CmaCh15G003330 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G003330
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RNA exonuclease 4
Location	Cma_Chr15: 1535048 .. 1537474 (-)
RNA-Seq Expression	CmaCh15G003330
Synteny	CmaCh15G003330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTTCCTTTGCACCCACTTTCTGGCATCAAAGTAAGAGTTTTTGTTTGATCAGACAATGGATCATTCAGCTGAGACATCTAGGTTTGATCTCCTTCTCCCTGTCTTTGTGTATTTGTTTGTGGCATTGTTTCTAAGTTTTTGACACTAAAAATGGTTGTCAAACAGGCACAAGTGCGCTGCTTGCTTCAGGCAATTCAACAAGATTGAGCATTTGGTTGATCATATGAGGACCTCTTTCCACTCACCTCATGAACCCACTTGTGCCGTTTGCAAGAAACACTGTCGTTCTCTTGATTCTCTTAGAGAACATCTCATTGGTATGTTAGTCGTTTCTACCGATAAAGTCGTAAGCTTTTTAAAGTTCAATAAAAGTTCGTATATAAGACCTATAGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTTCTTATAAGAGTGTGGAAACCTCTCTCTAGCAGATGCGTTTTAAAACCGTTAGGTTGACGACGATATGTAACGAACTAAAACGGACAATATCGACTAGCAGTGGCCTTGGGCTATTACAAATGGTATTAGAGCCTGTGTGCCAGCGAGAACGCTGGCCCCCAAGGGAGATGGATTATGAAATCCCATATCGGTTGGAGAGGGAAACAAAACATTTCTTGTAAAGGTGTGGAAACCTCTCCCTAGAAAACGCATTTTAAAATCGTGAGGCTGACGACGATACGTAACATGCCAAAGCGGACAATATCTCCTAACAGTGGGCTTGAGTTGTTACAAATGGTATTAGAGTTAGACACTGTGCTAGTGAGGAAGCTAGCACCCAGAGAGGGTGGATTGTGAGATCCTACATCGGTTGGAGAGGGAAACGAAGCATTCATTGTAAGGGTGTGGAAACTTCTCTCTAGTAGATGCATTTTAAAATCGTGAAGCTAACGACGATACATAACGAGTCAAAGTGGACAATATTTGTCAGCAGTAGACTTGAACTATTACATATACTATAATGGGTTATGATAAATTTAATTATATCGATACGATCATGTTGTTATCAGGGCCGCTGCCGAAGCAAGAATGCAAAAACGTCTTCGACATGCGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGGCTCCACCAAGAAAGATGCCAATTCTCGTGTGTTAATTCTGTATGAACCCTCAACTATCAGCTAATTAAACAGCATGAAATTTAGTTCTTTACCTTCAAAATCTTGAATCTTCCATTCTTTTTTGGCTGTTTTGATCAGGGGCTTCTTGCTCGTTTGGCCAACTTGGGAATTCGCGATGGTTCAACCGCCATCGACGGTGGAAGAACTCGAGGCTCCGGTCCCGTGGCGTTAGCTTGCAAATATGTAGGTGGCGGTGATGGGTCGCTGGATGTCTGTGCCAAGGTCTGCCTTATTGATGAGAGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCCACAATACCCGTTACAAATTATAGGTCAGTTATTTTTCGTGGCGAATCATTTAAAATTTAGAGACCAAATAAACCTAAAGTTTTAGAATTGGAGTATAAATTTTTTATAATTTAACCGCTTTGATATGTAAAAATAAAATTAGGTATGAAACGACGGGCATTCGTCCCGAACATGTTCGAGATGCAATGCCACTAAAGCAAGTTCAAAAGAAAATTCAAGACATCCTCTACAATGGAGGTGAGAAAGCTAGGGTTCTTGTGGGTCACTGTGTGGAAGACGATCTCAAACGTCTACAAATCGGATATCCATCTATCATGATAAGGTAAATTCTTCAAACAAAAATTAAATTTATCGTGACCCATCAACTCAAAATTTTAAATTTCTTATCGAAATTTGAAGTTCTAACCTTATATCAACTTTTTTACGAAACCCTTTTAAGATCTTGACCTAAAAGTGAATAGTTCTAAAGATTGCTTGTGTTTCATGCACTGATCCACAGGGACATAGCAAATTATCCGCCATTGATGAAGACAAGCAAGCTCTGCAATTCACTCAAGTATCTAGCTCAAGTATATCTTGGGCAAGTACCATTTTCAATTCTAGTACTCGTTAGTATACTTCATTCAAAAACGAACACGATTTTCAAAAAATAACATACGAAATGATTATCGAGCAAGGTTTATGTAATAAACGAATAATTGGTATTTGTTATTGTAGATTTGAGATTCAAAATGGAGTACAAGATCCTTATGAAGAATGTGTGGGTGGCATGAGATTGTACAAGAGAATGAGATCACAAGTTCATAGGATAGAGCATCATCCAATGGCTTCTGACCCACAAAACAAAAACAACTTTGCAGCTTGGAGGGAAAGTGAGCTTGAGAGGATGAGCCCAGAACAGATGTTGGAGATTTCTAGGTCTGATTATTACTGTTGGTGCATGGATTTGAGGATTTGA

mRNA sequence

AGCTTCCTTTGCACCCACTTTCTGGCATCAAAGTAAGAGTTTTTGTTTGATCAGACAATGGATCATTCAGCTGAGACATCTAGGCACAAGTGCGCTGCTTGCTTCAGGCAATTCAACAAGATTGAGCATTTGGTTGATCATATGAGGACCTCTTTCCACTCACCTCATGAACCCACTTGTGCCGTTTGCAAGAAACACTGTCGTTCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCGCTGCCGAAGCAAGAATGCAAAAACGTCTTCGACATGCGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGGCTCCACCAAGAAAGATGCCAATTCTCGTGTGTTAATTCTGGGCTTCTTGCTCGTTTGGCCAACTTGGGAATTCGCGATGGTTCAACCGCCATCGACGGTGGAAGAACTCGAGGCTCCGGTCCCGTGGCGTTAGCTTGCAAATATGTAGGTGGCGGTGATGGGTCGCTGGATGTCTGTGCCAAGGTCTGCCTTATTGATGAGAGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCCACAATACCCGTTACAAATTATAGGTATGAAACGACGGGCATTCGTCCCGAACATGTTCGAGATGCAATGCCACTAAAGCAAGTTCAAAAGAAAATTCAAGACATCCTCTACAATGGAGGTGAGAAAGCTAGGGTTCTTGTGGGTCACTGTGTGGAAGACGATCTCAAACGTCTACAAATCGGATATCCATCTATCATGATAAGGGACATAGCAAATTATCCGCCATTGATGAAGACAAGCAAGCTCTGCAATTCACTCAAATTTGAGATTCAAAATGGAGTACAAGATCCTTATGAAGAATGTGTGGGTGGCATGAGATTGTACAAGAGAATGAGATCACAAGTTCATAGGATAGAGCATCATCCAATGGCTTCTGACCCACAAAACAAAAACAACTTTGCAGCTTGGAGGGAAAGTGAGCTTGAGAGGATGAGCCCAGAACAGATGTTGGAGATTTCTAGGTCTGATTATTACTGTTGGTGCATGGATTTGAGGATTTGA

Coding sequence (CDS)

ATGGATCATTCAGCTGAGACATCTAGGCACAAGTGCGCTGCTTGCTTCAGGCAATTCAACAAGATTGAGCATTTGGTTGATCATATGAGGACCTCTTTCCACTCACCTCATGAACCCACTTGTGCCGTTTGCAAGAAACACTGTCGTTCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCGCTGCCGAAGCAAGAATGCAAAAACGTCTTCGACATGCGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGGCTCCACCAAGAAAGATGCCAATTCTCGTGTGTTAATTCTGGGCTTCTTGCTCGTTTGGCCAACTTGGGAATTCGCGATGGTTCAACCGCCATCGACGGTGGAAGAACTCGAGGCTCCGGTCCCGTGGCGTTAGCTTGCAAATATGTAGGTGGCGGTGATGGGTCGCTGGATGTCTGTGCCAAGGTCTGCCTTATTGATGAGAGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCCACAATACCCGTTACAAATTATAGGTATGAAACGACGGGCATTCGTCCCGAACATGTTCGAGATGCAATGCCACTAAAGCAAGTTCAAAAGAAAATTCAAGACATCCTCTACAATGGAGGTGAGAAAGCTAGGGTTCTTGTGGGTCACTGTGTGGAAGACGATCTCAAACGTCTACAAATCGGATATCCATCTATCATGATAAGGGACATAGCAAATTATCCGCCATTGATGAAGACAAGCAAGCTCTGCAATTCACTCAAATTTGAGATTCAAAATGGAGTACAAGATCCTTATGAAGAATGTGTGGGTGGCATGAGATTGTACAAGAGAATGAGATCACAAGTTCATAGGATAGAGCATCATCCAATGGCTTCTGACCCACAAAACAAAAACAACTTTGCAGCTTGGAGGGAAAGTGAGCTTGAGAGGATGAGCCCAGAACAGATGTTGGAGATTTCTAGGTCTGATTATTACTGTTGGTGCATGGATTTGAGGATTTGA

Protein sequence

MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGPLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAIDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYETTGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIANYPPLMKTSKLCNSLKFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPMASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI

Homology

[Close]

BLAST of CmaCh15G003330 vs. ExPASy Swiss-Prot
Match: Q91560 (RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 7.1e-19
Identity = 58/156 (37.18%), Postives = 82/156 (52.56%), Query Frame = 0


Query: 132 VALACKYVG-GGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYETTGIRPEHVRD 191
           VA+ C+ VG G DG   + A+V +++     ++  YVKPT  VT+YR   +GIRPE V+ 
Sbjct: 235 VAMDCEMVGVGMDGEESILARVSIVNLFGKCVYDKYVKPTERVTDYRTAVSGIRPEDVKK 294

Query: 192 AMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIANYPPLMKTSK 251
             P K VQK++ +IL     + R LVGH V +DLK L + +P   IRD   Y P  +  K
Sbjct: 295 GEPFKVVQKEVSEIL-----RGRTLVGHAVHNDLKILFLDHPKKAIRDTQKYKPFKQKVK 354

Query: 252 --------LCNS-LKFEIQNGVQDPYEECVGGMRLY 278
                   LC   L  ++Q G     ++    MRLY
Sbjct: 355 SGRPSLKLLCEKILNVKVQTGEHCSVQDAQAAMRLY 385

[Close]

BLAST of CmaCh15G003330 vs. ExPASy Swiss-Prot
Match: Q08237 (RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=REX4 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.0e-18
Identity = 55/184 (29.89%), Postives = 98/184 (53.26%), Query Frame = 0


Query: 119 TAIDGGRTRGSGP-VALACKYVG-GGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNY 178
           T I+  +++  G  +A+ C++VG G +G     A++ +++   +V+   +VKP   V  +
Sbjct: 108 TRINSNKSKEIGKYIAMDCEFVGVGPEGKESALARISIVNYFGHVVLDEFVKPREKVVEW 167

Query: 179 RYETTGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMI 238
           R   +GI+PEH+++A+  K+ QKK  DIL     + R+LVGH ++ DL+ L + +P  ++
Sbjct: 168 RTWVSGIKPEHMKNAITFKEAQKKTADIL-----EGRILVGHALKHDLEALMLSHPKSLL 227

Query: 239 RDIANYPPLMK---------TSKLCNS-LKFEIQNGVQDPYEECVGGMRLYKRMRSQVHR 291
           RD + + P  K           KL    LK  IQ G     E+    M LYK+ +++  +
Sbjct: 228 RDTSRHLPFRKLYAKGKTPSLKKLTREVLKISIQEGEHSSVEDARATMLLYKKEKTEFEK 286

[Close]

BLAST of CmaCh15G003330 vs. ExPASy Swiss-Prot
Match: Q9GZR2 (RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-17
Identity = 62/206 (30.10%), Postives = 102/206 (49.51%), Query Frame = 0


Query: 112 LGIRDGSTAID-------GGRTRGSGPVALACKYVG-GGDGSLDVCAKVCLIDESENVIF 171
           LG  +GS ++        GG TR    +AL C+ VG G  G   + A+V ++++    ++
Sbjct: 220 LGQSEGSVSLSLVKEQAFGGLTRA---LALDCEMVGVGPKGEESMAARVSIVNQYGKCVY 279

Query: 172 YSYVKPTIPVTNYRYETTGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDD 231
             YVKPT PVT+YR   +GIRPE+++    L+ VQK++ ++L     K R+LVGH + +D
Sbjct: 280 DKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEML-----KGRILVGHALHND 339

Query: 232 LKRLQIGYPSIMIRDIANYPPLMKTSKLCNS---------LKFEIQNGVQDPYEECVGGM 291
           LK L + +P   IRD   Y P     K             L  ++Q       ++    M
Sbjct: 340 LKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAM 399

Query: 292 RLYKRMRSQVHRI--EHHPMASDPQN 299
           RLY  ++ +   +  +  P+ + P +
Sbjct: 400 RLYVMVKKEWESMARDRRPLLTAPDH 417

[Close]

BLAST of CmaCh15G003330 vs. ExPASy Swiss-Prot
Match: Q6CMT3 (RNA exonuclease 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=REX4 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.3e-17
Identity = 57/179 (31.84%), Postives = 95/179 (53.07%), Query Frame = 0


Query: 125 RTRGSGP-VALACKYVG-GGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYETTG 184
           RT G G  V++ C++VG G DG     A+V +++   NV+   +V+P  PVT++R   +G
Sbjct: 112 RTNGVGKYVSMDCEFVGVGPDGKDSALARVSIVNYYGNVVLDLFVRPKEPVTDWRTWVSG 171

Query: 185 IRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIANY 244
           I+P H+ +A+  +  QK++ ++L     K R+LVGH V  DL  L + +P  MIRD + +
Sbjct: 172 IKPHHMANAVTQEDCQKQVSNVL-----KGRILVGHSVHHDLTALMLSHPRRMIRDTSRH 231

Query: 245 ------------PPLMKTSKLCNSLKFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEH 290
                       P L K +K    L+ +IQ+G     E+    M LYK  + +  ++ +
Sbjct: 232 MPFRQKYSEGKTPSLKKLTK--EILQLDIQDGEHSSIEDARATMLLYKSDKLEFEKLHN 283

[Close]

BLAST of CmaCh15G003330 vs. ExPASy Swiss-Prot
Match: Q4WHF8 (RNA exonuclease 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=rex4 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 8.6e-17
Identity = 57/169 (33.73%), Postives = 90/169 (53.25%), Query Frame = 0


Query: 132 VALACKYVGGGDG--SLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYETTGIRPEHVR 191
           VA+ C+ VG G    +    A+V +++ +   ++ SYV+P   +T++R   +GI P+H+ 
Sbjct: 117 VAMDCEMVGVGPNPDNDSALARVSIVNFNGEQVYDSYVRPKEMITDWRTHVSGISPKHMA 176

Query: 192 DAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIANYPPLMKTS 251
           +A  L+QVQK + +IL       R+LVGH V +DL  L +G+P   IRD + +PP  K +
Sbjct: 177 EARSLEQVQKDVAEIL-----DGRILVGHAVSNDLDALLLGHPKRDIRDTSKHPPYRKIA 236

Query: 252 -------KLCNS--LKFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEH 290
                  K+  S  L   IQ+G     E+    M LY+R +    R EH
Sbjct: 237 GGGSPRLKILASEFLGLNIQDGAHSSVEDAKATMLLYRRDKEAFER-EH 279

[Close]

BLAST of CmaCh15G003330 vs. ExPASy TrEMBL
Match: A0A6J1JZ30 (RNA exonuclease 4 OS=Cucurbita maxima OX=3661 GN=LOC111489566 PE=3 SV=1)

HSP 1 Score: 698.7 bits (1802), Expect = 1.1e-197
Identity = 335/343 (97.67%), Postives = 335/343 (97.67%), Query Frame = 0


Query: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60
           MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG
Sbjct: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120
           PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA
Sbjct: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120

Query: 121 IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYET 180
           IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYET
Sbjct: 121 IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYET 180

Query: 181 TGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 240
           TGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA
Sbjct: 181 TGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 240

Query: 241 NYPPLMKTSKLCNSLK--------FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM 300
           NYPPLMKTSKLCNSLK        FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM
Sbjct: 241 NYPPLMKTSKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM 300

Query: 301 ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 336
           ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI
Sbjct: 301 ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 343

[Close]

BLAST of CmaCh15G003330 vs. ExPASy TrEMBL
Match: A0A6J1FEK0 (RNA exonuclease 4 OS=Cucurbita moschata OX=3662 GN=LOC111444794 PE=3 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 6.3e-196
Identity = 332/343 (96.79%), Postives = 333/343 (97.08%), Query Frame = 0


Query: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60
           MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG
Sbjct: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120
           PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA
Sbjct: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120

Query: 121 IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYET 180
           IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKP IPVTNYRYE 
Sbjct: 121 IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKPIIPVTNYRYEM 180

Query: 181 TGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 240
           TGIRPEH+RDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA
Sbjct: 181 TGIRPEHLRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 240

Query: 241 NYPPLMKTSKLCNSLK--------FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM 300
           NYPPLMKTSKLCNSLK        FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM
Sbjct: 241 NYPPLMKTSKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM 300

Query: 301 ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 336
           ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI
Sbjct: 301 ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 343

[Close]

BLAST of CmaCh15G003330 vs. ExPASy TrEMBL
Match: A0A6J1BXL4 (RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 4.6e-170
Identity = 290/344 (84.30%), Postives = 310/344 (90.12%), Query Frame = 0


Query: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60
           MDH  ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEP CA+CKKHCRSLDSLREHLIG
Sbjct: 1   MDHPLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPICAICKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120
           PLPKQECKN+F  RGCKFCLAILDS YSQRLHQERCQFS VNSGLLARLANLGIRD S  
Sbjct: 61  PLPKQECKNIFTTRGCKFCLAILDSPYSQRLHQERCQFSGVNSGLLARLANLGIRDASIV 120

Query: 121 IDGGRTRGSGPVALACKYV-GGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYE 180
           +DGGR R +G VALACKYV GGGDGSLD+CAKVCLIDE+ENVIFYSYVKP IPVTNYR+E
Sbjct: 121 VDGGRARATGTVALACKYVGGGGDGSLDICAKVCLIDETENVIFYSYVKPIIPVTNYRFE 180

Query: 181 TTGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDI 240
           TTGIRPEH+RDAMPLKQVQKKIQ+ILYNGGEKARVLVGH VEDDLKRLQIGYP  +IRD 
Sbjct: 181 TTGIRPEHLRDAMPLKQVQKKIQEILYNGGEKARVLVGHGVEDDLKRLQIGYP--IIRDT 240

Query: 241 ANYPPLMKTSKLCNSLK--------FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHP 300
           ANYPPLMKTSKLCNSLK        F+IQNG+QDPYE+CV  MRLYKRMRSQVH+IE +P
Sbjct: 241 ANYPPLMKTSKLCNSLKYLAQVYLGFDIQNGIQDPYEDCVASMRLYKRMRSQVHKIEDYP 300

Query: 301 MASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 336
           MASDPQNKNNF  WR++ELERM+PE ML+ISRSDYYCWC+DLRI
Sbjct: 301 MASDPQNKNNFGIWRQNELERMTPEHMLDISRSDYYCWCLDLRI 342

[Close]

BLAST of CmaCh15G003330 vs. ExPASy TrEMBL
Match: A0A6J1BZE0 (RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 1.9e-168
Identity = 290/347 (83.57%), Postives = 310/347 (89.34%), Query Frame = 0


Query: 1   MDHSAETS---RHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREH 60
           MDH  ETS   RHKCAACFRQFNKIEHLVDHMRTSFHS HEP CA+CKKHCRSLDSLREH
Sbjct: 1   MDHPLETSRSVRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPICAICKKHCRSLDSLREH 60

Query: 61  LIGPLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDG 120
           LIGPLPKQECKN+F  RGCKFCLAILDS YSQRLHQERCQFS VNSGLLARLANLGIRD 
Sbjct: 61  LIGPLPKQECKNIFTTRGCKFCLAILDSPYSQRLHQERCQFSGVNSGLLARLANLGIRDA 120

Query: 121 STAIDGGRTRGSGPVALACKYV-GGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNY 180
           S  +DGGR R +G VALACKYV GGGDGSLD+CAKVCLIDE+ENVIFYSYVKP IPVTNY
Sbjct: 121 SIVVDGGRARATGTVALACKYVGGGGDGSLDICAKVCLIDETENVIFYSYVKPIIPVTNY 180

Query: 181 RYETTGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMI 240
           R+ETTGIRPEH+RDAMPLKQVQKKIQ+ILYNGGEKARVLVGH VEDDLKRLQIGYP  +I
Sbjct: 181 RFETTGIRPEHLRDAMPLKQVQKKIQEILYNGGEKARVLVGHGVEDDLKRLQIGYP--II 240

Query: 241 RDIANYPPLMKTSKLCNSLK--------FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIE 300
           RD ANYPPLMKTSKLCNSLK        F+IQNG+QDPYE+CV  MRLYKRMRSQVH+IE
Sbjct: 241 RDTANYPPLMKTSKLCNSLKYLAQVYLGFDIQNGIQDPYEDCVASMRLYKRMRSQVHKIE 300

Query: 301 HHPMASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 336
            +PMASDPQNKNNF  WR++ELERM+PE ML+ISRSDYYCWC+DLRI
Sbjct: 301 DYPMASDPQNKNNFGIWRQNELERMTPEHMLDISRSDYYCWCLDLRI 345

[Close]

BLAST of CmaCh15G003330 vs. ExPASy TrEMBL
Match: A0A1S3C947 (RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103498183 PE=3 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.6e-151
Identity = 264/352 (75.00%), Postives = 296/352 (84.09%), Query Frame = 0


Query: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60
           MDHS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIG
Sbjct: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120
           PLPKQEC+N+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST 
Sbjct: 61  PLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTI 120

Query: 121 IDGGRTRGSGPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYE 180
           ID GRTRGSG +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKP IPVTNYRYE
Sbjct: 121 IDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE 180

Query: 181 TTGIRPEHVRDAMPLKQVQKKIQDILYNGGE----------KARVLVGHCVEDDLKRLQI 240
            TG+RPEH+RDAMPLKQVQKKIQ+ L NG +          KAR+LVGH +++ L  LQI
Sbjct: 181 FTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTRKARILVGHGLQEYLTSLQI 240

Query: 241 GYPSIMIRDIANYPPLMKTSKLCNSLK--------FEIQNGVQ-DPYEECVGGMRLYKRM 300
            YPSIMIRD A YPPLMKTSKL NSL         + ++NG + + YEECV  MRLY +M
Sbjct: 241 DYPSIMIRDTAKYPPLMKTSKLSNSLHYLTQTYLGYNMENGKKSEGYEECVATMRLYLKM 300

Query: 301 RSQVHRIEHHPMASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMD 333
           +SQVH+ E +P+ASDP NK NFA W++ ELE+M+P+Q+L+ISRSDYYCWC+D
Sbjct: 301 KSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLD 352

[Close]

BLAST of CmaCh15G003330 vs. NCBI nr
Match: XP_022993635.1 (RNA exonuclease 4-like [Cucurbita maxima])

HSP 1 Score: 698.7 bits (1802), Expect = 2.4e-197
Identity = 335/343 (97.67%), Postives = 335/343 (97.67%), Query Frame = 0


Query: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60
           MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG
Sbjct: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120
           PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA
Sbjct: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120

Query: 121 IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYET 180
           IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYET
Sbjct: 121 IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYET 180

Query: 181 TGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 240
           TGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA
Sbjct: 181 TGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 240

Query: 241 NYPPLMKTSKLCNSLK--------FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM 300
           NYPPLMKTSKLCNSLK        FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM
Sbjct: 241 NYPPLMKTSKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM 300

Query: 301 ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 336
           ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI
Sbjct: 301 ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 343

[Close]

BLAST of CmaCh15G003330 vs. NCBI nr
Match: XP_022938612.1 (RNA exonuclease 4-like [Cucurbita moschata])

HSP 1 Score: 693.0 bits (1787), Expect = 1.3e-195
Identity = 332/343 (96.79%), Postives = 333/343 (97.08%), Query Frame = 0


Query: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60
           MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG
Sbjct: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120
           PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA
Sbjct: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120

Query: 121 IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYET 180
           IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKP IPVTNYRYE 
Sbjct: 121 IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKPIIPVTNYRYEM 180

Query: 181 TGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 240
           TGIRPEH+RDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA
Sbjct: 181 TGIRPEHLRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 240

Query: 241 NYPPLMKTSKLCNSLK--------FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM 300
           NYPPLMKTSKLCNSLK        FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM
Sbjct: 241 NYPPLMKTSKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM 300

Query: 301 ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 336
           ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI
Sbjct: 301 ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 343

[Close]

BLAST of CmaCh15G003330 vs. NCBI nr
Match: XP_023551468.1 (RNA exonuclease 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 678.7 bits (1750), Expect = 2.5e-191
Identity = 325/343 (94.75%), Postives = 332/343 (96.79%), Query Frame = 0


Query: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60
           MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG
Sbjct: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120
           PLPKQECKNVFDMRGCKFCLAILDSSYSQR+HQERCQFSCVNSGLLARLA+LGIRDGSTA
Sbjct: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRVHQERCQFSCVNSGLLARLASLGIRDGSTA 120

Query: 121 IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYET 180
           IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESEN++FYSYVKP IPVTNYRYET
Sbjct: 121 IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENIVFYSYVKPIIPVTNYRYET 180

Query: 181 TGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 240
           TGIRPEH+RDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA
Sbjct: 181 TGIRPEHLRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 240

Query: 241 NYPPLMKTSKLCNSLK--------FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM 300
           NYPPLMKTSKLCNSLK        FEIQNGVQD Y +CVGGMRLYKRMRSQVHRIEHHPM
Sbjct: 241 NYPPLMKTSKLCNSLKYLAQVYLGFEIQNGVQDLY-DCVGGMRLYKRMRSQVHRIEHHPM 300

Query: 301 ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 336
           ASDPQNKNNFAAWRE+ELERMSPEQMLEISRSDYYCWCMDLRI
Sbjct: 301 ASDPQNKNNFAAWRENELERMSPEQMLEISRSDYYCWCMDLRI 342

[Close]

BLAST of CmaCh15G003330 vs. NCBI nr
Match: KAG6578645.1 (hypothetical protein SDJN03_23093, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 647.5 bits (1669), Expect = 6.3e-182
Identity = 312/335 (93.13%), Postives = 314/335 (93.73%), Query Frame = 0


Query: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60
           MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG
Sbjct: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120
           PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA
Sbjct: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120

Query: 121 IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYET 180
           IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKP IPVTNYRYE 
Sbjct: 121 IDGGRTRGSGPVALACKYVGGGDGSLDVCAKVCLIDESENVIFYSYVKPIIPVTNYRYEM 180

Query: 181 TGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 240
           TGIRPEH+RDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIR   
Sbjct: 181 TGIRPEHLRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIR--- 240

Query: 241 NYPPLMKTSKLCNSLKFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPMASDPQNKN 300
                           FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPMASDPQNKN
Sbjct: 241 ----------------FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPMASDPQNKN 300

Query: 301 NFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 336
           NFAAWRE+ELERMSPEQMLEISRSDYYCWCMDLRI
Sbjct: 301 NFAAWRENELERMSPEQMLEISRSDYYCWCMDLRI 316

[Close]

BLAST of CmaCh15G003330 vs. NCBI nr
Match: XP_011656270.1 (RNA exonuclease 4 [Cucumis sativus])

HSP 1 Score: 625.5 bits (1612), Expect = 2.6e-175
Identity = 296/344 (86.05%), Postives = 314/344 (91.28%), Query Frame = 0


Query: 1   MDHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIG 60
           MDHS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIG
Sbjct: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTA 120
           PLPKQECKN+F  RGCKFCLAI DSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST 
Sbjct: 61  PLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTV 120

Query: 121 IDGGRTRGSGPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYE 180
           ID GRTRGSG +ALACKYVGGG DGS+D+CAKVCLIDE ENVIFYSYVKP   VTNYRYE
Sbjct: 121 IDSGRTRGSGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYE 180

Query: 181 TTGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDI 240
           TTGIRPEH+RDAMP+KQVQKKIQ+ILYNGGEKAR+LVG CVEDDLKRLQIGYPS MIRD 
Sbjct: 181 TTGIRPEHIRDAMPVKQVQKKIQEILYNGGEKARILVGDCVEDDLKRLQIGYPSFMIRDT 240

Query: 241 ANYPPLMKTSKLCNSLK--------FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHP 300
           ANYPPLMK+SKLCNSLK        F++QNG+QDPYEEC+  MRLYKRMRSQVHR E++P
Sbjct: 241 ANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYP 300

Query: 301 MASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 336
           MASDPQNKNNFA WRE+EL+RMSPEQMLEISRSDYYCWCMDLRI
Sbjct: 301 MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLRI 344

[Close]

BLAST of CmaCh15G003330 vs. TAIR 10
Match: AT3G27970.1 (Exonuclease family protein )

HSP 1 Score: 476.5 bits (1225), Expect = 1.8e-134
Identity = 227/347 (65.42%), Postives = 278/347 (80.12%), Query Frame = 0


Query: 4   SAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGPLP 63
           S+ET R+KCAAC+RQFNK+EHLV+HM+ S+HS HEPTC VCKKHCRS +SLREHLIGPLP
Sbjct: 9   SSETLRNKCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLREHLIGPLP 68

Query: 64  KQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAIDG 123
           KQECKN+F +RGC+FC+ IL+S  S+R+HQERCQFS VNSGL  R+A LG+RD    ID 
Sbjct: 69  KQECKNIFSLRGCRFCMTILESPNSRRIHQERCQFSSVNSGLTTRMAALGLRD-KAMIDY 128

Query: 124 GRTRGSGPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYETTG 183
             +R    VAL+CK VGGG DGSLD+CA+VC+ DES+NVIF++YVKP++ VT+YRYETTG
Sbjct: 129 TSSRSPRVVALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVTSYRYETTG 188

Query: 184 IRPEHVRDAMPLKQVQKKIQDILYNG---------GEKARVLVGHCVEDDLKRLQIGYPS 243
           IRPE++RDAMPLKQVQ+KIQ+ L NG         G KAR+LVGH ++ DL RLQ+ YPS
Sbjct: 189 IRPENLRDAMPLKQVQRKIQEFLCNGEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPS 248

Query: 244 IMIRDIANYPPLMKTSKLCNSLK--------FEIQNGVQDPYEECVGGMRLYKRMRSQVH 303
            MIRD A YPPLMKTSKL NSLK        +++  G+QDPYE+CV  MRLY RMR Q H
Sbjct: 249 SMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDVHFGIQDPYEDCVATMRLYTRMRYQKH 308

Query: 304 RIEHHPMASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMD 333
           +IE +P+A+D QN++N  AWR+SE ERMSP++ML ISRSDYYCWC+D
Sbjct: 309 KIEAYPLAADAQNRSNQVAWRQSEAERMSPDEMLSISRSDYYCWCLD 354

[Close]

BLAST of CmaCh15G003330 vs. TAIR 10
Match: AT5G40310.1 (Exonuclease family protein )

HSP 1 Score: 460.3 bits (1183), Expect = 1.3e-129
Identity = 220/345 (63.77%), Postives = 269/345 (77.97%), Query Frame = 0


Query: 6   ETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGPLPKQ 65
           +T R+KC  C+RQFNK EHLV+HMR S+HS HEPTC +C KHCRS DSLREHLIGPLPKQ
Sbjct: 2   DTCRNKCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPKQ 61

Query: 66  ECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAIDGGR 125
           ECKN+F +RGC+FCL IL+S  ++R+HQERCQ S V SGL+ R+A LG+R+ ST ID   
Sbjct: 62  ECKNIFSIRGCRFCLTILESPNARRIHQERCQLSNVTSGLMIRMAALGLRNNST-IDYTS 121

Query: 126 TRGSGPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYETTGIR 185
           +R    VAL+CK VGGG DGSLD+CA+VC+ DESENV+F++YVKPTIPVTNYRYE TGIR
Sbjct: 122 SRSPRVVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIR 181

Query: 186 PEHVRDAMPLKQVQKKIQDILYNG---------GEKARVLVGHCVEDDLKRLQIGYPSIM 245
           PE++RDAM LK  Q+K+Q+ L NG           KAR+LVGH +++ L  LQ+ Y S M
Sbjct: 182 PENLRDAMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSM 241

Query: 246 IRDIANYPPLMKTSKLCNSLK--------FEIQNGVQDPYEECVGGMRLYKRMRSQVHRI 305
           IRD A YPPLMK+SKL NSLK        ++I  G+QDPYE+CV  MRLY RMR Q HR 
Sbjct: 242 IRDTAEYPPLMKSSKLSNSLKYLTQAYLGYDIHVGIQDPYEDCVATMRLYTRMRYQKHRA 301

Query: 306 EHHPMASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMD 333
           E +P+ASD QN NNFAAWR++ELERMSPE++L++SRSDYYCWC+D
Sbjct: 302 EAYPLASDTQNHNNFAAWRQNELERMSPEELLDLSRSDYYCWCLD 345

[Close]

BLAST of CmaCh15G003330 vs. TAIR 10
Match: AT2G48100.1 (Exonuclease family protein )

HSP 1 Score: 280.0 bits (715), Expect = 2.5e-75
Identity = 142/338 (42.01%), Postives = 210/338 (62.13%), Query Frame = 0


Query: 9   RHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGP--LPKQE 68
           RH+C AC++ FN+ EHLV+HM+ S+HS H+P C VC KHC+S +S+REHL  P  L K  
Sbjct: 16  RHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGN 75

Query: 69  CKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAIDGGRT 128
           CK +F  RGC  CL I + +++   H+ +C  S         L     R+ S+++ G R 
Sbjct: 76  CKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP-----LGTSTQRNPSSSLAGSRL 135

Query: 129 RGSGPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYETTGIRP 188
           +    +AL C+ VGGG DG++D CA VCL+D+ ENVIF ++V+P +PVT+YR+E TG+  
Sbjct: 136 KA---MALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTK 195

Query: 189 EHVRDAMPLKQVQKKIQDIL---YNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIANY 248
           E ++D MPL+ V++++   L    N G    +LVGH +  D+  L++ YPS ++RD A Y
Sbjct: 196 EDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTAKY 255

Query: 249 PPLMKTSKLCNSLK--------FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPMAS 308
            PLMKT+ +  SLK        ++IQ G  + YE+CV  MRLYKRMR Q H      + S
Sbjct: 256 VPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------VCS 315

Query: 309 DPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMD 333
                N   + ++S+LE+M+ E++ + S S+Y CWC+D
Sbjct: 316 GKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLD 339

[Close]

BLAST of CmaCh15G003330 vs. TAIR 10
Match: AT2G48100.2 (Exonuclease family protein )

HSP 1 Score: 280.0 bits (715), Expect = 2.5e-75
Identity = 142/338 (42.01%), Postives = 210/338 (62.13%), Query Frame = 0


Query: 9   RHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGP--LPKQE 68
           RH+C AC++ FN+ EHLV+HM+ S+HS H+P C VC KHC+S +S+REHL  P  L K  
Sbjct: 16  RHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGN 75

Query: 69  CKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAIDGGRT 128
           CK +F  RGC  CL I + +++   H+ +C  S         L     R+ S+++ G R 
Sbjct: 76  CKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP-----LGTSTQRNPSSSLAGSRL 135

Query: 129 RGSGPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYETTGIRP 188
           +    +AL C+ VGGG DG++D CA VCL+D+ ENVIF ++V+P +PVT+YR+E TG+  
Sbjct: 136 KA---MALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTK 195

Query: 189 EHVRDAMPLKQVQKKIQDIL---YNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIANY 248
           E ++D MPL+ V++++   L    N G    +LVGH +  D+  L++ YPS ++RD A Y
Sbjct: 196 EDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTAKY 255

Query: 249 PPLMKTSKLCNSLK--------FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPMAS 308
            PLMKT+ +  SLK        ++IQ G  + YE+CV  MRLYKRMR Q H      + S
Sbjct: 256 VPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------VCS 315

Query: 309 DPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMD 333
                N   + ++S+LE+M+ E++ + S S+Y CWC+D
Sbjct: 316 GKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLD 339

[Close]

BLAST of CmaCh15G003330 vs. TAIR 10
Match: AT2G48100.3 (Exonuclease family protein )

HSP 1 Score: 280.0 bits (715), Expect = 2.5e-75
Identity = 142/338 (42.01%), Postives = 210/338 (62.13%), Query Frame = 0


Query: 9   RHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGP--LPKQE 68
           RH+C AC++ FN+ EHLV+HM+ S+HS H+P C VC KHC+S +S+REHL  P  L K  
Sbjct: 16  RHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGN 75

Query: 69  CKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAIDGGRT 128
           CK +F  RGC  CL I + +++   H+ +C  S         L     R+ S+++ G R 
Sbjct: 76  CKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP-----LGTSTQRNPSSSLAGSRL 135

Query: 129 RGSGPVALACKYVGGG-DGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYETTGIRP 188
           +    +AL C+ VGGG DG++D CA VCL+D+ ENVIF ++V+P +PVT+YR+E TG+  
Sbjct: 136 KA---MALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTK 195

Query: 189 EHVRDAMPLKQVQKKIQDIL---YNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIANY 248
           E ++D MPL+ V++++   L    N G    +LVGH +  D+  L++ YPS ++RD A Y
Sbjct: 196 EDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTAKY 255

Query: 249 PPLMKTSKLCNSLK--------FEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPMAS 308
            PLMKT+ +  SLK        ++IQ G  + YE+CV  MRLYKRMR Q H      + S
Sbjct: 256 VPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------VCS 315

Query: 309 DPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMD 333
                N   + ++S+LE+M+ E++ + S S+Y CWC+D
Sbjct: 316 GKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLD 339

The following BLAST results are available for this feature:

BLAST of CmaCh15G003330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91560	7.1e-19	37.18	RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2	[more]
Q08237	6.0e-18	29.89	RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=55...	[more]
Q9GZR2	1.7e-17	30.10	RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2	[more]
Q6CMT3	2.3e-17	31.84	RNA exonuclease 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 707...	[more]
Q4WHF8	8.6e-17	33.73	RNA exonuclease 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 10...	[more]

BLAST of CmaCh15G003330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZ30	1.1e-197	97.67	RNA exonuclease 4 OS=Cucurbita maxima OX=3661 GN=LOC111489566 PE=3 SV=1	[more]
A0A6J1FEK0	6.3e-196	96.79	RNA exonuclease 4 OS=Cucurbita moschata OX=3662 GN=LOC111444794 PE=3 SV=1	[more]
A0A6J1BXL4	4.6e-170	84.30	RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1	[more]
A0A6J1BZE0	1.9e-168	83.57	RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1	[more]
A0A1S3C947	1.6e-151	75.00	RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103498183 PE=3 SV=1	[more]

BLAST of CmaCh15G003330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993635.1	2.4e-197	97.67	RNA exonuclease 4-like [Cucurbita maxima]	[more]
XP_022938612.1	1.3e-195	96.79	RNA exonuclease 4-like [Cucurbita moschata]	[more]
XP_023551468.1	2.5e-191	94.75	RNA exonuclease 4-like [Cucurbita pepo subsp. pepo]	[more]
KAG6578645.1	6.3e-182	93.13	hypothetical protein SDJN03_23093, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_011656270.1	2.6e-175	86.05	RNA exonuclease 4 [Cucumis sativus]	[more]

BLAST of CmaCh15G003330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27970.1	1.8e-134	65.42	Exonuclease family protein	[more]
AT5G40310.1	1.3e-129	63.77	Exonuclease family protein	[more]
AT2G48100.1	2.5e-75	42.01	Exonuclease family protein	[more]
AT2G48100.2	2.5e-75	42.01	Exonuclease family protein	[more]
AT2G48100.3	2.5e-75	42.01	Exonuclease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 130..286 e-value: 3.0E-11 score: 53.4
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 156..238 e-value: 3.5E-6 score: 27.7
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 1..60 e-value: 3.1E-5 score: 25.9
None	No IPR available	PANTHER	PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	coord: 2..332
None	No IPR available	PANTHER	PTHR12801:SF122	OS02G0709000 PROTEIN	coord: 2..332
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 129..299 e-value: 2.6E-29 score: 104.0
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 12..34
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 10..39 score: 11.509996
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 147..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G003330.1	CmaCh15G003330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding