CmaCh15G006770 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh15G006770
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionTLC domain-containing protein
LocationCma_Chr15: 3239258 .. 3242796 (+)
RNA-Seq ExpressionCmaCh15G006770
SyntenyCmaCh15G006770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATAAATGGGCCGAACAAATAGCCCAACCGTCGGAATCGCTTTACGCTCAATTCGCTAGCGTTATCGGGCCACCGTTTACCGTGGGGACCGGTACCCGTCTTCATTTCTGTTTCTGTCGATTCTCGTCTTCACCAGAAGATACAGAACAGGCGATTGAGCTCCATAGCGAATTAATGGCGGGGAGGACGGTGTTGAAGGAGGAGAGCAGGGCAGGAAGCTTCTTCTCCGCGACATTAGTGCTTTGGACAGTCTCTCTTTGGTTCGAAATTCTGTTCGACAGGCGCTTCGAGCTGCTCTACCTCGTATTCGGAGCTCTGTTCTACCAATCCGCCAATTCGGCCATTCGATTTCTTATTTCTAAGGAACCTCTCGTAGTCAACACCGCTGTCTCTCTCCTTCACTCTATTATCACTTCTGCTTCAGGTTCTTTGCCTACTCTTTTACCCTTTGTTGCTTGTTTTCCCTTCTACTTCTCTGTGAGTGAATTCATACCTTCACTTGTTGTTTTTCGTCATACACGACTGCCTTCCTTATTTACTGTTTGATTCTTTGTTTGGTGGTTACTTCTTTGGCTTGCTTGAAGGTTTAGCAATGGAATAATAAACTTTATTTTCATTATAAGATAGACTGAGAGTTGATCGTGTTTTGTTATTGCAAGTTCTGTGTTGTAAGCTGTGTGAATTATTAGTTATTAATGGTGAATGAGAGTTTGCAAGTGTGCTGTTGTTTCTGGAAATCGGGATGTGGTTCAGTGCGTGTGCTACAGTGGGTTGTTTGAGACAATGAACCAAGCGCAAATGAATTTTTTTGGAGTCCTTTTCCAGCACCAAGAATATTTAGAGTTTGTTCTTTAATCCTGTAGCATTACTTTGGTCAAATTATAACACTAAACCCCAATTTTTAAGCTTAATTTCTTGAATTTTAATTGAGATTTAGAAATAGTTAATATTACCTTTTGTTATATCCAAAATCAATCCGAAATAACTTAAAATCAATTCAAATGATATGAAAATGGTGATTGAAAGTGTAAATCAAACATTAAATTGATTTTGAATGATTAAATACTTGATTTGGAGTGATTTTGAACATGACAAAAATGCACTAAGTTGTCTTCCTCACACGAATTCAGTTAAAATTAATTCAATCGACAAAAACTAAACAAAATAAATTTTAAATTTAGATACAGATCAGTCTAGAGGGCCATCCGTAGGACCTGTTAATCATAATGAAGATCTCTAACCTCAATACTCGTTTAAATCAAACAGGTCATTGTCATCTTGCTACACTACACAAAACAGTTCTAACCCAGACTATTATGTGATTAAAGGTTGTTTGTCAACCAAGAAAATGTCTAAAAACTCATGAATGATTAGAGAGATTCTCTCTTTGATTCATTAGCAAATTCTTTGAATTGTTGAAGGTTGAGGAAAGCCTAAAGGTAAACTAACTATTTAATTGCTAGGGGAAAGGCTGCTAGGTTGGCCTTGGTTGCCACTTTATTCCAACCCAAAGGGCTTTTATTTTCTGAATTTCAATAGTTAATCCTATTCTTTGGGCCATCTAGTTAAGTCATCTTTATTTAATTGCAGTGTTGTTTATTTTGGTGAATCGGTGGCTGAGTCATGGTTTGGACGGGATGTTTGAGCATTCACAGTTGTTTGGAGGAACATGGCCATGGGCTTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCATATGATCAGTGGGACATGCTGCAATACCGATTATACAGTGGCTGGATCCCTGCCATCTTGGTTCATCATCTGGTTCTCCTCATTTGCTTTACACTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCATTTGCGAGGTATGCATTAGTTTTTTCTTGCAAGATGTGCCTTATGAATATGCTGCTTTCTTTCTTTTTGTTTGTGGTTCTTTTTGGGTCTTTGCATCTCCGTTACCTTCATTGATATGGATCACGACGATGAAGGGCTTAATCACTTTGACATAGACACAAACATGAATTCCGAGTATTTTGCAAGCTTATCAGATTTAAGTCGTTTTTCAAAGAAACGTAATAGATAGATACTTTATCTAGTGTTGTTGGCTTGAACCGTCCTCATTCTATTGTGGCACCTTCTTTCTTTTTCTGACTTCTTTTTATAGCACTTTCTCCCCCTAACTTCTCTTTCCATTCACGTTTTCACGTTGATCTCCCGCTTCACACAGTTTCTATCACCTTACACTCTGTCTTAGTTAACCATTCTCTTACTAGCTCTCTTCATGTGTAGACTTCCCATGACTAGTCTCTCTTTGTATATTTCTTCGATTTTGAATCTATTTCTACACAATTTGTGAGATTCCACATCGATTGGAGAGGAGAACGAAGTATTTTTTTATAAGAGTGTGGAAACCTCTCCCTAGCATACGTGTTTTAAAACCTTGAGGGGAAGCTTGGAAGGGAAAGCCCAAAGAGGATAATATCTGCTAGCGATGGGCTTGGACTGTTACAAATGGTATCAGAGCCAGACATCGAGTAGTATGTCAGCGAGGAAGTTGGGCACCGAAAGGGGGTTGATTAGGGGTCCCACACATTGTTTGGAGAGAGGAACGAGTGTCAGAGAGGACGTTGGGCACCGAAGGGGGGTGGATTGTAAGATCCTACATCGGTTGGAGAGAGGAACGAAACATTATTTATAAGGGTGTAAAAACCTCTCCCTAGCAAACACGTTTTAAAACCTTGGGCTGTTACACAACTTCTCCTACTAAGGTCACTCTACACACCACCTCTCACTAATTTTCTTTATTAATTTATTGATATGGAGATGCACATACATACACCCATATGTAATGTTCAAATCAAAGAGCATGCTTTCTTTGGGGGTAAAAAACAGTCATCTTAGTTAGCAAGTGCAAGAGAGCGAGCTTGTAGTTTCTTTGCACGTTTGGAAGGACTCTAGAAGCCAATCATATCTATTCTTAGAATCAAATCAAGTTTTCATGTTAAATTTGACTTCCAGCTTTTGATCTGCAAAACTGAAACAAGAATCATTGTGATGTTTCAGCTGCATTCTATCTTCCTCCACGTAAGGCGATTGCGACGGATGGCTGGTGTTCGTGACGCCGAGAGCTTTATCGTGAAAGTCGAATGGACTCTGAACTGGCTAACGTTCATTTTCGCAAGGTTTGTACCTCACATTCTCATTACTGCTAAGCTCATCATGGATGCTTCCAAGTTTGATAAAGGCGTAGAGCTGCCGCTTGCACTGTTTGGGATGGCTGCAATGAACTTGCTGAATGTTTTTCTTGGCATTGATCTCTTCAACGCTGTAAAGAAAGAGAGTAATTATCAGAAAAATGATCATTTTCATCATGAATGAAGGCCAACATGGTGGAAATTGTATTTGTTCTTTGTATTATATTGTAAGAAAATGCTGAACAGAAGACGATTCAGGAGAAATTTATGTAACACTGAATACAAATTTGTGTAAAATCAGTTTAATATTTAGTTAAAGAAATTTAGTACTATTATT

mRNA sequence

AAAATAAATGGGCCGAACAAATAGCCCAACCGTCGGAATCGCTTTACGCTCAATTCGCTAGCGTTATCGGGCCACCGTTTACCGTGGGGACCGGTACCCGTCTTCATTTCTGTTTCTGTCGATTCTCGTCTTCACCAGAAGATACAGAACAGGCGATTGAGCTCCATAGCGAATTAATGGCGGGGAGGACGGTGTTGAAGGAGGAGAGCAGGGCAGGAAGCTTCTTCTCCGCGACATTAGTGCTTTGGACAGTCTCTCTTTGGTTCGAAATTCTGTTCGACAGGCGCTTCGAGCTGCTCTACCTCGTATTCGGAGCTCTGTTCTACCAATCCGCCAATTCGGCCATTCGATTTCTTATTTCTAAGGAACCTCTCGTAGTCAACACCGCTGTCTCTCTCCTTCACTCTATTATCACTTCTGCTTCAGTGTTGTTTATTTTGGTGAATCGGTGGCTGAGTCATGGTTTGGACGGGATGTTTGAGCATTCACAGTTGTTTGGAGGAACATGGCCATGGGCTTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCATATGATCAGTGGGACATGCTGCAATACCGATTATACAGTGGCTGGATCCCTGCCATCTTGGTTCATCATCTGGTTCTCCTCATTTGCTTTACACTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCATTTGCGAGCTGCATTCTATCTTCCTCCACGTAAGGCGATTGCGACGGATGGCTGGTGTTCGTGACGCCGAGAGCTTTATCGTGAAAGTCGAATGGACTCTGAACTGGCTAACGTTCATTTTCGCAAGGTTTGTACCTCACATTCTCATTACTGCTAAGCTCATCATGGATGCTTCCAAGTTTGATAAAGGCGTAGAGCTGCCGCTTGCACTGTTTGGGATGGCTGCAATGAACTTGCTGAATGTTTTTCTTGGCATTGATCTCTTCAACGCTGTAAAGAAAGAGAGTAATTATCAGAAAAATGATCATTTTCATCATGAATGAAGGCCAACATGGTGGAAATTGTATTTGTTCTTTGTATTATATTGTAAGAAAATGCTGAACAGAAGACGATTCAGGAGAAATTTATGTAACACTGAATACAAATTTGTGTAAAATCAGTTTAATATTTAGTTAAAGAAATTTAGTACTATTATT

Coding sequence (CDS)

ATGGCGGGGAGGACGGTGTTGAAGGAGGAGAGCAGGGCAGGAAGCTTCTTCTCCGCGACATTAGTGCTTTGGACAGTCTCTCTTTGGTTCGAAATTCTGTTCGACAGGCGCTTCGAGCTGCTCTACCTCGTATTCGGAGCTCTGTTCTACCAATCCGCCAATTCGGCCATTCGATTTCTTATTTCTAAGGAACCTCTCGTAGTCAACACCGCTGTCTCTCTCCTTCACTCTATTATCACTTCTGCTTCAGTGTTGTTTATTTTGGTGAATCGGTGGCTGAGTCATGGTTTGGACGGGATGTTTGAGCATTCACAGTTGTTTGGAGGAACATGGCCATGGGCTTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCATATGATCAGTGGGACATGCTGCAATACCGATTATACAGTGGCTGGATCCCTGCCATCTTGGTTCATCATCTGGTTCTCCTCATTTGCTTTACACTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCATTTGCGAGCTGCATTCTATCTTCCTCCACGTAAGGCGATTGCGACGGATGGCTGGTGTTCGTGACGCCGAGAGCTTTATCGTGAAAGTCGAATGGACTCTGAACTGGCTAACGTTCATTTTCGCAAGGTTTGTACCTCACATTCTCATTACTGCTAAGCTCATCATGGATGCTTCCAAGTTTGATAAAGGCGTAGAGCTGCCGCTTGCACTGTTTGGGATGGCTGCAATGAACTTGCTGAATGTTTTTCTTGGCATTGATCTCTTCAACGCTGTAAAGAAAGAGAGTAATTATCAGAAAAATGATCATTTTCATCATGAATGA

Protein sequence

MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFLISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVELPLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE
Homology
BLAST of CmaCh15G006770 vs. ExPASy Swiss-Prot
Match: A8WGS4 (TLC domain-containing protein 2 OS=Danio rerio OX=7955 GN=tlcd2 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.3e-07
Identity = 50/191 (26.18%), Postives = 98/191 (51.31%), Query Frame = 0

Query: 69  NTAVSLLHSIITSA-SVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCFSCGYFAY 128
           N + S +HS+IT   SVL   ++  ++   + + E   +F      ++A +  S GYF Y
Sbjct: 42  NISTSFVHSLITGVWSVLCFCMHPQMA---EDLIETHSVF------SHALVSVSIGYFIY 101

Query: 129 DQWDM-LQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSIFLHVRR 188
           D  DM +  ++   W   +L HH+V++ CF +++     + + ++ L+ E++S+FLH+R+
Sbjct: 102 DFLDMVINQKIIHSW--ELLFHHVVVITCFGISVLTCRYVGFAVVALLVEINSVFLHLRQ 161

Query: 189 LRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVELPLALFG 248
           + RMA +  A+S   +V   +N  T++  R      +T  L+++           +   G
Sbjct: 162 VLRMANL--AKSTFYRVNSMINLGTYVVFRINTLAWMTRWLVLNRDLIPL-FSYTIGSVG 218

Query: 249 MAAMNLLNVFL 258
           +A M  +N+ L
Sbjct: 222 LAIMTAMNIVL 218

BLAST of CmaCh15G006770 vs. ExPASy Swiss-Prot
Match: Q8VC26 (TLC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Tlcd2 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.7e-05
Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = 0

Query: 69  NTAVSLLHSIITSASVLFILVNRWLSHGL--DGMFEHSQLFGGTWPWAYAALCFSCGYFA 128
           N  VSL+HS+++       LV  W    +  D + +H        PWA   +  S GYFA
Sbjct: 40  NIFVSLIHSLLSGVGA---LVGLWQFPQMVTDPINDHP-------PWARVLVAVSVGYFA 99

Query: 129 YDQWDML-QYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSIFLHVR 188
            D  DML    L   W   +L HHL ++ C + A+     + + +++L+ EL+SI LH+R
Sbjct: 100 ADGVDMLWNQTLAQAW--DLLCHHLAVVSCLSTAVVSGHYVGFSMVSLLLELNSICLHLR 159

Query: 189 RLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVP 220
           +L  ++    A S   +V    +  T +  R +P
Sbjct: 160 KLLLLS--HKAPSLAFRVSSWASLATLVLFRLLP 179

BLAST of CmaCh15G006770 vs. ExPASy Swiss-Prot
Match: A6NGC4 (TLC domain-containing protein 2 OS=Homo sapiens OX=9606 GN=TLCD2 PE=3 SV=3)

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-04
Identity = 54/197 (27.41%), Postives = 91/197 (46.19%), Query Frame = 0

Query: 69  NTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCFSCGYFAYD 128
           N  VSL HS+++    L  L + +     D +  H +       WA   +  S GYF  D
Sbjct: 41  NLCVSLAHSLLSGTGALLGL-SLYPQMAADPIHGHPR-------WALVLVAVSVGYFLAD 100

Query: 129 QWDML-QYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSIFLHVRRL 188
             D+L    L   W   +L HHLV++ C + A+     + + +++L+ EL+S  LH+R+L
Sbjct: 101 GADLLWNQTLGKTW--DLLCHHLVVVSCLSTAVLSGHYVGFSMVSLLLELNSACLHLRKL 160

Query: 189 RRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVELPLAL--- 248
             ++  R A S    V    +  T    R VP   ++  L      F +  ++PLAL   
Sbjct: 161 LLLS--RQAPSLAFSVTSWASLATLALFRLVPLGWMSLWL------FRQHHQVPLALVTL 219

Query: 249 --FGMAAMNLLNVFLGI 260
              G+  + ++++ LGI
Sbjct: 221 GGIGLVTVGIMSIILGI 219

BLAST of CmaCh15G006770 vs. ExPASy TrEMBL
Match: A0A6J1K0R9 (TLC domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111489133 PE=4 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.5e-153
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0

Query: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60
           MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL
Sbjct: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCF 120
           ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCF
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCF 120

Query: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180
           SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI
Sbjct: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240
           FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL
Sbjct: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240

Query: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 281
           PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE
Sbjct: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 280

BLAST of CmaCh15G006770 vs. ExPASy TrEMBL
Match: A0A6J1FID3 (TLC domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111445599 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.5e-150
Identity = 274/280 (97.86%), Postives = 276/280 (98.57%), Query Frame = 0

Query: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60
           MAGRTVLKE+SRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL
Sbjct: 1   MAGRTVLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCF 120
           ISKEPLVVNTAVSLLHSIITSASVLF+L NRWLSHG DGMFEHSQLFGGTWPWAYAALCF
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLANRWLSHGSDGMFEHSQLFGGTWPWAYAALCF 120

Query: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180
           SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI
Sbjct: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240
           FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTF FARFVPHILITAKLIMDASKFDKGVEL
Sbjct: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFTFARFVPHILITAKLIMDASKFDKGVEL 240

Query: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 281
           PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDH HHE
Sbjct: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHLHHE 280

BLAST of CmaCh15G006770 vs. ExPASy TrEMBL
Match: A0A0A0KH54 (TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G385110 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 3.1e-132
Identity = 243/282 (86.17%), Postives = 263/282 (93.26%), Query Frame = 0

Query: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60
           MAGRT+LKE+SRA SFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L
Sbjct: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60

Query: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSH--GLDGMFEHSQLFGGTWPWAYAAL 120
           +SK+PL+VNT+VSLLHSIITSASVLF+LVNRWLS+  G +GMFEHSQLFGGTWPWA+AAL
Sbjct: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120

Query: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELH 180
           CFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICE+H
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMH 180

Query: 181 SIFLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGV 240
           SIFLHVRRLRRMAGVRDA+S IVKVEW LNWLTF+FARFVPHILIT KLI+DASKFDKGV
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGV 240

Query: 241 ELPLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 281
           ELPLAL GMA MNLLN  LGIDL NAVKKESNY+K D  HHE
Sbjct: 241 ELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE 282

BLAST of CmaCh15G006770 vs. ExPASy TrEMBL
Match: A0A1S3CRX5 (TLC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103504058 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 5.4e-132
Identity = 240/282 (85.11%), Postives = 262/282 (92.91%), Query Frame = 0

Query: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60
           MAGRT+LKE+SRAGSFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L
Sbjct: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60

Query: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSH--GLDGMFEHSQLFGGTWPWAYAAL 120
           +SK+PL+VNT+VSLLHSI+TSASVLF+LVNRWLS+    +GMFEHSQLFGGTWPWAYAAL
Sbjct: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELH 180
           CFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTL+CE+H
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180

Query: 181 SIFLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGV 240
           SIFLHVRRLRRMAGVRDA+S IVKVEW LNWLTF+FARFVPHILIT KLI+DA KFDKGV
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240

Query: 241 ELPLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 281
           ELPLAL GM  MNLLN  LGIDL NAV+KESNY+K D  HHE
Sbjct: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 282

BLAST of CmaCh15G006770 vs. ExPASy TrEMBL
Match: A0A6J1CKF5 (TLC domain-containing protein 2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011955 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.7e-125
Identity = 235/280 (83.93%), Postives = 252/280 (90.00%), Query Frame = 0

Query: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60
           MAGR V KE+SRAGSFFSATLVLW VS+WFEILF RR ELLY+VFGALFYQSAN  +R L
Sbjct: 1   MAGRRVPKEKSRAGSFFSATLVLWIVSIWFEILFYRRSELLYVVFGALFYQSANWTVRAL 60

Query: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCF 120
           +SK+PL VNT+VSLLHS ITSASVLFILV++WLS+G  GMFEHSQL GGTW  AYAALCF
Sbjct: 61  VSKDPLFVNTSVSLLHSTITSASVLFILVSQWLSYGSHGMFEHSQLVGGTWSGAYAALCF 120

Query: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180
           SCGYFAYDQWDML Y+LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI
Sbjct: 121 SCGYFAYDQWDMLLYQLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240
           FLHVRRLRRMAGVRDA+S +VKVEW LNWLTF+FAR VPHILITAKL++DASKFD+GVEL
Sbjct: 181 FLHVRRLRRMAGVRDAKSIVVKVEWILNWLTFVFARVVPHILITAKLVVDASKFDRGVEL 240

Query: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 281
           PLAL GMA MNLLN FLGIDL NAVKKES YQK DH   E
Sbjct: 241 PLALSGMAGMNLLNAFLGIDLINAVKKESKYQKRDHPRRE 280

BLAST of CmaCh15G006770 vs. NCBI nr
Match: XP_022992953.1 (TLC domain-containing protein 2 [Cucurbita maxima])

HSP 1 Score: 552.0 bits (1421), Expect = 3.0e-153
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0

Query: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60
           MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL
Sbjct: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCF 120
           ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCF
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCF 120

Query: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180
           SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI
Sbjct: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240
           FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL
Sbjct: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240

Query: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 281
           PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE
Sbjct: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 280

BLAST of CmaCh15G006770 vs. NCBI nr
Match: XP_022939854.1 (TLC domain-containing protein 2 [Cucurbita moschata] >KAG6578966.1 TLC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016488.1 TLC domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 542.0 bits (1395), Expect = 3.1e-150
Identity = 274/280 (97.86%), Postives = 276/280 (98.57%), Query Frame = 0

Query: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60
           MAGRTVLKE+SRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL
Sbjct: 1   MAGRTVLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCF 120
           ISKEPLVVNTAVSLLHSIITSASVLF+L NRWLSHG DGMFEHSQLFGGTWPWAYAALCF
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLANRWLSHGSDGMFEHSQLFGGTWPWAYAALCF 120

Query: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180
           SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI
Sbjct: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240
           FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTF FARFVPHILITAKLIMDASKFDKGVEL
Sbjct: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFTFARFVPHILITAKLIMDASKFDKGVEL 240

Query: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 281
           PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDH HHE
Sbjct: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHLHHE 280

BLAST of CmaCh15G006770 vs. NCBI nr
Match: XP_023550889.1 (TLC domain-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 541.6 bits (1394), Expect = 4.1e-150
Identity = 274/280 (97.86%), Postives = 278/280 (99.29%), Query Frame = 0

Query: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60
           MAGRT+LKE+SRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL
Sbjct: 1   MAGRTMLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCF 120
           ISKEPLVVNTAVSLLHSIITSASVLF+LVNRWLSHG DGMFEHSQLFGGTWPWAYAALCF
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLVNRWLSHGSDGMFEHSQLFGGTWPWAYAALCF 120

Query: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180
           SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI
Sbjct: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240
           FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL
Sbjct: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240

Query: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 281
           PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDH H+E
Sbjct: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHLHNE 280

BLAST of CmaCh15G006770 vs. NCBI nr
Match: XP_038884583.1 (TLC domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 492.7 bits (1267), Expect = 2.2e-135
Identity = 247/280 (88.21%), Postives = 265/280 (94.64%), Query Frame = 0

Query: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60
           MAGRTVLKE+ RAGSFFSATLVLW+VSL FEILFDRRFELLY+VFGALFYQSANSAIRFL
Sbjct: 1   MAGRTVLKEKRRAGSFFSATLVLWSVSLCFEILFDRRFELLYVVFGALFYQSANSAIRFL 60

Query: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCF 120
           +SK+PL+VNT+VSLLHS ITSASVLF+LVNRWLS+G +G+FEHSQLFGGTWPWAYAALCF
Sbjct: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSYGSEGIFEHSQLFGGTWPWAYAALCF 120

Query: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180
           SCGYFAYDQWDMLQY LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICE+HSI
Sbjct: 121 SCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMHSI 180

Query: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240
           FLHVRRLRRMAGVRDA+S IVKVEW LNWLTF+FARFVPHILITAKLIMDASKFDKG+EL
Sbjct: 181 FLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGIEL 240

Query: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 281
           PLAL GMA MNLLN  LG+DL +AV+KES YQK DH HHE
Sbjct: 241 PLALSGMAGMNLLNALLGMDLLSAVRKESYYQKTDHSHHE 280

BLAST of CmaCh15G006770 vs. NCBI nr
Match: XP_004150440.1 (TLC domain-containing protein 2 [Cucumis sativus] >KGN47727.1 hypothetical protein Csa_018230 [Cucumis sativus])

HSP 1 Score: 481.1 bits (1237), Expect = 6.5e-132
Identity = 243/282 (86.17%), Postives = 263/282 (93.26%), Query Frame = 0

Query: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60
           MAGRT+LKE+SRA SFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L
Sbjct: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60

Query: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSH--GLDGMFEHSQLFGGTWPWAYAAL 120
           +SK+PL+VNT+VSLLHSIITSASVLF+LVNRWLS+  G +GMFEHSQLFGGTWPWA+AAL
Sbjct: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120

Query: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELH 180
           CFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICE+H
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMH 180

Query: 181 SIFLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGV 240
           SIFLHVRRLRRMAGVRDA+S IVKVEW LNWLTF+FARFVPHILIT KLI+DASKFDKGV
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGV 240

Query: 241 ELPLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 281
           ELPLAL GMA MNLLN  LGIDL NAVKKESNY+K D  HHE
Sbjct: 241 ELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE 282

BLAST of CmaCh15G006770 vs. TAIR 10
Match: AT1G21790.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 373.6 bits (958), Expect = 1.4e-103
Identity = 185/266 (69.55%), Postives = 226/266 (84.96%), Query Frame = 0

Query: 9   EESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFLISKEPLVV 68
           +++ AG FF ATL+LW VS+ FEI F+ R ELL+++ G  F+Q  N  +R  IS++P+ V
Sbjct: 12  KKNGAGQFFLATLLLWLVSVVFEIAFNLRTELLWVICGGCFFQLMNWVVRSWISRDPIFV 71

Query: 69  NTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCFSCGYFAYD 128
           NT+VSLLHSIITSASV+FIL+N+ L+ GLD MF+HS+L GGTW WAY ALCFSCGYFAYD
Sbjct: 72  NTSVSLLHSIITSASVVFILLNQCLAKGLDEMFDHSELVGGTWKWAYPALCFSCGYFAYD 131

Query: 129 QWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSIFLHVRRLR 188
           QWDMLQYRLYSG IP+ILVHHLVLL+CFTLALYRNVTINYLILTLICE+HSIFLHVR+LR
Sbjct: 132 QWDMLQYRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLILTLICEMHSIFLHVRKLR 191

Query: 189 RMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVELPLALFGMA 248
           RMAG+RD+ + +VK+EW LNW  F+FAR +PHILIT KLI DA KF KGVELPLAL GMA
Sbjct: 192 RMAGIRDSNTALVKLEWVLNWTAFVFARCIPHILITIKLIKDAHKFGKGVELPLALSGMA 251

Query: 249 AMNLLNVFLGIDLFNAVKKESNYQKN 275
            MN+LNV LG+DLF+A ++E ++++N
Sbjct: 252 GMNILNVGLGLDLFHAFRRERSHRRN 277

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A8WGS42.3e-0726.18TLC domain-containing protein 2 OS=Danio rerio OX=7955 GN=tlcd2 PE=2 SV=1[more]
Q8VC263.7e-0529.87TLC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Tlcd2 PE=2 SV=1[more]
A6NGC41.8e-0427.41TLC domain-containing protein 2 OS=Homo sapiens OX=9606 GN=TLCD2 PE=3 SV=3[more]
Match NameE-valueIdentityDescription
A0A6J1K0R91.5e-153100.00TLC domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111489133 PE=4... [more]
A0A6J1FID31.5e-15097.86TLC domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111445599 PE... [more]
A0A0A0KH543.1e-13286.17TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G385110 PE=4 SV... [more]
A0A1S3CRX55.4e-13285.11TLC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103504058 PE=4 SV=... [more]
A0A6J1CKF51.7e-12583.93TLC domain-containing protein 2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC... [more]
Match NameE-valueIdentityDescription
XP_022992953.13.0e-153100.00TLC domain-containing protein 2 [Cucurbita maxima][more]
XP_022939854.13.1e-15097.86TLC domain-containing protein 2 [Cucurbita moschata] >KAG6578966.1 TLC domain-co... [more]
XP_023550889.14.1e-15097.86TLC domain-containing protein 2 [Cucurbita pepo subsp. pepo][more]
XP_038884583.12.2e-13588.21TLC domain-containing protein 2 [Benincasa hispida][more]
XP_004150440.16.5e-13286.17TLC domain-containing protein 2 [Cucumis sativus] >KGN47727.1 hypothetical prote... [more]
Match NameE-valueIdentityDescription
AT1G21790.11.4e-10369.55TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainSMARTSM00724lag1_27coord: 62..269
e-value: 8.3E-29
score: 111.7
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 69..258
e-value: 8.2E-18
score: 64.8
IPR006634TRAM/LAG1/CLN8 homology domainPROSITEPS50922TLCcoord: 62..270
score: 14.799915
NoneNo IPR availablePANTHERPTHR13439:SF4TLC DOMAIN-CONTAINING PROTEIN FLD-1coord: 16..275
NoneNo IPR availablePANTHERPTHR13439CT120 PROTEINcoord: 16..275

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G006770.1CmaCh15G006770.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071709 membrane assembly
biological_process GO:0055091 phospholipid homeostasis
biological_process GO:0007009 plasma membrane organization
biological_process GO:0097035 regulation of membrane lipid distribution
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane