CmaCh15G003570 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G003570
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	cyclin-dependent protein kinase inhibitor SMR6-like
Location	Cma_Chr15: 1641430 .. 1641744 (+)
RNA-Seq Expression	CmaCh15G003570
Synteny	CmaCh15G003570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTCTCAAAAAAGTCGCAAATCGACGGCGGATTAGAAGCAGAAGGGAAAAAATGGGTAATCGCCGGGCTGCCGGCGAGGTCATCGTTGAAGCCGATTAGCACAAAATCTAGAGCAAAAGACGGCGAGGACGACTGCGAGAAGTCGCGTTCAACAACGCCGACGGCGAAAGAAGCGAGAATACCGGAGAAACTGAGTTGCCCGGCGGCGCCGAGAAAGCGTAGGTCGCTAAAATCAAGCTCTAATCAAAATCATGGTAGGGAGTTCTTTAATCCTCCTGATTTAGAATCTGTGTTTAAGATCCGAGTTTAG

mRNA sequence

ATGGGATTCTCAAAAAAGTCGCAAATCGACGGCGGATTAGAAGCAGAAGGGAAAAAATGGGTAATCGCCGGGCTGCCGGCGAGGTCATCGTTGAAGCCGATTAGCACAAAATCTAGAGCAAAAGACGGCGAGGACGACTGCGAGAAGTCGCGTTCAACAACGCCGACGGCGAAAGAAGCGAGAATACCGGAGAAACTGAGTTGCCCGGCGGCGCCGAGAAAGCGTAGGTCGCTAAAATCAAGCTCTAATCAAAATCATGGTAGGGAGTTCTTTAATCCTCCTGATTTAGAATCTGTGTTTAAGATCCGAGTTTAG

Coding sequence (CDS)

ATGGGATTCTCAAAAAAGTCGCAAATCGACGGCGGATTAGAAGCAGAAGGGAAAAAATGGGTAATCGCCGGGCTGCCGGCGAGGTCATCGTTGAAGCCGATTAGCACAAAATCTAGAGCAAAAGACGGCGAGGACGACTGCGAGAAGTCGCGTTCAACAACGCCGACGGCGAAAGAAGCGAGAATACCGGAGAAACTGAGTTGCCCGGCGGCGCCGAGAAAGCGTAGGTCGCTAAAATCAAGCTCTAATCAAAATCATGGTAGGGAGTTCTTTAATCCTCCTGATTTAGAATCTGTGTTTAAGATCCGAGTTTAG

Protein sequence

MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV

Homology

[Close]

BLAST of CmaCh15G003570 vs. ExPASy Swiss-Prot
Match: Q29Q81 (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.0e-24
Identity = 68/110 (61.82%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRA-----KDGEDDC---EKSRS 60
           MGFSKKSQ +GGLE++GKKWVIAG+  R+SLKP+ TK RA      + E+DC   E+  S
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query: 61  TTPTAKEARIPEKLSCPAAPRKRR-SLKSSSNQNHGREFFNPP-DLESVF 101
           TTPTAKE +IPE L CP APRKRR +LK  SN    REFF PP DLE+VF
Sbjct: 61  TTPTAKETKIPELLECPPAPRKRRPALKCRSNV--VREFFTPPSDLETVF 108

[Close]

BLAST of CmaCh15G003570 vs. ExPASy Swiss-Prot
Match: Q9SAD3 (Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 GN=SMR8 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.2e-14
Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 1   MGFSKK--SQIDGGL--EAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPT 60
           MG+S K   Q+DG +    +GKKWVIAG+P+RS LK I+        E + +    TTPT
Sbjct: 1   MGYSGKPHHQLDGEIRESTDGKKWVIAGIPSRSPLKQINLSPGVTVTETEEQDQCPTTPT 60

Query: 61  AKEARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVF 101
           A   RIP    CPAAP+KR+     S     R++F+PPDLE+VF
Sbjct: 61  AVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

[Close]

BLAST of CmaCh15G003570 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 4.4e-12
Identity = 52/108 (48.15%), Postives = 63/108 (58.33%), Query Frame = 0


Query: 1   MGFSKKS--QIDGGLE--AEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPT 60
           MGFS K+  Q D       EGKK VI G+   S++KPIS  S A    +D E    TTPT
Sbjct: 1   MGFSGKTYHQFDRKFSETTEGKKCVITGISLHSTVKPISLSSSAVSNTED-EDLCPTTPT 60

Query: 61  AKEARIPEKLSCPAAPRKRR-SLKSSSNQNHGREFFNPPDLESVFKIR 104
           A   RIP  + CP AP+KR+ +LK S      REFF+PPDLE+VF  R
Sbjct: 61  ADSVRIPTVIPCPPAPKKRKLTLKVSYGP---REFFSPPDLETVFIYR 104

[Close]

BLAST of CmaCh15G003570 vs. ExPASy Swiss-Prot
Match: Q9LVX6 (Cyclin-dependent protein kinase inhibitor SMR7 OS=Arabidopsis thaliana OX=3702 GN=SMR7 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.4e-10
Identity = 43/100 (43.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MG SKKSQ+   L+ +GKK++ A    R+SLKP+ TK    + E   E     TPTA+ A
Sbjct: 1   MGISKKSQVSRELDTDGKKFIFAKTSIRASLKPVKTKLIKPERES--EDGICITPTARGA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVF 101
           + PE   CPAAPRKR  +    N      F  P D E VF
Sbjct: 61  KTPE---CPAAPRKRPPVLKCQNNIRIEYFVPPSDFELVF 95

[Close]

BLAST of CmaCh15G003570 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 7.6e-04
Identity = 22/47 (46.81%), Postives = 31/47 (65.96%), Query Frame = 0


Query: 54  TPTAKEARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVF 101
           TP AK++RIPE L+CP AP+K+R  K+   +     FF PP++E  F
Sbjct: 56  TPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]

BLAST of CmaCh15G003570 vs. ExPASy TrEMBL
Match: A0A6J1JVL3 (cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita maxima OX=3661 GN=LOC111489273 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.3e-50
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA
Sbjct: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV
Sbjct: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of CmaCh15G003570 vs. ExPASy TrEMBL
Match: A0A6J1FHD8 (cyclin-dependent protein kinase inhibitor SMR6 OS=Cucurbita moschata OX=3662 GN=LOC111445393 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.2e-45
Identity = 97/104 (93.27%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MGFSKKSQIDGG E EGKKWVIAGLPARSSLKPI+TK RAKDGEDD EKS STTPTAKEA
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKPRAKDGEDDGEKSHSTTPTAKEA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           RIPEKL CPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV
Sbjct: 61  RIPEKLICPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of CmaCh15G003570 vs. ExPASy TrEMBL
Match: A0A5D3BY33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00180 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.4e-37
Identity = 85/104 (81.73%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MGFSKKSQID G EAE KKWVIAGL ARSSLKPI+TKS+ K+GE+D EK    TPT KEA
Sbjct: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEK----TPTGKEA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           RIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVFK+RV
Sbjct: 61  RIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

[Close]

BLAST of CmaCh15G003570 vs. ExPASy TrEMBL
Match: A0A1S3C883 (uncharacterized protein LOC103498100 OS=Cucumis melo OX=3656 GN=LOC103498100 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.4e-37
Identity = 85/104 (81.73%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MGFSKKSQID G EAE KKWVIAGL ARSSLKPI+TKS+ K+GE+D EK    TPT KEA
Sbjct: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEK----TPTGKEA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           RIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVFK+RV
Sbjct: 61  RIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

[Close]

BLAST of CmaCh15G003570 vs. ExPASy TrEMBL
Match: A0A0A0KUE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523070 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.7e-36
Identity = 84/104 (80.77%), Postives = 89/104 (85.58%), Query Frame = 0


Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MGFSKKSQID G E E KKWVIAGL ARSSLKPI+TKS+ K+GEDD +K    TPT KEA
Sbjct: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDK----TPTGKEA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           RIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVFK+RV
Sbjct: 61  RIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

[Close]

BLAST of CmaCh15G003570 vs. NCBI nr
Match: XP_022993176.1 (cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita maxima])

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-49
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA
Sbjct: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV
Sbjct: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of CmaCh15G003570 vs. NCBI nr
Match: KAG7016206.1 (Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.8 bits (499), Expect = 9.1e-47
Identity = 100/104 (96.15%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MGFSKKSQIDGG E EGKKWVIAGLPARSSLKPI+TKSRAKDGEDD EKSRSTTPTAKEA
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKSRAKDGEDDGEKSRSTTPTAKEA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV
Sbjct: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of CmaCh15G003570 vs. NCBI nr
Match: KAG6578666.1 (Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.8 bits (499), Expect = 9.1e-47
Identity = 100/104 (96.15%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MGFSKKSQIDGG E EGKKWVIAGLPARSSLKPI+TKSRAKDGEDD EKSRSTTPTAKEA
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKSRAKDGEDDGEKSRSTTPTAKEA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV
Sbjct: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of CmaCh15G003570 vs. NCBI nr
Match: XP_023550994.1 (cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.7 bits (496), Expect = 2.0e-46
Identity = 99/104 (95.19%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MGFSKKSQIDGG E EGKKWVIAGLPARSSLKPI+TKSRAKDG+DD EKSRSTTPTAKEA
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKSRAKDGDDDGEKSRSTTPTAKEA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV
Sbjct: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of CmaCh15G003570 vs. NCBI nr
Match: XP_022939509.1 (cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita moschata])

HSP 1 Score: 190.7 bits (483), Expect = 6.5e-45
Identity = 97/104 (93.27%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MGFSKKSQIDGG E EGKKWVIAGLPARSSLKPI+TK RAKDGEDD EKS STTPTAKEA
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKPRAKDGEDDGEKSHSTTPTAKEA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           RIPEKL CPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV
Sbjct: 61  RIPEKLICPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of CmaCh15G003570 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-25
Identity = 68/110 (61.82%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRA-----KDGEDDC---EKSRS 60
           MGFSKKSQ +GGLE++GKKWVIAG+  R+SLKP+ TK RA      + E+DC   E+  S
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query: 61  TTPTAKEARIPEKLSCPAAPRKRR-SLKSSSNQNHGREFFNPP-DLESVF 101
           TTPTAKE +IPE L CP APRKRR +LK  SN    REFF PP DLE+VF
Sbjct: 61  TTPTAKETKIPELLECPPAPRKRRPALKCRSNV--VREFFTPPSDLETVF 108

[Close]

BLAST of CmaCh15G003570 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 4.4e-15
Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 1   MGFSKK--SQIDGGL--EAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPT 60
           MG+S K   Q+DG +    +GKKWVIAG+P+RS LK I+        E + +    TTPT
Sbjct: 1   MGYSGKPHHQLDGEIRESTDGKKWVIAGIPSRSPLKQINLSPGVTVTETEEQDQCPTTPT 60

Query: 61  AKEARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVF 101
           A   RIP    CPAAP+KR+     S     R++F+PPDLE+VF
Sbjct: 61  AVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

[Close]

BLAST of CmaCh15G003570 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 3.1e-13
Identity = 52/108 (48.15%), Postives = 63/108 (58.33%), Query Frame = 0


Query: 1   MGFSKKS--QIDGGLE--AEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPT 60
           MGFS K+  Q D       EGKK VI G+   S++KPIS  S A    +D E    TTPT
Sbjct: 1   MGFSGKTYHQFDRKFSETTEGKKCVITGISLHSTVKPISLSSSAVSNTED-EDLCPTTPT 60

Query: 61  AKEARIPEKLSCPAAPRKRR-SLKSSSNQNHGREFFNPPDLESVFKIR 104
           A   RIP  + CP AP+KR+ +LK S      REFF+PPDLE+VF  R
Sbjct: 61  ADSVRIPTVIPCPPAPKKRKLTLKVSYGP---REFFSPPDLETVFIYR 104

[Close]

BLAST of CmaCh15G003570 vs. TAIR 10
Match: AT3G27630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40460.1); Has 36 Blast hits to 36 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 1.7e-11
Identity = 43/100 (43.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MG SKKSQ+   L+ +GKK++ A    R+SLKP+ TK    + E   E     TPTA+ A
Sbjct: 1   MGISKKSQVSRELDTDGKKFIFAKTSIRASLKPVKTKLIKPERES--EDGICITPTARGA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVF 101
           + PE   CPAAPRKR  +    N      F  P D E VF
Sbjct: 61  KTPE---CPAAPRKRPPVLKCQNNIRIEYFVPPSDFELVF 95

[Close]

BLAST of CmaCh15G003570 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 5.4e-05
Identity = 22/47 (46.81%), Postives = 31/47 (65.96%), Query Frame = 0


Query: 54  TPTAKEARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVF 101
           TP AK++RIPE L+CP AP+K+R  K+   +     FF PP++E  F
Sbjct: 56  TPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

The following BLAST results are available for this feature:

BLAST of CmaCh15G003570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q29Q81	3.0e-24	61.82	Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SAD3	6.2e-14	45.19	Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q1G3Y4	4.4e-12	48.15	Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LVX6	2.4e-10	43.00	Cyclin-dependent protein kinase inhibitor SMR7 OS=Arabidopsis thaliana OX=3702 G...	[more]
F4IWB3	7.6e-04	46.81	Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmaCh15G003570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JVL3	7.3e-50	100.00	cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1FHD8	3.2e-45	93.27	cyclin-dependent protein kinase inhibitor SMR6 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3BY33	5.4e-37	81.73	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C883	5.4e-37	81.73	uncharacterized protein LOC103498100 OS=Cucumis melo OX=3656 GN=LOC103498100 PE=...	[more]
A0A0A0KUE2	2.7e-36	80.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523070 PE=4 SV=1	[more]

BLAST of CmaCh15G003570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993176.1	1.5e-49	100.00	cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita maxima]	[more]
KAG7016206.1	9.1e-47	96.15	Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma ...	[more]
KAG6578666.1	9.1e-47	96.15	Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma ...	[more]
XP_023550994.1	2.0e-46	95.19	cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita pepo subsp. pepo]	[more]
XP_022939509.1	6.5e-45	93.27	cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita moschata]	[more]

BLAST of CmaCh15G003570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40460.1	2.1e-25	61.82	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G10690.1	4.4e-15	45.19	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G60783.1	3.1e-13	48.15	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G27630.1	1.7e-11	43.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G20898.1	5.4e-05	46.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..55
None	No IPR available	PANTHER	PTHR33142:SF40	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR6-RELATED	coord: 1..103
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G003570.1	CmaCh15G003570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045839	negative regulation of mitotic nuclear division
biological_process	GO:0016310	phosphorylation
biological_process	GO:0032875	regulation of DNA endoreduplication
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016301	kinase activity