CmaCh15G009830 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G009830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Pectin lyase-like superfamily protein
Location	Cma_Chr15: 5595280 .. 5595666 (+)
RNA-Seq Expression	CmaCh15G009830
Synteny	CmaCh15G009830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATACGTCTTCTGGATTACTGGAGACTACAAATCGCATGCAGATGACAAGTTTGATCCCTCAGCGTTGCTGGTGATTAAGAACATTAATTACAGAGATATGGTGGCTGAGAATGTTAATATGTCGGCGAATTTGGAAGGGATATCGGGAGATCCATTCACAGATATTTGTATTTCGAATGTGAAGACTGGATTGTCGAAGAAGCCTAAAAAGTTGCAGTGGAACTGTACGGAAGTTGAGGGATTTAGTAGCGATGTGGATCCGCCGCCATATGCTCCATTGGCTAAGGCACCGAAAAGTGGTGGATGTGCCTTTCCTGAAGATAAGCTGCCAATTGAGAATGTTCAGTTGAAGTCGTGCTCGGTTGAAATTCCTGCCTTCTAG

mRNA sequence

ATGAAATACGTCTTCTGGATTACTGGAGACTACAAATCGCATGCAGATGACAAGTTTGATCCCTCAGCGTTGCTGGTGATTAAGAACATTAATTACAGAGATATGGTGGCTGAGAATGTTAATATGTCGGCGAATTTGGAAGGGATATCGGGAGATCCATTCACAGATATTTGTATTTCGAATGTGAAGACTGGATTGTCGAAGAAGCCTAAAAAGTTGCAGTGGAACTGTACGGAAGTTGAGGGATTTAGTAGCGATGTGGATCCGCCGCCATATGCTCCATTGGCTAAGGCACCGAAAAGTGGTGGATGTGCCTTTCCTGAAGATAAGCTGCCAATTGAGAATGTTCAGTTGAAGTCGTGCTCGGTTGAAATTCCTGCCTTCTAG

Coding sequence (CDS)

ATGAAATACGTCTTCTGGATTACTGGAGACTACAAATCGCATGCAGATGACAAGTTTGATCCCTCAGCGTTGCTGGTGATTAAGAACATTAATTACAGAGATATGGTGGCTGAGAATGTTAATATGTCGGCGAATTTGGAAGGGATATCGGGAGATCCATTCACAGATATTTGTATTTCGAATGTGAAGACTGGATTGTCGAAGAAGCCTAAAAAGTTGCAGTGGAACTGTACGGAAGTTGAGGGATTTAGTAGCGATGTGGATCCGCCGCCATATGCTCCATTGGCTAAGGCACCGAAAAGTGGTGGATGTGCCTTTCCTGAAGATAAGCTGCCAATTGAGAATGTTCAGTTGAAGTCGTGCTCGGTTGAAATTCCTGCCTTCTAG

Protein sequence

MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICISNVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPLAKAPKSGGCAFPEDKLPIENVQLKSCSVEIPAF

Homology

[Close]

BLAST of CmaCh15G009830 vs. ExPASy Swiss-Prot
Match: A7PZL3 (Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.3e-34
Identity = 71/127 (55.91%), Postives = 88/127 (69.29%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MK+ FW+TG+Y SHAD+ +DP A  VI+ INYRDMVAENV+M+A LEGI  DPFT ICIS
Sbjct: 361 MKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICIS 420

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPLAK--APKSGGCAFPEDKLPIENVQL 120
           NV   L+ K KK+ W CT+VEG SS V P P + L      K+  C FP + LPI+ V+L
Sbjct: 421 NVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLCNFPAESLPIDTVEL 480

Query: 121 KSCSVEI 126
           + CS  I
Sbjct: 481 QKCSYGI 487

[Close]

BLAST of CmaCh15G009830 vs. ExPASy TrEMBL
Match: A0A6J1I677 (probable polygalacturonase OS=Cucurbita maxima OX=3661 GN=LOC111471479 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.2e-63
Identity = 118/128 (92.19%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MKYVFW+TGDYKSHADDKFDPSAL VIKNINYRD+VAENVNMSANL GISGDPFTDIC+S
Sbjct: 387 MKYVFWMTGDYKSHADDKFDPSALPVIKNINYRDVVAENVNMSANLAGISGDPFTDICMS 446

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPLAKAPKSGGCAFPEDKLPIENVQLKS 120
           NVK GLSKKPKKLQWNCT+VEGFSSDVDPPP APLAKA KSGGC FPEDKLPIENVQLKS
Sbjct: 447 NVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAAKSGGCDFPEDKLPIENVQLKS 506

Query: 121 CSVEIPAF 129
           CSVEIPAF
Sbjct: 507 CSVEIPAF 514

[Close]

BLAST of CmaCh15G009830 vs. ExPASy TrEMBL
Match: A0A6J1E3E2 (probable polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111430236 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.2e-62
Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MKYVFW+TGDYKSHADDKFDPSA+ VIKNINYRD+VAENVNMSANL GISGDPFTDIC+S
Sbjct: 354 MKYVFWMTGDYKSHADDKFDPSAMPVIKNINYRDVVAENVNMSANLAGISGDPFTDICMS 413

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPLAKAPKSGGCAFPEDKLPIENVQLKS 120
           NVK GLSKKPKKLQWNCT+VEGFSSDVDPPP APLAKA KSGGC FPEDKLPIENV+LKS
Sbjct: 414 NVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAAKSGGCDFPEDKLPIENVELKS 473

Query: 121 CSVEIPAF 129
           CSVEIPAF
Sbjct: 474 CSVEIPAF 481

[Close]

BLAST of CmaCh15G009830 vs. ExPASy TrEMBL
Match: A0A6J1E7Y4 (probable polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111430234 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MKYVFW+TGDYKSHADDKFDPSAL VIKNINYRD+VAENVNMSANL GISGDPFTDIC+S
Sbjct: 471 MKYVFWMTGDYKSHADDKFDPSALPVIKNINYRDVVAENVNMSANLAGISGDPFTDICMS 530

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPLAKAPKSGGCAFPEDKLPIENVQLKS 120
           NVK GLSKKPKKLQWNCT+VEGFSSDVDPPP APLAKA K+GGC FPEDKLPIENV+LKS
Sbjct: 531 NVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKS 590

Query: 121 CSVEIPAF 129
           CSVEIPAF
Sbjct: 591 CSVEIPAF 598

[Close]

BLAST of CmaCh15G009830 vs. ExPASy TrEMBL
Match: A0A6J1IBV8 (probable polygalacturonase OS=Cucurbita maxima OX=3661 GN=LOC111471546 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.5e-60
Identity = 113/128 (88.28%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MKYVFW+TGDYKSHADDKFDPSAL VIKNINYRD+VAENV MSANL GISGD FTDIC+S
Sbjct: 353 MKYVFWMTGDYKSHADDKFDPSALPVIKNINYRDVVAENVTMSANLAGISGDLFTDICVS 412

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPLAKAPKSGGCAFPEDKLPIENVQLKS 120
           NVK GLS KPKK+QWNCT++EGFSSDVDPPP APLAKA KSGGC FPEDKLPIENVQLKS
Sbjct: 413 NVKIGLSVKPKKVQWNCTDIEGFSSDVDPPPCAPLAKAAKSGGCDFPEDKLPIENVQLKS 472

Query: 121 CSVEIPAF 129
           CSVEIPAF
Sbjct: 473 CSVEIPAF 480

[Close]

BLAST of CmaCh15G009830 vs. ExPASy TrEMBL
Match: A0A6J1E7Z5 (probable polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111430246 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.6e-59
Identity = 111/128 (86.72%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MKYVFWITGDYKSHADDKFDPSAL +IKNINYRD+VAENVNMSANL GISGDPFTDIC+S
Sbjct: 353 MKYVFWITGDYKSHADDKFDPSALPLIKNINYRDVVAENVNMSANLAGISGDPFTDICVS 412

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPLAKAPKSGGCAFPEDKLPIENVQLKS 120
           NVK GLS  PKKLQWNCT +EGF SDVDPPP APLAKA KSGGC FPED+LPIENVQLKS
Sbjct: 413 NVKIGLSATPKKLQWNCTNIEGFCSDVDPPPCAPLAKAAKSGGCDFPEDQLPIENVQLKS 472

Query: 121 CSVEIPAF 129
           C VEIP F
Sbjct: 473 CLVEIPTF 480

[Close]

BLAST of CmaCh15G009830 vs. NCBI nr
Match: XP_022972957.1 (probable polygalacturonase [Cucurbita maxima])

HSP 1 Score: 250.8 bits (639), Expect = 6.5e-63
Identity = 118/128 (92.19%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MKYVFW+TGDYKSHADDKFDPSAL VIKNINYRD+VAENVNMSANL GISGDPFTDIC+S
Sbjct: 387 MKYVFWMTGDYKSHADDKFDPSALPVIKNINYRDVVAENVNMSANLAGISGDPFTDICMS 446

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPLAKAPKSGGCAFPEDKLPIENVQLKS 120
           NVK GLSKKPKKLQWNCT+VEGFSSDVDPPP APLAKA KSGGC FPEDKLPIENVQLKS
Sbjct: 447 NVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAAKSGGCDFPEDKLPIENVQLKS 506

Query: 121 CSVEIPAF 129
           CSVEIPAF
Sbjct: 507 CSVEIPAF 514

[Close]

BLAST of CmaCh15G009830 vs. NCBI nr
Match: XP_023520463.1 (probable polygalacturonase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.8 bits (639), Expect = 6.5e-63
Identity = 119/127 (93.70%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MKYVFW+TGDYKSHADDKFDPSAL VIKNINYRD+VAENVNMSANL GISGDPFTDICIS
Sbjct: 353 MKYVFWMTGDYKSHADDKFDPSALPVIKNINYRDVVAENVNMSANLAGISGDPFTDICIS 412

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPLAKAPKSGGCAFPEDKLPIENVQLKS 120
           NVK GLSKKPKKLQWNCTEVEGFSSDVDPPP APLAKA KSGGC FPEDKLPIENVQLKS
Sbjct: 413 NVKIGLSKKPKKLQWNCTEVEGFSSDVDPPPCAPLAKASKSGGCDFPEDKLPIENVQLKS 472

Query: 121 CSVEIPA 128
           CSVEIPA
Sbjct: 473 CSVEIPA 479

[Close]

BLAST of CmaCh15G009830 vs. NCBI nr
Match: XP_022922171.1 (probable polygalacturonase [Cucurbita moschata])

HSP 1 Score: 248.8 bits (634), Expect = 2.5e-62
Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MKYVFW+TGDYKSHADDKFDPSA+ VIKNINYRD+VAENVNMSANL GISGDPFTDIC+S
Sbjct: 354 MKYVFWMTGDYKSHADDKFDPSAMPVIKNINYRDVVAENVNMSANLAGISGDPFTDICMS 413

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPLAKAPKSGGCAFPEDKLPIENVQLKS 120
           NVK GLSKKPKKLQWNCT+VEGFSSDVDPPP APLAKA KSGGC FPEDKLPIENV+LKS
Sbjct: 414 NVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAAKSGGCDFPEDKLPIENVELKS 473

Query: 121 CSVEIPAF 129
           CSVEIPAF
Sbjct: 474 CSVEIPAF 481

[Close]

BLAST of CmaCh15G009830 vs. NCBI nr
Match: XP_022922170.1 (probable polygalacturonase [Cucurbita moschata])

HSP 1 Score: 248.1 bits (632), Expect = 4.2e-62
Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MKYVFW+TGDYKSHADDKFDPSAL VIKNINYRD+VAENVNMSANL GISGDPFTDIC+S
Sbjct: 471 MKYVFWMTGDYKSHADDKFDPSALPVIKNINYRDVVAENVNMSANLAGISGDPFTDICMS 530

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPLAKAPKSGGCAFPEDKLPIENVQLKS 120
           NVK GLSKKPKKLQWNCT+VEGFSSDVDPPP APLAKA K+GGC FPEDKLPIENV+LKS
Sbjct: 531 NVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKS 590

Query: 121 CSVEIPAF 129
           CSVEIPAF
Sbjct: 591 CSVEIPAF 598

[Close]

BLAST of CmaCh15G009830 vs. NCBI nr
Match: XP_023550019.1 (probable polygalacturonase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.9 bits (629), Expect = 9.4e-62
Identity = 117/128 (91.41%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MKYVFW+TG+YK+HADDKFDPSAL VIKNINYRDMVAENVNMSANL GISGDPFTDICIS
Sbjct: 353 MKYVFWMTGNYKAHADDKFDPSALPVIKNINYRDMVAENVNMSANLVGISGDPFTDICIS 412

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPLAKAPKSGGCAFPEDKLPIENVQLKS 120
           NVK GLSKKPKKLQWNCT+VEGFSSDVDPPP APLAKA KSGGC FPEDKLPIENVQLKS
Sbjct: 413 NVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAAKSGGCDFPEDKLPIENVQLKS 472

Query: 121 CSVEIPAF 129
           CSVEI AF
Sbjct: 473 CSVEISAF 480

[Close]

BLAST of CmaCh15G009830 vs. TAIR 10
Match: AT4G23500.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 153.7 bits (387), Expect = 1.0e-37
Identity = 76/125 (60.80%), Postives = 89/125 (71.20%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MKYVFW+TG Y SH DD +DP AL VI+NINY+DMVAENV M A L GISGD FT ICIS
Sbjct: 366 MKYVFWMTGSYGSHPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICIS 425

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPLAKAPKSGG----CAFPEDKLPIENV 120
           NV   LSKKPKK+ WNCT+V G++S V P P   L +  K  G    C FPED +PI+ V
Sbjct: 426 NVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPE--KQPGTVVPCNFPEDPIPIDEV 485

Query: 121 QLKSC 122
           +L+ C
Sbjct: 486 KLQRC 488

[Close]

BLAST of CmaCh15G009830 vs. TAIR 10
Match: AT3G48950.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 8.6e-37
Identity = 75/124 (60.48%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MKYVFW++G+Y SH D+ FDP AL  I NINYRDM AENV MSA+L+GI  DPFT ICIS
Sbjct: 344 MKYVFWMSGNYGSHPDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICIS 403

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYA--PLAKA-PKSGGCAFPEDKLPIENVQ 120
           NV   L+ K KK+QWNCT+V G +S V P P +  P  KA  K+  CAFP D +PIE+V 
Sbjct: 404 NVTIALAAKAKKMQWNCTDVAGVTSRVTPEPCSLLPEKKAQAKNVDCAFPSDLIPIESVV 463

Query: 121 LKSC 122
           LK C
Sbjct: 464 LKKC 467

[Close]

BLAST of CmaCh15G009830 vs. TAIR 10
Match: AT3G61490.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 9.5e-36
Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MK+VFW+TG+YK+HAD  +DP AL  I  INYRD+VAENV+M+  LEGISGDPFT ICIS
Sbjct: 343 MKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICIS 402

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPL--------AKAPKSGGCAFPEDKLP 120
           N    ++ K KK  W C++VEG +S VDP P   L         K    GGC FP D L 
Sbjct: 403 NATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQESETTKKKMIDGGCDFPTDVLE 462

Query: 121 IENVQLKSCSVEI 126
           I+NV+LK+CS ++
Sbjct: 463 IDNVELKTCSYQM 475

[Close]

BLAST of CmaCh15G009830 vs. TAIR 10
Match: AT3G61490.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 9.5e-36
Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MK+VFW+TG+YK+HAD  +DP AL  I  INYRD+VAENV+M+  LEGISGDPFT ICIS
Sbjct: 343 MKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICIS 402

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPL--------AKAPKSGGCAFPEDKLP 120
           N    ++ K KK  W C++VEG +S VDP P   L         K    GGC FP D L 
Sbjct: 403 NATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQESETTKKKMIDGGCDFPTDVLE 462

Query: 121 IENVQLKSCSVEI 126
           I+NV+LK+CS ++
Sbjct: 463 IDNVELKTCSYQM 475

[Close]

BLAST of CmaCh15G009830 vs. TAIR 10
Match: AT3G61490.3 (Pectin lyase-like superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 9.5e-36
Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 0


Query: 1   MKYVFWITGDYKSHADDKFDPSALLVIKNINYRDMVAENVNMSANLEGISGDPFTDICIS 60
           MK+VFW+TG+YK+HAD  +DP AL  I  INYRD+VAENV+M+  LEGISGDPFT ICIS
Sbjct: 343 MKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICIS 402

Query: 61  NVKTGLSKKPKKLQWNCTEVEGFSSDVDPPPYAPL--------AKAPKSGGCAFPEDKLP 120
           N    ++ K KK  W C++VEG +S VDP P   L         K    GGC FP D L 
Sbjct: 403 NATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQESETTKKKMIDGGCDFPTDVLE 462

Query: 121 IENVQLKSCSVEI 126
           I+NV+LK+CS ++
Sbjct: 463 IDNVELKTCSYQM 475

The following BLAST results are available for this feature:

BLAST of CmaCh15G009830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7PZL3	1.3e-34	55.91	Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 ...	[more]

BLAST of CmaCh15G009830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I677	3.2e-63	92.19	probable polygalacturonase OS=Cucurbita maxima OX=3661 GN=LOC111471479 PE=3 SV=1	[more]
A0A6J1E3E2	1.2e-62	90.63	probable polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111430236 PE=3 SV...	[more]
A0A6J1E7Y4	2.1e-62	90.63	probable polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111430234 PE=3 SV...	[more]
A0A6J1IBV8	2.5e-60	88.28	probable polygalacturonase OS=Cucurbita maxima OX=3661 GN=LOC111471546 PE=3 SV=1	[more]
A0A6J1E7Z5	1.6e-59	86.72	probable polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111430246 PE=3 SV...	[more]

BLAST of CmaCh15G009830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022972957.1	6.5e-63	92.19	probable polygalacturonase [Cucurbita maxima]	[more]
XP_023520463.1	6.5e-63	93.70	probable polygalacturonase [Cucurbita pepo subsp. pepo]	[more]
XP_022922171.1	2.5e-62	90.63	probable polygalacturonase [Cucurbita moschata]	[more]
XP_022922170.1	4.2e-62	90.63	probable polygalacturonase [Cucurbita moschata]	[more]
XP_023550019.1	9.4e-62	91.41	probable polygalacturonase [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh15G009830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23500.1	1.0e-37	60.80	Pectin lyase-like superfamily protein	[more]
AT3G48950.1	8.6e-37	60.48	Pectin lyase-like superfamily protein	[more]
AT3G61490.1	9.5e-36	54.14	Pectin lyase-like superfamily protein	[more]
AT3G61490.2	9.5e-36	54.14	Pectin lyase-like superfamily protein	[more]
AT3G61490.3	9.5e-36	54.14	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 1..87 e-value: 8.9E-7 score: 30.0
None	No IPR available	PANTHER	PTHR31339	PECTIN LYASE-RELATED	coord: 1..122
None	No IPR available	PANTHER	PTHR31339:SF12	ENDO-POLYGALACTURONASE-LIKE PROTEIN	coord: 1..122
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 2..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G009830.1	CmaCh15G009830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity