CmaCh15G006770 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATAAATGGGCCGAACAAATAGCCCAACCGTCGGAATCGCTTTACGCTCAATTCGCTAGCGTTATCGGGCCACCGTTTACCGTGGGGACCGGTACCCGTCTTCATTTCTGTTTCTGTCGATTCTCGTCTTCACCAGAAGATACAGAACAGGCGATTGAGCTCCATAGCGAATTAATGGCGGGGAGGACGGTGTTGAAGGAGGAGAGCAGGGCAGGAAGCTTCTTCTCCGCGACATTAGTGCTTTGGACAGTCTCTCTTTGGTTCGAAATTCTGTTCGACAGGCGCTTCGAGCTGCTCTACCTCGTATTCGGAGCTCTGTTCTACCAATCCGCCAATTCGGCCATTCGATTTCTTATTTCTAAGGAACCTCTCGTAGTCAACACCGCTGTCTCTCTCCTTCACTCTATTATCACTTCTGCTTCAGGTTCTTTGCCTACTCTTTTACCCTTTGTTGCTTGTTTTCCCTTCTACTTCTCTGTGAGTGAATTCATACCTTCACTTGTTGTTTTTCGTCATACACGACTGCCTTCCTTATTTACTGTTTGATTCTTTGTTTGGTGGTTACTTCTTTGGCTTGCTTGAAGGTTTAGCAATGGAATAATAAACTTTATTTTCATTATAAGATAGACTGAGAGTTGATCGTGTTTTGTTATTGCAAGTTCTGTGTTGTAAGCTGTGTGAATTATTAGTTATTAATGGTGAATGAGAGTTTGCAAGTGTGCTGTTGTTTCTGGAAATCGGGATGTGGTTCAGTGCGTGTGCTACAGTGGGTTGTTTGAGACAATGAACCAAGCGCAAATGAATTTTTTTGGAGTCCTTTTCCAGCACCAAGAATATTTAGAGTTTGTTCTTTAATCCTGTAGCATTACTTTGGTCAAATTATAACACTAAACCCCAATTTTTAAGCTTAATTTCTTGAATTTTAATTGAGATTTAGAAATAGTTAATATTACCTTTTGTTATATCCAAAATCAATCCGAAATAACTTAAAATCAATTCAAATGATATGAAAATGGTGATTGAAAGTGTAAATCAAACATTAAATTGATTTTGAATGATTAAATACTTGATTTGGAGTGATTTTGAACATGACAAAAATGCACTAAGTTGTCTTCCTCACACGAATTCAGTTAAAATTAATTCAATCGACAAAAACTAAACAAAATAAATTTTAAATTTAGATACAGATCAGTCTAGAGGGCCATCCGTAGGACCTGTTAATCATAATGAAGATCTCTAACCTCAATACTCGTTTAAATCAAACAGGTCATTGTCATCTTGCTACACTACACAAAACAGTTCTAACCCAGACTATTATGTGATTAAAGGTTGTTTGTCAACCAAGAAAATGTCTAAAAACTCATGAATGATTAGAGAGATTCTCTCTTTGATTCATTAGCAAATTCTTTGAATTGTTGAAGGTTGAGGAAAGCCTAAAGGTAAACTAACTATTTAATTGCTAGGGGAAAGGCTGCTAGGTTGGCCTTGGTTGCCACTTTATTCCAACCCAAAGGGCTTTTATTTTCTGAATTTCAATAGTTAATCCTATTCTTTGGGCCATCTAGTTAAGTCATCTTTATTTAATTGCAGTGTTGTTTATTTTGGTGAATCGGTGGCTGAGTCATGGTTTGGACGGGATGTTTGAGCATTCACAGTTGTTTGGAGGAACATGGCCATGGGCTTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCATATGATCAGTGGGACATGCTGCAATACCGATTATACAGTGGCTGGATCCCTGCCATCTTGGTTCATCATCTGGTTCTCCTCATTTGCTTTACACTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCATTTGCGAGGTATGCATTAGTTTTTTCTTGCAAGATGTGCCTTATGAATATGCTGCTTTCTTTCTTTTTGTTTGTGGTTCTTTTTGGGTCTTTGCATCTCCGTTACCTTCATTGATATGGATCACGACGATGAAGGGCTTAATCACTTTGACATAGACACAAACATGAATTCCGAGTATTTTGCAAGCTTATCAGATTTAAGTCGTTTTTCAAAGAAACGTAATAGATAGATACTTTATCTAGTGTTGTTGGCTTGAACCGTCCTCATTCTATTGTGGCACCTTCTTTCTTTTTCTGACTTCTTTTTATAGCACTTTCTCCCCCTAACTTCTCTTTCCATTCACGTTTTCACGTTGATCTCCCGCTTCACACAGTTTCTATCACCTTACACTCTGTCTTAGTTAACCATTCTCTTACTAGCTCTCTTCATGTGTAGACTTCCCATGACTAGTCTCTCTTTGTATATTTCTTCGATTTTGAATCTATTTCTACACAATTTGTGAGATTCCACATCGATTGGAGAGGAGAACGAAGTATTTTTTTATAAGAGTGTGGAAACCTCTCCCTAGCATACGTGTTTTAAAACCTTGAGGGGAAGCTTGGAAGGGAAAGCCCAAAGAGGATAATATCTGCTAGCGATGGGCTTGGACTGTTACAAATGGTATCAGAGCCAGACATCGAGTAGTATGTCAGCGAGGAAGTTGGGCACCGAAAGGGGGTTGATTAGGGGTCCCACACATTGTTTGGAGAGAGGAACGAGTGTCAGAGAGGACGTTGGGCACCGAAGGGGGGTGGATTGTAAGATCCTACATCGGTTGGAGAGAGGAACGAAACATTATTTATAAGGGTGTAAAAACCTCTCCCTAGCAAACACGTTTTAAAACCTTGGGCTGTTACACAACTTCTCCTACTAAGGTCACTCTACACACCACCTCTCACTAATTTTCTTTATTAATTTATTGATATGGAGATGCACATACATACACCCATATGTAATGTTCAAATCAAAGAGCATGCTTTCTTTGGGGGTAAAAAACAGTCATCTTAGTTAGCAAGTGCAAGAGAGCGAGCTTGTAGTTTCTTTGCACGTTTGGAAGGACTCTAGAAGCCAATCATATCTATTCTTAGAATCAAATCAAGTTTTCATGTTAAATTTGACTTCCAGCTTTTGATCTGCAAAACTGAAACAAGAATCATTGTGATGTTTCAGCTGCATTCTATCTTCCTCCACGTAAGGCGATTGCGACGGATGGCTGGTGTTCGTGACGCCGAGAGCTTTATCGTGAAAGTCGAATGGACTCTGAACTGGCTAACGTTCATTTTCGCAAGGTTTGTACCTCACATTCTCATTACTGCTAAGCTCATCATGGATGCTTCCAAGTTTGATAAAGGCGTAGAGCTGCCGCTTGCACTGTTTGGGATGGCTGCAATGAACTTGCTGAATGTTTTTCTTGGCATTGATCTCTTCAACGCTGTAAAGAAAGAGAGTAATTATCAGAAAAATGATCATTTTCATCATGAATGAAGGCCAACATGGTGGAAATTGTATTTGTTCTTTGTATTATATTGTAAGAAAATGCTGAACAGAAGACGATTCAGGAGAAATTTATGTAACACTGAATACAAATTTGTGTAAAATCAGTTTAATATTTAGTTAAAGAAATTTAGTACTATTATT AAAATAAATGGGCCGAACAAATAGCCCAACCGTCGGAATCGCTTTACGCTCAATTCGCTAGCGTTATCGGGCCACCGTTTACCGTGGGGACCGGTACCCGTCTTCATTTCTGTTTCTGTCGATTCTCGTCTTCACCAGAAGATACAGAACAGGCGATTGAGCTCCATAGCGAATTAATGGCGGGGAGGACGGTGTTGAAGGAGGAGAGCAGGGCAGGAAGCTTCTTCTCCGCGACATTAGTGCTTTGGACAGTCTCTCTTTGGTTCGAAATTCTGTTCGACAGGCGCTTCGAGCTGCTCTACCTCGTATTCGGAGCTCTGTTCTACCAATCCGCCAATTCGGCCATTCGATTTCTTATTTCTAAGGAACCTCTCGTAGTCAACACCGCTGTCTCTCTCCTTCACTCTATTATCACTTCTGCTTCAGTGTTGTTTATTTTGGTGAATCGGTGGCTGAGTCATGGTTTGGACGGGATGTTTGAGCATTCACAGTTGTTTGGAGGAACATGGCCATGGGCTTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCATATGATCAGTGGGACATGCTGCAATACCGATTATACAGTGGCTGGATCCCTGCCATCTTGGTTCATCATCTGGTTCTCCTCATTTGCTTTACACTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCATTTGCGAGCTGCATTCTATCTTCCTCCACGTAAGGCGATTGCGACGGATGGCTGGTGTTCGTGACGCCGAGAGCTTTATCGTGAAAGTCGAATGGACTCTGAACTGGCTAACGTTCATTTTCGCAAGGTTTGTACCTCACATTCTCATTACTGCTAAGCTCATCATGGATGCTTCCAAGTTTGATAAAGGCGTAGAGCTGCCGCTTGCACTGTTTGGGATGGCTGCAATGAACTTGCTGAATGTTTTTCTTGGCATTGATCTCTTCAACGCTGTAAAGAAAGAGAGTAATTATCAGAAAAATGATCATTTTCATCATGAATGAAGGCCAACATGGTGGAAATTGTATTTGTTCTTTGTATTATATTGTAAGAAAATGCTGAACAGAAGACGATTCAGGAGAAATTTATGTAACACTGAATACAAATTTGTGTAAAATCAGTTTAATATTTAGTTAAAGAAATTTAGTACTATTATT ATGGCGGGGAGGACGGTGTTGAAGGAGGAGAGCAGGGCAGGAAGCTTCTTCTCCGCGACATTAGTGCTTTGGACAGTCTCTCTTTGGTTCGAAATTCTGTTCGACAGGCGCTTCGAGCTGCTCTACCTCGTATTCGGAGCTCTGTTCTACCAATCCGCCAATTCGGCCATTCGATTTCTTATTTCTAAGGAACCTCTCGTAGTCAACACCGCTGTCTCTCTCCTTCACTCTATTATCACTTCTGCTTCAGTGTTGTTTATTTTGGTGAATCGGTGGCTGAGTCATGGTTTGGACGGGATGTTTGAGCATTCACAGTTGTTTGGAGGAACATGGCCATGGGCTTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCATATGATCAGTGGGACATGCTGCAATACCGATTATACAGTGGCTGGATCCCTGCCATCTTGGTTCATCATCTGGTTCTCCTCATTTGCTTTACACTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCATTTGCGAGCTGCATTCTATCTTCCTCCACGTAAGGCGATTGCGACGGATGGCTGGTGTTCGTGACGCCGAGAGCTTTATCGTGAAAGTCGAATGGACTCTGAACTGGCTAACGTTCATTTTCGCAAGGTTTGTACCTCACATTCTCATTACTGCTAAGCTCATCATGGATGCTTCCAAGTTTGATAAAGGCGTAGAGCTGCCGCTTGCACTGTTTGGGATGGCTGCAATGAACTTGCTGAATGTTTTTCTTGGCATTGATCTCTTCAACGCTGTAAAGAAAGAGAGTAATTATCAGAAAAATGATCATTTTCATCATGAATGA MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFLISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVELPLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE Homology
BLAST of CmaCh15G006770 vs. ExPASy Swiss-Prot
Match: A8WGS4 (TLC domain-containing protein 2 OS=Danio rerio OX=7955 GN=tlcd2 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.3e-07 Identity = 50/191 (26.18%), Postives = 98/191 (51.31%), Query Frame = 0
BLAST of CmaCh15G006770 vs. ExPASy Swiss-Prot
Match: Q8VC26 (TLC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Tlcd2 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.7e-05 Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = 0
BLAST of CmaCh15G006770 vs. ExPASy Swiss-Prot
Match: A6NGC4 (TLC domain-containing protein 2 OS=Homo sapiens OX=9606 GN=TLCD2 PE=3 SV=3) HSP 1 Score: 48.1 bits (113), Expect = 1.8e-04 Identity = 54/197 (27.41%), Postives = 91/197 (46.19%), Query Frame = 0
BLAST of CmaCh15G006770 vs. ExPASy TrEMBL
Match: A0A6J1K0R9 (TLC domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111489133 PE=4 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 1.5e-153 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
BLAST of CmaCh15G006770 vs. ExPASy TrEMBL
Match: A0A6J1FID3 (TLC domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111445599 PE=4 SV=1) HSP 1 Score: 542.0 bits (1395), Expect = 1.5e-150 Identity = 274/280 (97.86%), Postives = 276/280 (98.57%), Query Frame = 0
BLAST of CmaCh15G006770 vs. ExPASy TrEMBL
Match: A0A0A0KH54 (TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G385110 PE=4 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 3.1e-132 Identity = 243/282 (86.17%), Postives = 263/282 (93.26%), Query Frame = 0
BLAST of CmaCh15G006770 vs. ExPASy TrEMBL
Match: A0A1S3CRX5 (TLC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103504058 PE=4 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 5.4e-132 Identity = 240/282 (85.11%), Postives = 262/282 (92.91%), Query Frame = 0
BLAST of CmaCh15G006770 vs. ExPASy TrEMBL
Match: A0A6J1CKF5 (TLC domain-containing protein 2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011955 PE=4 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 1.7e-125 Identity = 235/280 (83.93%), Postives = 252/280 (90.00%), Query Frame = 0
BLAST of CmaCh15G006770 vs. NCBI nr
Match: XP_022992953.1 (TLC domain-containing protein 2 [Cucurbita maxima]) HSP 1 Score: 552.0 bits (1421), Expect = 3.0e-153 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
BLAST of CmaCh15G006770 vs. NCBI nr
Match: XP_022939854.1 (TLC domain-containing protein 2 [Cucurbita moschata] >KAG6578966.1 TLC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016488.1 TLC domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 542.0 bits (1395), Expect = 3.1e-150 Identity = 274/280 (97.86%), Postives = 276/280 (98.57%), Query Frame = 0
BLAST of CmaCh15G006770 vs. NCBI nr
Match: XP_023550889.1 (TLC domain-containing protein 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 541.6 bits (1394), Expect = 4.1e-150 Identity = 274/280 (97.86%), Postives = 278/280 (99.29%), Query Frame = 0
BLAST of CmaCh15G006770 vs. NCBI nr
Match: XP_038884583.1 (TLC domain-containing protein 2 [Benincasa hispida]) HSP 1 Score: 492.7 bits (1267), Expect = 2.2e-135 Identity = 247/280 (88.21%), Postives = 265/280 (94.64%), Query Frame = 0
BLAST of CmaCh15G006770 vs. NCBI nr
Match: XP_004150440.1 (TLC domain-containing protein 2 [Cucumis sativus] >KGN47727.1 hypothetical protein Csa_018230 [Cucumis sativus]) HSP 1 Score: 481.1 bits (1237), Expect = 6.5e-132 Identity = 243/282 (86.17%), Postives = 263/282 (93.26%), Query Frame = 0
BLAST of CmaCh15G006770 vs. TAIR 10
Match: AT1G21790.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein ) HSP 1 Score: 373.6 bits (958), Expect = 1.4e-103 Identity = 185/266 (69.55%), Postives = 226/266 (84.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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