CmaCh15G006940 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G006940
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	selenoprotein K-like
Location	Cma_Chr15: 3318360 .. 3320721 (+)
RNA-Seq Expression	CmaCh15G006940
Synteny	CmaCh15G006940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCAAATCTGTAAAAATGGAAGCGGAAATTTCTAGTCGACCGAAGACTTACGAGAACGGTAATTCGACATCCAGCTTTAAGAATATCGCATTTCATTCGCTTCGACACCGAGAAGGCTCTGGAAAGTTTCTCCCATGGCGTACGTTGAACGAGGTTCTATCTCAATTTCTAATCAGTTCTATTTTGATTTCACTGCCGAGGGATTGGTTGATGACTTTAATTTGGAAATATTTTAGATTTTGTTTTCTAATTTCTGTCGTAGAATTGGGGATTTTGGTCCTCTTGTTGTCTTCAGAAATGATCCTTGGATGTTTTGGTTGTCCATGTATTTTATTCTAGTACTTTTCCGATTTCCCGTGGTATTGTGCATTCATGATTCTGGTTTCGATTTTGAGCTTAGTAGGTTAGATCCAGTATTTTTTTCTGGAAGACGTGGTATTCTTACGGCGCTTTGATTTGATTGCATATCTCTCGGTCTTTTTTCTAACTAATTGTTAGAAGCTTCCTGAATATTATGTTGTCAAATATGAAATGGAAAAATTGTACGCAAAAGATCAAACCACAGGAATGGAAATAAACGTAGGTCATGAATTTAATCACGAAAAGGGGAAGAATCCTCGAATTTTAGTTGAAAAGAGAGCGATGTTCTACGACGTAATGGAATGATAAGGAAAATAGAGAAATATGGTGGATGAGTTCGAGAAAATTTTAGTCATTTAATTACATAGATCAGACACATTGCTTGATGGTTTTATTATGTTACATGAGTTGAATTCTTATTTCATTACCTTGAACTTCAAATTTGGTGGTGCCATTTTATCAAGCTGTTACTGACACTTTAAAGATGAAGGTATTTGGTTCTCTCTCTGAGTGTGTGGATAAAGTGACAGCGGGTTTATTACTTTTCCACTCTATTTCTAGCTCTACACTTTTTTTATCAATTATATGGTTATAGACTTTAGTGAATTTAATTGAGGATAAAAGGCCTGGAAAATGGCTCTTCACTCAAAGGGTTACCATTCGTATAAGAGGAATTTTTTGTCTTTTCATTGTGAAATGCTGCGGGTCAATGTAAAATTAAAAATTGTATTGCATTTGCTTTTTGTTTATCTTGCTCTTCAGTGTTAGTGATCAATGTTAAGTCCATGTCTTAAAGCATGATATATTGCTTCTTTATGGCATCTATTTGTTAATCTCTACCTGATTGGGAGCAATCGACAAAGATCTTGTTAAATTTTGTGAAATCACCATAATTGTAACTGAATCAATGAGCTAAAATGTATTATATTCCCATGGTTTGGCAGTTTTTTCTTCATTCTCTGCAAGTGCTGGTTAAGAATTTGAATTTTTTTCATGCACCCTTAAAAATGTGCCAACGACATTAGGAGGTTATCAGGTAAAGTTTAATGTTCTCAACTTGGTATTGGGATTTCTCCTTTTGGTCGTCTGTTTAGCAGGATTCTCTGAGTGGCTTTTTGGGACAATAAGTTGTTGCCGTGTTGTTGATTCTGTTGAGCATTACTGACCAACTATGCACTTGCGTGATATCTTGTAGGCGTTGTGAAATCCCAGAGATCATTCTGGCGTCTCAAAACCATCACTGATTTCTTCTGGGCCATCGTAAACATTATTGGTGTGTTCTTTACCACCTTGTTTTCGGTAAGTTGTTCCTTATTCTTGCGCTGGAAAAACGGTAGCATTCAGAGCAACCATCATCTTGGGAAGGAAGATTAAGTTTCCATACTTCTTTGTAGATGGAAAAATCAGAGGCTTATAGAAAAGGATCCGGTTCTGGAAAGAAATGGGACGGTGGCGGCCCTGGAGGTCCTGGATCAGGGCCTTACGGTGGTCGTCCACGCGGTCCTCCTCGCAGTCTCGATAACGTTCGAGGGATCGATCATAGTAAGTTGAATGCTTATTTTTTGGAACTCTTTTCCCCCATACATTGATTTGATTTGTTTTGATTTATTTGTTGCTCCGAGATCTTAACTTATTGCAATCAGGTTCATTACCTGCTTGTGGCTCGTGCTGTGGCTAAATTTTGGCTGCTTCAATGGTGCGTCCGCATTAAGCTCTCTCTGTAGACGACGTTATTTCAATTTAAAATTGTGGGACGTGCTGTAAATGTCAATGGGAAATGATACCTTGGATTATATATTAGTATACTATATGCCAAACGAAAACGTAAATCCTTAATCTAATCTTTGTGCATGTATTATGATTATTAATCAAACGCTATTTGGCAAGTTATAAACAGTGGCAAACCTAAATCTTATTGGATGAAAGTGTCCCACATTGGTTCATTTAGGGAATGATCATGAGTTTATAATCTAAGAATACACTTTTCATTGTGTGAGGCCAG

mRNA sequence

CGCAAATCTGTAAAAATGGAAGCGGAAATTTCTAGTCGACCGAAGACTTACGAGAACGGTAATTCGACATCCAGCTTTAAGAATATCGCATTTCATTCGCTTCGACACCGAGAAGGCTCTGGAAAGTTTCTCCCATGGCGTACGTTGAACGAGATTTTGTTTTCTAATTTCTGTCGTAGAATTGGGGATTTTGGTCCTCTTGTTGTCTTCAGAAATGATCCTTGGATGTTTTGGTTGTCCATGTATTTTATTCTAGTACTTTTCCGATTTCCCGTGGTATTGTGCATTCATGATTCTGGTTTCGATTTTGAGCTTAGTAGGTTAGATCCAGTATTTTTTTCTGGAAGACGTGATGAAGGAGGTTATCAGGTAAAGTTTAATGTTCTCAACTTGGTATTGGGATTTCTCCTTTTGGTCGTCTGTTTAGCAGGATTCTCTGAGTGGCTTTTTGGGACAATAAGCGTTGTGAAATCCCAGAGATCATTCTGGCGTCTCAAAACCATCACTGATTTCTTCTGGGCCATCGTAAACATTATTGGTGTGTTCTTTACCACCTTGTTTTCGATGGAAAAATCAGAGGCTTATAGAAAAGGATCCGGTTCTGGAAAGAAATGGGACGGTGGCGGCCCTGGAGGTCCTGGATCAGGGCCTTACGGTGGTCGTCCACGCGGTCCTCCTCGCAGTCTCGATAACGTTCGAGGGATCGATCATAGTTCATTACCTGCTTGTGGCTCGTGCTGTGGCTAAATTTTGGCTGCTTCAATGGTGCGTCCGCATTAAGCTCTCTCTGTAGACGACGTTATTTCAATTTAAAATTGTGGGACGTGCTGTAAATGTCAATGGGAAATGATACCTTGGATTATATATTAGTATACTATATGCCAAACGAAAACGTAAATCCTTAATCTAATCTTTGTGCATGTATTATGATTATTAATCAAACGCTATTTGGCAAGTTATAAACAGTGGCAAACCTAAATCTTATTGGATGAAAGTGTCCCACATTGGTTCATTTAGGGAATGATCATGAGTTTATAATCTAAGAATACACTTTTCATTGTGTGAGGCCAG

Coding sequence (CDS)

ATGGAAGCGGAAATTTCTAGTCGACCGAAGACTTACGAGAACGGTAATTCGACATCCAGCTTTAAGAATATCGCATTTCATTCGCTTCGACACCGAGAAGGCTCTGGAAAGTTTCTCCCATGGCGTACGTTGAACGAGATTTTGTTTTCTAATTTCTGTCGTAGAATTGGGGATTTTGGTCCTCTTGTTGTCTTCAGAAATGATCCTTGGATGTTTTGGTTGTCCATGTATTTTATTCTAGTACTTTTCCGATTTCCCGTGGTATTGTGCATTCATGATTCTGGTTTCGATTTTGAGCTTAGTAGGTTAGATCCAGTATTTTTTTCTGGAAGACGTGATGAAGGAGGTTATCAGGTAAAGTTTAATGTTCTCAACTTGGTATTGGGATTTCTCCTTTTGGTCGTCTGTTTAGCAGGATTCTCTGAGTGGCTTTTTGGGACAATAAGCGTTGTGAAATCCCAGAGATCATTCTGGCGTCTCAAAACCATCACTGATTTCTTCTGGGCCATCGTAAACATTATTGGTGTGTTCTTTACCACCTTGTTTTCGATGGAAAAATCAGAGGCTTATAGAAAAGGATCCGGTTCTGGAAAGAAATGGGACGGTGGCGGCCCTGGAGGTCCTGGATCAGGGCCTTACGGTGGTCGTCCACGCGGTCCTCCTCGCAGTCTCGATAACGTTCGAGGGATCGATCATAGTTCATTACCTGCTTGTGGCTCGTGCTGTGGCTAA

Protein sequence

MEAEISSRPKTYENGNSTSSFKNIAFHSLRHREGSGKFLPWRTLNEILFSNFCRRIGDFGPLVVFRNDPWMFWLSMYFILVLFRFPVVLCIHDSGFDFELSRLDPVFFSGRRDEGGYQVKFNVLNLVLGFLLLVVCLAGFSEWLFGTISVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG

Homology

[Close]

BLAST of CmaCh15G006940 vs. ExPASy TrEMBL
Match: A0A6J1JVZ4 (selenoprotein K-like OS=Cucurbita maxima OX=3661 GN=LOC111489356 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 5.1e-46
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 150 VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 209
           VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG
Sbjct: 8   VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 67

Query: 210 SGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG 244
           SGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG
Sbjct: 68  SGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CmaCh15G006940 vs. ExPASy TrEMBL
Match: A0A6J1HI52 (selenoprotein K-like OS=Cucurbita moschata OX=3662 GN=LOC111464545 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.5e-45
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 150 VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 209
           VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG
Sbjct: 8   VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 67

Query: 210 SGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG 244
           SGPYGGRPRGPPR LDNVRGIDHSSLPACGSCCG
Sbjct: 68  SGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CmaCh15G006940 vs. ExPASy TrEMBL
Match: A0A6J1JQF6 (selenoprotein K OS=Cucurbita maxima OX=3661 GN=LOC111486892 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.5e-45
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 150 VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 209
           VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG
Sbjct: 8   VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 67

Query: 210 SGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG 244
           SGPYGGRPRGPPR LDNVRGIDHSSLPACGSCCG
Sbjct: 68  SGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CmaCh15G006940 vs. ExPASy TrEMBL
Match: A0A0A0KDW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040550 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.9e-45
Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 150 VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 209
           VVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG
Sbjct: 8   VVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 67

Query: 210 SGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG 244
           SGPYGGRPRGPPR LDNVRGIDHSSLPACGSCCG
Sbjct: 68  SGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CmaCh15G006940 vs. ExPASy TrEMBL
Match: A0A1S3BE45 (selenoprotein K OS=Cucumis melo OX=3656 GN=LOC103488629 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.9e-45
Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 150 VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 209
           VVKSQRSFWRLKTITDFFWAI+NIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG
Sbjct: 8   VVKSQRSFWRLKTITDFFWAIINIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 67

Query: 210 SGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG 244
           SGPYGGRPRGPPR LDNVRGIDHSSLPACGSCCG
Sbjct: 68  SGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CmaCh15G006940 vs. NCBI nr
Match: KAG6578980.1 (Selenoprotein K, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 341.3 bits (874), Expect = 7.0e-90
Identity = 181/244 (74.18%), Postives = 186/244 (76.23%), Query Frame = 0


Query: 1   MEAEISSRPKTYENGNSTSSFKNIAFHSLRHREGSGKFLPWRTLNEILFSNFCRRIGDFG 60
           MEAEISSRPKTYENGNSTSSFKNIAF S RHREG GKFLPWRTLNEILFSNFCRRIGDFG
Sbjct: 1   MEAEISSRPKTYENGNSTSSFKNIAFLSFRHREGPGKFLPWRTLNEILFSNFCRRIGDFG 60

Query: 61  PLVVFRNDPWMFWLSMYFILVLFRFPVVLCIHDSGFDFELSRLDPVFFSGRRDEGGYQVK 120
            LVVFRNDPWMFWLSMYFILVL RFPVVLC+                           + 
Sbjct: 61  SLVVFRNDPWMFWLSMYFILVLSRFPVVLCM---------------------------IL 120

Query: 121 FNVLNLVLGFLLLVVCLAGFSEWLFGTISVVKSQRSFWRLKTITDFFWAIVNIIGVFFTT 180
            ++L+LV                      VVKSQRSFWRLKTITDFFWAIVNIIGVFFTT
Sbjct: 121 VSILSLV---------------------GVVKSQRSFWRLKTITDFFWAIVNIIGVFFTT 180

Query: 181 LFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPY-GGRPRGPPRSLDNVRGIDHSSLPACG 240
           LFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPY GGRPRGPPR LDNVRGIDHSSLPACG
Sbjct: 181 LFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGGRPRGPPRGLDNVRGIDHSSLPACG 196

Query: 241 SCCG 244
           SCCG
Sbjct: 241 SCCG 196

[Close]

BLAST of CmaCh15G006940 vs. NCBI nr
Match: KAE8646613.1 (hypothetical protein Csa_005613 [Cucumis sativus])

HSP 1 Score: 194.5 bits (493), Expect = 1.1e-45
Identity = 93/100 (93.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 144 LFGTISVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGG 203
           L+  + VVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGG
Sbjct: 50  LWSFVGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGG 109

Query: 204 GPGGPGSGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG 244
           GPGGPGSGPYGGRPRGPPR LDNVRGIDHSSLPACGSCCG
Sbjct: 110 GPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 149

[Close]

BLAST of CmaCh15G006940 vs. NCBI nr
Match: XP_022993311.1 (selenoprotein K-like [Cucurbita maxima])

HSP 1 Score: 194.5 bits (493), Expect = 1.1e-45
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 150 VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 209
           VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG
Sbjct: 8   VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 67

Query: 210 SGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG 244
           SGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG
Sbjct: 68  SGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CmaCh15G006940 vs. NCBI nr
Match: XP_022964558.1 (selenoprotein K-like [Cucurbita moschata] >XP_022964567.1 selenoprotein K-like [Cucurbita moschata] >XP_022989819.1 selenoprotein K [Cucurbita maxima] >XP_023516420.1 selenoprotein K-like [Cucurbita pepo subsp. pepo] >KAG6602082.1 Selenoprotein K, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.0 bits (489), Expect = 3.1e-45
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 150 VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 209
           VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG
Sbjct: 8   VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 67

Query: 210 SGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG 244
           SGPYGGRPRGPPR LDNVRGIDHSSLPACGSCCG
Sbjct: 68  SGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CmaCh15G006940 vs. NCBI nr
Match: XP_031743925.1 (selenoprotein K isoform X2 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 4.0e-45
Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 150 VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 209
           VVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG
Sbjct: 8   VVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPG 67

Query: 210 SGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG 244
           SGPYGGRPRGPPR LDNVRGIDHSSLPACGSCCG
Sbjct: 68  SGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CmaCh15G006940 vs. TAIR 10
Match: AT4G08230.1 (glycine-rich protein )

HSP 1 Score: 114.8 bits (286), Expect = 9.9e-26
Identity = 65/106 (61.32%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 150 VVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKW-----DGGG 209
           VVK++R  WRL+TI DFF +I+N+I VFF T+FSMEKS+AYRKGS   KKW      GGG
Sbjct: 8   VVKAKRPIWRLRTIKDFFLSIINLIQVFFVTMFSMEKSDAYRKGSKPNKKWGGGMGGGGG 67

Query: 210 PGGPGSGPYGGRPRGPPR-SLDNVRGI------DHSSLPACGSCCG 244
            GG   G  GGR  GPPR  LDNVRG+      DH+SLPACGSCCG
Sbjct: 68  GGGGSGGGGGGRGGGPPRGGLDNVRGLNDIRGADHNSLPACGSCCG 113

[Close]

BLAST of CmaCh15G006940 vs. TAIR 10
Match: AT4G08230.2 (glycine-rich protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-12
Identity = 44/72 (61.11%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 184 MEKSEAYRKGSGSGKKW-----DGGGPGGPGSGPYGGRPRGPPR-SLDNVRGI------D 243
           MEKS+AYRKGS   KKW      GGG GG   G  GGR  GPPR  LDNVRG+      D
Sbjct: 1   MEKSDAYRKGSKPNKKWGGGMGGGGGGGGGSGGGGGGRGGGPPRGGLDNVRGLNDIRGAD 60

The following BLAST results are available for this feature:

BLAST of CmaCh15G006940 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh15G006940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JVZ4	5.1e-46	100.00	selenoprotein K-like OS=Cucurbita maxima OX=3661 GN=LOC111489356 PE=4 SV=1	[more]
A0A6J1HI52	1.5e-45	98.94	selenoprotein K-like OS=Cucurbita moschata OX=3662 GN=LOC111464545 PE=4 SV=1	[more]
A0A6J1JQF6	1.5e-45	98.94	selenoprotein K OS=Cucurbita maxima OX=3661 GN=LOC111486892 PE=4 SV=1	[more]
A0A0A0KDW6	1.9e-45	97.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040550 PE=4 SV=1	[more]
A0A1S3BE45	1.9e-45	97.87	selenoprotein K OS=Cucumis melo OX=3656 GN=LOC103488629 PE=4 SV=1	[more]

BLAST of CmaCh15G006940 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6578980.1	7.0e-90	74.18	Selenoprotein K, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAE8646613.1	1.1e-45	93.00	hypothetical protein Csa_005613 [Cucumis sativus]	[more]
XP_022993311.1	1.1e-45	100.00	selenoprotein K-like [Cucurbita maxima]	[more]
XP_022964558.1	3.1e-45	98.94	selenoprotein K-like [Cucurbita moschata] >XP_022964567.1 selenoprotein K-like [...	[more]
XP_031743925.1	4.0e-45	97.87	selenoprotein K isoform X2 [Cucumis sativus]	[more]

BLAST of CmaCh15G006940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08230.1	9.9e-26	61.32	glycine-rich protein	[more]
AT4G08230.2	1.3e-12	61.11	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024491	Selenoprotein SelK/SelG	PFAM	PF10961	SelK_SelG	coord: 149..218 e-value: 4.6E-18 score: 65.7
IPR024491	Selenoprotein SelK/SelG	PANTHER	PTHR16875	SELENOPROTEIN K	coord: 150..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G006940.1	CmaCh15G006940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0032469	endoplasmic reticulum calcium ion homeostasis
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane