CmaCh15G003090 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G003090
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	metalloendoproteinase 2-MMP-like
Location	Cma_Chr15: 1435045 .. 1435781 (+)
RNA-Seq Expression	CmaCh15G003090
Synteny	CmaCh15G003090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAAACCTCGATGCAGGGTTGCGGATATCATCGACGGCAAGAGTGGGATGAAATCAGGCAAGAATATGGTGAATCAACAAAGAAAAAGTGGTCGTTTCCATGAAGTTTCTCATTTTACTTTCTTCAAAGTAAACCTTAAATGGCCTAATTCCAAGTCTCACCTCACTTATGGTAAATTTAGTTTTCACATAAAGTTGAGTTATATTTTACATGATCTTCTGTACTAATATCATGATTTATTTAGGATTCCTCGAAAATAAGCTTTGAAAGGGGTGACCTGTTAGACGAACAGGATTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGAATTTGCTTTGGGCTTCCTAAAAGGTCTCATACTAATAGAGTTAGTATTTCTCACACTTATAAACCCATGATCATTCCCTAAATTAGTCGATGTGGGACTTTCATCATCCAACATGACCATAGAGATGGCTCTCCCTTTGACAATGTTGGAGGAGTGATAGCCCATGCTTTGTTACATTTTGACGCGGTCGAGCGTTGGACCGATGGGGCGGTTCCTAATTCGTACGATGTGGAGACGGTGGCGTTGCATGAGATTGGACACCTTCTCAGCCTTCGTCATAGCTCGGTCGAAGGGGCTATTATGTGGCCAACCATCATGAGAGGAGCTACCAAGGGTTTGCATGCCGATGATATTGCAGGCATCAAGGCTTTATACACTGCTACCTCTTGA

mRNA sequence

ATGTCGAAACCTCGATGCAGGGTTGCGGATATCATCGACGGCAAGAGTGGGATGAAATCAGGCAAGAATATGGATTCCTCGAAAATAAGCTTTGAAAGGGGTGACCTGTTAGACGAACAGGATTCTCCACAATGTCGATGTGGGACTTTCATCATCCAACATGACCATAGAGATGGCTCTCCCTTTGACAATGTTGGAGGAGTGATAGCCCATGCTTTGTTACATTTTGACGCGGTCGAGCGTTGGACCGATGGGGCGGTTCCTAATTCGTACGATGTGGAGACGGTGGCGTTGCATGAGATTGGACACCTTCTCAGCCTTCGTCATAGCTCGGTCGAAGGGGCTATTATGTGGCCAACCATCATGAGAGGAGCTACCAAGGGTTTGCATGCCGATGATATTGCAGGCATCAAGGCTTTATACACTGCTACCTCTTGA

Coding sequence (CDS)

ATGTCGAAACCTCGATGCAGGGTTGCGGATATCATCGACGGCAAGAGTGGGATGAAATCAGGCAAGAATATGGATTCCTCGAAAATAAGCTTTGAAAGGGGTGACCTGTTAGACGAACAGGATTCTCCACAATGTCGATGTGGGACTTTCATCATCCAACATGACCATAGAGATGGCTCTCCCTTTGACAATGTTGGAGGAGTGATAGCCCATGCTTTGTTACATTTTGACGCGGTCGAGCGTTGGACCGATGGGGCGGTTCCTAATTCGTACGATGTGGAGACGGTGGCGTTGCATGAGATTGGACACCTTCTCAGCCTTCGTCATAGCTCGGTCGAAGGGGCTATTATGTGGCCAACCATCATGAGAGGAGCTACCAAGGGTTTGCATGCCGATGATATTGCAGGCATCAAGGCTTTATACACTGCTACCTCTTGA

Protein sequence

MSKPRCRVADIIDGKSGMKSGKNMDSSKISFERGDLLDEQDSPQCRCGTFIIQHDHRDGSPFDNVGGVIAHALLHFDAVERWTDGAVPNSYDVETVALHEIGHLLSLRHSSVEGAIMWPTIMRGATKGLHADDIAGIKALYTATS

Homology

[Close]

BLAST of CmaCh15G003090 vs. ExPASy Swiss-Prot
Match: O04529 (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.4e-16
Identity = 50/103 (48.54%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 55  DHRDGSPFDNVGGVIAHAL------LHFDAVERWTDG-------AVPNSYDVETVALHEI 114
           DH DG PFD V G +AHA        H DA E W          +V  + D+E+VA+HEI
Sbjct: 223 DHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSVTAAVDLESVAVHEI 282

Query: 115 GHLLSLRHSSVEGAIMWPTIMRGATK-GLHADDIAGIKALYTA 144
           GHLL L HSSVE +IM+PTI  G  K  L  DD+ GI+ LY A
Sbjct: 283 GHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYGA 325

[Close]

BLAST of CmaCh15G003090 vs. ExPASy Swiss-Prot
Match: Q5XF51 (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-15
Identity = 48/104 (46.15%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 55  DHRDGSPFDNVGGVIAHAL------LHFDAVERWT------DG--AVPNSYDVETVALHE 114
           +H DG PFD     +AHA        H D  E W       DG  +V  + D+E+VA+HE
Sbjct: 227 EHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFISVSEAVDLESVAVHE 286

Query: 115 IGHLLSLRHSSVEGAIMWPTIMRGATK-GLHADDIAGIKALYTA 144
           IGHLL L HSSVEG+IM+PTI  G  K  L  DD+ G++ LY A
Sbjct: 287 IGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLYGA 330

[Close]

BLAST of CmaCh15G003090 vs. ExPASy Swiss-Prot
Match: O23507 (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.5e-15
Identity = 46/99 (46.46%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 55  DHRDGSPFDNVGGVIAHAL------LHFDAVERW-----TDGAVPNSYDVETVALHEIGH 114
           DH DG PFD V G +AHA       LH DA E W       G+   + D+E+VA HEIGH
Sbjct: 220 DHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVAVDLESVATHEIGH 279

Query: 115 LLSLRHSSVEGAIMWPTIMRGATK-GLHADDIAGIKALY 142
           LL L HSS E A+M+P++     K  L  DD+AG+  LY
Sbjct: 280 LLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLY 318

[Close]

BLAST of CmaCh15G003090 vs. ExPASy Swiss-Prot
Match: P03956 (Interstitial collagenase OS=Homo sapiens OX=9606 GN=MMP1 PE=1 SV=3)

HSP 1 Score: 82.4 bits (202), Expect = 4.6e-15
Identity = 43/99 (43.43%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 52  IQHDHRDGSPFDNVGGVIAHAL---------LHFDAVERWTDGAVPNSYDVETVALHEIG 111
           ++ DHRD SPFD  GG +AHA           HFD  ERWT+      Y++  VA HE+G
Sbjct: 164 VRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF--REYNLHRVAAHELG 223

Query: 112 HLLSLRHSSVEGAIMWPTIMRGATKGLHADDIAGIKALY 142
           H L L HS+  GA+M+P+        L  DDI GI+A+Y
Sbjct: 224 HSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIY 260

[Close]

BLAST of CmaCh15G003090 vs. ExPASy Swiss-Prot
Match: Q8GWW6 (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.8e-15
Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 55  DHRDGSPFDNVGGVIAHAL------LHFDAVERWT----DGAVPNSYDVETVALHEIGHL 114
           DH DG PFD V GV+AH        LH D  E W     +     + D+E+VA+HEIGH+
Sbjct: 198 DHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHV 257

Query: 115 LSLRHSSVEGAIMWPTIM-RGATKGLHADDIAGIKALY 142
           L L HSSV+ A M+PT+  R     L+ DD+ G+++LY
Sbjct: 258 LGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLY 295

[Close]

BLAST of CmaCh15G003090 vs. ExPASy TrEMBL
Match: A0A6J1FFZ1 (metalloendoproteinase 2-MMP-like OS=Cucurbita moschata OX=3662 GN=LOC111445135 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.2e-45
Identity = 114/202 (56.44%), Postives = 120/202 (59.41%), Query Frame = 0


Query: 1   MSKPRCRVADIIDGKSGMKSGKNM-----------DSSKISFERGDLLDEQDSPQCRCG- 60
           MSKPRC VADIIDGKSGMKSGKNM             S  +F +G+L           G 
Sbjct: 28  MSKPRCGVADIIDGKSGMKSGKNMVNQHRKSGHFHQVSHFTFFKGNLKWPNSKSHLTYGF 87

Query: 61  -------------------------TFII--------------QHDHRDGSPFDNVGGVI 120
                                    +F +              + DH DG PFDNVGGVI
Sbjct: 88  LPGTPSGAVDPVGRAFTTWAANTHFSFSLASSYKTADIKISFERGDHGDGFPFDNVGGVI 147

Query: 121 AHAL------LHFDAVERWTDGAVPNSYDVETVALHEIGHLLSLRHSSVEGAIMWPTIMR 146
           AHA       LHFDAVERWTDGAVPNSYDVETVALHEIGHLL L HSSVEGAIMWPTIMR
Sbjct: 148 AHAFAPTDGRLHFDAVERWTDGAVPNSYDVETVALHEIGHLLGLYHSSVEGAIMWPTIMR 207

[Close]

BLAST of CmaCh15G003090 vs. ExPASy TrEMBL
Match: A0A5A7T7T1 (Metalloendoproteinase 2-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1582G00140 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 3.1e-38
Identity = 100/202 (49.50%), Postives = 113/202 (55.94%), Query Frame = 0


Query: 1   MSKPRCRVADIIDGKSGMKSGKNM------------DSSKISFERGDLL----------- 60
           MSKPRC VADII+G++GMKSGK +            + S  +F  G+L            
Sbjct: 81  MSKPRCGVADIINGRTGMKSGKRLVNRHRKIIGHFHEVSHFAFFEGNLKWPNSKSHLTYG 140

Query: 61  ------DEQDSPQCRCGT-----------------------FIIQHDHRDGSPFDNVGGV 120
                  E  SP  R  T                          + DH DG PFD+VGGV
Sbjct: 141 FLPGTPSEAISPVNRAFTTWAANTHFSFSQESNYENADIKVSFERGDHGDGFPFDSVGGV 200

Query: 121 IAHAL------LHFDAVERWTDGAVPNSYDVETVALHEIGHLLSLRHSSVEGAIMWPTIM 145
           +AHA       LHFDAVE W DGAVPNSYD+ETVALHEIGHLL L HSSVEGAIMWP+IM
Sbjct: 201 LAHAFAPTDGRLHFDAVEHWADGAVPNSYDMETVALHEIGHLLGLHHSSVEGAIMWPSIM 260

[Close]

BLAST of CmaCh15G003090 vs. ExPASy TrEMBL
Match: A0A1S3C925 (metalloendoproteinase 2-MMP-like OS=Cucumis melo OX=3656 GN=LOC103498039 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 3.1e-38
Identity = 100/202 (49.50%), Postives = 113/202 (55.94%), Query Frame = 0


Query: 1   MSKPRCRVADIIDGKSGMKSGKNM------------DSSKISFERGDLL----------- 60
           MSKPRC VADII+G++GMKSGK +            + S  +F  G+L            
Sbjct: 81  MSKPRCGVADIINGRTGMKSGKRLVNRHRKIIGHFHEVSHFAFFEGNLKWPNSKSHLTYG 140

Query: 61  ------DEQDSPQCRCGT-----------------------FIIQHDHRDGSPFDNVGGV 120
                  E  SP  R  T                          + DH DG PFD+VGGV
Sbjct: 141 FLPGTPSEAISPVNRAFTTWAANTHFSFSQESNYENADIKVTFERGDHGDGFPFDSVGGV 200

Query: 121 IAHAL------LHFDAVERWTDGAVPNSYDVETVALHEIGHLLSLRHSSVEGAIMWPTIM 145
           +AHA       LHFDAVE W DGAVPNSYD+ETVALHEIGHLL L HSSVEGAIMWP+IM
Sbjct: 201 LAHAFAPTDGRLHFDAVEHWADGAVPNSYDMETVALHEIGHLLGLHHSSVEGAIMWPSIM 260

[Close]

BLAST of CmaCh15G003090 vs. ExPASy TrEMBL
Match: A0A0A0KS47 (ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G633160 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.0e-37
Identity = 100/202 (49.50%), Postives = 111/202 (54.95%), Query Frame = 0


Query: 1   MSKPRCRVADIIDGKSGMKSGKNM------------DSSKISFERGDLL----------- 60
           MSKPRC VADII+GK+ MKSGK              + S  +F  G+L            
Sbjct: 112 MSKPRCGVADIINGKTSMKSGKRFVNQHRKISGHFHEVSHFAFFEGNLRWPDSKSHLTYG 171

Query: 61  ------DEQDSPQCRCGT-----------------------FIIQHDHRDGSPFDNVGGV 120
                  E  SP  R  T                          + DH DG PFD+VGGV
Sbjct: 172 FLPGTPSEAISPVNRAFTTWAANTHFSFSQESKYENADIKISFEKGDHGDGFPFDSVGGV 231

Query: 121 IAHAL------LHFDAVERWTDGAVPNSYDVETVALHEIGHLLSLRHSSVEGAIMWPTIM 145
           +AHA       LHFDAVE W DGAVP SYD+ETVALHEIGHLL L HSSVEGAIMWP+IM
Sbjct: 232 LAHAFAPTDGRLHFDAVEHWADGAVPKSYDMETVALHEIGHLLGLHHSSVEGAIMWPSIM 291

[Close]

BLAST of CmaCh15G003090 vs. ExPASy TrEMBL
Match: A0A6J1JTF5 (metalloendoproteinase 2-MMP-like OS=Cucurbita maxima OX=3661 GN=LOC111489576 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 9.8e-37
Identity = 102/203 (50.25%), Postives = 109/203 (53.69%), Query Frame = 0


Query: 1   MSKPRCRVADIIDGKSGMKSGKNM--------------------------DSSKISFERG 60
           MSKPRC VAD+  GK+GM SGK M                           +SK     G
Sbjct: 113 MSKPRCGVADVFHGKTGMNSGKKMVNRHRKISRHFHGVSHFAFFDGNPKWPASKSHLAYG 172

Query: 61  DLLD---EQDSPQCRCGT-------FIIQH----------------DHRDGSPFDNVGGV 120
            L     E  +P  R  T       F                    DH DG  FD VGGV
Sbjct: 173 FLPGTPIEAIAPVGRAFTTWAANTHFTFSQASSYETADIKISFESGDHGDGEAFDGVGGV 232

Query: 121 IAHAL------LHFDAVERWTDGAVPNSYDVETVALHEIGHLLSLRHSSVEGAIMWPTIM 146
           IAHA       LHFDA+E W  GAVPNS+D+ETVALHEIGHLL L HSSVEGAIMWPTIM
Sbjct: 233 IAHAFSPTDGRLHFDAIETWAIGAVPNSFDMETVALHEIGHLLGLHHSSVEGAIMWPTIM 292

[Close]

BLAST of CmaCh15G003090 vs. NCBI nr
Match: KAG6578617.1 (Metalloendoproteinase 2-MMP, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 206.5 bits (524), Expect = 1.6e-49
Identity = 112/162 (69.14%), Postives = 117/162 (72.22%), Query Frame = 0


Query: 1   MSKPRCRVADIIDGKSGMKSGKNM-----------DSSKISFERGDLLDEQDSPQCRCGT 60
           MSKPRC VADIIDGKSGMKSGKNM             S  +F +G+L           G+
Sbjct: 107 MSKPRCGVADIIDGKSGMKSGKNMVNQHRKSGHFHQVSHFTFFKGNLKWPNSKSHLTYGS 166

Query: 61  FIIQHDHRDGSPFDNVGGVIAHAL------LHFDAVERWTDGAVPNSYDVETVALHEIGH 120
                DH DG PFDNVGGVIAHA       LHFDAV+RWTDGAVPNSYDVETVALHEIGH
Sbjct: 167 -----DHGDGFPFDNVGGVIAHAFAPTDGRLHFDAVKRWTDGAVPNSYDVETVALHEIGH 226

Query: 121 LLSLRHSSVEGAIMWPTIMRGATKGLHADDIAGIKALYTATS 146
           LL L HSSVEGAIMWPTIMRGATKGLHADDIAGIKALYT TS
Sbjct: 227 LLGLYHSSVEGAIMWPTIMRGATKGLHADDIAGIKALYTPTS 263

[Close]

BLAST of CmaCh15G003090 vs. NCBI nr
Match: XP_023551531.1 (metalloendoproteinase 2-MMP-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.0 bits (489), Expect = 1.8e-45
Identity = 112/202 (55.45%), Postives = 118/202 (58.42%), Query Frame = 0


Query: 1   MSKPRCRVADIIDGKSGMKSGKNM-----------DSSKISFERGDLLDEQDSPQCRCGT 60
           MSKPRC VADIIDGKSGMKSG NM           + S  +F +G+L           G 
Sbjct: 107 MSKPRCGVADIIDGKSGMKSGNNMVNQHRKSGHFHEVSHFTFFKGNLKWPNSKSHLTYGF 166

Query: 61  F----------------------------------------IIQHDHRDGSPFDNVGGVI 120
                                                      + DH DGSPFDNVGGV+
Sbjct: 167 LPGTPSGAIDPVGRAFTTWAANTHFSFSRASSYKTADIKISFERGDHGDGSPFDNVGGVL 226

Query: 121 AHAL------LHFDAVERWTDGAVPNSYDVETVALHEIGHLLSLRHSSVEGAIMWPTIMR 146
           AHA       LHFDAVERWTDGAVPNSYDVETVALHEIGHLL L HSSVEGAIMWPTIMR
Sbjct: 227 AHAFAPTDGRLHFDAVERWTDGAVPNSYDVETVALHEIGHLLGLHHSSVEGAIMWPTIMR 286

[Close]

BLAST of CmaCh15G003090 vs. NCBI nr
Match: XP_022939137.1 (metalloendoproteinase 2-MMP-like [Cucurbita moschata])

HSP 1 Score: 192.6 bits (488), Expect = 2.4e-45
Identity = 114/202 (56.44%), Postives = 120/202 (59.41%), Query Frame = 0


Query: 1   MSKPRCRVADIIDGKSGMKSGKNM-----------DSSKISFERGDLLDEQDSPQCRCG- 60
           MSKPRC VADIIDGKSGMKSGKNM             S  +F +G+L           G 
Sbjct: 28  MSKPRCGVADIIDGKSGMKSGKNMVNQHRKSGHFHQVSHFTFFKGNLKWPNSKSHLTYGF 87

Query: 61  -------------------------TFII--------------QHDHRDGSPFDNVGGVI 120
                                    +F +              + DH DG PFDNVGGVI
Sbjct: 88  LPGTPSGAVDPVGRAFTTWAANTHFSFSLASSYKTADIKISFERGDHGDGFPFDNVGGVI 147

Query: 121 AHAL------LHFDAVERWTDGAVPNSYDVETVALHEIGHLLSLRHSSVEGAIMWPTIMR 146
           AHA       LHFDAVERWTDGAVPNSYDVETVALHEIGHLL L HSSVEGAIMWPTIMR
Sbjct: 148 AHAFAPTDGRLHFDAVERWTDGAVPNSYDVETVALHEIGHLLGLYHSSVEGAIMWPTIMR 207

[Close]

BLAST of CmaCh15G003090 vs. NCBI nr
Match: KAA0037429.1 (metalloendoproteinase 2-MMP-like [Cucumis melo var. makuwa] >TYK00222.1 metalloendoproteinase 2-MMP-like [Cucumis melo var. makuwa])

HSP 1 Score: 167.9 bits (424), Expect = 6.3e-38
Identity = 100/202 (49.50%), Postives = 113/202 (55.94%), Query Frame = 0


Query: 1   MSKPRCRVADIIDGKSGMKSGKNM------------DSSKISFERGDLL----------- 60
           MSKPRC VADII+G++GMKSGK +            + S  +F  G+L            
Sbjct: 81  MSKPRCGVADIINGRTGMKSGKRLVNRHRKIIGHFHEVSHFAFFEGNLKWPNSKSHLTYG 140

Query: 61  ------DEQDSPQCRCGT-----------------------FIIQHDHRDGSPFDNVGGV 120
                  E  SP  R  T                          + DH DG PFD+VGGV
Sbjct: 141 FLPGTPSEAISPVNRAFTTWAANTHFSFSQESNYENADIKVSFERGDHGDGFPFDSVGGV 200

Query: 121 IAHAL------LHFDAVERWTDGAVPNSYDVETVALHEIGHLLSLRHSSVEGAIMWPTIM 145
           +AHA       LHFDAVE W DGAVPNSYD+ETVALHEIGHLL L HSSVEGAIMWP+IM
Sbjct: 201 LAHAFAPTDGRLHFDAVEHWADGAVPNSYDMETVALHEIGHLLGLHHSSVEGAIMWPSIM 260

[Close]

BLAST of CmaCh15G003090 vs. NCBI nr
Match: XP_008458713.1 (PREDICTED: metalloendoproteinase 2-MMP-like [Cucumis melo])

HSP 1 Score: 167.9 bits (424), Expect = 6.3e-38
Identity = 100/202 (49.50%), Postives = 113/202 (55.94%), Query Frame = 0


Query: 1   MSKPRCRVADIIDGKSGMKSGKNM------------DSSKISFERGDLL----------- 60
           MSKPRC VADII+G++GMKSGK +            + S  +F  G+L            
Sbjct: 81  MSKPRCGVADIINGRTGMKSGKRLVNRHRKIIGHFHEVSHFAFFEGNLKWPNSKSHLTYG 140

Query: 61  ------DEQDSPQCRCGT-----------------------FIIQHDHRDGSPFDNVGGV 120
                  E  SP  R  T                          + DH DG PFD+VGGV
Sbjct: 141 FLPGTPSEAISPVNRAFTTWAANTHFSFSQESNYENADIKVTFERGDHGDGFPFDSVGGV 200

Query: 121 IAHAL------LHFDAVERWTDGAVPNSYDVETVALHEIGHLLSLRHSSVEGAIMWPTIM 145
           +AHA       LHFDAVE W DGAVPNSYD+ETVALHEIGHLL L HSSVEGAIMWP+IM
Sbjct: 201 LAHAFAPTDGRLHFDAVEHWADGAVPNSYDMETVALHEIGHLLGLHHSSVEGAIMWPSIM 260

[Close]

BLAST of CmaCh15G003090 vs. TAIR 10
Match: AT1G70170.1 (matrix metalloproteinase )

HSP 1 Score: 86.7 bits (213), Expect = 1.7e-17
Identity = 50/103 (48.54%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 55  DHRDGSPFDNVGGVIAHAL------LHFDAVERWTDG-------AVPNSYDVETVALHEI 114
           DH DG PFD V G +AHA        H DA E W          +V  + D+E+VA+HEI
Sbjct: 223 DHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSVTAAVDLESVAVHEI 282

Query: 115 GHLLSLRHSSVEGAIMWPTIMRGATK-GLHADDIAGIKALYTA 144
           GHLL L HSSVE +IM+PTI  G  K  L  DD+ GI+ LY A
Sbjct: 283 GHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYGA 325

[Close]

BLAST of CmaCh15G003090 vs. TAIR 10
Match: AT1G24140.1 (Matrixin family protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-16
Identity = 48/104 (46.15%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 55  DHRDGSPFDNVGGVIAHAL------LHFDAVERWT------DG--AVPNSYDVETVALHE 114
           +H DG PFD     +AHA        H D  E W       DG  +V  + D+E+VA+HE
Sbjct: 227 EHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFISVSEAVDLESVAVHE 286

Query: 115 IGHLLSLRHSSVEGAIMWPTIMRGATK-GLHADDIAGIKALYTA 144
           IGHLL L HSSVEG+IM+PTI  G  K  L  DD+ G++ LY A
Sbjct: 287 IGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLYGA 330

[Close]

BLAST of CmaCh15G003090 vs. TAIR 10
Match: AT4G16640.1 (Matrixin family protein )

HSP 1 Score: 82.8 bits (203), Expect = 2.5e-16
Identity = 46/99 (46.46%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 55  DHRDGSPFDNVGGVIAHAL------LHFDAVERW-----TDGAVPNSYDVETVALHEIGH 114
           DH DG PFD V G +AHA       LH DA E W       G+   + D+E+VA HEIGH
Sbjct: 220 DHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVAVDLESVATHEIGH 279

Query: 115 LLSLRHSSVEGAIMWPTIMRGATK-GLHADDIAGIKALY 142
           LL L HSS E A+M+P++     K  L  DD+AG+  LY
Sbjct: 280 LLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLY 318

[Close]

BLAST of CmaCh15G003090 vs. TAIR 10
Match: AT2G45040.1 (Matrixin family protein )

HSP 1 Score: 81.6 bits (200), Expect = 5.5e-16
Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 55  DHRDGSPFDNVGGVIAHAL------LHFDAVERWT----DGAVPNSYDVETVALHEIGHL 114
           DH DG PFD V GV+AH        LH D  E W     +     + D+E+VA+HEIGH+
Sbjct: 198 DHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHV 257

Query: 115 LSLRHSSVEGAIMWPTIM-RGATKGLHADDIAGIKALY 142
           L L HSSV+ A M+PT+  R     L+ DD+ G+++LY
Sbjct: 258 LGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLY 295

[Close]

BLAST of CmaCh15G003090 vs. TAIR 10
Match: AT1G59970.1 (Matrixin family protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.6e-15
Identity = 49/103 (47.57%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 55  DHRDGSPFDNVGGVIAHA------LLHFDAVERW--TDG-------AVPNSYDVETVALH 114
           +H DG PFD   G +AHA      +LH D  E W  ++G        V    D+E+VA+H
Sbjct: 211 EHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTTVVDLESVAVH 270

Query: 115 EIGHLLSLRHSSVEGAIMWPTIMRGATK-GLHADDIAGIKALY 142
           EIGHLL L HSSVE AIM+P I  G  K  L  DDI GI+ LY
Sbjct: 271 EIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLY 313

The following BLAST results are available for this feature:

BLAST of CmaCh15G003090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04529	2.4e-16	48.54	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1	[more]
Q5XF51	1.6e-15	46.15	Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1	[more]
O23507	3.5e-15	46.46	Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1	[more]
P03956	4.6e-15	43.43	Interstitial collagenase OS=Homo sapiens OX=9606 GN=MMP1 PE=1 SV=3	[more]
Q8GWW6	7.8e-15	43.88	Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1	[more]

BLAST of CmaCh15G003090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFZ1	1.2e-45	56.44	metalloendoproteinase 2-MMP-like OS=Cucurbita moschata OX=3662 GN=LOC111445135 P...	[more]
A0A5A7T7T1	3.1e-38	49.50	Metalloendoproteinase 2-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C925	3.1e-38	49.50	metalloendoproteinase 2-MMP-like OS=Cucumis melo OX=3656 GN=LOC103498039 PE=3 SV...	[more]
A0A0A0KS47	2.0e-37	49.50	ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G633160 PE=3 S...	[more]
A0A6J1JTF5	9.8e-37	50.25	metalloendoproteinase 2-MMP-like OS=Cucurbita maxima OX=3661 GN=LOC111489576 PE=...	[more]

BLAST of CmaCh15G003090 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6578617.1	1.6e-49	69.14	Metalloendoproteinase 2-MMP, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023551531.1	1.8e-45	55.45	metalloendoproteinase 2-MMP-like [Cucurbita pepo subsp. pepo]	[more]
XP_022939137.1	2.4e-45	56.44	metalloendoproteinase 2-MMP-like [Cucurbita moschata]	[more]
KAA0037429.1	6.3e-38	49.50	metalloendoproteinase 2-MMP-like [Cucumis melo var. makuwa] >TYK00222.1 metalloe...	[more]
XP_008458713.1	6.3e-38	49.50	PREDICTED: metalloendoproteinase 2-MMP-like [Cucumis melo]	[more]

BLAST of CmaCh15G003090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70170.1	1.7e-17	48.54	matrix metalloproteinase	[more]
AT1G24140.1	1.1e-16	46.15	Matrixin family protein	[more]
AT4G16640.1	2.5e-16	46.46	Matrixin family protein	[more]
AT2G45040.1	5.5e-16	43.88	Matrixin family protein	[more]
AT1G59970.1	1.6e-15	47.57	Matrixin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021190	Peptidase M10A	PRINTS	PR00138	MATRIXIN	coord: 96..121 score: 53.89 coord: 129..142 score: 53.14 coord: 1..8 score: 35.71
IPR006026	Peptidase, metallopeptidase	SMART	SM00235	col_5	coord: 21..143 e-value: 0.0067 score: -1.5
IPR024079	Metallopeptidase, catalytic domain superfamily	GENE3D	3.40.390.10	Collagenase (Catalytic Domain)	coord: 24..145 e-value: 5.3E-28 score: 100.1
IPR001818	Peptidase M10, metallopeptidase	PFAM	PF00413	Peptidase_M10	coord: 53..142 e-value: 2.1E-23 score: 82.9
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 53..142
None	No IPR available	PANTHER	PTHR10201:SF269	METALLOENDOPROTEINASE 3-MMP-LIKE	coord: 53..142
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 50..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G003090.1	CmaCh15G003090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0031012	extracellular matrix
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008237	metallopeptidase activity