CmaCh15G011560 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh15G011560
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationCma_Chr15: 7343287 .. 7345532 (-)
RNA-Seq ExpressionCmaCh15G011560
SyntenyCmaCh15G011560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGTGCTATAGTGGTAGCACGTGGTACAAAATCTGGAACCTTATACACCACTACAGGGTGTATGAACATAGCTGCTGTTGCTGAGAGTGCTTCAAATTCAAGTCTATGGAACAATAGACTTGGACATATGAGCGTGAAAGAAATGAAGATGCTGACTGTGAAAGGAGTTTTAGAAGGTCTGAAATCCGTTGATGTGGGTCATTGTGAGAATTGCGTTATGAGCAAGCAGAAACGAGTTAGCTTCATAAGAACTACTAGAGAACCGAAGAAAGTGCGGTTGGAAATAGTCCATACAGACGTTTGGGGACCATCTCCAGTTTCATAACTTGGTGGATCAAGGTTCTACGTCACCTTCATTGATGACCTCAGTAGAAAGGTATGAGTTTACTTTCTAAAACATAAGTCAGATGTGTTTGCCACCTTCAAGAAGTGGAAAACTAAAGTTGAAAATCATATCGGTTTGAAGATCAAATGCCTGAGGTCTAACAATGAAGAAGAGTACAAAAAATTAGAGTTTAAAACATTTTGTGCAGCCGAGGGAATTAGATTAATAAGAACAACTCCCGGTAAGGCAAGACAAAATGATATTGTAGAAATGATGAACAAAACATTGAACGAGCGAGCAAGAAGCATGAGGATTCATTCTGGACTACCAAAGACATTCTGGGCTGATGCTGTGCACACAGCAGCATATTTGATTAATAGAGGGCTGTCAGTACCCTTGAAGTTCAAATTGCACGAAGAAGTATGAACAGGAAAAGAACTCAAGTACTCTCATGTGAGAACTTTTGGTTGTACTGAGTATGTTCATGTTGATCAAAAGAAGAGAGATAAGCTTGATGCTAAGGCTGTGAAATGCTACTTCATAGACTATGGTTTTAACATGTTCGGGTAAAGGTTTTGGGATGACAAGACTAGGAACATCCTAAGACGTTGCGATGTGACATTTGATGAAAATGTCCTGTACAAGGACAAAGAGAAGATAAACTTTGACACTACAAAGCAAGTGGGAGTTGAACTTGAGTGGCAGGAAAATTCATGCAGGGATGTTACAACAGAAGCTCAAGAAACTCTTGATCCTGTTGCTGAAGAACCAAACATGGAGCAAGTTACACCTGAGCAGGTGTTGAGGAGATCATCTAGAACTATTAGAGCACCAGATAGATATTCACCCTCATTACATTATCGGTTGCTAACTGACGAAGGAGAACCAGAGTCATTTGATGAGACCCTACAAGTGGAAGATTCAACCAAGTGGGAGCAAGCCATGGATGATGAGATGAGCTCACTTGAAAAAAATAGTACGTGGGTGTTGACTGAGTTACCCACAGGAAAGAGAGCTTTATTGAACAAATGAGTGTTCAGAATCAAGGTTGAACCAGATGGCAGAAGAAGGTTTAAGGCTCGGTTAGTAGTTAAAGAATATTCACAAAGAAAAGGCATTGATTATGCTAAGATCTTTTCTCTGGTTGTGAAATTAACTACTAGCCAAATTCTGCTGAGTATTGTTGCATTGGAAAATTTGCACCTTGAGCAAATGGATGTAAAAACGACATTTTTACATGAAGATCTAGATGAGGAGATCTATATGCAACAACCAGAAAAGGCATTGATTATGCTGAGATCTTTTCTCCGATTGTGAAATTAACTACTAGCCGAATTCTGCTGAGTATTGTTGCATCTGAGAATTTGCACCTTGAGCAAATGGATGTAAAAACGACATTTTTACATGAAAATCTAAATGAGGAGATCTATATGCAACAACCAGAAGGGTTTGCAGCTCCAGGCAAGGAACACATGGTGTGTAAGCTCAATAAGAATTTGTATGGACTGAAACAAGCACCTAGACAATGGTACAAGAAGTTTGACTTCTTCATGTGCAAGAGTGGTTTCCACAGGAGTGAAAATAATCAGTGTTATTACCTCAAGAAATACACTGATTCTTATGTGTTTCTACTCCTGTATGTGAATGATATATTAATTGCTGGATCAAGTATGAGAGAGATAAACCATCTGAAGGCTAGCTTGTCTTCAGTATTTAAGATGAAAGATTTGGGTGCAGCGAAGCAGATTCTTGGGATGAGGATTTCTCGAGATAGATCTGCTGGCACATTATATCTATCCCAAGAGCAGTACATTGAGAAGGTGTTGTCCAAATTCAAGGTGAATGATGTTAAACCCAGAACTACCCTTGGCGAATCGTATTCAATTGTCAAAGGGGCAATCCCCCAAGTCAGTTGA

mRNA sequence

ATGAAGGGTGCTATAGTGGTAGCACGTGGTACAAAATCTGGAACCTTATACACCACTACAGGGTGTATGAACATAGCTGCTGTTGCTGAGAGTGCTTCAAATTCAAGTCTATGGAACAATAGACTTGGACATATGAGCGTGAAAGAAATGAAGATGCTGACTGTGAAAGGAGTTTTAGAAGGTCTGAAATCCGTTGATGTGGGTCATTGTGAGAATTGCGTTATGAGCAAGCAGAAACGAGTTAGCTTCATAAGAACTACTAGAGAACCGAAGAAAGTGCGGTTTTGGGATGACAAGACTAGGAACATCCTAAGACGTTGCGATGTGACATTTGATGAAAATGTCCTGTACAAGGACAAAGAGAAGATAAACTTTGACACTACAAAGCAAGTGGGAGTTGAACTTGAGTGGCAGGAAAATTCATGCAGGGATGTTACAACAGAAGCTCAAGAAACTCTTGATCCTGTTGCTGAAGAACCAAACATGGAGCAAGTTACACCTGAGCAGGTGTTGAGGAGATCATCTAGAACTATTAGAGCACCAGATAGATATTCACCCTCATTACATTATCGGTTGCTAACTGACGAAGGAGAACCAGAGTCATTTGATGAGACCCTACAAGTGGAAGATTCAACCAAGTGGGAGCAAGCCATGGATGATGAGATGAGCTCACTTGAAAAAAATAGTACAAAAGGCATTGATTATGCTGAGATCTTTTCTCCGATTGTGAAATTAACTACTAGCCGAATTCTGCTGAGTATTGTTGCATCTGAGAATTTGCACCTTGAGCAAATGGATGTAAAAACGACATTTTTACATGAAAATCTAAATGAGGAGATCTATATGCAACAACCAGAAGGGTTTGCAGCTCCAGGCAAGGAACACATGGTGTGTAAGCTCAATAAGAATTTGTATGGACTGAAACAAGCACCTAGACAATGGTACAAGAAGTTTGACTTCTTCATGTGCAAGAGTGGTTTCCACAGGAGTGAAAATAATCAGTGTTATTACCTCAAGAAATACACTGATTCTTATGTGTTTCTACTCCTGTATGTGAATGATATATTAATTGCTGGATCAAGTATGAGAGAGATAAACCATCTGAAGGCTAGCTTGTCTTCAGTATTTAAGATGAAAGATTTGGGTGCAGCGAAGCAGATTCTTGGGATGAGGATTTCTCGAGATAGATCTGCTGGCACATTATATCTATCCCAAGAGCAGTACATTGAGAAGGTGTTGTCCAAATTCAAGGTGAATGATGTTAAACCCAGAACTACCCTTGGCGAATCGTATTCAATTGTCAAAGGGGCAATCCCCCAAGTCAGTTGA

Coding sequence (CDS)

ATGAAGGGTGCTATAGTGGTAGCACGTGGTACAAAATCTGGAACCTTATACACCACTACAGGGTGTATGAACATAGCTGCTGTTGCTGAGAGTGCTTCAAATTCAAGTCTATGGAACAATAGACTTGGACATATGAGCGTGAAAGAAATGAAGATGCTGACTGTGAAAGGAGTTTTAGAAGGTCTGAAATCCGTTGATGTGGGTCATTGTGAGAATTGCGTTATGAGCAAGCAGAAACGAGTTAGCTTCATAAGAACTACTAGAGAACCGAAGAAAGTGCGGTTTTGGGATGACAAGACTAGGAACATCCTAAGACGTTGCGATGTGACATTTGATGAAAATGTCCTGTACAAGGACAAAGAGAAGATAAACTTTGACACTACAAAGCAAGTGGGAGTTGAACTTGAGTGGCAGGAAAATTCATGCAGGGATGTTACAACAGAAGCTCAAGAAACTCTTGATCCTGTTGCTGAAGAACCAAACATGGAGCAAGTTACACCTGAGCAGGTGTTGAGGAGATCATCTAGAACTATTAGAGCACCAGATAGATATTCACCCTCATTACATTATCGGTTGCTAACTGACGAAGGAGAACCAGAGTCATTTGATGAGACCCTACAAGTGGAAGATTCAACCAAGTGGGAGCAAGCCATGGATGATGAGATGAGCTCACTTGAAAAAAATAGTACAAAAGGCATTGATTATGCTGAGATCTTTTCTCCGATTGTGAAATTAACTACTAGCCGAATTCTGCTGAGTATTGTTGCATCTGAGAATTTGCACCTTGAGCAAATGGATGTAAAAACGACATTTTTACATGAAAATCTAAATGAGGAGATCTATATGCAACAACCAGAAGGGTTTGCAGCTCCAGGCAAGGAACACATGGTGTGTAAGCTCAATAAGAATTTGTATGGACTGAAACAAGCACCTAGACAATGGTACAAGAAGTTTGACTTCTTCATGTGCAAGAGTGGTTTCCACAGGAGTGAAAATAATCAGTGTTATTACCTCAAGAAATACACTGATTCTTATGTGTTTCTACTCCTGTATGTGAATGATATATTAATTGCTGGATCAAGTATGAGAGAGATAAACCATCTGAAGGCTAGCTTGTCTTCAGTATTTAAGATGAAAGATTTGGGTGCAGCGAAGCAGATTCTTGGGATGAGGATTTCTCGAGATAGATCTGCTGGCACATTATATCTATCCCAAGAGCAGTACATTGAGAAGGTGTTGTCCAAATTCAAGGTGAATGATGTTAAACCCAGAACTACCCTTGGCGAATCGTATTCAATTGTCAAAGGGGCAATCCCCCAAGTCAGTTGA

Protein sequence

MKGAIVVARGTKSGTLYTTTGCMNIAAVAESASNSSLWNNRLGHMSVKEMKMLTVKGVLEGLKSVDVGHCENCVMSKQKRVSFIRTTREPKKVRFWDDKTRNILRRCDVTFDENVLYKDKEKINFDTTKQVGVELEWQENSCRDVTTEAQETLDPVAEEPNMEQVTPEQVLRRSSRTIRAPDRYSPSLHYRLLTDEGEPESFDETLQVEDSTKWEQAMDDEMSSLEKNSTKGIDYAEIFSPIVKLTTSRILLSIVASENLHLEQMDVKTTFLHENLNEEIYMQQPEGFAAPGKEHMVCKLNKNLYGLKQAPRQWYKKFDFFMCKSGFHRSENNQCYYLKKYTDSYVFLLLYVNDILIAGSSMREINHLKASLSSVFKMKDLGAAKQILGMRISRDRSAGTLYLSQEQYIEKVLSKFKVNDVKPRTTLGESYSIVKGAIPQVS
Homology
[Close]
BLAST of CmaCh15G011560 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 9.5e-64
Identity = 155/398 (38.94%), Postives = 221/398 (55.53%), Query Frame = 0 

Query: 94   RFWDDKTRNILRRCDVTFDENVLYKD---KEKI------NFDTTKQVGVELEWQENSCRD 153
            R WD   + ++R  DV F E+ +       EK+      NF T           E++  +
Sbjct: 687  RLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDE 746

Query: 154  VTTEAQETLDPVAEEPNMEQVTPE-----------QVLRRSSRTIRAPDRYSPSLHYRLL 213
            V+ + ++  + + +   +++   E           Q LRRS R  R   R  PS  Y L+
Sbjct: 747  VSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERP-RVESRRYPSTEYVLI 806

Query: 214  TDEGEPESFDETLQVEDSTKWEQAMDDEMSSLEKNST----------------------- 273
            +D+ EPES  E L   +  +  +AM +EM SL+KN T                       
Sbjct: 807  SDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKK 866

Query: 274  ---------------------KGIDYAEIFSPIVKLTTSRILLSIVASENLHLEQMDVKT 333
                                 KGID+ EIFSP+VK+T+ R +LS+ AS +L +EQ+DVKT
Sbjct: 867  DGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKT 926

Query: 334  TFLHENLNEEIYMQQPEGFAAPGKEHMVCKLNKNLYGLKQAPRQWYKKFDFFMCKSGFHR 393
             FLH +L EEIYM+QPEGF   GK+HMVCKLNK+LYGLKQAPRQWY KFD FM    + +
Sbjct: 927  AFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLK 986

Query: 394  SENNQCYYLKKYTD-SYVFLLLYVNDILIAGSSMREINHLKASLSSVFKMKDLGAAKQIL 427
            + ++ C Y K++++ +++ LLLYV+D+LI G     I  LK  LS  F MKDLG A+QIL
Sbjct: 987  TYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQIL 1046


HSP 2 Score: 62.8 bits (151), Expect = 1.1e-08
Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = 0 

Query: 2   KGAIVVARGTKSGTLYTTTG--CMNIAAVAESASNSSLWNNRLGHMSVKEMKMLTVKGVL 61
           KG++V+A+G   GTLY T    C      A+   +  LW+ R+GHMS K +++L  K ++
Sbjct: 387 KGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLI 446

Query: 62  EGLKSVDVGHCENCVMSKQKRVSFIRTTREPK 92
              K   V  C+ C+  KQ RVSF +T+ E K
Sbjct: 447 SYAKGTTVKPCDYCLFGKQHRVSF-QTSSERK 477

[Close]
BLAST of CmaCh15G011560 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 144.4 bits (363), Expect = 3.0e-33
Identity = 91/274 (33.21%), Postives = 144/274 (52.55%), Query Frame = 0 

Query: 199  PESFDETLQVEDSTKWEQAMDDEMSSLEKNST---------------------------- 258
            P SFDE    +D + WE+A++ E+++ + N+T                            
Sbjct: 891  PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGN 950

Query: 259  ----------KG------IDYAEIFSPIVKLTTSRILLSIVASENLHLEQMDVKTTFLHE 318
                      +G      IDY E F+P+ ++++ R +LS+V   NL + QMDVKT FL+ 
Sbjct: 951  PIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNG 1010

Query: 319  NLNEEIYMQQPEGFAAPGKEHMVCKLNKNLYGLKQAPRQWYKKFDFFMCKSGFHRSENNQ 378
             L EEIYM+ P+G +       VCKLNK +YGLKQA R W++ F+  + +  F  S  ++
Sbjct: 1011 TLKEEIYMRLPQGISC--NSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDR 1070

Query: 379  CYYL--KKYTDSYVFLLLYVNDILIAGSSMREINHLKASLSSVFKMKDLGAAKQILGMRI 427
            C Y+  K   +  +++LLYV+D++IA   M  +N+ K  L   F+M DL   K  +G+RI
Sbjct: 1071 CIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI 1130

[Close]
BLAST of CmaCh15G011560 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.0e-30
Identity = 74/199 (37.19%), Postives = 114/199 (57.29%), Query Frame = 0 

Query: 228  NSTKGIDYAEIFSPIVKLTTSRILLSIVASENLHLEQMDVKTTFLHENLNEEIYMQQPEG 287
            N   G+DYAE FSP++K T+ RI+L +    +  + Q+DV   FL   L +++YM QP G
Sbjct: 1027 NQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPG 1086

Query: 288  FAAPGKEHMVCKLNKNLYGLKQAPRQWYKKFDFFMCKSGFHRSENNQCYYLKKYTDSYVF 347
            F    + + VCKL K LYGLKQAPR WY +   ++   GF  S ++   ++ +   S V+
Sbjct: 1087 FIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVY 1146

Query: 348  LLLYVNDILIAGSSMREINHLKASLSSVFKMKDLGAAKQILGMRISRDRSAGTLYLSQEQ 407
            +L+YV+DILI G+    +++   +LS  F +KD       LG+   R  +   L+LSQ +
Sbjct: 1147 MLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTG--LHLSQRR 1206

Query: 408  YIEKVLSKFKVNDVKPRTT 427
            YI  +L++  +   KP TT
Sbjct: 1207 YILDLLARTNMITAKPVTT 1223

[Close]
BLAST of CmaCh15G011560 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-26
Identity = 92/320 (28.75%), Postives = 139/320 (43.44%), Query Frame = 0 

Query: 153  LDPVAEEPNMEQVTPEQVLRRSSRTIRAPDRY-SPSLHYRLLTDEGEPESFDETLQVEDS 212
            L PV   P + QV  +  +   S   RA D    P+  Y   T           +Q    
Sbjct: 889  LPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKD 948

Query: 213  TKWEQAMDDEMS-----------------------------------SLEK--------- 272
             +W QAM  E++                                   SL +         
Sbjct: 949  DRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKG 1008

Query: 273  -NSTKGIDYAEIFSPIVKLTTSRILLSIVASENLHLEQMDVKTTFLHENLNEEIYMQQPE 332
             N   G+DYAE FSP++K T+ RI+L +    +  + Q+DV   FL   L +E+YM QP 
Sbjct: 1009 YNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPP 1068

Query: 333  GFAAPGKEHMVCKLNKNLYGLKQAPRQWYKKFDFFMCKSGFHRSENNQCYYLKKYTDSYV 392
            GF    +   VC+L K +YGLKQAPR WY +   ++   GF  S ++   ++ +   S +
Sbjct: 1069 GFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSII 1128

Query: 393  FLLLYVNDILIAGSSMREINHLKASLSSVFKMKDLGAAKQILGMRISRDRSAGTLYLSQE 427
            ++L+YV+DILI G+    + H   +LS  F +K+       LG  I   R    L+LSQ 
Sbjct: 1129 YMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLG--IEAKRVPQGLHLSQR 1188

[Close]
BLAST of CmaCh15G011560 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 5.8e-21
Identity = 56/158 (35.44%), Postives = 89/158 (56.33%), Query Frame = 0 

Query: 265 MDVKTTFLHENLNEEIYMQQPEGFAAPGKEHMVCKLNKNLYGLKQAPRQWYKKFDFFMCK 324
           MDV T FL+  ++E IY++QP GF        V +L   +YGLKQAP  W +  +  + K
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 325 SGFHRSENNQCYYLKKYTDSYVFLLLYVNDILIAGSSMREINHLKASLSSVFKMKDLGAA 384
            GF R E     Y +  +D  +++ +YV+D+L+A  S +  + +K  L+ ++ MKDLG  
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 385 KQILGMRISRDRSAGTLYLSQEQYIEKVLSKFKVNDVK 423
            + LG+ I +  S G + LS + YI K  S+ ++N  K
Sbjct: 121 DKFLGLNIHQS-SNGDITLSLQDYIAKAASESEINTFK 157

[Close]
BLAST of CmaCh15G011560 vs. ExPASy TrEMBL
Match: A0A2N9HZ30 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47008 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 7.0e-102
Identity = 246/655 (37.56%), Postives = 319/655 (48.70%), Query Frame = 0 

Query: 2   KGAIVVARGTKSGTLYTTTGCMNIAAVAESASNSSLWNNRLGHMSVKEMKMLTVKGVLEG 61
           KGA+VVARG K+GTLY TT   +  AVAE+ ++++LW+ RLGHMS K MK+L  KG L  
Sbjct: 102 KGAMVVARGKKTGTLYMTTSPRDTIAVAEAGADTNLWHRRLGHMSEKGMKVLLSKGKLPN 161

Query: 62  LKSVDVGHCENCVMSKQKRVSFIRTTREPKK----------------------------- 121
           LKSV+   CE+C++ KQK+VSF++  R PK                              
Sbjct: 162 LKSVEFDMCESCILGKQKKVSFLKGGRTPKSKKLELVHTDLWGPSPIASLGGSRYYVTFI 221

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 222 DDSSRKVWVYFLKNKSEVFETFKKWRAMVETETDLKLKCLRSDNGGEYINGGFKEFCAAN 281

Query: 182 ------------------------------------------------------------ 241
                                                                       
Sbjct: 282 GIRMEKTIPRTPQQNGVAERMNRTLNERARSMRLHAGLPETFWADAVNTAAYLINRGPSV 341

Query: 242 --------------------VRFWDDKTRNILRRCDVTFDENVLYKDKEKINFDTTKQVG 301
                                RFWDD+ R ++R  +V F+E V+YKD+     D  K   
Sbjct: 342 PLEFRIPEEVLERKGDETFGYRFWDDQNRKVIRSRNVIFNEQVMYKDRSSTKLDDVKVEQ 401

Query: 302 VELEW---QENSCRDVTTEAQETLDPVAEEPNMEQVTPEQVLRRSSRTIRAPDRYSPSLH 361
            + E+    E S   +    QE  +     P +EQ TP   +RRSSR IR P R+SPSL 
Sbjct: 402 KKSEFVNLDEFSNNTMQNNGQEEKENA--NPQVEQCTPAITVRRSSRNIRPPQRFSPSLF 461

Query: 362 YRLLTDEGEPESFDETLQVEDSTKWEQAMDDEMSSLEKNST------------------- 421
           Y LLTD GEPES+DE LQ+EDS KWE AM DEM+SL  + T                   
Sbjct: 462 YILLTDGGEPESYDEALQIEDSIKWELAMKDEMNSLMTSQTWELIELPQRKKALHNKWVY 521

Query: 422 ------------------------KGIDYAEIFSPIVKLTTSRILLSIVASENLHLEQMD 441
                                   +G+DY +IFSP+VKLTT R++L IVA+ENLHLEQ+D
Sbjct: 522 RVKEEHDGSKRYKARLVVKGFQQKEGVDYTDIFSPVVKLTTIRLVLGIVAAENLHLEQLD 581

[Close]
BLAST of CmaCh15G011560 vs. ExPASy TrEMBL
Match: A0A5B7BAK4 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_035380 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 2.7e-101
Identity = 253/693 (36.51%), Postives = 322/693 (46.46%), Query Frame = 0 

Query: 2    KGAIVVARGTKSGTLYTTTGCMNIAAVAESASNSSLWNNRLGHMSVKEMKMLTVKGVLEG 61
            KGA+V+ARG K GTLY TT   +   +AE+ S+S+LW+ RLGHMS K MK+L  KG L+G
Sbjct: 382  KGAMVMARGKKEGTLYVTTNSRDAITIAETGSDSNLWHYRLGHMSQKGMKVLHSKGKLQG 441

Query: 62   LKSVDVGHCENCVMSKQKRVSFIRTTREPKK----------------------------- 121
            LKSVD+  CE+C+  KQK+VSF +  R PK                              
Sbjct: 442  LKSVDIDLCEDCIFGKQKKVSFSKAGRTPKAEKLELVHTDVWGPSPVSSLGGSSYYVTFI 501

Query: 122  ------------------------------------------------------------ 181
                                                                        
Sbjct: 502  DDSTRKVWVYFLKSKSDVFSTFKKWKAMVENETGLKIKCLRSDNGGEYTDKEFKEFCATN 561

Query: 182  ------------------------------------------------------------ 241
                                                                        
Sbjct: 562  GIRMEKTIPKTPQQNGVAERMNRTLNERGRSMRIHAGLPKMFWADAVNTAAYLINRGPSV 621

Query: 242  ----------------------------------------------------------VR 301
                                                                       R
Sbjct: 622  PLDDGLPEEAWSGKEVNLSHLKVFGCVSYVHIDSDARSKLDPKSKKCTFIGYGTDEFGYR 681

Query: 302  FWDDKTRNILRRCDVTFDENVLYKDK---EKINFDTTKQVGVELEWQENSCRDVTTEAQE 361
            FWDD+ R I R  DV F+E VLYKD+   E  N DT  +    +E +E S  +V +  Q 
Sbjct: 682  FWDDQNRKITRSRDVIFNEKVLYKDRSGAESNNADTHAEKTGFVELEEPSESEVHSRVQN 741

Query: 362  TLDPVAEEPNMEQVTPEQVLRRSSRTIRAPDRYSPSLHYRLLTDEGEPESFDETLQVEDS 421
              + +   P +E VTP   LRRSSR  +AP  YSPSL+Y LL+D GEPE +DE LQV DS
Sbjct: 742  NPENII--PQVEPVTPATGLRRSSRVSKAPQCYSPSLYYLLLSDSGEPECYDEALQVGDS 801

Query: 422  TKWEQAMDDEMSSLEKNST----------------------------------------- 441
             KWE AM DEM SL  N T                                         
Sbjct: 802  AKWESAMQDEMDSLMSNQTWKLTELPKGKKALHNKWVYRIKEEHDGSKRYKARLVVKGFQ 861

[Close]
BLAST of CmaCh15G011560 vs. ExPASy TrEMBL
Match: A0A2N9EY29 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7391 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 2.7e-101
Identity = 237/533 (44.47%), Postives = 309/533 (57.97%), Query Frame = 0 

Query: 2   KGAIVVARGTKSGTLYTTTGCMNIAAVAESASNSSLWNNRLGHMSVKEMKMLTVKGVLEG 61
           KGA+VVARG K+ TLY  T   +  AVAE+ +N++LW+ RLGHMS K MK+L  KG L  
Sbjct: 407 KGAMVVARGKKTSTLYMITSPRDTIAVAEAGTNTNLWHRRLGHMSEKGMKVLLSKGKLPE 466

Query: 62  LKSVDVGHCENCVMSKQKRVSFIRTTREPKK-------VRFWDDKTRNIL----RRCDVT 121
           LKSV+   CE+C++ KQK+VSF++  R PK           W       L       D  
Sbjct: 467 LKSVEFDMCESCILGKQKKVSFLKGGRTPKSKELELVHTDLWGPSPIASLGGSREYIDGG 526

Query: 122 FDE----NVLYKDK------------EKINFDTTKQV-GVELE-------WQE------- 181
           F E    N +  +K            E++N+   ++  G+ L        W +       
Sbjct: 527 FKEFCAANGIRMEKTIPRTPQQNGVDERMNWTLNERARGMRLHAGLPETFWADAVNIAAY 586

Query: 182 --NSCRDVTTEAQETLDPVAEE------PNMEQVTPEQVLRRSSRTIRAPDRYSPSLHYR 241
             N    V+ E +   +   +E      P ++Q TP   +RRSSR IR P R+SPSL Y 
Sbjct: 587 LINRGPSVSLEFRIPKENSGQEEKENADPQVQQCTPTVTVRRSSRNIRPPQRFSPSLFYI 646

Query: 242 LLTDEGEPESFDETLQVEDSTKWEQAMDDEMSSLEKNST--------------------- 301
           LLTD GEPES DE LQ+EDS KWE AM DEM+SL  N T                     
Sbjct: 647 LLTDGGEPESHDEALQIEDSIKWELAMKDEMNSLMTNQTWELTELPQRKKALHNKWVYRV 706

Query: 302 ----------------------KGIDYAEIFSPIVKLTTSRILLSIVASENLHLEQMDVK 361
                                 +G+DY +IFSP+VKLTT R++L IV +ENLHLEQ+DVK
Sbjct: 707 KEEHDRSKRYKARLVVKGFQQKEGVDYTDIFSPVVKLTTIRLVLGIVTAENLHLEQLDVK 766

Query: 362 TTFLHENLNEEIYMQQPEGFAAPGKEHMVCKLNKNLYGLKQAPRQWYKKFDFFMCKSGFH 421
           T FLH +L E+IYM+QP+GF    KE +VCKL KNL GLKQAPRQWYKKFD FM  +GF 
Sbjct: 767 TAFLHGDLEEDIYMRQPQGFIVQEKESLVCKLRKNLNGLKQAPRQWYKKFDSFMYSTGFT 826

Query: 422 RSENNQCYYLKKYTDSYVFLLLYVNDILIAGSSMREINHLKASLSSVFKMKDLGAAKQIL 441
           R + + C Y+K + +SY+ LLLYV+D+LIA SS+ EIN+LK  LS  F MKDLG AKQIL
Sbjct: 827 RYQADHCCYVKSFDNSYIILLLYVDDMLIARSSIEEINNLKKQLSKQFTMKDLGPAKQIL 886

[Close]
BLAST of CmaCh15G011560 vs. ExPASy TrEMBL
Match: A0A438G4K3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_572 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 5.0e-100
Identity = 240/626 (38.34%), Postives = 319/626 (50.96%), Query Frame = 0 

Query: 2   KGAIVVARGTKSGTLYTTTGCMNIAAVAESASNSSLWNNRLGHMSVKEMKMLTVKGVLEG 61
           KGA V+ARG K+GTLY T+   +  AVA++++++SLW+ RLGHMS K MKML  KG L  
Sbjct: 343 KGARVLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHMSEKGMKMLLSKGKLPE 402

Query: 62  LKSVDVGHCENCVMSKQKRVSFIRTTREPKK----------------------------- 121
           LKS+D   CE+C++ KQK+VSF++T R PK                              
Sbjct: 403 LKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITLL 462

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 463 MTQVERSDNGGEYIDGGFSEYCAAQGIRMEKTIPGTPQQNAYLINRGPSVPMEFRLPEEV 522

Query: 182 ------------------------------------------------VRFWDDKTRNIL 241
                                                            RFWD++ R I+
Sbjct: 523 WSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKII 582

Query: 242 RRCDVTFDENVLYKDKEKINFDTTKQVGVELEWQENSCRDVTTEAQETLDPVAEE----- 301
           R  +V F+E V+YKD+  +  D T     E++ +++   ++    + T+    EE     
Sbjct: 583 RSRNVIFNEQVMYKDRSTVTSDVT-----EIDQKKSEFVNLDELTESTVQKGGEEDKENV 642

Query: 302 -PNMEQVTPEQVLRRSSRTIRAPDRYSPSLHYRLLTDEGEPESFDETLQVEDSTKWEQAM 361
              ++  TP   +RRSSR IR P RYSP L+Y LLTD GEPE +DE LQ E+S+KWE AM
Sbjct: 643 NSQVDLSTPVAEVRRSSRNIRPPQRYSPVLNYLLLTDGGEPECYDEALQDENSSKWELAM 702

Query: 362 DDEMSSLEKNST-------------------------------------------KGIDY 421
            DEM SL  N T                                           +GIDY
Sbjct: 703 KDEMDSLLGNQTWELTELPVGKKALHNKWVYRIKNEHDGSKRYKARLVVKGFQQKEGIDY 762

Query: 422 AEIFSPIVKLTTSRILLSIVASENLHLEQMDVKTTFLHENLNEEIYMQQPEGFAAPGKEH 441
            EIFSP+VK++T R++L +VA ENLHLEQ+DVKT FLH +L E++YM QPEGF   G+E+
Sbjct: 763 TEIFSPVVKMSTIRLVLGMVAVENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQEN 822

[Close]
BLAST of CmaCh15G011560 vs. ExPASy TrEMBL
Match: A0A2N9GVZ5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31754 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 1.5e-99
Identity = 244/628 (38.85%), Postives = 315/628 (50.16%), Query Frame = 0 

Query: 2    KGAIVVARGTKSGTLYTTTGCMNIAAVAESASNSSLWNNRLGHMSVKEMKMLTVKGVLEG 61
            KGA+VVARG K+GTLY TT   +  AVAE+ ++++LW+ RLGHMS K MK+L  KG L  
Sbjct: 376  KGAMVVARGKKTGTLYMTTSPRDTIAVAEAGADTNLWHRRLGHMSEKGMKVLLSKGKLPN 435

Query: 62   LKSVDVGHCENCVMSKQKRVSFIRTTREPKK-------------------------VRFW 121
            LKSV+   CE+C++ KQK+VSF++  R PK                          V F 
Sbjct: 436  LKSVEFDMCESCILGKQKKVSFLKGGRTPKSKKLELVHTDLWGPSPIASLGGSRYYVTFI 495

Query: 122  DDKTR------------------------------------------------------- 181
            DD +R                                                       
Sbjct: 496  DDSSRKVWVYFLKNKSEVFETFKKWRAMVETETDLKLKCLRSDNGGEYINGGFKEFCAAN 555

Query: 182  ---------------NILRRCDVTFDE--------------------------------- 241
                            +  R + T +E                                 
Sbjct: 556  GIRMEKTIPRTPQQNGVAERMNRTLNERARSMRLHAGLPETFWADAVNTAAYLINRGPSV 615

Query: 242  --------------NVLYKDKEKINFDTTKQVGVELEW---QENSCRDVTTEAQETLDPV 301
                           V+YKD+     D  K    + E+    E S   +    QE  +  
Sbjct: 616  PLEFRIPEEVWSGKEVMYKDRSSTKLDDVKVEQKKSEFVNLDEFSNNTMQNSGQEEKENA 675

Query: 302  AEEPNMEQVTPEQVLRRSSRTIRAPDRYSPSLHYRLLTDEGEPESFDETLQVEDSTKWEQ 361
               P +EQ TP   +RRSSR IR P R+SPSL Y LLTD GEPES+DE LQ+EDS KWE 
Sbjct: 676  --NPQVEQCTPAITVRRSSRNIRPPQRFSPSLFYILLTDGGEPESYDEALQIEDSIKWEL 735

Query: 362  AMDDEMSSLEKNST-------------------------------------------KGI 421
            AM DEM+SL  + T                                           +G+
Sbjct: 736  AMKDEMNSLMTSQTWELTELPQRKKALHNKWVYRVKEEHDGSKRYKARLVVKGFQQKEGV 795

Query: 422  DYAEIFSPIVKLTTSRILLSIVASENLHLEQMDVKTTFLHENLNEEIYMQQPEGFAAPGK 441
            DY +IFSP+VKLTT R++L IVA+ENLHLEQ+DVKT FLH +L E+IYM QP+GF   GK
Sbjct: 796  DYTDIFSPVVKLTTIRLVLGIVATENLHLEQLDVKTAFLHGDLEEDIYMSQPQGFIVQGK 855

[Close]
BLAST of CmaCh15G011560 vs. NCBI nr
Match: RVW67125.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 374.8 bits (961), Expect = 1.0e-99
Identity = 240/626 (38.34%), Postives = 319/626 (50.96%), Query Frame = 0 

Query: 2   KGAIVVARGTKSGTLYTTTGCMNIAAVAESASNSSLWNNRLGHMSVKEMKMLTVKGVLEG 61
           KGA V+ARG K+GTLY T+   +  AVA++++++SLW+ RLGHMS K MKML  KG L  
Sbjct: 343 KGARVLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHMSEKGMKMLLSKGKLPE 402

Query: 62  LKSVDVGHCENCVMSKQKRVSFIRTTREPKK----------------------------- 121
           LKS+D   CE+C++ KQK+VSF++T R PK                              
Sbjct: 403 LKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITLL 462

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 463 MTQVERSDNGGEYIDGGFSEYCAAQGIRMEKTIPGTPQQNAYLINRGPSVPMEFRLPEEV 522

Query: 182 ------------------------------------------------VRFWDDKTRNIL 241
                                                            RFWD++ R I+
Sbjct: 523 WSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKII 582

Query: 242 RRCDVTFDENVLYKDKEKINFDTTKQVGVELEWQENSCRDVTTEAQETLDPVAEE----- 301
           R  +V F+E V+YKD+  +  D T     E++ +++   ++    + T+    EE     
Sbjct: 583 RSRNVIFNEQVMYKDRSTVTSDVT-----EIDQKKSEFVNLDELTESTVQKGGEEDKENV 642

Query: 302 -PNMEQVTPEQVLRRSSRTIRAPDRYSPSLHYRLLTDEGEPESFDETLQVEDSTKWEQAM 361
              ++  TP   +RRSSR IR P RYSP L+Y LLTD GEPE +DE LQ E+S+KWE AM
Sbjct: 643 NSQVDLSTPVAEVRRSSRNIRPPQRYSPVLNYLLLTDGGEPECYDEALQDENSSKWELAM 702

Query: 362 DDEMSSLEKNST-------------------------------------------KGIDY 421
            DEM SL  N T                                           +GIDY
Sbjct: 703 KDEMDSLLGNQTWELTELPVGKKALHNKWVYRIKNEHDGSKRYKARLVVKGFQQKEGIDY 762

Query: 422 AEIFSPIVKLTTSRILLSIVASENLHLEQMDVKTTFLHENLNEEIYMQQPEGFAAPGKEH 441
            EIFSP+VK++T R++L +VA ENLHLEQ+DVKT FLH +L E++YM QPEGF   G+E+
Sbjct: 763 TEIFSPVVKMSTIRLVLGMVAVENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQEN 822

[Close]
BLAST of CmaCh15G011560 vs. NCBI nr
Match: RVX18181.1 (MDIS1-interacting receptor like kinase 2 [Vitis vinifera])

HSP 1 Score: 371.3 bits (952), Expect = 1.1e-98
Identity = 235/592 (39.70%), Postives = 316/592 (53.38%), Query Frame = 0 

Query: 2    KGAIVVARGTKSGTLYTTTGCMNIAAVAESASNSSLWNNRLGHMSVKEMKMLTVKGVLEG 61
            KG  V+ARG K+GTLY T+   +  AVA++++++SLW+ RLGHMS K MKML  KG L  
Sbjct: 1400 KGVRVLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHMSEKGMKMLLSKGKLPE 1459

Query: 62   LKSVDVGHCENCVMSKQKRVS---------------FIRTTRE----------------- 121
            LKS+D   CE+C++ KQKR+                  RT  E                 
Sbjct: 1460 LKSIDFDMCESCILGKQKRMEKTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWA 1519

Query: 122  ----------------------PKKV---------------------------------- 181
                                  P++V                                  
Sbjct: 1520 DAVSTAAYLINRGPSVPMEFRLPEEVWSGKKVKFSHLKVFGCVSYVHIDSDARSKLDAKS 1579

Query: 182  ---------------RFWDDKTRNILRRCDVTFDENVLYKDKEKINFDTTKQVGVELEWQ 241
                           RFWD++ R I+R  +V F+E V+YKD+  +  D T     E++ +
Sbjct: 1580 KICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSTVTSDVT-----EIDQK 1639

Query: 242  ENSCRDVTTEAQETLDPVAEE------PNMEQVTPEQVLRRSSRTIRAPDRYSPSLHYRL 301
            ++   ++    + T+    EE        ++  TP   +RRSSR  R P RYSP L+Y L
Sbjct: 1640 KSEFVNLDELTESTVQKGGEEDKENVNSQVDLSTPVVEVRRSSRNTRPPQRYSPVLNYLL 1699

Query: 302  LTDEGEPESFDETLQVEDSTKWEQAMDDEMSSLEKNST---------------------- 361
            LTD G+PE +DE LQ E+S+KWE AM DEM SL  N T                      
Sbjct: 1700 LTDGGQPECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTELPVGKKALHNKWVYRIK 1759

Query: 362  ---------------------KGIDYAEIFSPIVKLTTSRILLSIVASENLHLEQMDVKT 421
                                 +GIDY EIFSP+VK++T R++L +VA+ENLHLEQ+DVKT
Sbjct: 1760 NEHDGSKRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKT 1819

Query: 422  TFLHENLNEEIYMQQPEGFAAPGKEHMVCKLNKNLYGLKQAPRQWYKKFDFFMCKSGFHR 441
             FLH +L E++YM QPEGF   G+E++VCKL K+LYGLKQAPRQWYKKFD FM + GF R
Sbjct: 1820 AFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKR 1879

[Close]
BLAST of CmaCh15G011560 vs. NCBI nr
Match: KAE8724080.1 (cytochrome P450 71A9-like [Hibiscus syriacus])

HSP 1 Score: 370.9 bits (951), Expect = 1.5e-98
Identity = 242/597 (40.54%), Postives = 315/597 (52.76%), Query Frame = 0 

Query: 2    KGAIVVARGTKSGTLYTTTGCMNIAAVAESASNSSLWNNRLGHMSVKEMKMLTVKGVLEG 61
            KGA+V+ RG K+GTLY T+   NI A A++   S+LW+ RLGHM  K MK L  KG L  
Sbjct: 537  KGALVITRGKKTGTLYVTSNLENIIAAADADGKSNLWHQRLGHMIEKGMKTLLSKGKLSD 596

Query: 62   LKSVDVGHCENCVMSKQKRVSF-------------------------------------- 121
            LKS+DVG CE+C+  KQK+VS                                       
Sbjct: 597  LKSIDVGLCEDCIFGKQKKVSSLYYVIFIDDSTRKVWVYFLKKKSKVFDTFRKWKAMVEN 656

Query: 122  --------IRTTRE---------------------------------------PKKV--- 181
                    +RT  E                                       P++V   
Sbjct: 657  ETGLKVKRLRTQNERARSMRIHVGLPKFLWDEAMNTAAYLINRGPSIPLNDRIPEEVWSK 716

Query: 182  ----------------------------------------------RFWDDKTRNILRRC 241
                                                          RFWD + R I++  
Sbjct: 717  KEINLSHLRVFGCISYAYIDSAERSKLDAKSNKCAFVGYGGDEFGYRFWDYENRKIIKSR 776

Query: 242  DVTFDENVLYKDK---EKINFDTTKQVGVELEWQENSCRDVTTEAQETLDPVAEEPNMEQ 301
            D  F+ENV+YKD+   E  + +T  +     E++E S  DV    Q + + V E+P    
Sbjct: 777  DFIFNENVMYKDRSTVESSSSNTKAETKEFTEFEEISGNDV----QISPEAVQEKPG--- 836

Query: 302  VTPEQVLRRSSRTIRAPDRYSPSLHYRLLTDEGEPESFDETLQVEDSTKWEQAMDDEMSS 361
             TPE  LRRSSR  +   +YSPSLHY LLTD  EP+ +DE +QV+DS KWE +M DEM S
Sbjct: 837  -TPE--LRRSSRIPKLTQQYSPSLHYLLLTDNSEPDCYDEAMQVKDSVKWESSMKDEMDS 896

Query: 362  L---EKN----------------STKGIDYAEIFSPIVKLTTSRILLSIVASENLHLEQM 421
            L   E+N                  +GIDY EIFSP+VKL+T R++L IVA+ENLHLEQ+
Sbjct: 897  LMIKEENDGRKRYKARLVVKGFQQKEGIDYNEIFSPVVKLSTIRLVLKIVAAENLHLEQL 956

Query: 422  DVKTTFLHENLNEEIYMQQPEGFAAPGKEHMVCKLNKNLYGLKQAPRQWYKKFDFFMCKS 442
            +VKT FLH +L EEIYM+QPEGF    K+++VC+L K+LYGLKQAPRQWYKKFD FM  S
Sbjct: 957  NVKTAFLHGDLEEEIYMRQPEGFIEADKKNLVCRLKKSLYGLKQAPRQWYKKFDSFMSSS 1016

[Close]
BLAST of CmaCh15G011560 vs. NCBI nr
Match: KAE8684911.1 (Actin-depolymerizing factor 1 [Hibiscus syriacus])

HSP 1 Score: 369.4 bits (947), Expect = 4.4e-98
Identity = 253/644 (39.29%), Postives = 318/644 (49.38%), Query Frame = 0 

Query: 2    KGAIVVARGTKSGTLYTTTGCMNIAAVAESASNSSLWNNRLGHMSVKEMKMLTVKGVLEG 61
            KGA+V+ARG K+ TLY T+   NI  VA++   S+LW+ RLGHMS K MK+L  KG L  
Sbjct: 466  KGALVIARGKKTDTLYVTSNLENIITVADADGKSNLWHQRLGHMSEKGMKILLSKGKLPD 525

Query: 62   LKSVDVGHCENCVMSKQKRV-------------SFI------------------------ 121
            LK+VDVG CE+C+  KQK+V             +FI                        
Sbjct: 526  LKNVDVGLCEDCIFGKQKKVWVYFLKKKSEVFDTFIKWKAMVENETGLKVKRLRSDNGGE 585

Query: 122  -----------------------------------RTTRE-----------PKKV----- 181
                                               RT  E           PK +     
Sbjct: 586  YRDSSFRDFCANNGIKMETTVPITPQQNGVAERMNRTLNERARSMRIHAGLPKFLWAEAI 645

Query: 182  ------------------------------------------------------------ 241
                                                                        
Sbjct: 646  NTAAYLINRGPSVPLDGGIPEEAWSKKEINLSHLRVFGCISYVHINSAERSKLDAKSNKY 705

Query: 242  ------------RFWDDKTRNILRRCDVTFDENVLYKDKEKINFDTTKQVGVEL-EWQEN 301
                        RFWD + R I+R  DV F+ENV+YKD+       T+    E  E++E 
Sbjct: 706  VFVGYGGDEFGYRFWDYENRKIIRSRDVIFNENVMYKDRSTAESSNTEAETKEFAEFEEI 765

Query: 302  SCRDVTTEAQETLDPVAEEPNMEQVTPEQVLRRSSRTIRAPDRYSPSLHYRLLTDEGEPE 361
            S  DV    Q   + V EEP+    TPE  LRRSSR  +   +YSPSLHY LLTD GEPE
Sbjct: 766  SGNDV----QINPEIVQEEPH----TPE--LRRSSRIPKPTQQYSPSLHYLLLTDNGEPE 825

Query: 362  SFDETLQVEDSTKWEQAMDDEMSSLEKNST------------------------------ 421
             +DE +QVEDS KWE +M DEM SL  N T                              
Sbjct: 826  CYDEAMQVEDSVKWESSMKDEMDSLMSNQTWELAELPPGKKALHNKWIYRIKEEHDGRKR 885

Query: 422  -------------KGIDYAEIFSPIVKLTTSRILLSIVASENLHLEQMDVKTTFLHENLN 441
                         +GIDY EIFSP+VKL+T R++L IVA+ENLHLEQ+DVKT FLH +L 
Sbjct: 886  YKARLVVKGFQQKEGIDYNEIFSPVVKLSTIRLVLKIVAAENLHLEQLDVKTAFLHGDLE 945

[Close]
BLAST of CmaCh15G011560 vs. NCBI nr
Match: RVW18006.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 369.0 bits (946), Expect = 5.7e-98
Identity = 229/523 (43.79%), Postives = 305/523 (58.32%), Query Frame = 0 

Query: 2   KGAIVVARGTKSGTLYTTTGCMNIAAVAESASNSSLWNNRLGHMSVKEMKMLTVKGVLEG 61
           KGA V+ARG K+GTLY T+   +  AVA++++++SLW+ RLGHMS K MKML  KG L  
Sbjct: 351 KGARVLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHMSEKGMKMLLSKGKLPE 410

Query: 62  LKSVDVGHCENCVMSKQKRVSFIRTTREPKKVR--------------------------- 121
           LKS+D   CE+C++ KQK+VSF++T R PK  +                           
Sbjct: 411 LKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGTSPVASLGGSRELGWRR 470

Query: 122 -FWDDKTRNI-LRRCDVTFDENV----LYKDKEKINFDTTKQV-------GVELEWQENS 181
            F    +R + L   + T +E      L+    K  +             G  +  +   
Sbjct: 471 PFLGHHSRMVWLNAMNKTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFRL 530

Query: 182 CRDVTTEAQETLDPVAEEPNMEQVTPEQVLRRSSRTIRAPDRYSPSLHYRLLTDEGEPES 241
             +V +  +E  + V  + ++   TP   +RRSSR IR   RYSP L+Y LLTD GEPE 
Sbjct: 531 PEEVWSGGEEDKENVNSQVDLS--TPVVEVRRSSRNIRPSQRYSPVLNYLLLTDGGEPEC 590

Query: 242 FDETLQVEDSTKWEQAMDDEMSSLEKNST------------------------------- 301
           +DE LQ E+S+KWE AM DEM SL  N T                               
Sbjct: 591 YDEALQDENSSKWELAMKDEMDSLLGNQTWELTELPVGKKALHNKWVYRIKNEHDGSKRY 650

Query: 302 ------------KGIDYAEIFSPIVKLTTSRILLSIVASENLHLEQMDVKTTFLHENLNE 361
                       +GIDY EIFSP+VK++T R++L +VA ENLHLEQ+DVKT FLH +L E
Sbjct: 651 KARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAVENLHLEQLDVKTAFLHGDLEE 710

Query: 362 EIYMQQPEGFAAPGKEHMVCKLNKNLYGLKQAPRQWYKKFDFFMCKSGFHRSENNQCYYL 421
           ++YM QPEGF   G+E++VCKL K+LYGLKQAPRQWYKKFD FM +  F R E + C Y+
Sbjct: 711 DLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIRFKRCEADHCCYV 770

Query: 422 KKYTDSYVFLLLYVNDILIAGSSMREINHLKASLSSVFKMKDLGAAKQILGMRISRDRSA 441
           K + +SY+ LLLYV+D+LIAGS + +IN+LK  LS  F MKDLGAAKQILGMRI RD++ 
Sbjct: 771 KSFDNSYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKAN 830

[Close]
BLAST of CmaCh15G011560 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 141.0 bits (354), Expect = 2.3e-33
Identity = 77/197 (39.09%), Postives = 123/197 (62.44%), Query Frame = 0 

Query: 231 KGIDYAEIFSPIVKLTTSRILLSIVASENLHLEQMDVKTTFLHENLNEEIYMQQPEGFAA 290
           +GID+ E FSP+ KLT+ +++L+I A  N  L Q+D+   FL+ +L+EEIYM+ P G+AA
Sbjct: 159 EGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAA 218

Query: 291 PGKEHM----VCKLNKNLYGLKQAPRQWYKKFDFFMCKSGFHRSENNQCYYLKKYTDSYV 350
              + +    VC L K++YGLKQA RQW+ KF   +   GF +S ++  Y+LK     ++
Sbjct: 219 RQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFL 278

Query: 351 FLLLYVNDILIAGSSMREINHLKASLSSVFKMKDLGAAKQILGMRISRDRSAGTLYLSQE 410
            +L+YV+DI+I  ++   ++ LK+ L S FK++DLG  K  LG+ I+  RSA  + + Q 
Sbjct: 279 CVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQR 338

Query: 411 QYIEKVLSKFKVNDVKP 424
           +Y   +L +  +   KP
Sbjct: 339 KYALDLLDETGLLGCKP 353

[Close]
BLAST of CmaCh15G011560 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 4.8e-10
Identity = 37/81 (45.68%), Postives = 51/81 (62.96%), Query Frame = 0 

Query: 346 VFLLLYVNDILIAGSSMREINHLKASLSSVFKMKDLGAAKQILGMRISRDRSAGTLYLSQ 405
           ++LLLYV+DIL+ GSS   +N L   LSS F MKDLG     LG++I    S   L+LSQ
Sbjct: 1   MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 60

Query: 406 EQYIEKVLSKFKVNDVKPRTT 427
            +Y E++L+   + D KP +T
Sbjct: 61  TKYAEQILNNAGMLDCKPMST 79

[Close]
BLAST of CmaCh15G011560 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 54.7 bits (130), Expect = 2.2e-07
Identity = 32/96 (33.33%), Postives = 54/96 (56.25%), Query Frame = 0 

Query: 1   MKGAIVVARGTKSGTLYTTTGCMNI--AAVAESASNSS-LWNNRLGHMSVKEMKMLTVKG 60
           +KG   + +G +  +LY   G +    + +AE+A + + LW++RL HMS + M++L  KG
Sbjct: 32  LKGCRTILKGNRHDSLYILQGSVETGESNLAETAKDETRLWHSRLAHMSQRGMELLVKKG 91

Query: 61  VLEGLKSVDVGHCENCVMSKQKRVSFI---RTTREP 91
            L+  K   +  CE+C+  K  RV+F     TT+ P
Sbjct: 92  FLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNP 127

The following BLAST results are available for this feature:
BLAST of CmaCh15G011560 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109789.5e-6438.94Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041463.0e-3333.21Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q94HW24.0e-3037.19Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT941.2e-2628.75Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P256005.8e-2135.44Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
BLAST of CmaCh15G011560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2N9HZ307.0e-10237.56Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... [more]
A0A5B7BAK42.7e-10136.51Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_035380 PE=4 SV=1[more]
A0A2N9EY292.7e-10144.47Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7391 PE=4 SV=1[more]
A0A438G4K35.0e-10038.34Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A2N9GVZ51.5e-9938.85Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31754 PE=4 SV=1[more]
BLAST of CmaCh15G011560 vs. NCBI nr
Match NameE-valueIdentityDescription
RVW67125.11.0e-9938.34Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
RVX18181.11.1e-9839.70MDIS1-interacting receptor like kinase 2 [Vitis vinifera][more]
KAE8724080.11.5e-9840.54cytochrome P450 71A9-like [Hibiscus syriacus][more]
KAE8684911.14.4e-9839.29Actin-depolymerizing factor 1 [Hibiscus syriacus][more]
RVW18006.15.7e-9843.79Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
BLAST of CmaCh15G011560 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.12.3e-3339.09cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.14.8e-1045.68DNA/RNA polymerases superfamily protein [more]
ATMG00300.12.2e-0733.33Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 27..78
e-value: 6.2E-10
score: 38.8
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 231..426
e-value: 5.0E-53
score: 180.2
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 230..426
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 245..406

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G011560.1CmaCh15G011560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
molecular_function GO:0005488 binding
molecular_function GO:0016740 transferase activity