CmaCh15G011340 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh15G011340
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description14 kDa proline-rich protein DC2.15-like
LocationCma_Chr15: 7204589 .. 7206064 (-)
RNA-Seq ExpressionCmaCh15G011340
SyntenyCmaCh15G011340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAAAGCTACACCCTCCCTCGCCTTCCTCCTCTCTCTCAATCTCCTCTTCTTTTCCCTTGTCTCAGCCTGCAGCGACTGCTATGTCCCTTCCCCTCCCATTCCCAACCCATGCCCTCCTACAATGCCAAACCCTCCATTTGCCCATGGAAAGTGCCTTAGGGACACTCTTAAACTCGGCGTCTGCGCCAAGGTGACGCAATATCTACCACTTAAAAGTGTGAATAGATATGAAAATATTATTACTCAATAAAAGATACAGATCTAAGAACAAGAAATAGAATTGGGATCGAAGATTATTAATCTTCATTGATATTCACCACCTTTCACAACATTTCAAAATGATACAAGATACTAAATAATATCTACAAATAAAATATAAACTAAGTAAATCTTGATAATAAAATAAAATATACTACTATTCAAATTTAACTTATTACGAATATTTAAAATATATTTCCTAACTAATATATTCTTCAAAATATTAAATGATTACGAACCTCGTATATTCTATAACTAATTCAAATTCGAAATAAGTTAGCACTAAATTATGACAGCCTCCCTTGGTGCAAGCTTATTTCTTAATAACTCTGAGAGCTTTTAGGAAAACTTCAAACTTCATTTTGGCAAGTGCTTTAATGTCTGCAAGTATGTATTTCGTGCAATTCAACATCCTGCGTTAACACATTCTTTCGAACAAAATAATCTACTAAGAATTTCTTCTAGCTAGGCTTGCGTATGGACTTTTCAGGCACGCCACCACCTGAATAAGACACTGACACATCATGTTCACAGTGATTCAATCCGGGAATCTTCTAAAAAGATCTAATTTTGAGAGCATTTGACACTTCCGGTCTCAAAACAGTCTTCTCTCCAATGGTCTTAAACTTTGAGGCTTCCACAACTATAAAACCCATTTCACCATTTGAGTCCACATAAAGTCCACCCAAAATATACAAAGCATCTACATGGCCAAGCTTCAAGTCGATTGCCTTCTGAAACACCTCAATTGCTCGCTCATCTTCCCCCATTGCATGCAAAGCGGAGGCCAAATCACAGTGAGCATTAGCATAATCTGGTTTCATGAATATGGTCTCTTCCAAGGCCTTAACAGCAGGATCCAAATTACTAATATGACCCTCCAATGATTGAATCTGAGCTTTTGATTGCTCCAATTCTAATGTCAAAGAGTAATAATTCATCTCAACTTGGGCAGACTCAGCCTACTCCATACACCGGTGAATTACATCTTTGGCAGACTGCAAAAGGTCTTGATCTTCTGTACTTTTTTACCACTCAATATCTGCGCAGGAGCTTTATGTCCTTGGTCAAGGTTCAAGTCATCCTTACTATGATCACCAAGGGCATGCTTGAGCTTCTGAGCAAGGGACTCATCTTCTTCAGCTACCCAACCATCATGCTCATCACAAGCACGGTCACCATTGTCACTAGATGCATAGTCCTGACTTAA

mRNA sequence

ATGGCTTCCAAAGCTACACCCTCCCTCGCCTTCCTCCTCTCTCTCAATCTCCTCTTCTTTTCCCTTGTCTCAGCCTGCAGCGACTGCTATACTCAGCCTACTCCATACACCGGTGAATTACATCTTTGGCAGACTGCAAAAGGTCTTGATCTTCTGTACTTTTTTACCACTCAATATCTGCGCAGGAGCTTTATGTCCTTGGTCAAGGTTCAAGTCATCCTTACTATGATCACCAAGGGCATGCTTGAGCTTCTGAGCAAGGGACTCATCTTCTTCAGCTACCCAACCATCATGCTCATCACAAGCACGGTCACCATTGTCACTAGATGCATAGTCCTGACTTAA

Coding sequence (CDS)

ATGGCTTCCAAAGCTACACCCTCCCTCGCCTTCCTCCTCTCTCTCAATCTCCTCTTCTTTTCCCTTGTCTCAGCCTGCAGCGACTGCTATACTCAGCCTACTCCATACACCGGTGAATTACATCTTTGGCAGACTGCAAAAGGTCTTGATCTTCTGTACTTTTTTACCACTCAATATCTGCGCAGGAGCTTTATGTCCTTGGTCAAGGTTCAAGTCATCCTTACTATGATCACCAAGGGCATGCTTGAGCTTCTGAGCAAGGGACTCATCTTCTTCAGCTACCCAACCATCATGCTCATCACAAGCACGGTCACCATTGTCACTAGATGCATAGTCCTGACTTAA

Protein sequence

MASKATPSLAFLLSLNLLFFSLVSACSDCYTQPTPYTGELHLWQTAKGLDLLYFFTTQYLRRSFMSLVKVQVILTMITKGMLELLSKGLIFFSYPTIMLITSTVTIVTRCIVLT
Homology
[Close]
BLAST of CmaCh15G011340 vs. ExPASy TrEMBL
Match: A0A6J1E2C9 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC111430198 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.9e-07
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0 

Query: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCY----TQPTPYTG 39
          MASKATPSLAFLLSLNLLFFSLVSACSDCY    T+P P +G
Sbjct: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYVPSPTEPNPSSG 42

[Close]
BLAST of CmaCh15G011340 vs. ExPASy TrEMBL
Match: A0A6J1I2C7 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita maxima OX=3661 GN=LOC111468975 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.9e-06
Identity = 31/35 (88.57%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYTQPTP 36
          MASKATPSLAFLLSLNLLFFSLVSACSDCY    P
Sbjct: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYVPSPP 35

[Close]
BLAST of CmaCh15G011340 vs. ExPASy TrEMBL
Match: A0A6J1E3W5 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC111430361 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.9e-06
Identity = 31/35 (88.57%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYTQPTP 36
          MASKATPSLAFLLSLNLLFFSLVSACSDCY    P
Sbjct: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYVPSPP 35

[Close]
BLAST of CmaCh15G011340 vs. ExPASy TrEMBL
Match: A0A6J1E6B8 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC111430364 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.9e-06
Identity = 31/35 (88.57%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYTQPTP 36
          MASKATPSLAFLLSLNLLFFSLVSACSDCY    P
Sbjct: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYVPSPP 35

[Close]
BLAST of CmaCh15G011340 vs. ExPASy TrEMBL
Match: A0A6J1E6C3 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC111430368 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.4e-06
Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYTQPTP 36
          MASKATPSLAFLLSLNLLFFSL+SACSDCY    P
Sbjct: 1  MASKATPSLAFLLSLNLLFFSLISACSDCYVPSPP 35

[Close]
BLAST of CmaCh15G011340 vs. NCBI nr
Match: XP_022922132.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita moschata])

HSP 1 Score: 64.7 bits (156), Expect = 5.9e-07
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0 

Query: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCY----TQPTPYTG 39
          MASKATPSLAFLLSLNLLFFSLVSACSDCY    T+P P +G
Sbjct: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYVPSPTEPNPSSG 42

[Close]
BLAST of CmaCh15G011340 vs. NCBI nr
Match: XP_023551373.1 (14 kDa proline-rich protein DC2.15-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 62.0 bits (149), Expect = 3.8e-06
Identity = 31/35 (88.57%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYTQPTP 36
          MASKATPSLAFLLSLNLLFFSLVSACSDCY    P
Sbjct: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYVPSPP 35

[Close]
BLAST of CmaCh15G011340 vs. NCBI nr
Match: XP_022969923.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita maxima])

HSP 1 Score: 62.0 bits (149), Expect = 3.8e-06
Identity = 31/35 (88.57%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYTQPTP 36
          MASKATPSLAFLLSLNLLFFSLVSACSDCY    P
Sbjct: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYVPSPP 35

[Close]
BLAST of CmaCh15G011340 vs. NCBI nr
Match: XP_023551384.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 62.0 bits (149), Expect = 3.8e-06
Identity = 31/35 (88.57%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYTQPTP 36
          MASKATPSLAFLLSLNLLFFSLVSACSDCY    P
Sbjct: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYVPSPP 35

[Close]
BLAST of CmaCh15G011340 vs. NCBI nr
Match: XP_022922346.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita moschata])

HSP 1 Score: 62.0 bits (149), Expect = 3.8e-06
Identity = 31/35 (88.57%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYTQPTP 36
          MASKATPSLAFLLSLNLLFFSLVSACSDCY    P
Sbjct: 1  MASKATPSLAFLLSLNLLFFSLVSACSDCYVPSPP 35

The following BLAST results are available for this feature:
BLAST of CmaCh15G011340 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh15G011340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E2C92.9e-0780.9514 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A6J1I2C71.9e-0688.5714 kDa proline-rich protein DC2.15-like OS=Cucurbita maxima OX=3661 GN=LOC111468... [more]
A0A6J1E3W51.9e-0688.5714 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A6J1E6B81.9e-0688.5714 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A6J1E6C32.4e-0685.7114 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
BLAST of CmaCh15G011340 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022922132.15.9e-0780.9514 kDa proline-rich protein DC2.15-like [Cucurbita moschata][more]
XP_023551373.13.8e-0688.5714 kDa proline-rich protein DC2.15-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022969923.13.8e-0688.5714 kDa proline-rich protein DC2.15-like [Cucurbita maxima][more]
XP_023551384.13.8e-0688.5714 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo][more]
XP_022922346.13.8e-0688.5714 kDa proline-rich protein DC2.15-like [Cucurbita moschata][more]
BLAST of CmaCh15G011340 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G011340.1CmaCh15G011340.1mRNA