDASQGQCDDNE--GEWTPAVSRSTQRRYIRRKARREYYESLAE 303
           KK EI + G KMV +G+DASQGQ DD++   +W PAVSRST  +Y+RRKAR E+Y +LAE
Sbjct: 243 KKTEIKLEG-KMVVEGVDASQGQYDDDDDASDWRPAVSRSTHSKYLRRKARWEHYNALAE 302

Query: 304 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 363
           ++  +D                Q  DK      +   NE+  ++   N E++S ILK MR
Sbjct: 303 QEIQKD----------------QEADKARHTKEA---NETHAKDSGKNGEDISSILKDMR 362

Query: 364 LEEDSVNDALHVEGLGTSTK----EESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNE 423
           LEE+S+  AL  E   T+ +       D+I+ +  V  EG D      +E++E +S+  +
Sbjct: 363 LEEESLR-ALQEETEETNAEATLINGEDDIDHDIEVEAEGID-VANQALENLEIASEAED 422

Query: 424 SVDTSNV-DDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHR 483
           + + S++ DD SS+QSW LR+LSESSVAC+TGD+AMQNV+LQMGLRLLAPGGMQIRQLHR
Sbjct: 423 TFEASSIGDDGSSEQSWSLRALSESSVACITGDYAMQNVILQMGLRLLAPGGMQIRQLHR 482

Query: 484 WILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLP 543
           WILKCHACY VT EIGRIFCPKCGNGGTLRKVAVT+G NG ++AA KPRITLRGT++S+P
Sbjct: 483 WILKCHACYTVTPEIGRIFCPKCGNGGTLRKVAVTIGANGAIIAACKPRITLRGTQYSIP 542

Query: 544 LPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQP 603
           +P+GGR+AITKNL+LREDQLPQK LHP+TKKK +K GD+++  D+ F +H++D++APLQP
Sbjct: 543 MPKGGREAITKNLILREDQLPQKLLHPRTKKKASKPGDEYFVSDDVFLNHHSDRKAPLQP 602

Query: 604 PVRQALAVFNGKRNPNDNHYSRSKH 621
           PVR+A++VF+ KRNPNDNHYSRS H
Sbjct: 603 PVRKAMSVFSQKRNPNDNHYSRSMH 602

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BLAST of CmaCh15G012190 vs. ExPASy Swiss-Prot
Match: Q6VEU1 (RNA-binding protein NOB1 OS=Rattus norvegicus OX=10116 GN=Nob1 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.2e-29
Identity = 141/567 (24.87%), Postives = 225/567 (39.68%), Query Frame = 0


Query: 48  VVDANAIIQGGEKLSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKV 107
           V DA A ++    L        ++ EV+ E+RD  +R RLA +P+ L   +P PE +  V
Sbjct: 8   VADAGAFLRDA-PLQDIGKNIYTIREVVREIRDKATRRRLAVLPYELRFKEPFPEYVRLV 67

Query: 108 IKFARATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGW 167
            +F++ TGD  +LS  DI+++ALTY LE +  G  HL++ P  V + ++ + PE  +   
Sbjct: 68  TEFSKKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKKEPEKVKVSSSIQHPETPLHIS 127

Query: 168 GSNVPNLEEWEALEQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQ 227
           G ++P                 S SK L                               Q
Sbjct: 128 GFHLP-----------------SKSKAL-------------------------------Q 187

Query: 228 DETESGSRRSRRYPPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIR 287
           +  + G       PP                                             
Sbjct: 188 ETVDHG-------PP--------------------------------------------- 247

Query: 288 RKARREYYESLAEKDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTN 347
                         DG +++E +       P            LPN              
Sbjct: 248 -------------ADGSENLEFSSFMFWRNP------------LPNI------------- 307

Query: 348 NNENLSQILKQMRLEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEH 407
            +  L Q+L   R EE+   +           +EE DE+E  D    +G  +     ++ 
Sbjct: 308 -DHELQQLLIDGREEEEEEEE----------EEEEEDELEDSDD---DGGGWITPSNIKQ 367

Query: 408 IEDSSQTNESVDTSNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGG 467
           I+  S+           D+  D            V CVT DFAMQNVLLQMGL +LA  G
Sbjct: 368 IQHESEQ---------CDIPKD----------VQVGCVTTDFAMQNVLLQMGLHVLAVNG 400

Query: 468 MQIRQLHRWILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLA--ARKPRI 527
           M +R+   +IL+CH C+  T+++ R+FC  CGN  TL+KV+VT+ ++G +    +R P++
Sbjct: 428 MLVREARSYILRCHGCFKTTSDMNRVFCGHCGN-KTLKKVSVTINDDGTLHMHFSRNPKV 400

Query: 528 -TLRGTKFSLPLPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSH 587
              RG ++SLP P+GG+ A+  +L   + + PQ  L  K ++K N    D+    + F+ 
Sbjct: 488 LNPRGLRYSLPTPKGGKYAVNPHLT-EDQRFPQLRLSHKARQKTNVFAPDYIAGVSPFAE 400

Query: 588 HNTDKRAPLQPPVRQALAVFNGKRNPN 612
           ++   R+ +       L     + NPN
Sbjct: 548 NDISSRSAILQVRDSMLGAGRRRLNPN 400

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BLAST of CmaCh15G012190 vs. ExPASy Swiss-Prot
Match: Q3T042 (RNA-binding protein NOB1 OS=Bos taurus OX=9913 GN=NOB1 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.1e-28
Identity = 139/567 (24.51%), Postives = 223/567 (39.33%), Query Frame = 0


Query: 48  VVDANAIIQGGEKLSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKV 107
           V DA A +     L        ++  V+ E+RD  +R RLA +P+ L   +P PE +  V
Sbjct: 8   VADAGAFLLDA-ALQDIGKNIYTIRNVISEIRDKATRRRLAVLPYELRFKEPFPEYVRLV 67

Query: 108 IKFARATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGW 167
            +F++ TGD  +LS  DI+++ALTY LE +  G  HL++ P  V + ++ + PE  +   
Sbjct: 68  TEFSKKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKQEPEKVKVSSSIQHPETPLHVS 127

Query: 168 GSNVPNLEEWEALEQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQ 227
           G ++P                   SK  P ++   +  P+         EP D       
Sbjct: 128 GFHLP-------------------SKPKPPRETVEHRHPAS--------EPED------- 187

Query: 228 DETESGSRRSRRYPPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIR 287
              E  S    R P    +  +  ++++ DG     G+   NE E               
Sbjct: 188 --LEFSSFMFWRNPLPNIDCEL--QELLMDG-----GEDVPNEEE--------------- 247

Query: 288 RKARREYYESLAEKDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTN 347
                       E++GL + +  D+D                   + G W         +
Sbjct: 248 -----------DEENGLDERQDEDSD------------------DDGGGWIT------PS 307

Query: 348 NNENLSQILKQMRLEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEH 407
           N + + Q +KQ  + +D                                           
Sbjct: 308 NIKQIQQEMKQCAVPKD------------------------------------------- 367

Query: 408 IEDSSQTNESVDTSNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGG 467
                                             V CVT DFAMQNVLLQMGL +LA  G
Sbjct: 368 --------------------------------VRVGCVTTDFAMQNVLLQMGLHVLAVNG 403

Query: 468 MQIRQLHRWILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLA--ARKPRI 527
           M IR+   +IL+CH C+  T+++ R+FC  CGN  TL+KV+VTV ++G +    +R P++
Sbjct: 428 MLIREARSYILRCHGCFKTTSDMSRVFCAHCGN-KTLKKVSVTVSDDGTLHMHFSRNPKV 403

Query: 528 -TLRGTKFSLPLPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSH 587
              RG ++SLP P+GG+ AI  +L   + + PQ  L  K ++K +    D+    + F+ 
Sbjct: 488 LNPRGLRYSLPTPKGGKYAINPHLT-EDQRFPQLRLSRKARQKTDVFAPDYVAGVSPFAE 403

Query: 588 HNTDKRAPLQPPVRQALAVFNGKRNPN 612
           ++   R+         L     + NPN
Sbjct: 548 NDISSRSATLQVRDSTLGAGRRRLNPN 403

[Close]

BLAST of CmaCh15G012190 vs. ExPASy Swiss-Prot
Match: Q5RBB3 (RNA-binding protein NOB1 OS=Pongo abelii OX=9601 GN=NOB1 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 5.3e-28
Identity = 138/567 (24.34%), Postives = 221/567 (38.98%), Query Frame = 0


Query: 48  VVDANAIIQGGEKLSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKV 107
           V DA A ++    L        ++ EV+ E+RD  +R RLA +P+ L   +P PE +  V
Sbjct: 8   VADAGAFLRDA-ALQDIGKNIYTIREVVTEIRDKATRRRLAVLPYELRFKEPLPEYVRLV 67

Query: 108 IKFARATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGW 167
            +F++ TGD  +LS  DI+++ALTY LE +  G  HL++ P  V + ++ + PE  +   
Sbjct: 68  TEFSKKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKQEPQKVKVSSSIQHPETPLHIS 127

Query: 168 GSNVPNLEEWEALEQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQ 227
           G ++P+  +          P   T K  P  +      P + +        N    ++H+
Sbjct: 128 GFHLPSKPK----------PPQETEKGHPACE------PENLEFSSFMFWRNPLPNIDHE 187

Query: 228 DETESGSRRSRRYPPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIR 287
                            QE+ I                   + GE  P+           
Sbjct: 188 ----------------LQELLI-------------------DRGEDIPS----------- 247

Query: 288 RKARREYYESLAEKDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTN 347
                   +   E++G +D    D+D                   + G W         +
Sbjct: 248 --------DEEEEENGFED-RRDDSD------------------DDGGGWIT------PS 307

Query: 348 NNENLSQILKQMRLEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEH 407
           N + + Q L+Q  + ED                                           
Sbjct: 308 NIKQIQQELEQCDVPED------------------------------------------- 367

Query: 408 IEDSSQTNESVDTSNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGG 467
                                             V CVT DFAMQNVLLQMGL +LA  G
Sbjct: 368 --------------------------------VRVGCVTTDFAMQNVLLQMGLHVLAVNG 401

Query: 468 MQIRQLHRWILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLA--ARKPRI 527
           M IR+   +IL+CH C+  T+++ R+FC  CGN  TL+KV+VTV ++G +    +R P++
Sbjct: 428 MLIREARSYILRCHGCFKTTSDMSRVFCSHCGN-KTLKKVSVTVSDDGTLHMHFSRNPKV 401

Query: 528 -TLRGTKFSLPLPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSH 587
              RG ++SLP P+GG+ AI  +L   + + PQ  L  K ++K N    D+    + F  
Sbjct: 488 LNPRGLRYSLPTPKGGKYAINPHLT-EDQRFPQLRLSRKARQKTNVFAPDYVAGVSPFVE 401

Query: 588 HNTDKRAPLQPPVRQALAVFNGKRNPN 612
           ++   R+        +L     + NPN
Sbjct: 548 NDISSRSATLQVRDSSLGAGRRRLNPN 401

[Close]

BLAST of CmaCh15G012190 vs. ExPASy Swiss-Prot
Match: Q9ULX3 (RNA-binding protein NOB1 OS=Homo sapiens OX=9606 GN=NOB1 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 6.9e-28
Identity = 144/569 (25.31%), Postives = 219/569 (38.49%), Query Frame = 0


Query: 48  VVDANAIIQGGEKLSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKV 107
           V DA A ++    L        ++ EV+ E+RD  +R RLA +P+ L   +P PE +  V
Sbjct: 8   VADAGAFLRHA-ALQDIGKNIYTIREVVTEIRDKATRRRLAVLPYELRFKEPLPEYVRLV 67

Query: 108 IKFARATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGW 167
            +F++ TGD  +LS  DI+++ALTY LE +  G  HL++ P  V + ++ + PE  +   
Sbjct: 68  TEFSKKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKQEPQKVKVSSSIQHPETPLHIS 127

Query: 168 GSNVPNLEEWEALEQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQ 227
           G ++P   +          P   T K               G S   + EP         
Sbjct: 128 GFHLPYKPK----------PPQETEK---------------GHS---ACEP--------- 187

Query: 228 DETESGSRRSRRYPPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIR 287
           +  E  S    R P                                 P +    Q   I 
Sbjct: 188 ENLEFSSFMFWRNP--------------------------------LPNIDHELQELLID 247

Query: 288 RKARREYYESLAEKDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTN 347
           R       E   E++G +D +    D                   + G W         +
Sbjct: 248 RGEDVPSEEEEEEENGFEDRKDDSDD-------------------DGGGWIT------PS 307

Query: 348 NNENLSQILKQMRLEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEH 407
           N + + Q L+Q  + ED                                           
Sbjct: 308 NIKQIQQELEQCDVPED------------------------------------------- 367

Query: 408 IEDSSQTNESVDTSNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGG 467
                                             V C+T DFAMQNVLLQMGL +LA  G
Sbjct: 368 --------------------------------VRVGCLTTDFAMQNVLLQMGLHVLAVNG 402

Query: 468 MQIRQLHRWILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLA--ARKPRI 527
           M IR+   +IL+CH C+  T+++ R+FC  CGN  TL+KV+VTV ++G +    +R P++
Sbjct: 428 MLIREARSYILRCHGCFKTTSDMSRVFCSHCGN-KTLKKVSVTVSDDGTLHMHFSRNPKV 402

Query: 528 -TLRGTKFSLPLPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYP-VDNFFS 587
              RG ++SLP P+GG+ AI  +L   + + PQ  L  K ++K N    D+   V  F  
Sbjct: 488 LNPRGLRYSLPTPKGGKYAINPHLT-EDQRFPQLRLSQKARQKTNVFAPDYIAGVSPFVE 402

Query: 588 HHNTDKRAPLQPPVRQA-LAVFNGKRNPN 612
           +  + + A LQ  VR + L     + NPN
Sbjct: 548 NDISSRSATLQ--VRDSTLGAGRRRLNPN 402

[Close]

BLAST of CmaCh15G012190 vs. ExPASy TrEMBL
Match: A0A6J1I202 (RNA-binding protein NOB1-like OS=Cucurbita maxima OX=3661 GN=LOC111469120 PE=3 SV=1)

HSP 1 Score: 1221.1 bits (3158), Expect = 0.0e+00
Identity = 621/621 (100.00%), Postives = 621/621 (100.00%), Query Frame = 0


Query: 1   MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60
           MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK
Sbjct: 1   MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120
           LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY 240
           EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY
Sbjct: 181 EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY 240

Query: 241 PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300
           PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE
Sbjct: 241 PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300

Query: 301 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 360
           KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR
Sbjct: 301 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 360

Query: 361 LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT 420
           LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT
Sbjct: 361 LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT 420

Query: 421 SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480
           SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC
Sbjct: 421 SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480

Query: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540
           HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG
Sbjct: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540

Query: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 600
           RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA
Sbjct: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 600

Query: 601 LAVFNGKRNPNDNHYSRSKHK 622
           LAVFNGKRNPNDNHYSRSKHK
Sbjct: 601 LAVFNGKRNPNDNHYSRSKHK 621

[Close]

BLAST of CmaCh15G012190 vs. ExPASy TrEMBL
Match: A0A6J1EM36 (RNA-binding protein NOB1-like OS=Cucurbita moschata OX=3662 GN=LOC111435654 PE=4 SV=1)

HSP 1 Score: 1166.0 bits (3015), Expect = 0.0e+00
Identity = 596/621 (95.97%), Postives = 606/621 (97.58%), Query Frame = 0


Query: 1   MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60
           MESPSPASCWSNVVKSQP PKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK
Sbjct: 21  MESPSPASCWSNVVKSQPAPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 80

Query: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120
           LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL
Sbjct: 81  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 140

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 141 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 200

Query: 181 EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY 240
           EQDADAPSNSTS+ILPLQDLNLNIIPSDGQSEDLSLEP DGNYLEHQDETES S RSRRY
Sbjct: 201 EQDADAPSNSTSRILPLQDLNLNIIPSDGQSEDLSLEPKDGNYLEHQDETESASGRSRRY 260

Query: 241 PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300
           PPKK+EINI GKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE
Sbjct: 261 PPKKKEINIEGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 320

Query: 301 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 360
           KDGLQDVETTD +IQVEPKSSGQSQDKISELPNSGN NES+IEEGTNN+ENLSQILKQMR
Sbjct: 321 KDGLQDVETTDGNIQVEPKSSGQSQDKISELPNSGNLNESRIEEGTNNSENLSQILKQMR 380

Query: 361 LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT 420
           LEEDS+N  LHVEGLG STKEE DE E+EDAVAVEG+DYTVKDEMEHIED SQTNESVDT
Sbjct: 381 LEEDSLN-TLHVEGLGASTKEEFDESELEDAVAVEGSDYTVKDEMEHIEDLSQTNESVDT 440

Query: 421 SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480
           SNVDD+SSDQSW LRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC
Sbjct: 441 SNVDDVSSDQSWTLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 500

Query: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540
           HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG
Sbjct: 501 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 560

Query: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 600
           RDAITKNLVLREDQLPQKFLHPKTKKK NKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA
Sbjct: 561 RDAITKNLVLREDQLPQKFLHPKTKKKANKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 620

Query: 601 LAVFNGKRNPNDNHYSRSKHK 622
           LAVF+GKRNPNDNHYSRSKHK
Sbjct: 621 LAVFSGKRNPNDNHYSRSKHK 640

[Close]

BLAST of CmaCh15G012190 vs. ExPASy TrEMBL
Match: A0A6J1K514 (RNA-binding protein NOB1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490817 PE=3 SV=1)

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 553/621 (89.05%), Postives = 583/621 (93.88%), Query Frame = 0


Query: 1   MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60
           MESPSPASCWSNVVKSQP PKPQHQTPTS+VQVFADSCKSSQGVAVAVVDANAIIQGGEK
Sbjct: 1   MESPSPASCWSNVVKSQPAPKPQHQTPTSTVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120
           LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPF+LESMDPSPEALNKVIKFARATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFTLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKD+PGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDLPGWGSNVPNLEEWEAL 180

Query: 181 EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY 240
           EQDADAP ++TSKILPLQDLNLNI+PS GQSEDLSLE  D +  EHQDETESGSRRSRRY
Sbjct: 181 EQDADAPLDTTSKILPLQDLNLNIVPSGGQSEDLSLEHKDEHNSEHQDETESGSRRSRRY 240

Query: 241 PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300
           PPKK+EINI GKKMVADGIDASQGQ DDNEG+WTPAVSRSTQRRY+RRKARREYYE+LAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKARREYYEALAE 300

Query: 301 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 360
           KD  QDVETT+ D+ VE   SGQSQD+ISE P +GN N+ QI EGTNNNENLS+IL QMR
Sbjct: 301 KDSQQDVETTEGDVLVENNRSGQSQDQISE-PITGNGNDCQIAEGTNNNENLSEILNQMR 360

Query: 361 LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT 420
           LEEDS+N A H+EGLG   KEE D  EVE+ VAVEG + T KDEMEH+E SSQTNESVDT
Sbjct: 361 LEEDSLN-AFHMEGLGALKKEELDTSEVENIVAVEGMNDTAKDEMEHLEYSSQTNESVDT 420

Query: 421 SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480
           SN+DD+SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC
Sbjct: 421 SNIDDISSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480

Query: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540
           HACYNVTAEIG+IFCPKCGNGGTLRKVAVTVGENGVVLA+RKPRITLRGTKFSLPLPQGG
Sbjct: 481 HACYNVTAEIGKIFCPKCGNGGTLRKVAVTVGENGVVLASRKPRITLRGTKFSLPLPQGG 540

Query: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 600
           RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDF+ VD+FFSHHNTDKRAPLQPPVRQA
Sbjct: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFFAVDDFFSHHNTDKRAPLQPPVRQA 600

Query: 601 LAVFNGKRNPNDNHYSRSKHK 622
           LAVF+GKRNPNDNH+SRS HK
Sbjct: 601 LAVFSGKRNPNDNHFSRSHHK 619

[Close]

BLAST of CmaCh15G012190 vs. ExPASy TrEMBL
Match: A0A6J1H071 (RNA-binding protein NOB1-like OS=Cucurbita moschata OX=3662 GN=LOC111459243 PE=3 SV=1)

HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 553/621 (89.05%), Postives = 581/621 (93.56%), Query Frame = 0


Query: 1   MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60
           MESP PASCWSNVVKSQP PKPQHQTPTS+VQVFADSCKSSQGVAVAVVDANAIIQGGEK
Sbjct: 1   MESPYPASCWSNVVKSQPAPKPQHQTPTSTVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120
           LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPF+LESMDPSPEALNKVIKFARATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFTLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKD+PGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDLPGWGSNVPNLEEWEAL 180

Query: 181 EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY 240
           EQDADAP ++TSKILPLQDLNLNI+PSDGQSEDLSLE  D +  EH DETESGSRRSRRY
Sbjct: 181 EQDADAPLDTTSKILPLQDLNLNIVPSDGQSEDLSLEHKDEHNSEHPDETESGSRRSRRY 240

Query: 241 PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300
           PPKK+EINI GKKMVADGIDASQGQ DDNEG+WTPAVSRSTQRRY+RRKARREYYE+LAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKARREYYEALAE 300

Query: 301 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 360
           KD  QDVETTD D+ VE   SGQSQD+ISE P +GN N+ QI EGTNNNENLS+IL QMR
Sbjct: 301 KDSQQDVETTDGDVLVENNRSGQSQDQISE-PITGNGNDCQIAEGTNNNENLSEILNQMR 360

Query: 361 LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT 420
           LEEDS+N A H+EGL  S KEE D  EVE+ VA EG + T KDEMEH+E SSQTNESVDT
Sbjct: 361 LEEDSLN-AFHMEGLDASKKEELDISEVENIVAAEGINDTAKDEMEHLEYSSQTNESVDT 420

Query: 421 SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480
           SN+DD+SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC
Sbjct: 421 SNIDDISSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480

Query: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540
           HACYNVTAEIG+IFCPKCGNGGTLRKVAVTVGENGVVLA+RKPRITLRGTKFSLPLPQGG
Sbjct: 481 HACYNVTAEIGKIFCPKCGNGGTLRKVAVTVGENGVVLASRKPRITLRGTKFSLPLPQGG 540

Query: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 600
           RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDF+ VD+FFSHHNTDKRAPLQPPVRQA
Sbjct: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFFAVDDFFSHHNTDKRAPLQPPVRQA 600

Query: 601 LAVFNGKRNPNDNHYSRSKHK 622
           LAVF+GKRNPNDNHYSRS HK
Sbjct: 601 LAVFSGKRNPNDNHYSRSHHK 619

[Close]

BLAST of CmaCh15G012190 vs. ExPASy TrEMBL
Match: A0A0A0KML5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154760 PE=3 SV=1)

HSP 1 Score: 1073.5 bits (2775), Expect = 2.3e-310
Identity = 554/621 (89.21%), Postives = 583/621 (93.88%), Query Frame = 0


Query: 1   MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60
           ME+PSPASCWSNVVK+QP PKPQHQTP+SSVQVFADSCKSS+GVAVAVVDANAIIQGG+K
Sbjct: 1   METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60

Query: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120
           LS+ ADKFVSVPEVLDE+RDPVSRHRLAFVPF+LESMDPSP+ALNKVIKFARATGDLQTL
Sbjct: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY 240
           EQDAD PS  TSKILPLQDLNLNIIPSDGQSEDLSLE  D + LEH DETES SRRSRRY
Sbjct: 181 EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY 240

Query: 241 PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300
           PPKK+EINI GKKMVADGIDASQGQ DDNEG+WTPAVSRSTQRRY RRKARREYYESLAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300

Query: 301 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 360
           KD  QDVETT+ DI VE   SGQS+DKISELPN+GN NESQI EGTNNNEN+S+ILKQMR
Sbjct: 301 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 360

Query: 361 LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT 420
           LEEDS+N ALH   +  STKE SDE E E+AVAVEGT    KDEMEH+ED+SQTNESVD 
Sbjct: 361 LEEDSLN-ALH---MSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDM 420

Query: 421 SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480
           SNVDD+SSDQSWMLRSLSESSVACVTGD+AMQNVLLQMGLRLLAPGGMQIRQLHRWILKC
Sbjct: 421 SNVDDVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480

Query: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540
           HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG
Sbjct: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540

Query: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 600
           RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGD+F+ VD+FFSHHNTDKRAPLQPPVRQA
Sbjct: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQA 600

Query: 601 LAVFNGKRNPNDNHYSRSKHK 622
           LAVF+GKRNPNDNHYSRSKH+
Sbjct: 601 LAVFSGKRNPNDNHYSRSKHR 617

[Close]

BLAST of CmaCh15G012190 vs. NCBI nr
Match: XP_022970130.1 (RNA-binding protein NOB1-like [Cucurbita maxima])

HSP 1 Score: 1221.1 bits (3158), Expect = 0.0e+00
Identity = 621/621 (100.00%), Postives = 621/621 (100.00%), Query Frame = 0


Query: 1   MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60
           MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK
Sbjct: 1   MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120
           LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY 240
           EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY
Sbjct: 181 EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY 240

Query: 241 PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300
           PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE
Sbjct: 241 PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300

Query: 301 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 360
           KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR
Sbjct: 301 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 360

Query: 361 LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT 420
           LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT
Sbjct: 361 LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT 420

Query: 421 SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480
           SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC
Sbjct: 421 SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480

Query: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540
           HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG
Sbjct: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540

Query: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 600
           RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA
Sbjct: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 600

Query: 601 LAVFNGKRNPNDNHYSRSKHK 622
           LAVFNGKRNPNDNHYSRSKHK
Sbjct: 601 LAVFNGKRNPNDNHYSRSKHK 621

[Close]

BLAST of CmaCh15G012190 vs. NCBI nr
Match: XP_023550466.1 (RNA-binding protein NOB1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1168.3 bits (3021), Expect = 0.0e+00
Identity = 598/621 (96.30%), Postives = 606/621 (97.58%), Query Frame = 0


Query: 1   MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60
           MESPSPASCWSNVVKSQ  PKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK
Sbjct: 1   MESPSPASCWSNVVKSQSAPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120
           LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY 240
           EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEP DGNYLEHQDETES S RSRRY
Sbjct: 181 EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPKDGNYLEHQDETESASGRSRRY 240

Query: 241 PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300
           PPKK+EINI GKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300

Query: 301 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 360
           KDGLQDVETTD DIQVEPKSSGQSQDKISELPNSGN NES+IEEGTNN+ENLSQILKQMR
Sbjct: 301 KDGLQDVETTDGDIQVEPKSSGQSQDKISELPNSGNLNESRIEEGTNNSENLSQILKQMR 360

Query: 361 LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT 420
           LEEDS+N  LHVEGLG STKEE DE E+EDAVAVEG+DYTVKDEMEHIED SQTNESVDT
Sbjct: 361 LEEDSLN-TLHVEGLGASTKEEFDESELEDAVAVEGSDYTVKDEMEHIEDLSQTNESVDT 420

Query: 421 SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480
           SNVDD+SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC
Sbjct: 421 SNVDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480

Query: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540
           HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG
Sbjct: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540

Query: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 600
           RDAITKNLVLREDQLPQKFLHPKTKKK NKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA
Sbjct: 541 RDAITKNLVLREDQLPQKFLHPKTKKKANKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 600

Query: 601 LAVFNGKRNPNDNHYSRSKHK 622
           LAVF+GKRNPNDNHYSRSKHK
Sbjct: 601 LAVFSGKRNPNDNHYSRSKHK 620

[Close]

BLAST of CmaCh15G012190 vs. NCBI nr
Match: KAG6579499.1 (RNA-binding NOB1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1166.4 bits (3016), Expect = 0.0e+00
Identity = 596/621 (95.97%), Postives = 606/621 (97.58%), Query Frame = 0


Query: 1   MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60
           MESPSPASCWSNVVKSQP PKPQHQTPTSSVQ FADSCKSSQGVAVAVVDANAIIQGGEK
Sbjct: 1   MESPSPASCWSNVVKSQPAPKPQHQTPTSSVQFFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120
           LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY 240
           EQDADAPSNSTS+ILPLQDLNLNIIPSDGQSEDLSLEP DGNYLEHQDETES S RSRRY
Sbjct: 181 EQDADAPSNSTSRILPLQDLNLNIIPSDGQSEDLSLEPKDGNYLEHQDETESASGRSRRY 240

Query: 241 PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300
           PPKK+EINI GKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300

Query: 301 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 360
           KDGLQDVETTD +IQVEPKSSGQSQDKISELPNSGN NES+IEEGTNN+ENLSQILKQMR
Sbjct: 301 KDGLQDVETTDGNIQVEPKSSGQSQDKISELPNSGNLNESRIEEGTNNSENLSQILKQMR 360

Query: 361 LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT 420
           LEEDS+N  LHVEGLG STKEE DE E+EDAVAVEG+DYTVKDEMEHIED SQTNESVDT
Sbjct: 361 LEEDSLN-TLHVEGLGASTKEEFDESELEDAVAVEGSDYTVKDEMEHIEDLSQTNESVDT 420

Query: 421 SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480
           SNVDD+SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC
Sbjct: 421 SNVDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480

Query: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540
           HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG
Sbjct: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540

Query: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 600
           RDAITKNLVLREDQLPQKFLHPKTKKK NKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA
Sbjct: 541 RDAITKNLVLREDQLPQKFLHPKTKKKANKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 600

Query: 601 LAVFNGKRNPNDNHYSRSKHK 622
           LAVF+GKRNPNDNHYSRSKHK
Sbjct: 601 LAVFSGKRNPNDNHYSRSKHK 620

[Close]

BLAST of CmaCh15G012190 vs. NCBI nr
Match: XP_022928869.1 (RNA-binding protein NOB1-like [Cucurbita moschata] >KAG7016961.1 RNA-binding protein NOB1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1166.0 bits (3015), Expect = 0.0e+00
Identity = 596/621 (95.97%), Postives = 606/621 (97.58%), Query Frame = 0


Query: 1   MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60
           MESPSPASCWSNVVKSQP PKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK
Sbjct: 21  MESPSPASCWSNVVKSQPAPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 80

Query: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120
           LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL
Sbjct: 81  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 140

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 141 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 200

Query: 181 EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY 240
           EQDADAPSNSTS+ILPLQDLNLNIIPSDGQSEDLSLEP DGNYLEHQDETES S RSRRY
Sbjct: 201 EQDADAPSNSTSRILPLQDLNLNIIPSDGQSEDLSLEPKDGNYLEHQDETESASGRSRRY 260

Query: 241 PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300
           PPKK+EINI GKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE
Sbjct: 261 PPKKKEINIEGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 320

Query: 301 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 360
           KDGLQDVETTD +IQVEPKSSGQSQDKISELPNSGN NES+IEEGTNN+ENLSQILKQMR
Sbjct: 321 KDGLQDVETTDGNIQVEPKSSGQSQDKISELPNSGNLNESRIEEGTNNSENLSQILKQMR 380

Query: 361 LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT 420
           LEEDS+N  LHVEGLG STKEE DE E+EDAVAVEG+DYTVKDEMEHIED SQTNESVDT
Sbjct: 381 LEEDSLN-TLHVEGLGASTKEEFDESELEDAVAVEGSDYTVKDEMEHIEDLSQTNESVDT 440

Query: 421 SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480
           SNVDD+SSDQSW LRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC
Sbjct: 441 SNVDDVSSDQSWTLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 500

Query: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540
           HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG
Sbjct: 501 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 560

Query: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 600
           RDAITKNLVLREDQLPQKFLHPKTKKK NKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA
Sbjct: 561 RDAITKNLVLREDQLPQKFLHPKTKKKANKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 620

Query: 601 LAVFNGKRNPNDNHYSRSKHK 622
           LAVF+GKRNPNDNHYSRSKHK
Sbjct: 621 LAVFSGKRNPNDNHYSRSKHK 640

[Close]

BLAST of CmaCh15G012190 vs. NCBI nr
Match: XP_038875873.1 (RNA-binding protein NOB1 [Benincasa hispida])

HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 565/622 (90.84%), Postives = 589/622 (94.69%), Query Frame = 0


Query: 1   MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60
           MESPSPASCWSNVVKSQP PKPQ QTPTSSVQVFADSCKSS+GVAVAVVDANAIIQGG+K
Sbjct: 1   MESPSPASCWSNVVKSQPAPKPQLQTPTSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60

Query: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120
           LS+ ADKFVSVPEVLDE+RDPVSRHRLAFVPF+LESMDPSP+ALNKVIKFARATGDLQTL
Sbjct: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY 240
           EQDAD PSNSTSKILPLQDLNLNIIPSDGQSEDLSLE  D + LEHQDETESGS RSRRY
Sbjct: 181 EQDADDPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEHKDESNLEHQDETESGSTRSRRY 240

Query: 241 PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300
           PPKK+EINI GKKMVADGIDASQGQ DDNEG+WTPAVSRSTQRRY RRKARREYYESLAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300

Query: 301 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 360
           KD  QDVETTD DIQVE   SGQSQDKISELPN+G+ NE QIEEGTNNNENLS+ILKQMR
Sbjct: 301 KDCQQDVETTDGDIQVETNGSGQSQDKISELPNTGDGNEGQIEEGTNNNENLSEILKQMR 360

Query: 361 LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT 420
           LEEDS+N ALHV     STKEES E E E+AVAVEGT+ TVKDE+EH+ED+SQTNESVDT
Sbjct: 361 LEEDSLN-ALHV---SASTKEESGESEGENAVAVEGTNDTVKDELEHMEDASQTNESVDT 420

Query: 421 SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480
           SNVDD+SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC
Sbjct: 421 SNVDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480

Query: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540
           HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG
Sbjct: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540

Query: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNK-QGDDFYPVDNFFSHHNTDKRAPLQPPVRQ 600
           RDAITKNLVLREDQLPQKFLHPKTKKKV+K QGD+ + VD+FFSHHNTDKRAPLQPPVRQ
Sbjct: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVHKQQGDELFAVDDFFSHHNTDKRAPLQPPVRQ 600

Query: 601 ALAVFNGKRNPNDNHYSRSKHK 622
           ALAVF+GKRNPNDNHYSRSKHK
Sbjct: 601 ALAVFSGKRNPNDNHYSRSKHK 618

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BLAST of CmaCh15G012190 vs. TAIR 10
Match: AT5G41190.1 (CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1) Zn-ribbon like (InterPro:IPR014881), D-site 20S pre-rRNA nuclease (InterPro:IPR017117); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 684.1 bits (1764), Expect = 1.0e-196
Identity = 360/625 (57.60%), Postives = 473/625 (75.68%), Query Frame = 0


Query: 4   PSPASCWSNVVKSQPPPKPQ-HQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEKLS 63
           P P S WS++VK  PP KP  +    +++     +CKS++G+++AVVDANAII+G + L+
Sbjct: 3   PKPTSMWSSIVKKDPPSKPPVNDGAPAAILGMVGNCKSTKGISIAVVDANAIIEGRQSLT 62

Query: 64  TCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTLSD 123
             ADKFV+VPEVL E+RDP SR RLAF+PF++++M+PSPE+L+KVIKFARATGDLQ+LSD
Sbjct: 63  NFADKFVTVPEVLSEIRDPASRRRLAFIPFTIDTMEPSPESLSKVIKFARATGDLQSLSD 122

Query: 124 VDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEALEQ 183
           VD+KLIAL+YTLE Q++GTK+LR+ PPP+  V  KRLPEKD+PGWGSNV NLEEWEALE 
Sbjct: 123 VDLKLIALSYTLEAQVYGTKNLRDVPPPIQTVRVKRLPEKDLPGWGSNVANLEEWEALEN 182

Query: 184 DADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRYPP 243
           + +  SN+ SKILPL+DLN+NII SD  SE  S+  +  N   H+++ + G ++ RRYPP
Sbjct: 183 ETEEKSNANSKILPLKDLNMNIIASDNVSEVGSVVSHTEN---HEEDVQEGGKKHRRYPP 242

Query: 244 KKQEINIVGKKMVADGIDASQGQCDDNE--GEWTPAVSRSTQRRYIRRKARREYYESLAE 303
           KK EI + G KMV +G+DASQGQ DD++   +W PAVSRST  +Y+RRKAR E+Y +LAE
Sbjct: 243 KKTEIKLEG-KMVVEGVDASQGQYDDDDDASDWRPAVSRSTHSKYLRRKARWEHYNALAE 302

Query: 304 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 363
           ++  +D                Q  DK      +   NE+  ++   N E++S ILK MR
Sbjct: 303 QEIQKD----------------QEADKARHTKEA---NETHAKDSGKNGEDISSILKDMR 362

Query: 364 LEEDSVNDALHVEGLGTSTK----EESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNE 423
           LEE+S+  AL  E   T+ +       D+I+ +  V  EG D      +E++E +S+  +
Sbjct: 363 LEEESLR-ALQEETEETNAEATLINGEDDIDHDIEVEAEGID-VANQALENLEIASEAED 422

Query: 424 SVDTSNV-DDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHR 483
           + + S++ DD SS+QSW LR+LSESSVAC+TGD+AMQNV+LQMGLRLLAPGGMQIRQLHR
Sbjct: 423 TFEASSIGDDGSSEQSWSLRALSESSVACITGDYAMQNVILQMGLRLLAPGGMQIRQLHR 482

Query: 484 WILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLP 543
           WILKCHACY VT EIGRIFCPKCGNGGTLRKVAVT+G NG ++AA KPRITLRGT++S+P
Sbjct: 483 WILKCHACYTVTPEIGRIFCPKCGNGGTLRKVAVTIGANGAIIAACKPRITLRGTQYSIP 542

Query: 544 LPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQP 603
           +P+GGR+AITKNL+LREDQLPQK LHP+TKKK +K GD+++  D+ F +H++D++APLQP
Sbjct: 543 MPKGGREAITKNLILREDQLPQKLLHPRTKKKASKPGDEYFVSDDVFLNHHSDRKAPLQP 602

Query: 604 PVRQALAVFNGKRNPNDNHYSRSKH 621
           PVR+A++VF+ KRNPNDNHYSRS H
Sbjct: 603 PVRKAMSVFSQKRNPNDNHYSRSMH 602

The following BLAST results are available for this feature:

BLAST of CmaCh15G012190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLL1	1.5e-195	57.60	RNA-binding NOB1-like protein OS=Arabidopsis thaliana OX=3702 GN=NOB1 PE=1 SV=1	[more]
Q6VEU1	2.2e-29	24.87	RNA-binding protein NOB1 OS=Rattus norvegicus OX=10116 GN=Nob1 PE=2 SV=1	[more]
Q3T042	4.1e-28	24.51	RNA-binding protein NOB1 OS=Bos taurus OX=9913 GN=NOB1 PE=2 SV=1	[more]
Q5RBB3	5.3e-28	24.34	RNA-binding protein NOB1 OS=Pongo abelii OX=9601 GN=NOB1 PE=2 SV=1	[more]
Q9ULX3	6.9e-28	25.31	RNA-binding protein NOB1 OS=Homo sapiens OX=9606 GN=NOB1 PE=1 SV=1	[more]

BLAST of CmaCh15G012190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I202	0.0e+00	100.00	RNA-binding protein NOB1-like OS=Cucurbita maxima OX=3661 GN=LOC111469120 PE=3 S...	[more]
A0A6J1EM36	0.0e+00	95.97	RNA-binding protein NOB1-like OS=Cucurbita moschata OX=3662 GN=LOC111435654 PE=4...	[more]
A0A6J1K514	0.0e+00	89.05	RNA-binding protein NOB1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1H071	0.0e+00	89.05	RNA-binding protein NOB1-like OS=Cucurbita moschata OX=3662 GN=LOC111459243 PE=3...	[more]
A0A0A0KML5	2.3e-310	89.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154760 PE=3 SV=1	[more]

BLAST of CmaCh15G012190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022970130.1	0.0e+00	100.00	RNA-binding protein NOB1-like [Cucurbita maxima]	[more]
XP_023550466.1	0.0e+00	96.30	RNA-binding protein NOB1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6579499.1	0.0e+00	95.97	RNA-binding NOB1-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022928869.1	0.0e+00	95.97	RNA-binding protein NOB1-like [Cucurbita moschata] >KAG7016961.1 RNA-binding pro...	[more]
XP_038875873.1	0.0e+00	90.84	RNA-binding protein NOB1 [Benincasa hispida]	[more]

BLAST of CmaCh15G012190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41190.1	1.0e-196	57.60	CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1) Zn-ribbon like (InterPro:IPR0...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 342..362
None	No IPR available	GENE3D	3.40.50.1010		coord: 38..153 e-value: 4.1E-27 score: 96.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..425
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 306..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	PANTHER	PTHR12814:SF3	SUBFAMILY NOT NAMED	coord: 3..620
IPR033411	Ribonuclease, PIN domain	PFAM	PF17146	PIN_6	coord: 48..134 e-value: 5.7E-25 score: 87.6
IPR033411	Ribonuclease, PIN domain	CDD	cd09876	PIN_Nob1-like	coord: 58..145 e-value: 1.93424E-33 score: 121.851
IPR014881	Nin one binding (NOB1) Zn-ribbon-like	PFAM	PF08772	NOB1_Zn_bind	coord: 470..540 e-value: 8.8E-23 score: 80.2
IPR036283	NOB1 zinc finger-like superfamily	GENE3D	6.20.210.10		coord: 464..539 e-value: 4.0E-22 score: 79.8
IPR036283	NOB1 zinc finger-like superfamily	SUPERFAMILY	144206	NOB1 zinc finger-like	coord: 470..533
IPR017117	Ribonuclease Nob1, eukaryote	PIRSF	PIRSF037125	Nob1	coord: 27..621 e-value: 3.6E-129 score: 429.6
IPR039907	RNA-binding protein NOB1	PANTHER	PTHR12814	RNA-BINDING PROTEIN NOB1	coord: 3..620

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G012190.1	CmaCh15G012190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000469	cleavage involved in rRNA processing
biological_process	GO:0009553	embryo sac development
biological_process	GO:0030490	maturation of SSU-rRNA
biological_process	GO:0009555	pollen development
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0042274	ribosomal small subunit biogenesis
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0030688	preribosome, small subunit precursor
molecular_function	GO:0004521	endoribonuclease activity
molecular_function	GO:0046872	metal ion binding