CmaCh15G004010 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G004010
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A
Location	Cma_Chr15: 1797773 .. 1798033 (-)
RNA-Seq Expression	CmaCh15G004010
Synteny	CmaCh15G004010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGACGATCAGGAATTAGGTTTTCTTGCCAATTTTCTCGGCATTTTTATCTTTGCCTTGGTGATTGCTTACCATTACGTTACGGCTGATCCGAAATATGAAGGCAACTGAGATCTCGTTGATTTAGATGCTTAGATTCATCGGCAAAATGCACTATTGTTAGATGTAGACCGTTTTTTATATGTTAGGTTTTCCATTTTCTTCTATGAGAATTCTCTCCCGGCAACAACCAATGTAAGCAACTTTTTCATTATGTAA

mRNA sequence

ATGATTGACGATCAGGAATTAGGTTTTCTTGCCAATTTTCTCGGCATTTTTATCTTTGCCTTGGTGATTGCTTACCATTACATTCATCGGCAAAATGCACTATTGTTAGATGTAGACCGTTTTTTATATGTTAGGTTTTCCATTTTCTTCTATGAGAATTCTCTCCCGGCAACAACCAATGTAAGCAACTTTTTCATTATGTAA

Coding sequence (CDS)

ATGATTGACGATCAGGAATTAGGTTTTCTTGCCAATTTTCTCGGCATTTTTATCTTTGCCTTGGTGATTGCTTACCATTACATTCATCGGCAAAATGCACTATTGTTAGATGTAGACCGTTTTTTATATGTTAGGTTTTCCATTTTCTTCTATGAGAATTCTCTCCCGGCAACAACCAATGTAAGCAACTTTTTCATTATGTAA

Protein sequence

MIDDQELGFLANFLGIFIFALVIAYHYIHRQNALLLDVDRFLYVRFSIFFYENSLPATTNVSNFFIM

Homology

[Close]

BLAST of CmaCh15G004010 vs. ExPASy Swiss-Prot
Match: Q9LHK3 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Arabidopsis thaliana OX=3702 GN=OST4A PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.6e-07
Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          MIDDQ+LGF+ANFLGIFIFALVIAYHY+
Sbjct: 1  MIDDQDLGFIANFLGIFIFALVIAYHYV 28

[Close]

BLAST of CmaCh15G004010 vs. ExPASy Swiss-Prot
Match: C7J4U3 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Oryza sativa subsp. japonica OX=39947 GN=OST4A PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.5e-05
Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          M DDQ+LGF ANFLGIFIF LVIAYH++
Sbjct: 1  MFDDQDLGFFANFLGIFIFVLVIAYHFV 28

[Close]

BLAST of CmaCh15G004010 vs. ExPASy Swiss-Prot
Match: Q9SF57 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4C OS=Arabidopsis thaliana OX=3702 GN=OST4C PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 2.0e-05
Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          M DDQ+LGF ANFLGIFIF LVIAYH++
Sbjct: 1  MFDDQDLGFFANFLGIFIFILVIAYHFV 28

[Close]

BLAST of CmaCh15G004010 vs. ExPASy Swiss-Prot
Match: Q8L986 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4B OS=Arabidopsis thaliana OX=3702 GN=OST4B PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 3.4e-05
Identity = 21/28 (75.00%), Postives = 25/28 (89.29%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          M DDQ+LGF ANFLGIFIF +VIAYH++
Sbjct: 1  MFDDQDLGFFANFLGIFIFIMVIAYHFV 28

[Close]

BLAST of CmaCh15G004010 vs. ExPASy Swiss-Prot
Match: C7J0R5 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4B OS=Oryza sativa subsp. japonica OX=39947 GN=OST4B PE=3 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 3.4e-05
Identity = 21/28 (75.00%), Postives = 25/28 (89.29%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          M DDQ+LGF ANFLGIFIF LV+AYH++
Sbjct: 1  MFDDQDLGFFANFLGIFIFVLVMAYHFV 28

[Close]

BLAST of CmaCh15G004010 vs. ExPASy TrEMBL
Match: A0A1S3CJC4 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Cucumis melo OX=3656 GN=LOC103501634 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.5e-05
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          MIDDQELGFLANFLGIFIFALVIAYHY+
Sbjct: 1  MIDDQELGFLANFLGIFIFALVIAYHYV 28

[Close]

BLAST of CmaCh15G004010 vs. ExPASy TrEMBL
Match: A0A6J1JUF0 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Cucurbita maxima OX=3661 GN=LOC111489813 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.5e-05
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          MIDDQELGFLANFLGIFIFALVIAYHY+
Sbjct: 1  MIDDQELGFLANFLGIFIFALVIAYHYV 28

[Close]

BLAST of CmaCh15G004010 vs. ExPASy TrEMBL
Match: A0A6J1FGH7 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Cucurbita moschata OX=3662 GN=LOC111445281 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.5e-05
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          MIDDQELGFLANFLGIFIFALVIAYHY+
Sbjct: 1  MIDDQELGFLANFLGIFIFALVIAYHYV 28

[Close]

BLAST of CmaCh15G004010 vs. ExPASy TrEMBL
Match: A0A6J1B7U6 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Herrania umbratica OX=108875 GN=LOC110424899 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.8e-05
Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          MIDDQ+LGFLANFLGIFIFALVIAYHY+
Sbjct: 1  MIDDQQLGFLANFLGIFIFALVIAYHYV 28

[Close]

BLAST of CmaCh15G004010 vs. ExPASy TrEMBL
Match: A0A061FNH8 (Oligosaccaryltransferase OS=Theobroma cacao OX=3641 GN=TCM_042807 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.8e-05
Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          MIDDQ+LGFLANFLGIFIFALVIAYHY+
Sbjct: 42 MIDDQQLGFLANFLGIFIFALVIAYHYV 69

[Close]

BLAST of CmaCh15G004010 vs. NCBI nr
Match: XP_008463467.1 (PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A [Cucumis melo] >XP_008463468.1 PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A [Cucumis melo] >XP_022939332.1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A [Cucurbita moschata] >XP_022993977.1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A [Cucurbita maxima] >XP_023551013.1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A [Cucurbita pepo subsp. pepo] >XP_038890715.1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A [Benincasa hispida] >XP_038890716.1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A [Benincasa hispida] >XP_038890717.1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A [Benincasa hispida])

HSP 1 Score: 57.0 bits (136), Expect = 7.3e-05
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          MIDDQELGFLANFLGIFIFALVIAYHY+
Sbjct: 1  MIDDQELGFLANFLGIFIFALVIAYHYV 28

[Close]

BLAST of CmaCh15G004010 vs. NCBI nr
Match: XP_004142744.1 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A [Cucumis sativus])

HSP 1 Score: 56.6 bits (135), Expect = 9.5e-05
Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          MIDDQELGFLANFLGIF+FALVIAYHY+
Sbjct: 1  MIDDQELGFLANFLGIFVFALVIAYHYV 28

[Close]

BLAST of CmaCh15G004010 vs. NCBI nr
Match: OMO96944.1 (Oligosaccaryltransferase [Corchorus olitorius])

HSP 1 Score: 55.8 bits (133), Expect = 1.6e-04
Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          MIDDQ+LGFLANFLGIFIFALVIAYHY+
Sbjct: 70 MIDDQQLGFLANFLGIFIFALVIAYHYV 97

[Close]

BLAST of CmaCh15G004010 vs. NCBI nr
Match: EOY18192.1 (Oligosaccaryltransferase [Theobroma cacao])

HSP 1 Score: 55.8 bits (133), Expect = 1.6e-04
Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          MIDDQ+LGFLANFLGIFIFALVIAYHY+
Sbjct: 42 MIDDQQLGFLANFLGIFIFALVIAYHYV 69

[Close]

BLAST of CmaCh15G004010 vs. NCBI nr
Match: OMO58935.1 (Oligosaccaryltransferase [Corchorus capsularis])

HSP 1 Score: 55.8 bits (133), Expect = 1.6e-04
Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          MIDDQ+LGFLANFLGIFIFALVIAYHY+
Sbjct: 47 MIDDQQLGFLANFLGIFIFALVIAYHYV 74

[Close]

BLAST of CmaCh15G004010 vs. TAIR 10
Match: AT3G12587.1 (Oligosaccaryltransferase )

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-08
Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          MIDDQ+LGF+ANFLGIFIFALVIAYHY+
Sbjct: 1  MIDDQDLGFIANFLGIFIFALVIAYHYV 28

[Close]

BLAST of CmaCh15G004010 vs. TAIR 10
Match: AT5G02502.1 (Oligosaccaryltransferase )

HSP 1 Score: 48.5 bits (114), Expect = 2.4e-06
Identity = 21/28 (75.00%), Postives = 25/28 (89.29%), Query Frame = 0


Query: 1  MIDDQELGFLANFLGIFIFALVIAYHYI 29
          M DDQ+LGF ANFLGIFIF +VIAYH++
Sbjct: 1  MFDDQDLGFFANFLGIFIFIMVIAYHFV 28

The following BLAST results are available for this feature:

BLAST of CmaCh15G004010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHK3	3.6e-07	89.29	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Ara...	[more]
C7J4U3	1.5e-05	78.57	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Ory...	[more]
Q9SF57	2.0e-05	78.57	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4C OS=Ara...	[more]
Q8L986	3.4e-05	75.00	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4B OS=Ara...	[more]
C7J0R5	3.4e-05	75.00	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4B OS=Ory...	[more]

BLAST of CmaCh15G004010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CJC4	3.5e-05	96.43	dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Cuc...	[more]
A0A6J1JUF0	3.5e-05	96.43	dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Cuc...	[more]
A0A6J1FGH7	3.5e-05	96.43	dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Cuc...	[more]
A0A6J1B7U6	7.8e-05	92.86	dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Her...	[more]
A0A061FNH8	7.8e-05	92.86	Oligosaccaryltransferase OS=Theobroma cacao OX=3641 GN=TCM_042807 PE=3 SV=1	[more]

BLAST of CmaCh15G004010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463467.1	7.3e-05	96.43	PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subuni...	[more]
XP_004142744.1	9.5e-05	92.86	dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A [Cucum...	[more]
OMO96944.1	1.6e-04	92.86	Oligosaccaryltransferase [Corchorus olitorius]	[more]
EOY18192.1	1.6e-04	92.86	Oligosaccaryltransferase [Theobroma cacao]	[more]
OMO58935.1	1.6e-04	92.86	Oligosaccaryltransferase [Corchorus capsularis]	[more]

BLAST of CmaCh15G004010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12587.1	2.6e-08	89.29	Oligosaccaryltransferase	[more]
AT5G02502.1	2.4e-06	75.00	Oligosaccaryltransferase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018943	Oligosaccaryltransferase	PFAM	PF10215	Ost4	coord: 1..28 e-value: 1.1E-13 score: 50.7
IPR044165	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4, plant	PANTHER	PTHR28677	DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 4A-RELATED	coord: 1..28
IPR036330	Oligosaccharyltransferase subunit ost4p superfamily	SUPERFAMILY	103464	Oligosaccharyltransferase subunit ost4p	coord: 1..31

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G004010.1	CmaCh15G004010.1	mRNA