CmaCh15G003720 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G003720
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	tropomyosin-1, isoforms 33/34-like
Location	Cma_Chr15: 1703517 .. 1704341 (+)
RNA-Seq Expression	CmaCh15G003720
Synteny	CmaCh15G003720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCGCCAATTGCTTCTCCTTGCTCTTGTCTTCGCCGTCGTTGTCGGCATTGTCTCCGCCGCATCACCCAAGGCCGATGACCATAAACCCTCTGACGCCAAATCTGCTGAAAATAAGACTACCGCAGCTGCCGCTCCAACCCCTGCCCATGCTCACAAAGGAGCTGCTTCTTCCCCCAGGGCTGAAGCCGGTGCCCCCGAGGCTGATGTCGGTGCCCCCAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCTAAGGCTTCCAGCCCTGCCGATGGCCCTGCTTCCGGTCCTGCTTCTGGCCCTGCCGGCAATGAGGGTTCTGCCGATTCCCCTGCTGGATCCCCCGAGTCCGATGCTGATGCGTCATCTCCACCTTCCCCAAGCGGACCTGCTGCCGGACCCGTCAGCGAAGACGAAGATATGGCTGATGCACCAAGTGATTCACCCTCTGATTCTCCGCCCAGTGATGCTTCGTTCCAGAAAGTGTCAGCCGCCACCGTTGCCGGGGTTTTGGGCGTTGCTGGATTGTTTGCCTTCTAA

mRNA sequence

ATGGCCCGCCAATTGCTTCTCCTTGCTCTTGTCTTCGCCGTCGTTGTCGGCATTGTCTCCGCCGCATCACCCAAGGCCGATGACCATAAACCCTCTGACGCCAAATCTGCTGAAAATAAGACTACCGCAGCTGCCGCTCCAACCCCTGCCCATGCTCACAAAGGAGCTGCTTCTTCCCCCAGGGCTGAAGCCGGTGCCCCCGAGGCTGATGTCGGTGCCCCCAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCTAAGGCTTCCAGCCCTGCCGATGGCCCTGCTTCCGGTCCTGCTTCTGGCCCTGCCGGCAATGAGGGTTCTGCCGATTCCCCTGCTGGATCCCCCGAGTCCGATGCTGATGCGTCATCTCCACCTTCCCCAAGCGGACCTGCTGCCGGACCCGTCAGCGAAGACGAAGATATGGCTGATGCACCAAGTGATTCACCCTCTGATTCTCCGCCCAGTGATGCTTCGTTCCAGAAAGTGTCAGCCGCCACCGTTGCCGGGGTTTTGGGCGTTGCTGGATTGTTTGCCTTCTAA

Coding sequence (CDS)

ATGGCCCGCCAATTGCTTCTCCTTGCTCTTGTCTTCGCCGTCGTTGTCGGCATTGTCTCCGCCGCATCACCCAAGGCCGATGACCATAAACCCTCTGACGCCAAATCTGCTGAAAATAAGACTACCGCAGCTGCCGCTCCAACCCCTGCCCATGCTCACAAAGGAGCTGCTTCTTCCCCCAGGGCTGAAGCCGGTGCCCCCGAGGCTGATGTCGGTGCCCCCAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCTAAGGCTTCCAGCCCTGCCGATGGCCCTGCTTCCGGTCCTGCTTCTGGCCCTGCCGGCAATGAGGGTTCTGCCGATTCCCCTGCTGGATCCCCCGAGTCCGATGCTGATGCGTCATCTCCACCTTCCCCAAGCGGACCTGCTGCCGGACCCGTCAGCGAAGACGAAGATATGGCTGATGCACCAAGTGATTCACCCTCTGATTCTCCGCCCAGTGATGCTTCGTTCCAGAAAGTGTCAGCCGCCACCGTTGCCGGGGTTTTGGGCGTTGCTGGATTGTTTGCCTTCTAA

Protein sequence

MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSPRAEAGAPEADVGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPKASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAPSDSPSDSPPSDASFQKVSAATVAGVLGVAGLFAF

Homology

[Close]

BLAST of CmaCh15G003720 vs. ExPASy TrEMBL
Match: A0A6J1JWR2 (tropomyosin-1, isoforms 33/34-like OS=Cucurbita maxima OX=3661 GN=LOC111489030 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 5.5e-113
Identity = 260/274 (94.89%), Postives = 260/274 (94.89%), Query Frame = 0


Query: 1   MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSP 60
           MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSP
Sbjct: 1   MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSP 60

Query: 61  RAEAGAPEADVGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADA 120
           R              ADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADA
Sbjct: 61  R--------------ADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADA 120

Query: 121 GAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPK 180
           GAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPK
Sbjct: 121 GAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPK 180

Query: 181 ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP 240
           ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP
Sbjct: 181 ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP 240

Query: 241 SDSPSDSPPSDASFQKVSAATVAGVLGVAGLFAF 275
           SDSPSDSPPSDASFQKVSAATVAGVLGVAGLFAF
Sbjct: 241 SDSPSDSPPSDASFQKVSAATVAGVLGVAGLFAF 260

[Close]

BLAST of CmaCh15G003720 vs. ExPASy TrEMBL
Match: A0A6J1FDY2 (skin secretory protein xP2-like OS=Cucurbita moschata OX=3662 GN=LOC111444655 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.2e-88
Identity = 217/274 (79.20%), Postives = 224/274 (81.75%), Query Frame = 0


Query: 1   MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSP 60
           MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKT AAAAP+PAHAHKGAASS 
Sbjct: 76  MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTAAAAAPSPAHAHKGAASS- 135

Query: 61  RAEAGAPEADVGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADA 120
                                                           PKADAGAPKADA
Sbjct: 136 ------------------------------------------------PKADAGAPKADA 195

Query: 121 GAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPK 180
           GAPEADAGAPKADAGAP+ADAGAP+ADAGAPKADAGAP+ADAGAPKADAGAPEA+AGAPK
Sbjct: 196 GAPEADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPEAEAGAPK 255

Query: 181 ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP 240
           ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP
Sbjct: 256 ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP 300

Query: 241 SDSPSDSPPSDASFQKVSAATVAGVLGVAGLFAF 275
           SDSP+DSPPSDASFQKVSAATVAG+LGVAGLFAF
Sbjct: 316 SDSPADSPPSDASFQKVSAATVAGLLGVAGLFAF 300

[Close]

BLAST of CmaCh15G003720 vs. ExPASy TrEMBL
Match: A0A6J1H5Y9 (skin secretory protein xP2-like OS=Cucurbita moschata OX=3662 GN=LOC111460771 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.5e-41
Identity = 150/268 (55.97%), Postives = 176/268 (65.67%), Query Frame = 0


Query: 1   MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSP 60
           MARQLLLLAL+FA V+GI SA                                       
Sbjct: 80  MARQLLLLALLFAAVLGIASA--------------------------------------- 139

Query: 61  RAEAGAPEADVGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADA 120
            A+A AP+AD  A K  A AP   + A    A APK  A AP+A+A AP+ADAGAPKADA
Sbjct: 140 -AKAPAPDADSAAAKTPAAAPSNSSSA----ADAPKGAASAPKAEADAPEADAGAPKADA 199

Query: 121 GAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPK 180
           GAP+A+AGAP+ADAGAPKA+AGAPEADAGAPKA+AGAP+ADA APKA+AGAPEADAGAP 
Sbjct: 200 GAPKAEAGAPEADAGAPKAEAGAPEADAGAPKAEAGAPEADAEAPKAEAGAPEADAGAPS 259

Query: 181 ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP 240
           A +PA  PASGPAS         +SP+ +PESDA+ASSPPSPSGPA GP SE E+ ADAP
Sbjct: 260 ADAPAGSPASGPASD--------ESPSAAPESDAEASSPPSPSGPAEGPASE-EEAADAP 291

Query: 241 SDSPSDSPPSDASFQKVSAATVAGVLGV 269
           +    D+  S +SF K+SA TVA + GV
Sbjct: 320 A---PDASGSGSSFLKMSATTVATIAGV 291

[Close]

BLAST of CmaCh15G003720 vs. ExPASy TrEMBL
Match: A0A6J1JUB2 (tropomyosin-1, isoforms 33/34-like OS=Cucurbita maxima OX=3661 GN=LOC111487570 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.4e-31
Identity = 135/268 (50.37%), Postives = 161/268 (60.07%), Query Frame = 0


Query: 1   MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSP 60
           MARQLLL AL+FAV++GI SAA                                      
Sbjct: 1   MARQLLLHALLFAVLLGIASAAK------------------------------------- 60

Query: 61  RAEAGAPEADVGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADA 120
                       AP AD     AD+ A K  A AP   + A    A  PK  A +PKA+A
Sbjct: 61  ------------APPAD-----ADSAAAKTPAAAPSNSSSA----ADEPKGAASSPKAEA 120

Query: 121 GAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPK 180
            APEA+AGAPKADAGAPKA+AGAP+A+AGAPKA+AGAPKA+AGAPKADAGAP+A+AGAP 
Sbjct: 121 DAPEAEAGAPKADAGAPKAEAGAPKAEAGAPKAEAGAPKAEAGAPKADAGAPKAEAGAPN 180

Query: 181 ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP 240
           A +PA  PASGPAS         +SP+ +PESDA+ASSPPSPSG A GP SE E+ ADAP
Sbjct: 181 ADAPAGSPASGPASD--------ESPSAAPESDAEASSPPSPSGTAGGPASE-EEAADAP 198

Query: 241 SDSPSDSPPSDASFQKVSAATVAGVLGV 269
           +    D+  S +SF K+SA TVA + GV
Sbjct: 241 A---PDASASGSSFLKMSATTVATIAGV 198

[Close]

BLAST of CmaCh15G003720 vs. ExPASy TrEMBL
Match: A0A5D3CDS4 (Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold249G00550 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 9.9e-14
Identity = 80/144 (55.56%), Postives = 92/144 (63.89%), Query Frame = 0


Query: 138 KADAGAP-EADAGAPKADAGAPKADAGAPKADAGAPEADAGAPKASSPADGPASGPASGP 197
           K  A AP +A A A  A      + AGAPK  A AP A  GAP+A SP    A GPAS P
Sbjct: 14  KTPAAAPSKAPAAAVDAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV---AGGPASSP 73

Query: 198 AGNEGS-----ADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAPSDSPSDSP-PS 257
           AG+E S     A +PAG+P SDA+ SSPPSP+GPAAGP S  +  ADAP+DSP+DSP PS
Sbjct: 74  AGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPAS--DAAADAPADSPADSPAPS 133

Query: 258 DASFQKVSAATVAGVLGVAGLFAF 275
             S  KVS A VAG+ GV GLF F
Sbjct: 134 GGSLVKVSVAAVAGISGVVGLFVF 152

[Close]

BLAST of CmaCh15G003720 vs. NCBI nr
Match: XP_022992810.1 (tropomyosin-1, isoforms 33/34-like [Cucurbita maxima])

HSP 1 Score: 417.2 bits (1071), Expect = 1.1e-112
Identity = 260/274 (94.89%), Postives = 260/274 (94.89%), Query Frame = 0


Query: 1   MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSP 60
           MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSP
Sbjct: 1   MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSP 60

Query: 61  RAEAGAPEADVGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADA 120
           R              ADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADA
Sbjct: 61  R--------------ADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADA 120

Query: 121 GAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPK 180
           GAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPK
Sbjct: 121 GAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPK 180

Query: 181 ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP 240
           ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP
Sbjct: 181 ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP 240

Query: 241 SDSPSDSPPSDASFQKVSAATVAGVLGVAGLFAF 275
           SDSPSDSPPSDASFQKVSAATVAGVLGVAGLFAF
Sbjct: 241 SDSPSDSPPSDASFQKVSAATVAGVLGVAGLFAF 260

[Close]

BLAST of CmaCh15G003720 vs. NCBI nr
Match: XP_023549524.1 (skin secretory protein xP2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.1 bits (1037), Expect = 9.9e-109
Identity = 256/305 (83.93%), Postives = 267/305 (87.54%), Query Frame = 0


Query: 1   MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSP 60
           MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKT AAAAPTPAHAHKGAASSP
Sbjct: 1   MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTAAAAAPTPAHAHKGAASSP 60

Query: 61  RAEAGAPEADVGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADA 120
           +A+AGAP+AD GAP+ADAGAP+ADAGAPKADAGAPKADAGAP+ADAGAPKADAGAPKADA
Sbjct: 61  KADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPKADAGAPKADAGAPKADA 120

Query: 121 GAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPK 180
           GAP+ADAGAPKADAGAPKADAGAP+ADAGAPKADAGAPKADAGAPKADAGAP+ADAGAPK
Sbjct: 121 GAPKADAGAPKADAGAPKADAGAPKADAGAPKADAGAPKADAGAPKADAGAPKADAGAPK 180

Query: 181 ASS-------------------------------PADGPASGPASGPAGNEGSADSPAGS 240
           A +                                A  PA GPASGPAGNEGSADSPAGS
Sbjct: 181 ADAGAPKADAGAPKADAGAPKADAGAPEADAGAPKASSPADGPASGPAGNEGSADSPAGS 240

Query: 241 PESDADASSPPSPSGPAAGPVSEDEDMADAPSDSPSDSPPSDASFQKVSAATVAGVLGVA 275
           PESDADASSPPSPSGPAAGPVSEDEDMADAPSDSP+DSPPSDASFQKVSAATVAGVLGVA
Sbjct: 241 PESDADASSPPSPSGPAAGPVSEDEDMADAPSDSPADSPPSDASFQKVSAATVAGVLGVA 300

[Close]

BLAST of CmaCh15G003720 vs. NCBI nr
Match: XP_022938389.1 (skin secretory protein xP2-like [Cucurbita moschata])

HSP 1 Score: 336.3 bits (861), Expect = 2.5e-88
Identity = 217/274 (79.20%), Postives = 224/274 (81.75%), Query Frame = 0


Query: 1   MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSP 60
           MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKT AAAAP+PAHAHKGAASS 
Sbjct: 76  MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTAAAAAPSPAHAHKGAASS- 135

Query: 61  RAEAGAPEADVGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADA 120
                                                           PKADAGAPKADA
Sbjct: 136 ------------------------------------------------PKADAGAPKADA 195

Query: 121 GAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPK 180
           GAPEADAGAPKADAGAP+ADAGAP+ADAGAPKADAGAP+ADAGAPKADAGAPEA+AGAPK
Sbjct: 196 GAPEADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPEAEAGAPK 255

Query: 181 ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP 240
           ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP
Sbjct: 256 ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP 300

Query: 241 SDSPSDSPPSDASFQKVSAATVAGVLGVAGLFAF 275
           SDSP+DSPPSDASFQKVSAATVAG+LGVAGLFAF
Sbjct: 316 SDSPADSPPSDASFQKVSAATVAGLLGVAGLFAF 300

[Close]

BLAST of CmaCh15G003720 vs. NCBI nr
Match: KAG6578683.1 (hypothetical protein SDJN03_23131, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332.0 bits (850), Expect = 4.8e-87
Identity = 219/274 (79.93%), Postives = 227/274 (82.85%), Query Frame = 0


Query: 1   MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSP 60
           MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKT AAAAP+PAHAHKGAASSP
Sbjct: 76  MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTAAAAAPSPAHAHKGAASSP 135

Query: 61  RAEAGAPEADVGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADA 120
           +AEAGAPE                            A+AGAP+ADAGAPKADAGAPKADA
Sbjct: 136 KAEAGAPE----------------------------AEAGAPKADAGAPKADAGAPKADA 195

Query: 121 GAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPK 180
           GAPEADAGAPKADAGAP+ADAGAPE              A+AGAPKADAGAPEA+AGAPK
Sbjct: 196 GAPEADAGAPKADAGAPEADAGAPE--------------AEAGAPKADAGAPEAEAGAPK 255

Query: 181 ASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP 240
           ASSPAD    GPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP
Sbjct: 256 ASSPAD----GPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAP 303

Query: 241 SDSPSDSPPSDASFQKVSAATVAGVLGVAGLFAF 275
           SDSP+DSPPSDASFQKVSAATVAGVLGVAGLFAF
Sbjct: 316 SDSPADSPPSDASFQKVSAATVAGVLGVAGLFAF 303

[Close]

BLAST of CmaCh15G003720 vs. NCBI nr
Match: XP_023543865.1 (predicted GPI-anchored protein 58 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239.6 bits (610), Expect = 3.2e-59
Identity = 187/297 (62.96%), Postives = 219/297 (73.74%), Query Frame = 0


Query: 1   MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAK----SAENKTTAAAAP--------- 60
           MARQLLLLAL+FA V+GI SAA   A D   + AK    +  N ++AA AP         
Sbjct: 1   MARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAPSNSSSAADAPKADAGAPEA 60

Query: 61  ------TPAHAHKGAASSPRAEAGAPEADVGAPK-------ADAGAPEADAGAPKADAGA 120
                   A A K  A +P+AEAGAPEAD GAPK       A+AGAPEA+AGAP+ADAGA
Sbjct: 61  DAGAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPEAEAGAPEAEAGAPEADAGA 120

Query: 121 PKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKAD 180
           P+ADAGAPEADAGAPKADAGAPKA+AGAPEADAGAPKA+AGAP+A+AGAPEA+AGAP+AD
Sbjct: 121 PEADAGAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPEAEAGAPEAEAGAPEAD 180

Query: 181 AGAPKADAGAPKADAGAPEADAGAPKASS---PADGPASGPASGPAGNEGSADSPAGSPE 240
           AGAP+ADAGAP+ADAGAPEA+AGAPKA +    AD PA  PASGPA +E    S + +PE
Sbjct: 181 AGAPEADAGAPEADAGAPEAEAGAPKADAGAPNADAPAGSPASGPASDE----STSAAPE 240

Query: 241 SDADASSPPSPSGPAAGPVSEDEDMADAPSDSPSDSPPSDASFQKVSAATVAGVLGV 269
           SDA+ASSPPSPSGPA GP SE E+ ADAP+    D+  S +SF K+SA TVA + GV
Sbjct: 241 SDAEASSPPSPSGPAEGPGSE-EEAADAPA---PDASASGSSFLKMSATTVATIAGV 289

The following BLAST results are available for this feature:

BLAST of CmaCh15G003720 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh15G003720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JWR2	5.5e-113	94.89	tropomyosin-1, isoforms 33/34-like OS=Cucurbita maxima OX=3661 GN=LOC111489030 P...	[more]
A0A6J1FDY2	1.2e-88	79.20	skin secretory protein xP2-like OS=Cucurbita moschata OX=3662 GN=LOC111444655 PE...	[more]
A0A6J1H5Y9	2.5e-41	55.97	skin secretory protein xP2-like OS=Cucurbita moschata OX=3662 GN=LOC111460771 PE...	[more]
A0A6J1JUB2	1.4e-31	50.37	tropomyosin-1, isoforms 33/34-like OS=Cucurbita maxima OX=3661 GN=LOC111487570 P...	[more]
A0A5D3CDS4	9.9e-14	55.56	Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of CmaCh15G003720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992810.1	1.1e-112	94.89	tropomyosin-1, isoforms 33/34-like [Cucurbita maxima]	[more]
XP_023549524.1	9.9e-109	83.93	skin secretory protein xP2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938389.1	2.5e-88	79.20	skin secretory protein xP2-like [Cucurbita moschata]	[more]
KAG6578683.1	4.8e-87	79.93	hypothetical protein SDJN03_23131, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023543865.1	3.2e-59	62.96	predicted GPI-anchored protein 58 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh15G003720 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G003720.1	CmaCh15G003720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane