CmaCh15G011110 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G011110
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	3-isopropylmalate dehydratase small subunit 3-like
Location	Cma_Chr15: 7066287 .. 7067057 (-)
RNA-Seq Expression	CmaCh15G011110
Synteny	CmaCh15G011110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTGCAGCCTTTGTGTCTGTAAGCCCTTTCGCCACTTCCACTCCCCGATCGTCTCCCTCCATTTCCCATCTCTCACCTCCTCGAACCATCAAATTTCCCACTTTTTATTCCAATTTTCTCAATGATCTCTCCACCACTGTCTCCCACGCGCCGTCACGTGCTGCAATTATTCTCCCTCGAGCAACCGCTACACCGTCCTACGCCGTTTCTTCAAGCACCGTATTTCACGGCTTCTGCTATGTCGTCGGAGACAACATCGACACGGACCAGATTATTCCGGCTGAGTACTTAACCTTGGTCCCTTCAAATCCCAGCGAGTACGAGAAGCTCGGATCTCACGCCCTAGTTGGCCTTCCTTCCTCTTATTCCACACGCTTCGTGGAATCTAACGAGATGAAGACCAAATACAGTATCATAATTGCCGGCGACAACTTCGGTTGCGGTTCTTCACGGGAGCATGCGCCGGTTGCGTTGGGAGCATCCGGTGCGGTGGCTGTGGTTGCTGAATCGTATGCGCGTATATTCTTCAGAAACTCGGTAGCGACTGGAGAGATTTATCCCTTGGAATCGGAAATTAGGATCTGCGATGAATGTAAGACTGGCGATGTGGTGACTATAGAGCTCGCAGATAGCCGCTTGATCAACCACACGAGGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTCATCCAGGCTGGAGGGATCTTCGCATATGCAAGGAAGACGGGTATGATTCCAAGCCATGCGCAGTGA

mRNA sequence

ATGGCGACTGCAGCCTTTGTGTCTGTAAGCCCTTTCGCCACTTCCACTCCCCGATCGTCTCCCTCCATTTCCCATCTCTCACCTCCTCGAACCATCAAATTTCCCACTTTTTATTCCAATTTTCTCAATGATCTCTCCACCACTGTCTCCCACGCGCCGTCACGTGCTGCAATTATTCTCCCTCGAGCAACCGCTACACCGTCCTACGCCGTTTCTTCAAGCACCGTATTTCACGGCTTCTGCTATGTCGTCGGAGACAACATCGACACGGACCAGATTATTCCGGCTGAGTACTTAACCTTGGTCCCTTCAAATCCCAGCGAGTACGAGAAGCTCGGATCTCACGCCCTAGTTGGCCTTCCTTCCTCTTATTCCACACGCTTCGTGGAATCTAACGAGATGAAGACCAAATACAGTATCATAATTGCCGGCGACAACTTCGGTTGCGGTTCTTCACGGGAGCATGCGCCGGTTGCGTTGGGAGCATCCGGTGCGGTGGCTGTGGTTGCTGAATCGTATGCGCGTATATTCTTCAGAAACTCGGTAGCGACTGGAGAGATTTATCCCTTGGAATCGGAAATTAGGATCTGCGATGAATGTAAGACTGGCGATGTGGTGACTATAGAGCTCGCAGATAGCCGCTTGATCAACCACACGAGGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTCATCCAGGCTGGAGGGATCTTCGCATATGCAAGGAAGACGGGTATGATTCCAAGCCATGCGCAGTGA

Coding sequence (CDS)

ATGGCGACTGCAGCCTTTGTGTCTGTAAGCCCTTTCGCCACTTCCACTCCCCGATCGTCTCCCTCCATTTCCCATCTCTCACCTCCTCGAACCATCAAATTTCCCACTTTTTATTCCAATTTTCTCAATGATCTCTCCACCACTGTCTCCCACGCGCCGTCACGTGCTGCAATTATTCTCCCTCGAGCAACCGCTACACCGTCCTACGCCGTTTCTTCAAGCACCGTATTTCACGGCTTCTGCTATGTCGTCGGAGACAACATCGACACGGACCAGATTATTCCGGCTGAGTACTTAACCTTGGTCCCTTCAAATCCCAGCGAGTACGAGAAGCTCGGATCTCACGCCCTAGTTGGCCTTCCTTCCTCTTATTCCACACGCTTCGTGGAATCTAACGAGATGAAGACCAAATACAGTATCATAATTGCCGGCGACAACTTCGGTTGCGGTTCTTCACGGGAGCATGCGCCGGTTGCGTTGGGAGCATCCGGTGCGGTGGCTGTGGTTGCTGAATCGTATGCGCGTATATTCTTCAGAAACTCGGTAGCGACTGGAGAGATTTATCCCTTGGAATCGGAAATTAGGATCTGCGATGAATGTAAGACTGGCGATGTGGTGACTATAGAGCTCGCAGATAGCCGCTTGATCAACCACACGAGGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTCATCCAGGCTGGAGGGATCTTCGCATATGCAAGGAAGACGGGTATGATTCCAAGCCATGCGCAGTGA

Protein sequence

MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIILPRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGGIFAYARKTGMIPSHAQ

Homology

[Close]

BLAST of CmaCh15G011110 vs. ExPASy Swiss-Prot
Match: Q9ZW85 (3-isopropylmalate dehydratase small subunit 1 OS=Arabidopsis thaliana OX=3702 GN=SSU1 PE=1 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 5.7e-85
Identity = 168/253 (66.40%), Postives = 192/253 (75.89%), Query Frame = 0


Query: 13  ATSTPRSSPSISH--LSPPRTIKFPTFYSNFLNDLSTTVSH------APSRAAIILPRAT 72
           A S   ++P++S    SP +   F TF S FL   ST+V+       +   ++  + R+ 
Sbjct: 2   AASLQSANPTLSRTLASPNKPSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFVTRSA 61

Query: 73  ATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSY 132
           A P         FHG CYVVGDNIDTDQIIPAE+LTLVPSNP EYEKLGS+ALVGLP+SY
Sbjct: 62  AEP----QERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGLPASY 121

Query: 133 STRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVAT 192
             RFV+  EMKTKYSIII G+NFGCGSSREHAPV LGA+GA AVVA+SYARIFFRNSVAT
Sbjct: 122 KERFVQPGEMKTKYSIIIGGENFGCGSSREHAPVCLGAAGAKAVVAQSYARIFFRNSVAT 181

Query: 193 GEIYPLESEIRICDECKTGDVVTIEL--ADSRLINHTRGKEYKLKPIGDAGPVIQAGGIF 252
           GE+YPL+SE+R+CDEC TGDV T+EL   DS LINHT GKEYKLKPIGDAGPVI AGGIF
Sbjct: 182 GEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIF 241

Query: 253 AYARKTGMIPSHA 256
           AYARK GMIPS A
Sbjct: 242 AYARKAGMIPSAA 250

[Close]

BLAST of CmaCh15G011110 vs. ExPASy Swiss-Prot
Match: Q9LYT7 (3-isopropylmalate dehydratase small subunit 3 OS=Arabidopsis thaliana OX=3702 GN=SSU3 PE=1 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 6.3e-76
Identity = 152/219 (69.41%), Postives = 170/219 (77.63%), Query Frame = 0


Query: 42  LNDLSTTVSHAP--SRAAIILPRATATPSYAVSSST--VFHGFCYVVGDNIDTDQIIPAE 101
           L   ST  ++ P  S +A I+ R  A+ S +  S T   FHG C+V+ DNIDTDQIIPAE
Sbjct: 34  LKSASTIFNYKPLTSSSATIITRVAASSSDSGESITRETFHGLCFVLKDNIDTDQIIPAE 93

Query: 102 YLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAP 161
           Y TL+PS P + EKLGS AL GLP  Y+ RFV   EMK+KYS+II GDNFGCGSSREHAP
Sbjct: 94  YGTLIPSIPEDREKLGSFALNGLPKFYNERFVVPGEMKSKYSVIIGGDNFGCGSSREHAP 153

Query: 162 VALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICDECKTGDVVTIELAD---SR 221
           V LGA+GA AVVAESYARIFFRN VATGEI+PLESE+RICDECKTGDVVTIE  +   S 
Sbjct: 154 VCLGAAGAKAVVAESYARIFFRNCVATGEIFPLESEVRICDECKTGDVVTIEHKEDGSSL 213

Query: 222 LINHTRGKEYKLKPIGDAGPVIQAGGIFAYARKTGMIPS 254
           LINHT  KEYKLKP+GDAGPVI AGGIFAYARK GMIPS
Sbjct: 214 LINHTTRKEYKLKPLGDAGPVIDAGGIFAYARKAGMIPS 252

[Close]

BLAST of CmaCh15G011110 vs. ExPASy Swiss-Prot
Match: Q9ZW84 (3-isopropylmalate dehydratase small subunit 2 OS=Arabidopsis thaliana OX=3702 GN=SSU2 PE=1 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.0e-70
Identity = 148/255 (58.04%), Postives = 179/255 (70.20%), Query Frame = 0


Query: 8   SVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDL---STTVSHAPSRAAIILPRAT 67
           S+  F  + P SS   S  S   T + P    N    L   S +++   + +  I+PRA 
Sbjct: 4   SLPTFPQALPCSSTKTS--SSLATFRSPFLRFNGSTSLIPSSISITSRGTSSPTIIPRAA 63

Query: 68  ATPSYA--VSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPS 127
           A+ S +    ++T FHG CYV+ DNIDTDQIIPA      PSN  E +++ +HAL GLP 
Sbjct: 64  ASESDSNEALANTTFHGLCYVLKDNIDTDQIIPAGAACTFPSNQQERDEIAAHALSGLPD 123

Query: 128 SYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSV 187
            + TRF+E  E ++KYSIII G+NFGCGSSREHAPV LGA+GA A+VAESYARIFFRNSV
Sbjct: 124 FHKTRFIEPGENRSKYSIIIGGENFGCGSSREHAPVCLGAAGAKAIVAESYARIFFRNSV 183

Query: 188 ATGEIYPLESEIRICDECKTGDVVTIELADS--RLINHTRGKEYKLKPIGDAGPVIQAGG 247
           ATGE++PLESE+R+C+ECKTGD VTIEL+DS   L NHT GK YKLK IGDAGPVI AGG
Sbjct: 184 ATGEVFPLESEVRVCEECKTGDTVTIELSDSGGLLTNHTTGKNYKLKSIGDAGPVIDAGG 243

Query: 248 IFAYARKTGMIPSHA 256
           IFAYAR  GMIPS A
Sbjct: 244 IFAYARMMGMIPSLA 256

[Close]

BLAST of CmaCh15G011110 vs. ExPASy Swiss-Prot
Match: B5YHE5 (3-isopropylmalate dehydratase small subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) OX=289376 GN=leuD PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.9e-28
Identity = 75/170 (44.12%), Postives = 102/170 (60.00%), Query Frame = 0


Query: 79  GFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVESNEMKTKY 138
           G  +  GDNIDTD IIPA YL     N S+ ++L  H +    SS+ ++    +      
Sbjct: 5   GKVWKFGDNIDTDAIIPARYL-----NTSDPKELAKHVMEDADSSFPSKVKPGD------ 64

Query: 139 SIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICD 198
            IIIAG NFGCGSSREHAP+A+ ASG  AV+A+SYARIFFRN+   G   P+     + D
Sbjct: 65  -IIIAGRNFGCGSSREHAPIAIKASGIRAVIAKSYARIFFRNAFNIG--LPIFEVPELID 124

Query: 199 ECKTGDVVTIELADSRLINHTRGKEYKLKPIGD-AGPVIQAGGIFAYARK 248
           E   GD V I++   ++IN T+GK+Y  KPI      +I+AGG+  + +K
Sbjct: 125 ETNEGDEVEIDMNSGQIINLTKGKKYNTKPIPPFMQELIKAGGLVEWTKK 160

[Close]

BLAST of CmaCh15G011110 vs. ExPASy Swiss-Prot
Match: Q9WZ25 (3-isopropylmalate dehydratase small subunit 2 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=leuD2 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.7e-26
Identity = 69/170 (40.59%), Postives = 105/170 (61.76%), Query Frame = 0


Query: 79  GFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVESNEMKTKY 138
           G  +V GDN++TD+IIPA YL     N S+ ++L  + +      +  R         K 
Sbjct: 7   GKVFVFGDNVNTDEIIPARYL-----NTSDPQELAKYCMEDARPGFGRR------DDIKG 66

Query: 139 SIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICD 198
           SII+AG+NFGCGSSREHAPVA+ A+G   V+A+S+ARIFFRN++  G   P+  E++  D
Sbjct: 67  SIIVAGENFGCGSSREHAPVAIKAAGISCVIAKSFARIFFRNAINIG--LPI-VELKEAD 126

Query: 199 ECKTGDVVTIELADSRLINHTRGKEYKLKPIGD-AGPVIQAGGIFAYARK 248
           E + GD+  ++L +  + N T+GKEY+++P  +    +++AGG   Y  K
Sbjct: 127 EFEEGDIAEVDLENGVVRNLTKGKEYRIRPYPEFLMKIMEAGGWLEYCLK 162

[Close]

BLAST of CmaCh15G011110 vs. ExPASy TrEMBL
Match: A0A6J1ID74 (3-isopropylmalate dehydratase small subunit 3-like OS=Cucurbita maxima OX=3661 GN=LOC111471515 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 9.2e-139
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60
           MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL
Sbjct: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60

Query: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120
           PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL
Sbjct: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120

Query: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240
           SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG
Sbjct: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240

Query: 241 IFAYARKTGMIPSHAQ 257
           IFAYARKTGMIPSHAQ
Sbjct: 241 IFAYARKTGMIPSHAQ 256

[Close]

BLAST of CmaCh15G011110 vs. ExPASy TrEMBL
Match: A0A6J1E3Q1 (3-isopropylmalate dehydratase small subunit 3-like OS=Cucurbita moschata OX=3662 GN=LOC111430309 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 9.6e-128
Identity = 240/248 (96.77%), Postives = 240/248 (96.77%), Query Frame = 0


Query: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60
           MATA FVSVSPFATSTPRSSPSIS LSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAA IL
Sbjct: 1   MATAPFVSVSPFATSTPRSSPSISLLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAASIL 60

Query: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120
           PRATA PS AVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL
Sbjct: 61  PRATAAPSSAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120

Query: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240
           SVATGEIYPLESEIRICDECKTGDVVTIELAD RLINHT G EYKLKPIGDAGPVIQAGG
Sbjct: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADGRLINHTTGNEYKLKPIGDAGPVIQAGG 240

Query: 241 IFAYARKT 249
           IFAYARKT
Sbjct: 241 IFAYARKT 248

[Close]

BLAST of CmaCh15G011110 vs. ExPASy TrEMBL
Match: A0A5A7T900 (3-isopropylmalate dehydratase small subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00620 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 8.7e-113
Identity = 214/253 (84.58%), Postives = 228/253 (90.12%), Query Frame = 0


Query: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60
           MA + F+S SP A STPRSSPS+S LS P+T+KFP+ YSN L DLS  VSHA  R A I+
Sbjct: 1   MAASLFLSRSPIAISTPRSSPSVSLLSSPQTLKFPSSYSNSLFDLSIAVSHATPRLATII 60

Query: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120
           PRATA+PS    S+T FHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGS+AL+GL
Sbjct: 61  PRATASPSSTAPSATAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTRFVES+EMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESDEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240
           SVATGEIYPLESE RICDECKTGDVVTIELA+SRLINHT GKEYKLKPIGDAGPVI+AGG
Sbjct: 181 SVATGEIYPLESETRICDECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 241 IFAYARKTGMIPS 254
           IFAYARKTGMI S
Sbjct: 241 IFAYARKTGMISS 253

[Close]

BLAST of CmaCh15G011110 vs. ExPASy TrEMBL
Match: A0A1S3AT32 (3-isopropylmalate dehydratase small subunit 3-like OS=Cucumis melo OX=3656 GN=LOC103482595 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 8.7e-113
Identity = 214/253 (84.58%), Postives = 228/253 (90.12%), Query Frame = 0


Query: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60
           MA + F+S SP A STPRSSPS+S LS P+T+KFP+ YSN L DLS  VSHA  R A I+
Sbjct: 1   MAASLFLSRSPIAISTPRSSPSVSLLSSPQTLKFPSSYSNSLFDLSIAVSHATPRLATII 60

Query: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120
           PRATA+PS    S+T FHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGS+AL+GL
Sbjct: 61  PRATASPSSTAPSATAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTRFVES+EMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESDEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240
           SVATGEIYPLESE RICDECKTGDVVTIELA+SRLINHT GKEYKLKPIGDAGPVI+AGG
Sbjct: 181 SVATGEIYPLESETRICDECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 241 IFAYARKTGMIPS 254
           IFAYARKTGMI S
Sbjct: 241 IFAYARKTGMISS 253

[Close]

BLAST of CmaCh15G011110 vs. ExPASy TrEMBL
Match: A0A6J1H3H6 (3-isopropylmalate dehydratase small subunit 3-like OS=Cucurbita moschata OX=3662 GN=LOC111459316 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.9e-112
Identity = 213/253 (84.19%), Postives = 231/253 (91.30%), Query Frame = 0


Query: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60
           MA + ++S SP AT+T RSSP IS L PP++IKFP+F+ + L DLS T SHA  RAA I+
Sbjct: 3   MAASLYLSQSPIATATRRSSPFIS-LLPPQSIKFPSFHCHTLKDLSITASHASQRAATII 62

Query: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120
           PRA ATPS A SS+TVFHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGS+AL+GL
Sbjct: 63  PRAAATPSSAASSTTVFHGSCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 122

Query: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTRFVE NEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 123 PSSYSTRFVEPNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 182

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240
           SV+TGEIYPLESEIRICDECKTGDV+TIELA+SRLINHT GKEYKLKPIGDAGPVI+AGG
Sbjct: 183 SVSTGEIYPLESEIRICDECKTGDVLTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 242

Query: 241 IFAYARKTGMIPS 254
           IFAYARK+GMIPS
Sbjct: 243 IFAYARKSGMIPS 254

[Close]

BLAST of CmaCh15G011110 vs. NCBI nr
Match: XP_022972989.1 (3-isopropylmalate dehydratase small subunit 3-like [Cucurbita maxima])

HSP 1 Score: 502.7 bits (1293), Expect = 1.9e-138
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60
           MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL
Sbjct: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60

Query: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120
           PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL
Sbjct: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120

Query: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240
           SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG
Sbjct: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240

Query: 241 IFAYARKTGMIPSHAQ 257
           IFAYARKTGMIPSHAQ
Sbjct: 241 IFAYARKTGMIPSHAQ 256

[Close]

BLAST of CmaCh15G011110 vs. NCBI nr
Match: KAG7016880.1 (3-isopropylmalate dehydratase small subunit 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 481.1 bits (1237), Expect = 5.9e-132
Identity = 248/256 (96.88%), Postives = 248/256 (96.88%), Query Frame = 0


Query: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60
           MATA FVSVSPFATSTPRSSPSIS LSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAA IL
Sbjct: 1   MATAPFVSVSPFATSTPRSSPSISLLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAASIL 60

Query: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120
           PRATA PS AVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL
Sbjct: 61  PRATAAPSSAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120

Query: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240
           SVATGEIYPLESEIRICDECKTGDVVTIELAD RLINHT GKEYKLKPIGDAGPVIQAGG
Sbjct: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADGRLINHTTGKEYKLKPIGDAGPVIQAGG 240

Query: 241 IFAYARKTGMIPSHAQ 257
           IFAYARKTGMIPS AQ
Sbjct: 241 IFAYARKTGMIPSPAQ 256

[Close]

BLAST of CmaCh15G011110 vs. NCBI nr
Match: KAG6579402.1 (3-isopropylmalate dehydratase small subunit 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 479.6 bits (1233), Expect = 1.7e-131
Identity = 247/256 (96.48%), Postives = 249/256 (97.27%), Query Frame = 0


Query: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60
           MATA FVSVSPFATSTPRSSPSIS LSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAA IL
Sbjct: 1   MATAPFVSVSPFATSTPRSSPSISLLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAASIL 60

Query: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120
           PRATA+PS AVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL
Sbjct: 61  PRATASPSSAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120

Query: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTRFVES+EMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESDEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240
           SVATGEIYPLESEIRICDECKTGDVVTIELAD RLINHT GKEYKLKPIGDAGPVIQAGG
Sbjct: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADGRLINHTTGKEYKLKPIGDAGPVIQAGG 240

Query: 241 IFAYARKTGMIPSHAQ 257
           IFAYARKTGMIPS AQ
Sbjct: 241 IFAYARKTGMIPSPAQ 256

[Close]

BLAST of CmaCh15G011110 vs. NCBI nr
Match: XP_022922281.1 (3-isopropylmalate dehydratase small subunit 3-like [Cucurbita moschata])

HSP 1 Score: 466.1 bits (1198), Expect = 2.0e-127
Identity = 240/248 (96.77%), Postives = 240/248 (96.77%), Query Frame = 0


Query: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60
           MATA FVSVSPFATSTPRSSPSIS LSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAA IL
Sbjct: 1   MATAPFVSVSPFATSTPRSSPSISLLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAASIL 60

Query: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120
           PRATA PS AVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL
Sbjct: 61  PRATAAPSSAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120

Query: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240
           SVATGEIYPLESEIRICDECKTGDVVTIELAD RLINHT G EYKLKPIGDAGPVIQAGG
Sbjct: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADGRLINHTTGNEYKLKPIGDAGPVIQAGG 240

Query: 241 IFAYARKT 249
           IFAYARKT
Sbjct: 241 IFAYARKT 248

[Close]

BLAST of CmaCh15G011110 vs. NCBI nr
Match: XP_023550722.1 (3-isopropylmalate dehydratase small subunit 3-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 463.4 bits (1191), Expect = 1.3e-126
Identity = 238/249 (95.58%), Postives = 239/249 (95.98%), Query Frame = 0


Query: 1   MATAAFVSVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAAIIL 60
           M TA  VSVS FATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAA IL
Sbjct: 1   MTTAPSVSVSTFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDLSTTVSHAPSRAASIL 60

Query: 61  PRATATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120
           PRATATPS A SSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL
Sbjct: 61  PRATATPSSAASSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGL 120

Query: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180
           PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 181 SVATGEIYPLESEIRICDECKTGDVVTIELADSRLINHTRGKEYKLKPIGDAGPVIQAGG 240
           SVATGEIYPLESEIR+CDECKTGDVVTIELAD  LINHT GKEYKLKPIGDAGPVIQAGG
Sbjct: 181 SVATGEIYPLESEIRVCDECKTGDVVTIELADGCLINHTTGKEYKLKPIGDAGPVIQAGG 240

Query: 241 IFAYARKTG 250
           IFAYARKTG
Sbjct: 241 IFAYARKTG 249

[Close]

BLAST of CmaCh15G011110 vs. TAIR 10
Match: AT2G43090.1 (Aconitase/3-isopropylmalate dehydratase protein )

HSP 1 Score: 315.5 bits (807), Expect = 4.0e-86
Identity = 168/253 (66.40%), Postives = 192/253 (75.89%), Query Frame = 0


Query: 13  ATSTPRSSPSISH--LSPPRTIKFPTFYSNFLNDLSTTVSH------APSRAAIILPRAT 72
           A S   ++P++S    SP +   F TF S FL   ST+V+       +   ++  + R+ 
Sbjct: 2   AASLQSANPTLSRTLASPNKPSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFVTRSA 61

Query: 73  ATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSY 132
           A P         FHG CYVVGDNIDTDQIIPAE+LTLVPSNP EYEKLGS+ALVGLP+SY
Sbjct: 62  AEP----QERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGLPASY 121

Query: 133 STRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVAT 192
             RFV+  EMKTKYSIII G+NFGCGSSREHAPV LGA+GA AVVA+SYARIFFRNSVAT
Sbjct: 122 KERFVQPGEMKTKYSIIIGGENFGCGSSREHAPVCLGAAGAKAVVAQSYARIFFRNSVAT 181

Query: 193 GEIYPLESEIRICDECKTGDVVTIEL--ADSRLINHTRGKEYKLKPIGDAGPVIQAGGIF 252
           GE+YPL+SE+R+CDEC TGDV T+EL   DS LINHT GKEYKLKPIGDAGPVI AGGIF
Sbjct: 182 GEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIF 241

Query: 253 AYARKTGMIPSHA 256
           AYARK GMIPS A
Sbjct: 242 AYARKAGMIPSAA 250

[Close]

BLAST of CmaCh15G011110 vs. TAIR 10
Match: AT3G58990.1 (isopropylmalate isomerase 1 )

HSP 1 Score: 285.4 bits (729), Expect = 4.5e-77
Identity = 152/219 (69.41%), Postives = 170/219 (77.63%), Query Frame = 0


Query: 42  LNDLSTTVSHAP--SRAAIILPRATATPSYAVSSST--VFHGFCYVVGDNIDTDQIIPAE 101
           L   ST  ++ P  S +A I+ R  A+ S +  S T   FHG C+V+ DNIDTDQIIPAE
Sbjct: 34  LKSASTIFNYKPLTSSSATIITRVAASSSDSGESITRETFHGLCFVLKDNIDTDQIIPAE 93

Query: 102 YLTLVPSNPSEYEKLGSHALVGLPSSYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAP 161
           Y TL+PS P + EKLGS AL GLP  Y+ RFV   EMK+KYS+II GDNFGCGSSREHAP
Sbjct: 94  YGTLIPSIPEDREKLGSFALNGLPKFYNERFVVPGEMKSKYSVIIGGDNFGCGSSREHAP 153

Query: 162 VALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICDECKTGDVVTIELAD---SR 221
           V LGA+GA AVVAESYARIFFRN VATGEI+PLESE+RICDECKTGDVVTIE  +   S 
Sbjct: 154 VCLGAAGAKAVVAESYARIFFRNCVATGEIFPLESEVRICDECKTGDVVTIEHKEDGSSL 213

Query: 222 LINHTRGKEYKLKPIGDAGPVIQAGGIFAYARKTGMIPS 254
           LINHT  KEYKLKP+GDAGPVI AGGIFAYARK GMIPS
Sbjct: 214 LINHTTRKEYKLKPLGDAGPVIDAGGIFAYARKAGMIPS 252

[Close]

BLAST of CmaCh15G011110 vs. TAIR 10
Match: AT2G43100.1 (isopropylmalate isomerase 2 )

HSP 1 Score: 268.1 bits (684), Expect = 7.4e-72
Identity = 148/255 (58.04%), Postives = 179/255 (70.20%), Query Frame = 0


Query: 8   SVSPFATSTPRSSPSISHLSPPRTIKFPTFYSNFLNDL---STTVSHAPSRAAIILPRAT 67
           S+  F  + P SS   S  S   T + P    N    L   S +++   + +  I+PRA 
Sbjct: 4   SLPTFPQALPCSSTKTS--SSLATFRSPFLRFNGSTSLIPSSISITSRGTSSPTIIPRAA 63

Query: 68  ATPSYA--VSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPS 127
           A+ S +    ++T FHG CYV+ DNIDTDQIIPA      PSN  E +++ +HAL GLP 
Sbjct: 64  ASESDSNEALANTTFHGLCYVLKDNIDTDQIIPAGAACTFPSNQQERDEIAAHALSGLPD 123

Query: 128 SYSTRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSV 187
            + TRF+E  E ++KYSIII G+NFGCGSSREHAPV LGA+GA A+VAESYARIFFRNSV
Sbjct: 124 FHKTRFIEPGENRSKYSIIIGGENFGCGSSREHAPVCLGAAGAKAIVAESYARIFFRNSV 183

Query: 188 ATGEIYPLESEIRICDECKTGDVVTIELADS--RLINHTRGKEYKLKPIGDAGPVIQAGG 247
           ATGE++PLESE+R+C+ECKTGD VTIEL+DS   L NHT GK YKLK IGDAGPVI AGG
Sbjct: 184 ATGEVFPLESEVRVCEECKTGDTVTIELSDSGGLLTNHTTGKNYKLKSIGDAGPVIDAGG 243

Query: 248 IFAYARKTGMIPSHA 256
           IFAYAR  GMIPS A
Sbjct: 244 IFAYARMMGMIPSLA 256

[Close]

BLAST of CmaCh15G011110 vs. TAIR 10
Match: AT2G43090.2 (Aconitase/3-isopropylmalate dehydratase protein )

HSP 1 Score: 248.4 bits (633), Expect = 6.0e-66
Identity = 143/253 (56.52%), Postives = 166/253 (65.61%), Query Frame = 0


Query: 13  ATSTPRSSPSISH--LSPPRTIKFPTFYSNFLNDLSTTVSH------APSRAAIILPRAT 72
           A S   ++P++S    SP +   F TF S FL   ST+V+       +   ++  + R+ 
Sbjct: 2   AASLQSANPTLSRTLASPNKPSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFVTRSA 61

Query: 73  ATPSYAVSSSTVFHGFCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSHALVGLPSSY 132
           A P         FHG CYVVGDNIDTDQIIPAE+LTLVPSNP EYEKLGS+ALVGLP+SY
Sbjct: 62  AEP----QERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGLPASY 121

Query: 133 STRFVESNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVAT 192
             RFV+                              GA+GA AVVA+SYARIFFRNSVAT
Sbjct: 122 KERFVQP-----------------------------GAAGAKAVVAQSYARIFFRNSVAT 181

Query: 193 GEIYPLESEIRICDECKTGDVVTIEL--ADSRLINHTRGKEYKLKPIGDAGPVIQAGGIF 252
           GE+YPL+SE+R+CDEC TGDV T+EL   DS LINHT GKEYKLKPIGDAGPVI AGGIF
Sbjct: 182 GEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIF 221

Query: 253 AYARKTGMIPSHA 256
           AYARK GMIPS A
Sbjct: 242 AYARKAGMIPSAA 221

The following BLAST results are available for this feature:

BLAST of CmaCh15G011110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZW85	5.7e-85	66.40	3-isopropylmalate dehydratase small subunit 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LYT7	6.3e-76	69.41	3-isopropylmalate dehydratase small subunit 3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9ZW84	1.0e-70	58.04	3-isopropylmalate dehydratase small subunit 2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
B5YHE5	4.9e-28	44.12	3-isopropylmalate dehydratase small subunit OS=Thermodesulfovibrio yellowstonii ...	[more]
Q9WZ25	2.7e-26	40.59	3-isopropylmalate dehydratase small subunit 2 OS=Thermotoga maritima (strain ATC...	[more]

BLAST of CmaCh15G011110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ID74	9.2e-139	100.00	3-isopropylmalate dehydratase small subunit 3-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1E3Q1	9.6e-128	96.77	3-isopropylmalate dehydratase small subunit 3-like OS=Cucurbita moschata OX=3662...	[more]
A0A5A7T900	8.7e-113	84.58	3-isopropylmalate dehydratase small subunit 3-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3AT32	8.7e-113	84.58	3-isopropylmalate dehydratase small subunit 3-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1H3H6	1.9e-112	84.19	3-isopropylmalate dehydratase small subunit 3-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of CmaCh15G011110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022972989.1	1.9e-138	100.00	3-isopropylmalate dehydratase small subunit 3-like [Cucurbita maxima]	[more]
KAG7016880.1	5.9e-132	96.88	3-isopropylmalate dehydratase small subunit 3, partial [Cucurbita argyrosperma s...	[more]
KAG6579402.1	1.7e-131	96.48	3-isopropylmalate dehydratase small subunit 1, partial [Cucurbita argyrosperma s...	[more]
XP_022922281.1	2.0e-127	96.77	3-isopropylmalate dehydratase small subunit 3-like [Cucurbita moschata]	[more]
XP_023550722.1	1.3e-126	95.58	3-isopropylmalate dehydratase small subunit 3-like isoform X2 [Cucurbita pepo su...	[more]

BLAST of CmaCh15G011110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43090.1	4.0e-86	66.40	Aconitase/3-isopropylmalate dehydratase protein	[more]
AT3G58990.1	4.5e-77	69.41	isopropylmalate isomerase 1	[more]
AT2G43100.1	7.4e-72	58.04	isopropylmalate isomerase 2	[more]
AT2G43090.2	6.0e-66	56.52	Aconitase/3-isopropylmalate dehydratase protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015928	Aconitase/3-isopropylmalate dehydratase, swivel	GENE3D	3.20.19.10	Aconitase, domain 4	coord: 74..251 e-value: 1.2E-42 score: 147.4
IPR000573	Aconitase A/isopropylmalate dehydratase small subunit, swivel domain	PFAM	PF00694	Aconitase_C	coord: 133..190 e-value: 2.6E-17 score: 63.4
IPR011827	Hydrolyase LeuD/HacB/DmdB	TIGRFAM	TIGR02087	TIGR02087	coord: 81..247 e-value: 1.9E-35 score: 119.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR43345	3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED	coord: 1..255
None	No IPR available	PANTHER	PTHR43345:SF8	BNAA05G34440D PROTEIN	coord: 1..255
None	No IPR available	SUPERFAMILY	52016	LeuD/IlvD-like	coord: 76..252
IPR033940	3-isopropylmalate dehydratase, swivel domain	CDD	cd01577	IPMI_Swivel	coord: 83..210 e-value: 7.62767E-37 score: 123.468

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G011110.1	CmaCh15G011110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043436	oxoacid metabolic process
molecular_function	GO:0016836	hydro-lyase activity