CmaCh15G006160 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCTTCAGCCACCAGAAAGCGAAAGATGAAGAAGCCGCCGGCGCCGCCGAGGGCCGCCAAAGCCCAACCGGCGGCGAAAAGAAGGACCAATGATAAGTCGAAGAAAATCATTGAAGTAGAAGAAGACGCCTCAGAGTTAAGGCACATGGTTCAATTCCCTGGCAGCAGTAGCAGCCGCTCCGACTCCGATTCCGACCACCCTTCTACTTCCACTTCCACTTCTACTTCTTCTTCCACTTTTTCCGATGGCCGGAATGGTTTGTCACAGTCGTCGGAAGAACTCAGCGTTTATGATTACGAGGGCTGGGAAGACCCTCTTGTAATTGTAAATCCACGGCCCTCTCCCGGAATTCCTCCCTTAACAACGTATTCCGGTTTTGATTACTCCGGTTTGGTTTATCCACTTCCGCCGGTTTTCAAGAACCCTCTGCCTCCACTTTACTACCGACCCAAATTTCCCGACCCCCATTAA ATGGATTCTTCAGCCACCAGAAAGCGAAAGATGAAGAAGCCGCCGGCGCCGCCGAGGGCCGCCAAAGCCCAACCGGCGGCGAAAAGAAGGACCAATGATAAGTCGAAGAAAATCATTGAAGTAGAAGAAGACGCCTCAGAGTTAAGGCACATGGTTCAATTCCCTGGCAGCAGTAGCAGCCGCTCCGACTCCGATTCCGACCACCCTTCTACTTCCACTTCCACTTCTACTTCTTCTTCCACTTTTTCCGATGGCCGGAATGGTTTGTCACAGTCGTCGGAAGAACTCAGCGTTTATGATTACGAGGGCTGGGAAGACCCTCTTGTAATTGTAAATCCACGGCCCTCTCCCGGAATTCCTCCCTTAACAACGTATTCCGGTTTTGATTACTCCGGTTTGGTTTATCCACTTCCGCCGGTTTTCAAGAACCCTCTGCCTCCACTTTACTACCGACCCAAATTTCCCGACCCCCATTAA ATGGATTCTTCAGCCACCAGAAAGCGAAAGATGAAGAAGCCGCCGGCGCCGCCGAGGGCCGCCAAAGCCCAACCGGCGGCGAAAAGAAGGACCAATGATAAGTCGAAGAAAATCATTGAAGTAGAAGAAGACGCCTCAGAGTTAAGGCACATGGTTCAATTCCCTGGCAGCAGTAGCAGCCGCTCCGACTCCGATTCCGACCACCCTTCTACTTCCACTTCCACTTCTACTTCTTCTTCCACTTTTTCCGATGGCCGGAATGGTTTGTCACAGTCGTCGGAAGAACTCAGCGTTTATGATTACGAGGGCTGGGAAGACCCTCTTGTAATTGTAAATCCACGGCCCTCTCCCGGAATTCCTCCCTTAACAACGTATTCCGGTTTTGATTACTCCGGTTTGGTTTATCCACTTCCGCCGGTTTTCAAGAACCCTCTGCCTCCACTTTACTACCGACCCAAATTTCCCGACCCCCATTAA MDSSATRKRKMKKPPAPPRAAKAQPAAKRRTNDKSKKIIEVEEDASELRHMVQFPGSSSSRSDSDSDHPSTSTSTSTSSSTFSDGRNGLSQSSEELSVYDYEGWEDPLVIVNPRPSPGIPPLTTYSGFDYSGLVYPLPPVFKNPLPPLYYRPKFPDPH Homology
BLAST of CmaCh15G006160 vs. ExPASy TrEMBL
Match: A0A5D3DJD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00240 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.7e-05 Identity = 67/188 (35.64%), Postives = 84/188 (44.68%), Query Frame = 0
BLAST of CmaCh15G006160 vs. NCBI nr
Match: KAG6578907.1 (hypothetical protein SDJN03_23355, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 260.8 bits (665), Expect = 7.8e-66 Identity = 145/160 (90.62%), Postives = 148/160 (92.50%), Query Frame = 0
BLAST of CmaCh15G006160 vs. NCBI nr
Match: KAE8647158.1 (hypothetical protein Csa_018821 [Cucumis sativus]) HSP 1 Score: 65.1 bits (157), Expect = 6.3e-07 Identity = 67/197 (34.01%), Postives = 87/197 (44.16%), Query Frame = 0
BLAST of CmaCh15G006160 vs. NCBI nr
Match: KAA0058917.1 (hypothetical protein E6C27_scaffold98G00860 [Cucumis melo var. makuwa] >TYK23713.1 hypothetical protein E5676_scaffold1607G00240 [Cucumis melo var. makuwa]) HSP 1 Score: 59.3 bits (142), Expect = 3.4e-05 Identity = 67/188 (35.64%), Postives = 84/188 (44.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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