CmaCh15G011710 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G011710
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Cma_Chr15: 7422344 .. 7423232 (+)
RNA-Seq Expression	CmaCh15G011710
Synteny	CmaCh15G011710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCAGGTGGAGATGTGAGTTCGGCATAGACATATCTTTTACTGGGACAAGGTTCATCGTAATCATCTGTTATATTTTCCTTCTCTTTTCGTTATATTCTAATGGTTCGTTTAGCATTATTTTCCTAATGAAACCATGCATCTTTGCAGCTAACTCCAAGTATGGCCATCTACGACACAATGCAGAGCTTGCAGAGTCCTGTAGCTACCCATTGCGTGGGTTATGCCTATAATCTGGCAGCCTTTCTTTTAGCAGCTGGAGAAAAGGTAAATACTTCAATTTGTATTGTCAAACAAAATTTAGTGCCGTAAGGCAGTAGGTGTTGCTCAAACTATGACTTCGGAATTTGTAGGGAGTTCTTCAGAATGGTAAAAGTGACCCCTATTTTTCAGTCGGTTAAATCATTTTAACTCCATCAAGAAATATTTTTTTGTGACTTGATAAACAAATCTCAACCCTTTATTTGCATCCAATAAACTTGGAAATGCTCATTTCTTGTGCCTAGCTGCCCCCAATGTACGGATTTTATGCAATTTTCATGCTTTTAATGAAAACCGTCTCCCCGCTTGTTAGCCTCCTATCTGTGTGGTTGAACCTACTTTCTTGTTTCTTCTTTTTCTCTTATAAATCAAACCACACATTTCCTTGTTTAGGGTAACCGCTCTGCCATGCCTCTATCAAGAATTGCTTTGCAACCCCCTTCCGGAGCTGCACGTGGCCAGGTATCATTAATTTGTTATATAATGTCATGCAAATTGATCACATATGCCCGTCTTAAGTTTTGAACATTTTGTTCTGATACATTCTTGTTTGAAAATCCTTTTGGAAGGCTGATGACATTCGAAATGAAGCAAATGAGCTCTTGAGAATCATGGATTATCTTTAA

mRNA sequence

ATGGCCCAGCTAACTCCAAGTATGGCCATCTACGACACAATGCAGAGCTTGCAGAGTCCTGTAGCTACCCATTGCGTGGGTTATGCCTATAATCTGGCAGCCTTTCTTTTAGCAGCTGGAGAAAAGGGTAACCGCTCTGCCATGCCTCTATCAAGAATTGCTTTGCAACCCCCTTCCGGAGCTGCACGTGGCCAGGCTGATGACATTCGAAATGAAGCAAATGAGCTCTTGAGAATCATGGATTATCTTTAA

Coding sequence (CDS)

ATGGCCCAGCTAACTCCAAGTATGGCCATCTACGACACAATGCAGAGCTTGCAGAGTCCTGTAGCTACCCATTGCGTGGGTTATGCCTATAATCTGGCAGCCTTTCTTTTAGCAGCTGGAGAAAAGGGTAACCGCTCTGCCATGCCTCTATCAAGAATTGCTTTGCAACCCCCTTCCGGAGCTGCACGTGGCCAGGCTGATGACATTCGAAATGAAGCAAATGAGCTCTTGAGAATCATGGATTATCTTTAA

Protein sequence

MAQLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAARGQADDIRNEANELLRIMDYL

Homology

[Close]

BLAST of CmaCh15G011710 vs. ExPASy Swiss-Prot
Match: Q9XJ36 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR2 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 4.9e-30
Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           LTPS+AIYDTM+SL+SPV THCVG AYNLA FLLAAGEKG+R AMPLSRIALQ P+GAAR
Sbjct: 141 LTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAAR 200

Query: 64  GQADDIRNEANELLRIMDYL 84
           GQADDI+NEA EL RI DYL
Sbjct: 201 GQADDIQNEAKELSRIRDYL 220

[Close]

BLAST of CmaCh15G011710 vs. ExPASy Swiss-Prot
Match: Q8YP43 (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=clpP3 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.8e-16
Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           +T  +AIYDTMQ ++S V T CVG A ++ +FLLAAG KG R A+P SRI +  PSG  R
Sbjct: 74  VTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPHSRIMIHQPSGGTR 133

Query: 64  GQADDIRNEANELLRIMDYL 84
           GQA DI  EA E+LRI   L
Sbjct: 134 GQATDIEIEAREILRIRHQL 153

[Close]

BLAST of CmaCh15G011710 vs. ExPASy Swiss-Prot
Match: Q8DJZ9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.4e-16
Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           +T  MAIYDTMQ ++S V T CVG A ++ +FLLAAG KG R A+P SRI +  PSG  R
Sbjct: 74  VTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTR 133

Query: 64  GQADDIRNEANELLRI 80
           GQA DI  EA E+LR+
Sbjct: 134 GQATDIEIEAREILRV 149

[Close]

BLAST of CmaCh15G011710 vs. ExPASy Swiss-Prot
Match: Q3MDK7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.4e-16
Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           +T  +AIYDTMQ ++S V T CVG A ++ +FLLAAG KG R A+P SRI +  PSG  R
Sbjct: 74  VTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTR 133

Query: 64  GQADDIRNEANELLRIMDYL 84
           GQA DI  EA E+LRI   L
Sbjct: 134 GQATDIEIEAREILRIRHQL 153

[Close]

BLAST of CmaCh15G011710 vs. ExPASy Swiss-Prot
Match: A8ZXB7 (ATP-dependent Clp protease proteolytic subunit OS=Desulfococcus oleovorans (strain DSM 6200 / JCM 39069 / Hxd3) OX=96561 GN=clpP PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.4e-16
Identity = 42/81 (51.85%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 3   QLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAA 62
           +++  MAIYDTMQ ++S +AT C+G+A ++ AFLLAAG KG R ++P SRI +  P G A
Sbjct: 70  KVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMIHQPMGGA 129

Query: 63  RGQADDIRNEANELLRIMDYL 84
           +GQA DI  +A E+LR+ D L
Sbjct: 130 QGQASDIAIQAKEILRMKDIL 150

[Close]

BLAST of CmaCh15G011710 vs. ExPASy TrEMBL
Match: A0A6A5MD20 (ATP-dependent Clp protease proteolytic subunit OS=Lupinus albus OX=3870 GN=Lal_00016826 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.4e-32
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQ P+GAAR
Sbjct: 173 LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAAR 232

Query: 64  GQADDIRNEANELLRIMDYL 84
           GQADDI+NEANELLRI DYL
Sbjct: 233 GQADDIQNEANELLRIRDYL 252

[Close]

BLAST of CmaCh15G011710 vs. ExPASy TrEMBL
Match: A0A6A4QL77 (ATP-dependent Clp protease proteolytic subunit OS=Lupinus albus OX=3870 GN=Lalb_Chr05g0225301 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.4e-32
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQ P+GAAR
Sbjct: 146 LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAAR 205

Query: 64  GQADDIRNEANELLRIMDYL 84
           GQADDI+NEANELLRI DYL
Sbjct: 206 GQADDIQNEANELLRIRDYL 225

[Close]

BLAST of CmaCh15G011710 vs. ExPASy TrEMBL
Match: A0A4P1RF37 (ATP-dependent Clp protease proteolytic subunit OS=Lupinus angustifolius OX=3871 GN=TanjilG_32259 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.4e-32
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQ P+GAAR
Sbjct: 173 LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAAR 232

Query: 64  GQADDIRNEANELLRIMDYL 84
           GQADDI+NEANELLRI DYL
Sbjct: 233 GQADDIQNEANELLRIRDYL 252

[Close]

BLAST of CmaCh15G011710 vs. ExPASy TrEMBL
Match: A0A4Y1RGV5 (ATP-dependent Clp protease proteolytic subunit OS=Prunus dulcis OX=3755 GN=Prudu_014028 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-32
Identity = 75/83 (90.36%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1   MAQLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSG 60
           MA LTPSMAIYDTMQSL+SPV THCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQ P+G
Sbjct: 69  MALLTPSMAIYDTMQSLKSPVGTHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAG 128

Query: 61  AARGQADDIRNEANELLRIMDYL 84
           AARGQADDI+NEANELLRI DYL
Sbjct: 129 AARGQADDIQNEANELLRIKDYL 151

[Close]

BLAST of CmaCh15G011710 vs. ExPASy TrEMBL
Match: A0A6P5NIV9 (ATP-dependent Clp protease proteolytic subunit OS=Arachis duranensis OX=130453 GN=LOC107487651 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.2e-32
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           LTPS+AIYDTMQSLQSPV THCVGYAYNLAAFLLAAGEKGNR AMPLSR+ALQ P+GAAR
Sbjct: 149 LTPSLAIYDTMQSLQSPVTTHCVGYAYNLAAFLLAAGEKGNRFAMPLSRVALQSPAGAAR 208

Query: 64  GQADDIRNEANELLRIMDYL 84
           GQADDIRNEANELLRI DYL
Sbjct: 209 GQADDIRNEANELLRIRDYL 228

[Close]

BLAST of CmaCh15G011710 vs. NCBI nr
Match: XP_023551138.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.8 bits (382), Expect = 2.7e-33
Identity = 76/80 (95.00%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           LTPSMAIYDTMQSLQSPVATHCVGYAYNLA FLLAAGEKGNRSAMPLSRIALQPPSGAAR
Sbjct: 117 LTPSMAIYDTMQSLQSPVATHCVGYAYNLAVFLLAAGEKGNRSAMPLSRIALQPPSGAAR 176

Query: 64  GQADDIRNEANELLRIMDYL 84
           GQ D+IRNEANELLRI DYL
Sbjct: 177 GQTDEIRNEANELLRIRDYL 196

[Close]

BLAST of CmaCh15G011710 vs. NCBI nr
Match: XP_028762735.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-like isoform X1 [Prosopis alba] >XP_028762767.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-like isoform X1 [Prosopis alba])

HSP 1 Score: 148.7 bits (374), Expect = 2.3e-32
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQ P+G+AR
Sbjct: 146 LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSAR 205

Query: 64  GQADDIRNEANELLRIMDYL 84
           GQADDIRNEANELLRI DYL
Sbjct: 206 GQADDIRNEANELLRIRDYL 225

[Close]

BLAST of CmaCh15G011710 vs. NCBI nr
Match: XP_028762736.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-like isoform X2 [Prosopis alba] >XP_028762768.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-like isoform X2 [Prosopis alba])

HSP 1 Score: 148.7 bits (374), Expect = 2.3e-32
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQ P+G+AR
Sbjct: 145 LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSAR 204

Query: 64  GQADDIRNEANELLRIMDYL 84
           GQADDIRNEANELLRI DYL
Sbjct: 205 GQADDIRNEANELLRIRDYL 224

[Close]

BLAST of CmaCh15G011710 vs. NCBI nr
Match: KAF1872524.1 (hypothetical protein Lal_00016826 [Lupinus albus])

HSP 1 Score: 148.3 bits (373), Expect = 3.0e-32
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQ P+GAAR
Sbjct: 173 LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAAR 232

Query: 64  GQADDIRNEANELLRIMDYL 84
           GQADDI+NEANELLRI DYL
Sbjct: 233 GQADDIQNEANELLRIRDYL 252

[Close]

BLAST of CmaCh15G011710 vs. NCBI nr
Match: KAE9614187.1 (putative endopeptidase Clp [Lupinus albus])

HSP 1 Score: 148.3 bits (373), Expect = 3.0e-32
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQ P+GAAR
Sbjct: 146 LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAAR 205

Query: 64  GQADDIRNEANELLRIMDYL 84
           GQADDI+NEANELLRI DYL
Sbjct: 206 GQADDIQNEANELLRIRDYL 225

[Close]

BLAST of CmaCh15G011710 vs. TAIR 10
Match: AT1G12410.1 (CLP protease proteolytic subunit 2 )

HSP 1 Score: 131.3 bits (329), Expect = 3.5e-31
Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           LTPS+AIYDTM+SL+SPV THCVG AYNLA FLLAAGEKG+R AMPLSRIALQ P+GAAR
Sbjct: 141 LTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAAR 200

Query: 64  GQADDIRNEANELLRIMDYL 84
           GQADDI+NEA EL RI DYL
Sbjct: 201 GQADDIQNEAKELSRIRDYL 220

[Close]

BLAST of CmaCh15G011710 vs. TAIR 10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7 )

HSP 1 Score: 74.7 bits (182), Expect = 3.9e-14
Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           +T  +AIYDTMQ ++SP++T C+G A ++A+ LLAAG KG R ++P + + +  PSG   
Sbjct: 100 VTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYS 159

Query: 64  GQADDIRNEANELLRIMDYL 84
           GQA DI     +++R+ D L
Sbjct: 160 GQAKDITIHTKQIVRVWDAL 179

[Close]

BLAST of CmaCh15G011710 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 70.5 bits (171), Expect = 7.3e-13
Identity = 36/74 (48.65%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           +T  MAI+DTM+ ++  V+T CVG A ++ AFLL+AG KG R ++P SRI +  P G A+
Sbjct: 166 VTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQ 225

Query: 64  GQADDIRNEANELL 78
           G   DI  +ANE+L
Sbjct: 226 GGQTDIDIQANEML 239

[Close]

BLAST of CmaCh15G011710 vs. TAIR 10
Match: AT4G17040.1 (CLP protease R subunit 4 )

HSP 1 Score: 63.9 bits (154), Expect = 6.8e-11
Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 5   TPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAARG 64
           T + AIYD M  ++ P+ T CVG A+  AA LL AG KGNRSA+P S I ++ P    +G
Sbjct: 166 TEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQG 225

Query: 65  QADDIRNEANELLRI 80
           QA D+     E+  I
Sbjct: 226 QATDVEIARKEIKHI 240

[Close]

BLAST of CmaCh15G011710 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 )

HSP 1 Score: 62.4 bits (150), Expect = 2.0e-10
Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 0


Query: 4   LTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAAR 63
           L+ +MAIYD +Q +++ V+T  +G A + A+ +L AG KG R AMP +RI +  P G A 
Sbjct: 131 LSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGAS 190

Query: 64  GQADDIRNEANELL 78
           GQA D+  +A E++
Sbjct: 191 GQAIDVEIQAKEVM 204

The following BLAST results are available for this feature:

BLAST of CmaCh15G011710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XJ36	4.9e-30	82.50	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ...	[more]
Q8YP43	1.8e-16	56.25	Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Nostoc sp. (strain ...	[more]
Q8DJZ9	2.4e-16	57.89	ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatu...	[more]
Q3MDK7	2.4e-16	56.25	ATP-dependent Clp protease proteolytic subunit 2 OS=Trichormus variabilis (strai...	[more]
A8ZXB7	2.4e-16	51.85	ATP-dependent Clp protease proteolytic subunit OS=Desulfococcus oleovorans (stra...	[more]

BLAST of CmaCh15G011710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A5MD20	1.4e-32	93.75	ATP-dependent Clp protease proteolytic subunit OS=Lupinus albus OX=3870 GN=Lal_0...	[more]
A0A6A4QL77	1.4e-32	93.75	ATP-dependent Clp protease proteolytic subunit OS=Lupinus albus OX=3870 GN=Lalb_...	[more]
A0A4P1RF37	1.4e-32	93.75	ATP-dependent Clp protease proteolytic subunit OS=Lupinus angustifolius OX=3871 ...	[more]
A0A4Y1RGV5	2.4e-32	90.36	ATP-dependent Clp protease proteolytic subunit OS=Prunus dulcis OX=3755 GN=Prudu...	[more]
A0A6P5NIV9	4.2e-32	91.25	ATP-dependent Clp protease proteolytic subunit OS=Arachis duranensis OX=130453 G...	[more]

BLAST of CmaCh15G011710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551138.1	2.7e-33	95.00	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-...	[more]
XP_028762735.1	2.3e-32	93.75	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-...	[more]
XP_028762736.1	2.3e-32	93.75	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-...	[more]
KAF1872524.1	3.0e-32	93.75	hypothetical protein Lal_00016826 [Lupinus albus]	[more]
KAE9614187.1	3.0e-32	93.75	putative endopeptidase Clp [Lupinus albus]	[more]

BLAST of CmaCh15G011710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12410.1	3.5e-31	82.50	CLP protease proteolytic subunit 2	[more]
AT5G23140.1	3.9e-14	43.75	nuclear-encoded CLP protease P7	[more]
AT1G02560.1	7.3e-13	48.65	nuclear encoded CLP protease 5	[more]
AT4G17040.1	6.8e-11	45.33	CLP protease R subunit 4	[more]
AT5G45390.1	2.0e-10	43.24	CLP protease P4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 23..40 score: 48.75 coord: 44..63 score: 34.25
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 5..83 e-value: 2.93703E-32 score: 107.913
None	No IPR available	GENE3D	3.90.226.10		coord: 1..83 e-value: 4.4E-24 score: 87.1
None	No IPR available	PANTHER	PTHR10381:SF46	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 2, CHLOROPLASTIC	coord: 3..83
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 4..81 e-value: 1.3E-24 score: 87.1
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 3..83
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 5..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G011710.1	CmaCh15G011710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity