CmaCh15G004840 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G004840
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ATP-dependent RNA helicase DDX42
Location	Cma_Chr15: 2163975 .. 2168292 (-)
RNA-Seq Expression	CmaCh15G004840
Synteny	CmaCh15G004840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCGTCCCTTTGAATAGAAAATAGTCACTTTACACAAAAACGGAACATCCCTTGTTTGCGCCTACTCTTGCAAGTCGCCGCAGCAGCGGCAGCTCCAGACAAATCTTTGGCTCTCTGAGATCAATGGCGAAGGGCGACGATGCGTTGGCGAGAAAAAGGAACAAAGCCTCTCGGAAGAAGCTCCGGAGTAAGAACGGAGACTCTTCGTCTGTTTCTGCGCGCGTTGCCGCCATAATCGCCGCCAAGAAGCGGCGTAAGTCCGGCAAACGCAGAAACTGCCAGGTAACTTCGAAAGTATTAATTCTTGTGTGTTTTCATCATATTTGTGGATTTATGAAGTTACTGTATGCTTTAGAGTAGCGTTCTATGCTTGAGGAATGACATTAGTAGAAAAGGGGCTATTCAGTTTGGATTTATCATTGGTAGGCGAAGTTTATCTTGCTTTAGGGATGATATAAATTATAAAGTAGTGTTGTTCGATTCGCAGCAGCACAATATGAAAATGCTTGTCTGCAAAGATGATTTTCCGTGATTGATTTGTTTTAGATCACACTTGGTAACTCGTAAATTAAGTTCGCTGTTCATCATGCTGACTCTTGGGACATTGATTATACTGATTCGCCGAAATGTTACCTGTTTTTTTTGTTTTTTTTTGCAAGTCGTCTCTATTAATTACTCCGACTGTGTAATATACGGAGTCTGAATTCGCTACATTACAGGGAATGTGCTTTAGCCTTCCTACTCTTGATGATCCCTACAATGATAGGAATGGGAACAAGGACTTGGATAAGAAGGAAACTAAGGTCAGGCCTTCAAAAGGCTCCAAGAGGGAATTTCCAAAGGATAATAGTTCTTCAGCACCTAATGGAACCCGTGGAGACGCTTGCCGTGAGAAAGTTAGGAGTTCAAAAGAAGGGTCTGGAGATGCCACCAGTGGCCACATAGCCAAAAGAAGCAAGACTTGTCCTGAAAGAACAAAAGTTAATGCGAATGTGGAAGGCAGTGTACAAGACTTTCAAGAGGAAGGCTTTGACAGTTCTATCTCTCCCTCAAAGTTTCTTATACTTTGCTTAAATGCAATAGAGAAGGCTCTATATCATGATTCTTTTAAAGGGATCAACGAGCCTTTGCCAGCTGATGCCTGGGGAATTGAGTTCTGGAAATGTTATTCTTCTGGGAAGGATATTCTGGACACCAGTGGGTTGTCTTCTACAGATGAGAAAATTGCATGGGTGGTTTCTTCGGCTGCTGACAGTATTGCTAGAAAAGAGAAAGAAGGTTTATCATTTAGTAGCCCATATCTTTTATTTCTTGTTCCTACCCAAGAGAAAGCTACTCAGATTCGCTCCATGTGCAAGCCATTGAAGGCTCTTGGAGTACATACAGTGAGCATACATTCTGGGGCATCCCTAGACCACCAAATTCAAGGGTAAGCTTGATCGTGTGTCATGGTACATTGTAACAGTTTTTTTGTTTGAGAATGAGCTGTGAAATATTTTAGAGTAGAAGTTCTTTATTTATTTTCATCTTGTACCTGCCGCTGTTCATACCATGTATATGTATTTAGCACTGTAAACAATTTGGACTCCACCTGATTTTTCTATTTTATATCTAATTGGAAAGTTATCTCTCTTTCCATAGTTTGAAAAGCTGTGAACCTGAATTTCTCGTGTCCACACCTGAGAGACTCTTAGAGCTCGTTGCCATGCAGGCTATTGATATAGCTGGTGTTTCATTGCTGGTAATTTGACAGTCTATGTTTATTATTTGAAGTATCGTTTTGAATTTTGTAATCTTTATTTTTTGTGATGAATTTTAATGATTATAAAATGTTTTTACTGTTTCAGACCTTCTTATCTAGTTATTCGCTGAGGCTTTGTAGATGTCTTTTCTGCAATTAAGGATTAAAATAATTGATGGATCAATAATGGATGATATTAAGATTAATAGATGATTAAGACCTCCTAAGGATAAGAGACATAGGGCTAAAGAGAGAGCCAAAAGAGGATTGTGTAGAATCCTGCATAATCTCGAATGTTATCAGTTCCGGTACGTAGACCAAATGATACAATGCGAGCAAACAGTTCTTTTTACTTTTAAACGAAGTTACAAATCTTGTTTTTAGTATTTATATTAATACTAAGAATAATAGATGATATATATATATATATATATATATACATATATACACGCGCGCGCACACACATATATATTAGAAAGTATCAATTAATTCTTAATATTGATGAATATTTTGATATTTGTTTACAATGCATTGTCTCAATTATAATCCTTCAGATGATGAACAAGTGGCTTGTTTTTACTTTTGAAGTATAAAGTGAGTCGCAAAATGCTTATTGTCAGTATTATGGACATTCTGCTTTAAGATTTATAATTTCCTTGACGTTTTTCAGGTCGTCGATGGACTGGATTCTTTTTCAAAAGGTGGTTCTCTTGAAATGATACAATCCATCAGGAAGTCTATATCAAGCAATCTGTATACTTTTGTTTTCAGTGATAGCTTCAGCTGTGCCTATGTCCCAGTTGTACAAGATCTCCTCAGTGGCCCAATTCAAAGACTATCTCTTAATACTTCTGTGGCCAGTCGAAGTGCCTGCATTATTCAGTCGATAAACTTCTTTACATCTGAAGAGGAAAAACTATCAAAGGTACGTATGTACATCAACTTCATATATTTCAGTGCAGCCTCTGGTTTGTTAACTGCTGGGGAATCTCTGTTCAGTCTTCCAAAACCGTTTTCAGAAGGAAAAACCTTATGATGAGTTGTATTTTATTGTGAGCCTAACTTCTTAAACCTTGAGGTAGCAGTCATTTGCCAAGTTGTGATGTAAAATGGATAGATGTCGTATCCCAGTTTCTAGGAAATTTTTGATTGTGGATGTGACCCTCACATCCTGATACTGTTCAATCACTTTTGAACTTTTCACTTTTTAGTTGGTAATTCTTACTCCTAAAGTCATAGTTTGCAGCAATACTAAGAAACGAAGCTTCTCCTTTTATCATCGACTTTTCATTTTACTCTCTCACACTAGGATTGGAAATTCTATTAACAGTCATCATTAATGATCTTTGAAGGTCATCCAAGCTTTGGATAGAGCCAATGGCAGTCAGCTCTGCCCACAGCCGTTGAAGATGCTCTTTATTCTTGGGAAGGAGTGTAATGTTCAGGAATTAGCTGCTGCTCTTAAATCCAAAGGCCATGATATTGTAGCGGGAGCATTATGTGGTGTCCCAGAACTTAAGAACAAGTAAGCATGCGCATGCCACTAGCTTTTTTATGCTATTCTAAAGGTTTTTTAAAAGAAAAAAATCGAAAATTTCATACTACAAAGAAAGATTGTTTTTTAATATAAATATTTTAAATTATTATTTTTACCTGAATCATATGCATTAGCCTTCAAGTAGTTGATTCCTTTCTAATTTCCTACTTGGATTTTTGAGTCTATGCATAGTTGCTAAACAAGGATTGGTTTTTTAGTAAGGCACGAAATGTTTTGTTAAATATTCAATATGATTTTATAAGATCTAGTTTCGAATTATAGCCAATTGAAAGGATCTTCTAATCATTTTAGAGAACATTTCGATTCTATCGATAATCTTTCTAAGATATGCATGTAGAAAATGGAAGGCCTCTCCTAGTTGGGTAGTGTGCTTTTGAATTTCATTGGTAAACATTGGCACTAGAACTGCGGATTCCAGAAAAATGTCGTGTGTCTTTCAAATGTTTAGTTATTATTAATGCCTCCATTCTCTACTAGGAAAAAAGGATTGGCACATGTTTCTTCCTCCAATCATTTTTCATCCATATTTGTATTTATACTCTTCGAAAAACTCATATTTTTACCCTTTTCATTTTTTATTAGTTCGGAAGTAGACAGCAGATCGAGGCCCGTGGTAGCCAAGATTGATATAGAGCAAATTAATACCATAGATCTGGGAAATTATGATAGCATATTCATACTCTATGCCTTTCCACCAATAGACAAATATGTTCAGATTCTAACAGGAATGGCTCGTCATACGGTCAATGGTGTGTTGCACAGCTTCATTACCAAGGAAGAAGCATCATTTGCTGGTTCCTTGGTTGAAATCCTTGAAGAATGTGGGCAGGCTGTTCCTGAAACTGTAAGAAACTTATCCCTTACAAAAGCCACATCTCAATCTTGATCATCAATTGCCTCTTCTAATTGCCATCATCATGTCTGTATAATCAAAATTTTGACCATTGAAATCTTTTTTTTTTTTTTTTTTTTAAATCATGTACTGATTACTTTCTACACTTTCATCGAAGAATTCTAC

mRNA sequence

TCTCGTCCCTTTGAATAGAAAATAGTCACTTTACACAAAAACGGAACATCCCTTGTTTGCGCCTACTCTTGCAAGTCGCCGCAGCAGCGGCAGCTCCAGACAAATCTTTGGCTCTCTGAGATCAATGGCGAAGGGCGACGATGCGTTGGCGAGAAAAAGGAACAAAGCCTCTCGGAAGAAGCTCCGGAGTAAGAACGGAGACTCTTCGTCTGTTTCTGCGCGCGTTGCCGCCATAATCGCCGCCAAGAAGCGGCGTAAGTCCGGCAAACGCAGAAACTGCCAGGGAATGTGCTTTAGCCTTCCTACTCTTGATGATCCCTACAATGATAGGAATGGGAACAAGGACTTGGATAAGAAGGAAACTAAGGTCAGGCCTTCAAAAGGCTCCAAGAGGGAATTTCCAAAGGATAATAGTTCTTCAGCACCTAATGGAACCCGTGGAGACGCTTGCCGTGAGAAAGTTAGGAGTTCAAAAGAAGGGTCTGGAGATGCCACCAGTGGCCACATAGCCAAAAGAAGCAAGACTTGTCCTGAAAGAACAAAAGTTAATGCGAATGTGGAAGGCAGTGTACAAGACTTTCAAGAGGAAGGCTTTGACAGTTCTATCTCTCCCTCAAAGTTTCTTATACTTTGCTTAAATGCAATAGAGAAGGCTCTATATCATGATTCTTTTAAAGGGATCAACGAGCCTTTGCCAGCTGATGCCTGGGGAATTGAGTTCTGGAAATGTTATTCTTCTGGGAAGGATATTCTGGACACCAGTGGGTTGTCTTCTACAGATGAGAAAATTGCATGGGTGGTTTCTTCGGCTGCTGACAGTATTGCTAGAAAAGAGAAAGAAGGTTTATCATTTAGTAGCCCATATCTTTTATTTCTTGTTCCTACCCAAGAGAAAGCTACTCAGATTCGCTCCATGTGCAAGCCATTGAAGGCTCTTGGAGTACATACAGTGAGCATACATTCTGGGGCATCCCTAGACCACCAAATTCAAGGTTTGAAAAGCTGTGAACCTGAATTTCTCGTGTCCACACCTGAGAGACTCTTAGAGCTCGTTGCCATGCAGGCTATTGATATAGCTGGTGTTTCATTGCTGGTCGTCGATGGACTGGATTCTTTTTCAAAAGGTGGTTCTCTTGAAATGATACAATCCATCAGGAAGTCTATATCAAGCAATCTGTATACTTTTGTTTTCAGTGATAGCTTCAGCTGTGCCTATGTCCCAGTTGTACAAGATCTCCTCAGTGGCCCAATTCAAAGACTATCTCTTAATACTTCTGTGGCCAGTCGAAGTGCCTGCATTATTCAGTCGATAAACTTCTTTACATCTGAAGAGGAAAAACTATCAAAGGTCATCCAAGCTTTGGATAGAGCCAATGGCAGTCAGCTCTGCCCACAGCCGTTGAAGATGCTCTTTATTCTTGGGAAGGAGTGTAATGTTCAGGAATTAGCTGCTGCTCTTAAATCCAAAGGCCATGATATTGTAGCGGGAGCATTATGTGGTGTCCCAGAACTTAAGAACAATTCGGAAGTAGACAGCAGATCGAGGCCCGTGGTAGCCAAGATTGATATAGAGCAAATTAATACCATAGATCTGGGAAATTATGATAGCATATTCATACTCTATGCCTTTCCACCAATAGACAAATATGTTCAGATTCTAACAGGAATGGCTCGTCATACGGTCAATGGTGTGTTGCACAGCTTCATTACCAAGGAAGAAGCATCATTTGCTGGTTCCTTGGTTGAAATCCTTGAAGAATGTGGGCAGGCTGTTCCTGAAACTGTAAGAAACTTATCCCTTACAAAAGCCACATCTCAATCTTGATCATCAATTGCCTCTTCTAATTGCCATCATCATGTCTGTATAATCAAAATTTTGACCATTGAAATCTTTTTTTTTTTTTTTTTTTTAAATCATGTACTGATTACTTTCTACACTTTCATCGAAGAATTCTAC

Coding sequence (CDS)

ATGGCGAAGGGCGACGATGCGTTGGCGAGAAAAAGGAACAAAGCCTCTCGGAAGAAGCTCCGGAGTAAGAACGGAGACTCTTCGTCTGTTTCTGCGCGCGTTGCCGCCATAATCGCCGCCAAGAAGCGGCGTAAGTCCGGCAAACGCAGAAACTGCCAGGGAATGTGCTTTAGCCTTCCTACTCTTGATGATCCCTACAATGATAGGAATGGGAACAAGGACTTGGATAAGAAGGAAACTAAGGTCAGGCCTTCAAAAGGCTCCAAGAGGGAATTTCCAAAGGATAATAGTTCTTCAGCACCTAATGGAACCCGTGGAGACGCTTGCCGTGAGAAAGTTAGGAGTTCAAAAGAAGGGTCTGGAGATGCCACCAGTGGCCACATAGCCAAAAGAAGCAAGACTTGTCCTGAAAGAACAAAAGTTAATGCGAATGTGGAAGGCAGTGTACAAGACTTTCAAGAGGAAGGCTTTGACAGTTCTATCTCTCCCTCAAAGTTTCTTATACTTTGCTTAAATGCAATAGAGAAGGCTCTATATCATGATTCTTTTAAAGGGATCAACGAGCCTTTGCCAGCTGATGCCTGGGGAATTGAGTTCTGGAAATGTTATTCTTCTGGGAAGGATATTCTGGACACCAGTGGGTTGTCTTCTACAGATGAGAAAATTGCATGGGTGGTTTCTTCGGCTGCTGACAGTATTGCTAGAAAAGAGAAAGAAGGTTTATCATTTAGTAGCCCATATCTTTTATTTCTTGTTCCTACCCAAGAGAAAGCTACTCAGATTCGCTCCATGTGCAAGCCATTGAAGGCTCTTGGAGTACATACAGTGAGCATACATTCTGGGGCATCCCTAGACCACCAAATTCAAGGTTTGAAAAGCTGTGAACCTGAATTTCTCGTGTCCACACCTGAGAGACTCTTAGAGCTCGTTGCCATGCAGGCTATTGATATAGCTGGTGTTTCATTGCTGGTCGTCGATGGACTGGATTCTTTTTCAAAAGGTGGTTCTCTTGAAATGATACAATCCATCAGGAAGTCTATATCAAGCAATCTGTATACTTTTGTTTTCAGTGATAGCTTCAGCTGTGCCTATGTCCCAGTTGTACAAGATCTCCTCAGTGGCCCAATTCAAAGACTATCTCTTAATACTTCTGTGGCCAGTCGAAGTGCCTGCATTATTCAGTCGATAAACTTCTTTACATCTGAAGAGGAAAAACTATCAAAGGTCATCCAAGCTTTGGATAGAGCCAATGGCAGTCAGCTCTGCCCACAGCCGTTGAAGATGCTCTTTATTCTTGGGAAGGAGTGTAATGTTCAGGAATTAGCTGCTGCTCTTAAATCCAAAGGCCATGATATTGTAGCGGGAGCATTATGTGGTGTCCCAGAACTTAAGAACAATTCGGAAGTAGACAGCAGATCGAGGCCCGTGGTAGCCAAGATTGATATAGAGCAAATTAATACCATAGATCTGGGAAATTATGATAGCATATTCATACTCTATGCCTTTCCACCAATAGACAAATATGTTCAGATTCTAACAGGAATGGCTCGTCATACGGTCAATGGTGTGTTGCACAGCTTCATTACCAAGGAAGAAGCATCATTTGCTGGTTCCTTGGTTGAAATCCTTGAAGAATGTGGGCAGGCTGTTCCTGAAACTGTAAGAAACTTATCCCTTACAAAAGCCACATCTCAATCTTGA

Protein sequence

MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLPTLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGSGDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYHDSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEGLSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSFSCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGSQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVVAKIDIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSLVEILEECGQAVPETVRNLSLTKATSQS

Homology

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BLAST of CmaCh15G004840 vs. ExPASy Swiss-Prot
Match: Q5VQL1 (DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0172200 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 9.5e-16
Identity = 125/507 (24.65%), Postives = 216/507 (42.60%), Query Frame = 0


Query: 65  PYNDRNGNKDLD---KKETKVRPSKGSKREFPKDNS----SSAPNGTRGDACREKVRSSK 124
           P +DR  N  L+   ++ T+   S      F + N+    SS P    G    + V  S+
Sbjct: 92  PADDRARNDHLNDHFERRTEAAGSHAQNVPFTEQNTRSNPSSQPCSAAGVYPAQNV-FSE 151

Query: 125 EGSGDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKA 184
             SGD TS   A R+K   E T V          FQ  GF   I         L  +++A
Sbjct: 152 AASGDRTSPE-AYRAK--HEITIVGNEAPAPFMTFQSTGFPPEI---------LREVQQA 211

Query: 185 LYHDSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKE 244
                  G + P P  A   + W      +DI+  +   S  + + +++      I  K 
Sbjct: 212 -------GFSAPTPIQA---QSWPIALRNRDIVAVAKTGS-GKTLGYLIPG---FILLKR 271

Query: 245 KEGLSFSSPYLLFLVPTQEKATQIRSMCKPL-KALGVHTVSIHSGASLDHQIQGLKSCEP 304
            +  S   P +L L PT+E ATQI+   K   ++  + +V ++ GA    Q++ L+    
Sbjct: 272 LQHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLER-GA 331

Query: 305 EFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVF 364
           + +V+TP RL +++ M+ + +  VS LV+D  D     G    I+ I K +     T +F
Sbjct: 332 DIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMF 391

Query: 365 SDSFSCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRA 424
           + ++      +  DLLS P+Q    NT     +  I Q ++  T  E+      + LD+ 
Sbjct: 392 TATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKS-----RRLDQI 451

Query: 425 NGSQLCPQPLKMLFILGKECNVQELAAAL-KSKGHDIVAGALCGVPELKNNSEVDSRSR- 484
             SQ   +P   + I    C+ + +   L ++      A A+ G         V S  R 
Sbjct: 452 LRSQ---EPGSKIIIF---CSTKRMCDQLARNLARQYGASAIHGDKSQAERDSVLSEFRS 511

Query: 485 ---PVVAKIDIEQINTIDLGNYDSIFILYAFPP-IDKYVQILTGMARHTVNGVLHSFITK 544
              P++   D+     +D+ +   + + Y FP  ++ YV  +    R    GV ++F   
Sbjct: 512 GRCPILVATDV-AARGLDIKDI-RVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCD 557

Query: 545 EEASFAGSLVEILEECGQAVPETVRNL 558
           +++ +A  LV+ILE   Q+V + +R++
Sbjct: 572 QDSKYASDLVKILEGANQSVSQQLRDM 557

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BLAST of CmaCh15G004840 vs. ExPASy Swiss-Prot
Match: Q8W4R3 (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 PE=1 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 2.1e-15
Identity = 103/431 (23.90%), Postives = 187/431 (43.39%), Query Frame = 0


Query: 138 RTKVNANVEG-----SVQDFQEEGFDSSISPSKFLILCLNAIEKALYHDSFKGINEPLPA 197
           RT+ + +VEG      ++ FQ+  F  +I         L AI K        G  EP P 
Sbjct: 148 RTERDISVEGRDVPKPMKMFQDANFPDNI---------LEAIAKL-------GFTEPTPI 207

Query: 198 DAWGIEFWKCYSSGKDILDTSGLSSTDE-KIAWVVSSAADSIARKEKEGLSFSSPYLLFL 257
            A G   W     G+D++   G++ T   K    +  A   ++ + + G     P +L L
Sbjct: 208 QAQG---WPMALKGRDLI---GIAETGSGKTLAYLLPALVHVSAQPRLGQD-DGPIVLIL 267

Query: 258 VPTQEKATQIRSMCKPL-KALGVHTVSIHSGASLDHQIQGLKSCEPEFLVSTPERLLELV 317
            PT+E A QI+   +      GV +  I+ GA    QI+ L+    E +++TP RL++++
Sbjct: 268 APTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRR-GVEIVIATPGRLIDML 327

Query: 318 AMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSFSCAYVPVVQD 377
             Q  ++  V+ LV+D  D     G    I+ I   I  +  T ++S ++      + + 
Sbjct: 328 ECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQ 387

Query: 378 LLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDR-ANGSQLCPQPLKML 437
            L  P + +  +T + +  +  I  +       EK ++++  L +  +GS       K+L
Sbjct: 388 FLRDPYKAIIGSTDLKANQS--INQVIEIVPTPEKYNRLLTLLKQLMDGS-------KIL 447

Query: 438 FILGKECNVQELAAALKSKGHDIVA--GALCGVPELKNNSEVDSRSRPVVAKIDIEQINT 497
             +  +    ++   L+  G   +A  G        +  +E  S   P++   D+     
Sbjct: 448 IFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDV-AARG 507

Query: 498 IDLGNYDSIFILYAFP-PIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSLVEILEEC 557
           +D+ +   + + Y FP  ++ Y+  +    R    G+  +F T + A FA  LV+IL+E 
Sbjct: 508 LDVKDIKCV-VNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEA 543

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BLAST of CmaCh15G004840 vs. ExPASy Swiss-Prot
Match: Q54CD6 (Probable ATP-dependent RNA helicase ddx5 OS=Dictyostelium discoideum OX=44689 GN=ddx5 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 8.0e-15
Identity = 85/369 (23.04%), Postives = 161/369 (43.63%), Query Frame = 0


Query: 200 WKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEGLS----------FSSPYLL 259
           W    +G DI+ TS L  + + + ++       +AR ++ G +          ++   +L
Sbjct: 237 WPAILTGHDIIGTS-LPGSGKTLGYLAPMIPHCLARVDRGGKNKITGEKAPKQYTGILVL 296

Query: 260 FLVPTQEKATQIRSMCKPLKAL-GVHTVSIHSGASLDHQIQGLKSCEPEFLVSTPERLLE 319
            LVPT+E   Q+ S    +  L G+ T  I+ G S + QI+ L+  +P+ L+STP RL+E
Sbjct: 297 VLVPTRELGLQVHSNTLIITQLFGIKTSVIYGGISKNLQIEQLEKEKPQILISTPGRLIE 356

Query: 320 LVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSFSCAYVPVV 379
           ++    +D++ V++LV+D  D     G +  ++ IR  I  +    +FS +F  +   V 
Sbjct: 357 MIENGHVDLSSVTMLVLDEADKMLSKGLIPQLKQIRGQIRPDSQNILFSATFPDSLKEVS 416

Query: 380 QDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGSQLCPQPLKM 439
           +D +  P  RL + +S   +   I Q        ++      +AL +        +  K 
Sbjct: 417 KDWIKDPSIRLRIGSSELPKLNHIQQDAQLIAHHKKP-----RALIKLLSEPQFKEKKKT 476

Query: 440 LFILGKECNVQELAAALKSKG--HDIVAGALCGVPELKNNSEVDSRSRPVVAKIDI--EQ 499
           +    K   ++ ++  L      HD + G +      K  ++  S    ++   DI    
Sbjct: 477 IVFFNKIKELKRISIMLLKSNIKHDTIFGNIDQELREKLINKFSSSRSTLLLSTDIIGRG 536

Query: 500 INTIDLGNYDSIFILYAFP-PIDKYVQIL--TGMARHTVNGVLHSFITKEEASFAGSLVE 551
           I+  D+ N     I Y FP  +++Y   +   G +   VN    SF+T  ++      V+
Sbjct: 537 IHIDDIFN----IINYDFPRSLEQYCHRVGRAGRSDKVVNPKAFSFLTNSDSYLVEPFVQ 595

[Close]

BLAST of CmaCh15G004840 vs. ExPASy Swiss-Prot
Match: O22907 (DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana OX=3702 GN=RH24 PE=1 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 2.3e-14
Identity = 91/363 (25.07%), Postives = 160/363 (44.08%), Query Frame = 0


Query: 205 SGKDILD--TSGLSSTDEKIAWVVSSAADSIARKEKEGLSFSSPYLLFLVPTQEKATQIR 264
           SG+D++    +G   T   +  ++    D    +  EG     P  +   PT+E A QI 
Sbjct: 264 SGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEG-----PIGVICAPTRELAHQIF 323

Query: 265 SMCKPL-KALGVHTVSIHSGASLDHQIQGLKS-CEPEFLVSTPERLLELVAMQAIDIAGV 324
              K   KA G+   +++ G S   Q + LK+ C  E +V+TP RL++++ M+A+ +   
Sbjct: 324 LEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGC--EIVVATPGRLIDMLKMKALTMMRA 383

Query: 325 SLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSFSCAYVPVVQDLLSGPIQRLS 384
           S LV+D  D     G    ++SI   I  +  T +FS +       + +++LS PI+   
Sbjct: 384 SYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTV 443

Query: 385 LNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGSQLCPQPLKMLFILGKECNVQE 444
               +A+    I Q +N   S+ EKL  +++ L              +L    K+  V E
Sbjct: 444 GEVGMANED--ITQVVNVIPSDAEKLPWLLEKLPGMIDEG------DVLVFASKKATVDE 503

Query: 445 LAAALKSKGHDIVA--GALCGVPELKNNSEVDSRSRPVVAKIDIEQINTIDLGNYDSIFI 504
           + A L      + A  G       ++   +  S    V+   D+     +D+ +  ++  
Sbjct: 504 IEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDV-AARGLDIKSLKTVVN 563

Query: 505 LYAFPPIDKYVQIL--TGMARHTVNGVLHSFITKEEASFAGSLVEILEECGQAVPETVRN 560
                 +D +V  +  TG A    +GV ++ +T+ EA FAG LV  L   GQ VP  + +
Sbjct: 564 YDIAKDMDMHVHRIGRTGRAGDR-DGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTD 609

[Close]

BLAST of CmaCh15G004840 vs. ExPASy Swiss-Prot
Match: Q10MH8 (DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0308500 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.3e-14
Identity = 105/442 (23.76%), Postives = 190/442 (42.99%), Query Frame = 0


Query: 137 ERTKVNANVEGSVQDFQE------EGFD-----SSISPSKFLILCLNAIEKALYHDSFKG 196
           E+  V+   E  V D+ +       GFD      S +   F +  +NAI K       +G
Sbjct: 186 EKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAK-------QG 245

Query: 197 INEPLPADAWGIEFWKCYSSGKDILD--TSGLSSTDEKIAWVVSSAADSIARKEKEGLSF 256
             +P       +       SG+DI+    +G   T   +  ++    D    +++EG   
Sbjct: 246 YEKPTTIQCQALPI---VLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEG--- 305

Query: 257 SSPYLLFLVPTQEKATQIRSMCKPL-KALGVHTVSIHSGASLDHQIQGLKS-CEPEFLVS 316
             P  +   PT+E A QI    K   K   +   +++ G S   Q + LK+ C  E +++
Sbjct: 306 --PIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGC--EIVIA 365

Query: 317 TPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSFS 376
           TP RL++L+ M+A+ +   + LV+D  D     G    I+SI   I  +  T +FS +  
Sbjct: 366 TPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP 425

Query: 377 CAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGSQL 436
                + +++L+ PI R+++   V S +  I Q +N   S+ EK+  +++ L        
Sbjct: 426 YKVERLAREILTDPI-RVTVG-QVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMIDDG- 485

Query: 437 CPQPLKMLFILGKECNVQELAAALKSKGHDIVA--GALCGVPELKNNSEVDSRSRPVVAK 496
                 +L    K+  V E+ + L  +G  I A  G       ++   +  S    V+  
Sbjct: 486 -----DVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVA 545

Query: 497 IDIEQINTIDLGNYDSIFILYAFPPIDKYVQIL--TGMARHTVNGVLHSFITKEEASFAG 556
            D+     +D+ +  ++        +D ++  +  TG A    +G  ++ IT++E  FAG
Sbjct: 546 TDV-AARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDK-DGTAYTLITQKEVRFAG 600

Query: 557 SLVEILEECGQAVPETVRNLSL 560
            LV  L   GQ VP  + +L++
Sbjct: 606 ELVHCLIAAGQDVPNELMDLAM 600

[Close]

BLAST of CmaCh15G004840 vs. ExPASy TrEMBL
Match: A0A6J1JVP3 (ATP-dependent RNA helicase DDX42 OS=Cucurbita maxima OX=3661 GN=LOC111489296 PE=4 SV=1)

HSP 1 Score: 1090.5 bits (2819), Expect = 0.0e+00
Identity = 566/566 (100.00%), Postives = 566/566 (100.00%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120
           TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
           GDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYH
Sbjct: 121 GDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180

Query: 181 DSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240
           DSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG
Sbjct: 181 DSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240

Query: 241 LSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV 300
           LSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV
Sbjct: 241 LSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV 300

Query: 301 STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSF 360
           STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSF
Sbjct: 301 STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSF 360

Query: 361 SCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGSQ 420
           SCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGSQ
Sbjct: 361 SCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGSQ 420

Query: 421 LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVVAKI 480
           LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVVAKI
Sbjct: 421 LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVVAKI 480

Query: 481 DIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSLV 540
           DIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSLV
Sbjct: 481 DIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSLV 540

Query: 541 EILEECGQAVPETVRNLSLTKATSQS 567
           EILEECGQAVPETVRNLSLTKATSQS
Sbjct: 541 EILEECGQAVPETVRNLSLTKATSQS 566

[Close]

BLAST of CmaCh15G004840 vs. ExPASy TrEMBL
Match: A0A6J1FKA1 (ATP-dependent RNA helicase DDX42 OS=Cucurbita moschata OX=3662 GN=LOC111444991 PE=4 SV=1)

HSP 1 Score: 1042.3 bits (2694), Expect = 7.2e-301
Identity = 544/566 (96.11%), Postives = 551/566 (97.35%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120
           TLDDPYNDRNGNKDLDKKETKV PSKGSKREFPKD SSSAPN TRGDACREKVRSSKEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVTPSKGSKREFPKDKSSSAPNRTRGDACREKVRSSKEGS 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
           GDATSGHIAKRSKTCPERTKVNAN EG VQDFQEEGFDSSISPSKFLILCLNAIEKALYH
Sbjct: 121 GDATSGHIAKRSKTCPERTKVNANGEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180

Query: 181 DSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240
           DSFKGIN+PL ADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG
Sbjct: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240

Query: 241 LSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV 300
           LSFSSPYLLFLVPTQEKAT +RSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV
Sbjct: 241 LSFSSPYLLFLVPTQEKATHVRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV 300

Query: 301 STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSF 360
           STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGG LEMIQSIRKSISSNL+T VFSDSF
Sbjct: 301 STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTIVFSDSF 360

Query: 361 SCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGSQ 420
           SCAYVPVVQDLLSGPIQRLSLN SVASRSACIIQSINF TSEE KLSKVIQALDRANGSQ
Sbjct: 361 SCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEGKLSKVIQALDRANGSQ 420

Query: 421 LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVVAKI 480
           LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGAL GVPE+KNNSEVDSR RPVVAKI
Sbjct: 421 LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRWRPVVAKI 480

Query: 481 DIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSLV 540
           D+EQINTIDLGNYDSIFILYAFP IDKYVQILTGMARHTVNGVLH+FITKEEASFAGSLV
Sbjct: 481 DMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEASFAGSLV 540

Query: 541 EILEECGQAVPETVRNLSLTKATSQS 567
           EILEECGQAVPETVRNLSLT+ATSQS
Sbjct: 541 EILEECGQAVPETVRNLSLTQATSQS 566

[Close]

BLAST of CmaCh15G004840 vs. ExPASy TrEMBL
Match: A0A0A0LQJ4 (DEAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G386150 PE=4 SV=1)

HSP 1 Score: 892.9 bits (2306), Expect = 7.0e-256
Identity = 470/567 (82.89%), Postives = 506/567 (89.24%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDAL RKRNKASRKKLRSK+GDSS+VSARVA+IIAAKKRR SGKRR CQGMCFSLP
Sbjct: 1   MAKGDDALTRKRNKASRKKLRSKSGDSSAVSARVASIIAAKKRRMSGKRRQCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120
           T DDPYNDRNG     KK+TKV+PSK SKREFPK+ S+SAPNGT  D C E  RSSKEGS
Sbjct: 61  TPDDPYNDRNG-----KKDTKVKPSKSSKREFPKEKSTSAPNGTLRDVCFENARSSKEGS 120

Query: 121 GDA-TSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALY 180
           G    SG +AKRSKT PERTK   N +GSVQ FQEE  +SS++PSKFLILCL+AIE ALY
Sbjct: 121 GGTLPSGRVAKRSKTDPERTKEYGNAKGSVQGFQEEDSESSVAPSKFLILCLSAIENALY 180

Query: 181 HDSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKE 240
           HDS K IN+PL AD WGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKE
Sbjct: 181 HDSIKSINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKE 240

Query: 241 GLSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFL 300
           G SFSSP+LLFLVP QEKATQIRSMCKPLKALGVHTVSIH GASL HQIQGLKSCEPEFL
Sbjct: 241 GSSFSSPFLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEFL 300

Query: 301 VSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDS 360
           VSTPERLLELVAMQAIDI+GVSLLVVDGL+S S+GG L+M QSIRKSISS L+T VFSDS
Sbjct: 301 VSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSDS 360

Query: 361 FSCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGS 420
           FSCAYVP +Q LL GPI+RLSLNTSVA +SACIIQSINF+TSE+EKLSKVIQALDRANGS
Sbjct: 361 FSCAYVPFIQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEKEKLSKVIQALDRANGS 420

Query: 421 QLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVVAK 480
           Q+ PQPLKMLFILGKECNV +LAAALK KGHDIVAGALCGVPE+KNN +VD + RPVVAK
Sbjct: 421 QIRPQPLKMLFILGKECNVHDLAAALKFKGHDIVAGALCGVPEIKNNLKVDGKLRPVVAK 480

Query: 481 IDIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSL 540
            DIEQINTIDLG Y+SIFIL AFPPIDKYV+ILTGMARHT NGVLHSFI+KEEAS AGSL
Sbjct: 481 TDIEQINTIDLGTYESIFILSAFPPIDKYVEILTGMARHTNNGVLHSFISKEEASVAGSL 540

Query: 541 VEILEECGQAVPETVRNLSLTKATSQS 567
           VEILE+CGQ VP+TVRNLSLT+ATS S
Sbjct: 541 VEILEQCGQDVPKTVRNLSLTQATSHS 562

[Close]

BLAST of CmaCh15G004840 vs. ExPASy TrEMBL
Match: A0A5D3CIJ6 (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00610 PE=4 SV=1)

HSP 1 Score: 891.7 bits (2303), Expect = 1.6e-255
Identity = 471/567 (83.07%), Postives = 507/567 (89.42%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDAL RKRNKA+RKKLRSK+GDSSSVSAR+A+IIAAKKRR SGKRR CQGMCFSLP
Sbjct: 1   MAKGDDALTRKRNKAARKKLRSKSGDSSSVSARIASIIAAKKRRMSGKRRQCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120
           T DDPYNDRNG     KK+TKV+PSKGSKREFPK+ S+SAPNGT  D  RE  RSSKEGS
Sbjct: 61  TPDDPYNDRNG-----KKDTKVKPSKGSKREFPKEKSTSAPNGTLRDVGRENARSSKEGS 120

Query: 121 GDA-TSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALY 180
           G    SG +AKRSKT PERTK   N +GSVQ FQEE  +SS++PSKFLILCLNAIE ALY
Sbjct: 121 GGTLPSGRLAKRSKTDPERTKEFGNAKGSVQGFQEEDSESSVAPSKFLILCLNAIENALY 180

Query: 181 HDSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKE 240
           HDS K IN+PL AD WGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARK+KE
Sbjct: 181 HDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKDKE 240

Query: 241 GLSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFL 300
           G SFSSPYLLFLVP QEKATQIRSMCKPLKALGVHTVSIH GASL HQIQGLKSCEPEFL
Sbjct: 241 GSSFSSPYLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEFL 300

Query: 301 VSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDS 360
           VSTPERLLELVAMQAIDI+GVSLLVVDGL+S SKGG L+M QSIRKSISS L+T VFSDS
Sbjct: 301 VSTPERLLELVAMQAIDISGVSLLVVDGLESLSKGGYLDMTQSIRKSISSKLHTIVFSDS 360

Query: 361 FSCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGS 420
           FS AYVPV+Q LL GP++RLSLNTSVA +SACIIQSINF+TSE+EKLSKVIQALDRANGS
Sbjct: 361 FSRAYVPVIQSLLGGPVRRLSLNTSVACQSACIIQSINFYTSEKEKLSKVIQALDRANGS 420

Query: 421 QLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVVAK 480
            LCPQPLKMLFILGKECNV ELAAALKSKGHDIVAGALCGVPE+KNNS+VD + R VVAK
Sbjct: 421 PLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGKLRYVVAK 480

Query: 481 IDIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSL 540
             IEQI+TID+G Y+SIFIL AFPPIDKYV+ILTGMARHTVNGVLHSFI+KEEAS AGSL
Sbjct: 481 THIEQISTIDIGIYESIFILSAFPPIDKYVEILTGMARHTVNGVLHSFISKEEASVAGSL 540

Query: 541 VEILEECGQAVPETVRNLSLTKATSQS 567
           VEILE+CGQ VP+TVRNLSLT+ TS S
Sbjct: 541 VEILEQCGQDVPKTVRNLSLTQGTSHS 562

[Close]

BLAST of CmaCh15G004840 vs. ExPASy TrEMBL
Match: A0A1S3C3J7 (pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Cucumis melo OX=3656 GN=LOC103496489 PE=4 SV=1)

HSP 1 Score: 891.7 bits (2303), Expect = 1.6e-255
Identity = 471/567 (83.07%), Postives = 507/567 (89.42%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDAL RKRNKA+RKKLRSK+GDSSSVSAR+A+IIAAKKRR SGKRR CQGMCFSLP
Sbjct: 1   MAKGDDALTRKRNKAARKKLRSKSGDSSSVSARIASIIAAKKRRMSGKRRQCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120
           T DDPYNDRNG     KK+TKV+PSKGSKREFPK+ S+SAPNGT  D  RE  RSSKEGS
Sbjct: 61  TPDDPYNDRNG-----KKDTKVKPSKGSKREFPKEKSTSAPNGTLRDVGRENARSSKEGS 120

Query: 121 GDA-TSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALY 180
           G    SG +AKRSKT PERTK   N +GSVQ FQEE  +SS++PSKFLILCLNAIE ALY
Sbjct: 121 GGTLPSGRLAKRSKTDPERTKEFGNAKGSVQGFQEEDSESSVAPSKFLILCLNAIENALY 180

Query: 181 HDSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKE 240
           HDS K IN+PL AD WGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARK+KE
Sbjct: 181 HDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKDKE 240

Query: 241 GLSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFL 300
           G SFSSPYLLFLVP QEKATQIRSMCKPLKALGVHTVSIH GASL HQIQGLKSCEPEFL
Sbjct: 241 GSSFSSPYLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEFL 300

Query: 301 VSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDS 360
           VSTPERLLELVAMQAIDI+GVSLLVVDGL+S SKGG L+M QSIRKSISS L+T VFSDS
Sbjct: 301 VSTPERLLELVAMQAIDISGVSLLVVDGLESLSKGGYLDMTQSIRKSISSKLHTIVFSDS 360

Query: 361 FSCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGS 420
           FS AYVPV+Q LL GP++RLSLNTSVA +SACIIQSINF+TSE+EKLSKVIQALDRANGS
Sbjct: 361 FSRAYVPVIQSLLGGPVRRLSLNTSVACQSACIIQSINFYTSEKEKLSKVIQALDRANGS 420

Query: 421 QLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVVAK 480
            LCPQPLKMLFILGKECNV ELAAALKSKGHDIVAGALCGVPE+KNNS+VD + R VVAK
Sbjct: 421 PLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGKLRYVVAK 480

Query: 481 IDIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSL 540
             IEQI+TID+G Y+SIFIL AFPPIDKYV+ILTGMARHTVNGVLHSFI+KEEAS AGSL
Sbjct: 481 THIEQISTIDIGIYESIFILSAFPPIDKYVEILTGMARHTVNGVLHSFISKEEASVAGSL 540

Query: 541 VEILEECGQAVPETVRNLSLTKATSQS 567
           VEILE+CGQ VP+TVRNLSLT+ TS S
Sbjct: 541 VEILEQCGQDVPKTVRNLSLTQGTSHS 562

[Close]

BLAST of CmaCh15G004840 vs. NCBI nr
Match: XP_022993206.1 (ATP-dependent RNA helicase DDX42 [Cucurbita maxima])

HSP 1 Score: 1090.5 bits (2819), Expect = 0.0e+00
Identity = 566/566 (100.00%), Postives = 566/566 (100.00%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120
           TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
           GDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYH
Sbjct: 121 GDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180

Query: 181 DSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240
           DSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG
Sbjct: 181 DSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240

Query: 241 LSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV 300
           LSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV
Sbjct: 241 LSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV 300

Query: 301 STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSF 360
           STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSF
Sbjct: 301 STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSF 360

Query: 361 SCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGSQ 420
           SCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGSQ
Sbjct: 361 SCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGSQ 420

Query: 421 LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVVAKI 480
           LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVVAKI
Sbjct: 421 LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVVAKI 480

Query: 481 DIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSLV 540
           DIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSLV
Sbjct: 481 DIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSLV 540

Query: 541 EILEECGQAVPETVRNLSLTKATSQS 567
           EILEECGQAVPETVRNLSLTKATSQS
Sbjct: 541 EILEECGQAVPETVRNLSLTKATSQS 566

[Close]

BLAST of CmaCh15G004840 vs. NCBI nr
Match: XP_023550872.1 (ATP-dependent RNA helicase DDX42 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1044.6 bits (2700), Expect = 3.0e-301
Identity = 539/560 (96.25%), Postives = 551/560 (98.39%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDALARKRNK+SRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKSSRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120
           TLDDPYNDRNGNKDLDKKE+KVRPSKGSKREFPKD SSSAPNGTRGDACREKVRSSKEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKESKVRPSKGSKREFPKDKSSSAPNGTRGDACREKVRSSKEGS 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
           G+ATSGHIAKRSKTCPERTKVN NVEG VQ+FQEEGFDSSISPSKFLILCLNAIEKALYH
Sbjct: 121 GNATSGHIAKRSKTCPERTKVNVNVEGGVQNFQEEGFDSSISPSKFLILCLNAIEKALYH 180

Query: 181 DSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240
           DSFKGIN+PL ADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG
Sbjct: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240

Query: 241 LSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV 300
           LSFSSPYLLFLVPTQEKATQ+RSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV
Sbjct: 241 LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV 300

Query: 301 STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSF 360
           STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGG LEMIQSIRKSISSNL+T VFSDSF
Sbjct: 301 STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTIVFSDSF 360

Query: 361 SCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGSQ 420
           SCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQS+NF TSEEEKLSKVIQALDRAN SQ
Sbjct: 361 SCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSLNFCTSEEEKLSKVIQALDRANDSQ 420

Query: 421 LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVVAKI 480
           LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPE+KNNSEVDSRSRPVVAKI
Sbjct: 421 LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPEIKNNSEVDSRSRPVVAKI 480

Query: 481 DIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSLV 540
           D+EQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLH+FITKEEASFAGSLV
Sbjct: 481 DMEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHTFITKEEASFAGSLV 540

Query: 541 EILEECGQAVPETVRNLSLT 561
           E+LEECGQAVPETVRN SLT
Sbjct: 541 ELLEECGQAVPETVRNSSLT 560

[Close]

BLAST of CmaCh15G004840 vs. NCBI nr
Match: KAG6578780.1 (ATP-dependent RNA helicase DDX42, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1043.9 bits (2698), Expect = 5.1e-301
Identity = 546/572 (95.45%), Postives = 555/572 (97.03%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120
           TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKD SSSAPN TRGDACREKVRSSKEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSSAPNRTRGDACREKVRSSKEGS 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
           GDATSGHIAKRSKTCPERTKVNANVEG VQDFQEEGFDSSISPSKFLILCLNAIEKALYH
Sbjct: 121 GDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180

Query: 181 DSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240
           DSFKGIN+PL ADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG
Sbjct: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240

Query: 241 LSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQG------LKSC 300
           LSFSSPYLLFLVPTQEKATQ+RSMCKPLKALGVHTVSIHSGASLDHQIQG      LKSC
Sbjct: 241 LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSC 300

Query: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTF 360
           EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGG LEMIQSIRKSISSNL+T 
Sbjct: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI 360

Query: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALD 420
           VFSDSFSCAYVPVVQDLLSGPIQRLSLN SVASRSACIIQSINF TSEEEKLSKVIQALD
Sbjct: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALD 420

Query: 421 RANGSQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSR 480
           RANG QLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGAL GVPE+KNNSEVD+RSR
Sbjct: 421 RANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDNRSR 480

Query: 481 PVVAKIDIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEAS 540
           PV+AKID+EQINTIDLGNYDSIFILYAFP IDKYVQILTGMARHTVNGVLH+FITKEEAS
Sbjct: 481 PVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS 540

Query: 541 FAGSLVEILEECGQAVPETVRNLSLTKATSQS 567
           FAGSLVEILEECGQAVPETVRNLSLT+ATSQS
Sbjct: 541 FAGSLVEILEECGQAVPETVRNLSLTQATSQS 572

[Close]

BLAST of CmaCh15G004840 vs. NCBI nr
Match: XP_022938928.1 (ATP-dependent RNA helicase DDX42 [Cucurbita moschata])

HSP 1 Score: 1042.3 bits (2694), Expect = 1.5e-300
Identity = 544/566 (96.11%), Postives = 551/566 (97.35%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120
           TLDDPYNDRNGNKDLDKKETKV PSKGSKREFPKD SSSAPN TRGDACREKVRSSKEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVTPSKGSKREFPKDKSSSAPNRTRGDACREKVRSSKEGS 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
           GDATSGHIAKRSKTCPERTKVNAN EG VQDFQEEGFDSSISPSKFLILCLNAIEKALYH
Sbjct: 121 GDATSGHIAKRSKTCPERTKVNANGEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180

Query: 181 DSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240
           DSFKGIN+PL ADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG
Sbjct: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240

Query: 241 LSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV 300
           LSFSSPYLLFLVPTQEKAT +RSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV
Sbjct: 241 LSFSSPYLLFLVPTQEKATHVRSMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLV 300

Query: 301 STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSF 360
           STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGG LEMIQSIRKSISSNL+T VFSDSF
Sbjct: 301 STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTIVFSDSF 360

Query: 361 SCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGSQ 420
           SCAYVPVVQDLLSGPIQRLSLN SVASRSACIIQSINF TSEE KLSKVIQALDRANGSQ
Sbjct: 361 SCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEGKLSKVIQALDRANGSQ 420

Query: 421 LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSRPVVAKI 480
           LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGAL GVPE+KNNSEVDSR RPVVAKI
Sbjct: 421 LCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRWRPVVAKI 480

Query: 481 DIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSLV 540
           D+EQINTIDLGNYDSIFILYAFP IDKYVQILTGMARHTVNGVLH+FITKEEASFAGSLV
Sbjct: 481 DMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEASFAGSLV 540

Query: 541 EILEECGQAVPETVRNLSLTKATSQS 567
           EILEECGQAVPETVRNLSLT+ATSQS
Sbjct: 541 EILEECGQAVPETVRNLSLTQATSQS 566

[Close]

BLAST of CmaCh15G004840 vs. NCBI nr
Match: KAG7016310.1 (ATP-dependent RNA helicase DDX42 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1039.6 bits (2687), Expect = 9.6e-300
Identity = 544/572 (95.10%), Postives = 553/572 (96.68%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120
           TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKD SS APN TRGDACREKVRSSKEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGS 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
           GDATSGHIAKRSKTCPERTKVNANVEG VQDFQEEGFDSSISPSKFLILCLNAIEKALYH
Sbjct: 121 GDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180

Query: 181 DSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240
           DSFKGIN+PL ADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG
Sbjct: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240

Query: 241 LSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQG------LKSC 300
           LSFSSPYLLFLVPTQEKATQ+RSMCKPLKALGVHTVSIHSGASLDHQIQG      LKSC
Sbjct: 241 LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSC 300

Query: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTF 360
           EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGG LEMIQSIRKSISSNL+T 
Sbjct: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI 360

Query: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALD 420
           VFSDSFSCAYVPVVQDLLSGPIQRLSLN SVASRSACIIQSINF TSEEEKLSKVIQALD
Sbjct: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALD 420

Query: 421 RANGSQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSR 480
           RANG QLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGAL GVPE+KNNSEVDSRSR
Sbjct: 421 RANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRSR 480

Query: 481 PVVAKIDIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEAS 540
           PV+AKID+EQINTIDLGNYDSIFILYAFP IDKYVQILTGMARHTVNGVLH+FITKEEAS
Sbjct: 481 PVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS 540

Query: 541 FAGSLVEILEECGQAVPETVRNLSLTKATSQS 567
           FAGSLVEIL+ECGQ VPETVRNLSLT+ATSQS
Sbjct: 541 FAGSLVEILQECGQPVPETVRNLSLTQATSQS 572

[Close]

BLAST of CmaCh15G004840 vs. TAIR 10
Match: AT2G28600.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 434.9 bits (1117), Expect = 1.0e-121
Identity = 254/569 (44.64%), Postives = 358/569 (62.92%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDD + RK+NK +RKK+  KN D+++VSAR+AAIIAAKKRRKSGKR  CQGMCF+LP
Sbjct: 1   MAKGDDNVQRKKNKVTRKKMSRKN-DTATVSARIAAIIAAKKRRKSGKRSMCQGMCFTLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120
           TL+DP+N+R G  D+ KK+ K                            ++KV+S ++  
Sbjct: 61  TLEDPFNERQGKADITKKKKK----------------------------KKKVKSRED-- 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
                       K  P                  EG +    P KFL+L LN IE +   
Sbjct: 121 -----------KKPSP---------------MSIEGVEKMDGPPKFLMLNLNEIESSFRK 180

Query: 181 D--SFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEK 240
           D    +  ++ L   +WGIEFWKCYSSG DILDTSG+SST E+IAW+VS+AAD+IAR+EK
Sbjct: 181 DITYSEQHDKSLFTSSWGIEFWKCYSSGNDILDTSGMSSTVEQIAWIVSTAADAIARREK 240

Query: 241 ------EGLSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQGLK 300
                 E L  +SP+LL+LVP+Q KA+Q+RS+CK LK +G+HTVS+H GA LDHQI GLK
Sbjct: 241 DEVEEEEELLGNSPFLLYLVPSQSKASQVRSVCKALKGIGIHTVSLHQGAPLDHQISGLK 300

Query: 301 SCEPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLY 360
           S EPEF+V+TPERLLE+V ++ +DI+ VSLLV+D L S   GG L  ++SI+++ISS   
Sbjct: 301 SVEPEFIVATPERLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSIKQAISSKHQ 360

Query: 361 TFVFSDSFSCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQA 420
           T VF++SFS + +P VQ  L G + R+++N SVAS+ +CI Q+++   SEE+KL K  + 
Sbjct: 361 TIVFNNSFSASIIPAVQSFLGGSVNRVTVNESVASQGSCITQTVSVCASEEKKLQKFAKH 420

Query: 421 LDRANGSQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSR 480
           LD ++         K+++I+ KE + +++ A LK KG  +   +   +      SEV   
Sbjct: 421 LDSSSS--------KLIYIVTKEESFKKIMAILKLKGISVSTSSDSKL------SEVKKS 480

Query: 481 SRPVVAKIDIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEE 540
            +PV   ID EQ++T  + + +++ +   FP I+ Y QILT MAR + +GVLHS+IT+++
Sbjct: 481 RKPVAHLIDFEQLDTTVMRDSETVLLPDFFPSIEIYTQILTSMARESAHGVLHSYITEKD 498

Query: 541 ASF--AGSLVEILEECGQAVPETVRNLSL 560
           A+   AG LV +LE CGQ VP+  RN+ +
Sbjct: 541 AASYQAGPLVNVLENCGQNVPDRWRNMDV 498

[Close]

BLAST of CmaCh15G004840 vs. TAIR 10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 1.5e-16
Identity = 103/431 (23.90%), Postives = 187/431 (43.39%), Query Frame = 0


Query: 138 RTKVNANVEG-----SVQDFQEEGFDSSISPSKFLILCLNAIEKALYHDSFKGINEPLPA 197
           RT+ + +VEG      ++ FQ+  F  +I         L AI K        G  EP P 
Sbjct: 148 RTERDISVEGRDVPKPMKMFQDANFPDNI---------LEAIAKL-------GFTEPTPI 207

Query: 198 DAWGIEFWKCYSSGKDILDTSGLSSTDE-KIAWVVSSAADSIARKEKEGLSFSSPYLLFL 257
            A G   W     G+D++   G++ T   K    +  A   ++ + + G     P +L L
Sbjct: 208 QAQG---WPMALKGRDLI---GIAETGSGKTLAYLLPALVHVSAQPRLGQD-DGPIVLIL 267

Query: 258 VPTQEKATQIRSMCKPL-KALGVHTVSIHSGASLDHQIQGLKSCEPEFLVSTPERLLELV 317
            PT+E A QI+   +      GV +  I+ GA    QI+ L+    E +++TP RL++++
Sbjct: 268 APTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRR-GVEIVIATPGRLIDML 327

Query: 318 AMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSFSCAYVPVVQD 377
             Q  ++  V+ LV+D  D     G    I+ I   I  +  T ++S ++      + + 
Sbjct: 328 ECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQ 387

Query: 378 LLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALDR-ANGSQLCPQPLKML 437
            L  P + +  +T + +  +  I  +       EK ++++  L +  +GS       K+L
Sbjct: 388 FLRDPYKAIIGSTDLKANQS--INQVIEIVPTPEKYNRLLTLLKQLMDGS-------KIL 447

Query: 438 FILGKECNVQELAAALKSKGHDIVA--GALCGVPELKNNSEVDSRSRPVVAKIDIEQINT 497
             +  +    ++   L+  G   +A  G        +  +E  S   P++   D+     
Sbjct: 448 IFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDV-AARG 507

Query: 498 IDLGNYDSIFILYAFP-PIDKYVQILTGMARHTVNGVLHSFITKEEASFAGSLVEILEEC 557
           +D+ +   + + Y FP  ++ Y+  +    R    G+  +F T + A FA  LV+IL+E 
Sbjct: 508 LDVKDIKCV-VNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEA 543

[Close]

BLAST of CmaCh15G004840 vs. TAIR 10
Match: AT2G47330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 1.7e-15
Identity = 91/363 (25.07%), Postives = 160/363 (44.08%), Query Frame = 0


Query: 205 SGKDILD--TSGLSSTDEKIAWVVSSAADSIARKEKEGLSFSSPYLLFLVPTQEKATQIR 264
           SG+D++    +G   T   +  ++    D    +  EG     P  +   PT+E A QI 
Sbjct: 264 SGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEG-----PIGVICAPTRELAHQIF 323

Query: 265 SMCKPL-KALGVHTVSIHSGASLDHQIQGLKS-CEPEFLVSTPERLLELVAMQAIDIAGV 324
              K   KA G+   +++ G S   Q + LK+ C  E +V+TP RL++++ M+A+ +   
Sbjct: 324 LEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGC--EIVVATPGRLIDMLKMKALTMMRA 383

Query: 325 SLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSFSCAYVPVVQDLLSGPIQRLS 384
           S LV+D  D     G    ++SI   I  +  T +FS +       + +++LS PI+   
Sbjct: 384 SYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTV 443

Query: 385 LNTSVASRSACIIQSINFFTSEEEKLSKVIQALDRANGSQLCPQPLKMLFILGKECNVQE 444
               +A+    I Q +N   S+ EKL  +++ L              +L    K+  V E
Sbjct: 444 GEVGMANED--ITQVVNVIPSDAEKLPWLLEKLPGMIDEG------DVLVFASKKATVDE 503

Query: 445 LAAALKSKGHDIVA--GALCGVPELKNNSEVDSRSRPVVAKIDIEQINTIDLGNYDSIFI 504
           + A L      + A  G       ++   +  S    V+   D+     +D+ +  ++  
Sbjct: 504 IEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDV-AARGLDIKSLKTVVN 563

Query: 505 LYAFPPIDKYVQIL--TGMARHTVNGVLHSFITKEEASFAGSLVEILEECGQAVPETVRN 560
                 +D +V  +  TG A    +GV ++ +T+ EA FAG LV  L   GQ VP  + +
Sbjct: 564 YDIAKDMDMHVHRIGRTGRAGDR-DGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTD 609

[Close]

BLAST of CmaCh15G004840 vs. TAIR 10
Match: AT3G06480.1 (DEAD box RNA helicase family protein )

HSP 1 Score: 74.7 bits (182), Expect = 2.6e-13
Identity = 80/334 (23.95%), Postives = 151/334 (45.21%), Query Frame = 0


Query: 242 SFSSPYLLFLVPTQEKATQIRSMCKPL-KALGVHTVSIHSGASLDHQIQGLKSCEPEFLV 301
           S + P +L L PT+E ATQI+       ++  +    ++ GA    Q++ L+    + +V
Sbjct: 504 SRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELER-GADIVV 563

Query: 302 STPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSF 361
           +TP RL +++ M+ ID   VSLLV+D  D     G    I+ I   I     T +++ ++
Sbjct: 564 ATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATW 623

Query: 362 SCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFF--TSEEEKLSKVIQALDRANG 421
                 +  DLL  P+Q         + +  I Q +       +E +L +++++ +R  G
Sbjct: 624 PKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQER--G 683

Query: 422 SQLCPQPLKMLFILGKECNVQELAAAL-KSKGHDIVAGALCG----------VPELKNNS 481
           S++      ++F     C+ + L   L +S G    A  + G          + + ++  
Sbjct: 684 SKV------IIF-----CSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGK 743

Query: 482 EVDSRSRPVVAK-IDIEQINTIDLGNYDSIFILYAFPP-IDKYVQILTGMARHTVNGVLH 541
                +  V A+ +DI+ I  +         I Y FP  ++ YV  +    R    GV  
Sbjct: 744 SCVLIATDVAARGLDIKDIRVV---------INYDFPTGVEDYVHRIGRTGRAGATGVAF 803

Query: 542 SFITKEEASFAGSLVEILEECGQAVPETVRNLSL 560
           +F T+++  +A  L+++LE   Q VP  VR++++
Sbjct: 804 TFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIAM 814

[Close]

BLAST of CmaCh15G004840 vs. TAIR 10
Match: AT5G14610.1 (DEAD box RNA helicase family protein )

HSP 1 Score: 68.9 bits (167), Expect = 1.5e-11
Identity = 79/321 (24.61%), Postives = 146/321 (45.48%), Query Frame = 0


Query: 246 PYLLFLVPTQEKATQIR-SMCKPLKALGVHTVSIHSGASLDHQIQGLKSCEPEFLVSTPE 305
           P +L L PT+E ATQI+    K  K+  +    ++ GA    Q++ ++    + +V+TP 
Sbjct: 302 PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIER-GVDIVVATPG 361

Query: 306 RLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTFVFSDSFSCAY 365
           RL +++ M+ I +  VS LV+D  D     G    I+ I   + +   T +++ ++    
Sbjct: 362 RLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEV 421

Query: 366 VPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQAL-DRANGSQLCP 425
             +  DLL  P Q    N      +  I Q+I    +  EK S++ Q L  +  GS++  
Sbjct: 422 RKIAADLLVNPAQVNIGNVDELVANKSITQTIEVL-APMEKHSRLEQILRSQEPGSKI-- 481

Query: 426 QPLKMLFILGKECNVQELAAAL-KSKGHDIVAGALCGVPELKNNSEVDSRSR----PVVA 485
               ++F     C+ + +   L ++      A A+ G        +V ++ R    PV+ 
Sbjct: 482 ----IIF-----CSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLV 541

Query: 486 KIDIEQINTIDLGNYDSIFILYAFP-PIDKYVQILTGMARHTVNGVLHSFITKEEASFAG 545
             D+     +D+ +   + + Y FP  ++ YV  +    R    G+ ++F   ++A  A 
Sbjct: 542 ATDV-AARGLDVKDI-RVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHAS 601

Query: 546 SLVEILEECGQAVPETVRNLS 559
            L++ILE   Q VP  VR ++
Sbjct: 602 DLIKILEGANQKVPPQVREMA 607

The following BLAST results are available for this feature:

BLAST of CmaCh15G004840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5VQL1	9.5e-16	24.65	DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q8W4R3	2.1e-15	23.90	DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 P...	[more]
Q54CD6	8.0e-15	23.04	Probable ATP-dependent RNA helicase ddx5 OS=Dictyostelium discoideum OX=44689 GN...	[more]
O22907	2.3e-14	25.07	DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana OX=3702 GN=RH24 P...	[more]
Q10MH8	2.3e-14	23.76	DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of CmaCh15G004840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JVP3	0.0e+00	100.00	ATP-dependent RNA helicase DDX42 OS=Cucurbita maxima OX=3661 GN=LOC111489296 PE=...	[more]
A0A6J1FKA1	7.2e-301	96.11	ATP-dependent RNA helicase DDX42 OS=Cucurbita moschata OX=3662 GN=LOC111444991 P...	[more]
A0A0A0LQJ4	7.0e-256	82.89	DEAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G386150 PE=4 S...	[more]
A0A5D3CIJ6	1.6e-255	83.07	Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Cucumis melo var. makuwa ...	[more]
A0A1S3C3J7	1.6e-255	83.07	pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Cucumis melo OX=3656 GN=L...	[more]

BLAST of CmaCh15G004840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993206.1	0.0e+00	100.00	ATP-dependent RNA helicase DDX42 [Cucurbita maxima]	[more]
XP_023550872.1	3.0e-301	96.25	ATP-dependent RNA helicase DDX42 [Cucurbita pepo subsp. pepo]	[more]
KAG6578780.1	5.1e-301	95.45	ATP-dependent RNA helicase DDX42, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022938928.1	1.5e-300	96.11	ATP-dependent RNA helicase DDX42 [Cucurbita moschata]	[more]
KAG7016310.1	9.6e-300	95.10	ATP-dependent RNA helicase DDX42 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmaCh15G004840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28600.1	1.0e-121	44.64	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G63120.2	1.5e-16	23.90	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G47330.1	1.7e-15	25.07	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G06480.1	2.6e-13	23.95	DEAD box RNA helicase family protein	[more]
AT5G14610.1	1.5e-11	24.61	DEAD box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 81..348 e-value: 6.7E-12 score: 45.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 237..384 e-value: 7.1E-20 score: 73.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 242..376
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..137
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 1..557
None	No IPR available	PANTHER	PTHR47958:SF8	ATP-DEPENDENT RNA HELICASE DBP3 ISOFORM X1	coord: 1..557

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G004840.1	CmaCh15G004840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034220	ion transmembrane transport
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0015276	ligand-gated ion channel activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0038023	signaling receptor activity
molecular_function	GO:0003676	nucleic acid binding