CmaCh15G002990 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh15G002990
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptioncoiled-coil domain-containing glutamate-rich protein 1
LocationCma_Chr15: 1401552 .. 1402085 (+)
RNA-Seq ExpressionCmaCh15G002990
SyntenyCmaCh15G002990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAGGGCAGAAGAAAGTTACAGAGAATCAAAGCAAGCAGAGGTTGAAGATAAGGATTCTATAGGCACGGCTCTGTTATCAGCAGGAACAGCATTGTTAATGGCAGCTTGTTTGAAGAGAGCTGTGGTTCTGTTCTTGGTTGAACAATGGCGGATCTGGGTGTTCCTTCTCTTAAATCTCATCCTCGTAGCAATTTTCTTCACTTCAAGTCCTTCAAGTTACAGCGAAAGCCAAACCCAAGAGGCCAATGCTAAAATAAAGCAGAAAAAGATCGAAAACAGAGAGTGCAAGGAGGCTGAGAAGGTAGAAAAGGTTGAGATCAAACATCAAGAGAGGGAAAAAGAAGAAGAAGAAGAAGAACTCCAAGAAGAAGAAGAAGAACAAGAACAAGAACAAGAGGAAATTGGGTTGTCGAAAGAGGAATTGAATGAGAGAGTGGAAGCTTTCATTGTGATGTTCAAGAAGCAATTGATTTCCGATGCAAGAAGAGGGGGAAACAGGCGCACCCCATTGAGCTACAATCCTCAATAG

mRNA sequence

ATGTGGAGGGCAGAAGAAAGTTACAGAGAATCAAAGCAAGCAGAGGTTGAAGATAAGGATTCTATAGGCACGGCTCTGTTATCAGCAGGAACAGCATTGTTAATGGCAGCTTGTTTGAAGAGAGCTGTGGTTCTGTTCTTGGTTGAACAATGGCGGATCTGGGTGTTCCTTCTCTTAAATCTCATCCTCGTAGCAATTTTCTTCACTTCAAGTCCTTCAAGTTACAGCGAAAGCCAAACCCAAGAGGCCAATGCTAAAATAAAGCAGAAAAAGATCGAAAACAGAGAGTGCAAGGAGGCTGAGAAGGTAGAAAAGGTTGAGATCAAACATCAAGAGAGGGAAAAAGAAGAAGAAGAAGAAGAACTCCAAGAAGAAGAAGAAGAACAAGAACAAGAACAAGAGGAAATTGGGTTGTCGAAAGAGGAATTGAATGAGAGAGTGGAAGCTTTCATTGTGATGTTCAAGAAGCAATTGATTTCCGATGCAAGAAGAGGGGGAAACAGGCGCACCCCATTGAGCTACAATCCTCAATAG

Coding sequence (CDS)

ATGTGGAGGGCAGAAGAAAGTTACAGAGAATCAAAGCAAGCAGAGGTTGAAGATAAGGATTCTATAGGCACGGCTCTGTTATCAGCAGGAACAGCATTGTTAATGGCAGCTTGTTTGAAGAGAGCTGTGGTTCTGTTCTTGGTTGAACAATGGCGGATCTGGGTGTTCCTTCTCTTAAATCTCATCCTCGTAGCAATTTTCTTCACTTCAAGTCCTTCAAGTTACAGCGAAAGCCAAACCCAAGAGGCCAATGCTAAAATAAAGCAGAAAAAGATCGAAAACAGAGAGTGCAAGGAGGCTGAGAAGGTAGAAAAGGTTGAGATCAAACATCAAGAGAGGGAAAAAGAAGAAGAAGAAGAAGAACTCCAAGAAGAAGAAGAAGAACAAGAACAAGAACAAGAGGAAATTGGGTTGTCGAAAGAGGAATTGAATGAGAGAGTGGAAGCTTTCATTGTGATGTTCAAGAAGCAATTGATTTCCGATGCAAGAAGAGGGGGAAACAGGCGCACCCCATTGAGCTACAATCCTCAATAG

Protein sequence

MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLNLILVAIFFTSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKVEIKHQEREKEEEEEELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYNPQ
Homology
BLAST of CmaCh15G002990 vs. ExPASy TrEMBL
Match: A0A6J1C149 (coiled-coil domain-containing glutamate-rich protein 1 OS=Momordica charantia OX=3673 GN=LOC111006473 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 8.3e-54
Identity = 136/178 (76.40%), Postives = 157/178 (88.20%), Query Frame = 0

Query: 1   MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
           MW+AEE+YRE+KQ EVEDKDS+GT LLSAGTALLMAACLKRAVVLFLVEQWR+WVFL+LN
Sbjct: 1   MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60

Query: 61  LILVAIFFTSSPSSYSESQTQEANAKIKQKKIENRECKEA-EKVEKVEIKHQEREKEE-- 120
           LI+VAIFFTSSPS+Y ES  Q+ +   KQKKI++RECK A EKVEKVE K QE +KEE  
Sbjct: 61  LIVVAIFFTSSPSNYRES--QDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEI 120

Query: 121 EEEELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYN 176
           EEEE++EEEEE+E+E  ++GLSKEELNERVEAFIVMFK+QLI DAR+GGN  TPLSYN
Sbjct: 121 EEEEIEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYN 176

BLAST of CmaCh15G002990 vs. ExPASy TrEMBL
Match: A0A6J1H605 (uncharacterized protein LOC111460852 OS=Cucurbita moschata OX=3662 GN=LOC111460852 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 2.2e-46
Identity = 130/178 (73.03%), Postives = 141/178 (79.21%), Query Frame = 0

Query: 1   MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVL-FLVEQWRIWVFLLL 60
           MWRAEE  RESKQ EVEDKD     +LSAGTALLMAACLKRAVVL FLVEQWRIWVFL L
Sbjct: 1   MWRAEEGCRESKQGEVEDKDCTSRGVLSAGTALLMAACLKRAVVLFFLVEQWRIWVFLAL 60

Query: 61  NLILVAIFFTSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKVEIKHQEREKEEEE 120
           NLILV IFFTSSP+SYSESQTQE     K+KKI +    E EKVE+VEIK QE +KEEE 
Sbjct: 61  NLILVTIFFTSSPASYSESQTQEPT---KKKKIRS---SEPEKVEEVEIKQQEMDKEEEI 120

Query: 121 EELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYNPQ 178
           EE        ++E+E IGLSKEELNERVEAFIVMFKKQLISDAR+ G+RRTPLSY  Q
Sbjct: 121 EE--------DEEEEVIGLSKEELNERVEAFIVMFKKQLISDARKVGSRRTPLSYKTQ 164

BLAST of CmaCh15G002990 vs. ExPASy TrEMBL
Match: A0A1S3C9Q4 (ABC transporter F family member 4 OS=Cucumis melo OX=3656 GN=LOC103498035 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 2.0e-44
Identity = 129/179 (72.07%), Postives = 145/179 (81.01%), Query Frame = 0

Query: 1   MWRAEESYRESKQ-AEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLL 60
           MWR EE  RE KQ  E EDKDSI  ALLSAGTALLMA CLK+AVV+FLVEQWRIWVFL L
Sbjct: 1   MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKAVVMFLVEQWRIWVFLAL 60

Query: 61  NLILVAIFFTSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVE--KVEIKHQERE-KE 120
           NLILVAIFFTS+P++YSE+Q QE + K KQKK EN E KEA+K E    + K + RE KE
Sbjct: 61  NLILVAIFFTSNPANYSETQKQETSGKTKQKKTENIELKEAKKEEDKTKQKKTENREFKE 120

Query: 121 EEEEELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYN 176
             +EE + EEEE+E+E+EEIGLSKEELNERVEAFIVMFKKQLISDAR+GGNR   LSYN
Sbjct: 121 ARKEEDEIEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKGGNR---LSYN 176

BLAST of CmaCh15G002990 vs. ExPASy TrEMBL
Match: A0A0A0KVE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633200 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 5.2e-40
Identity = 124/185 (67.03%), Postives = 149/185 (80.54%), Query Frame = 0

Query: 1   MWRAEESYRESKQ-AEVEDKDSIGTALLSAGTALLMAACLKR-AVVLFLVEQWRIWVFLL 60
           MWR EE  RE KQ  E EDKDSI  ALLSAGTALLMA CLK+ AVV+FLVEQWRIWVFL+
Sbjct: 1   MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLV 60

Query: 61  LNLILVAIFFTS---SPSSYSESQTQEANAKIKQKKIENRECKEAEKVE----KVEIKHQ 120
           LNLILVAIFFTS   +P++YSE+Q QE + K K KKIE RE +EA+K E    + +I+++
Sbjct: 61  LNLILVAIFFTSNPANPANYSETQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKIENR 120

Query: 121 E-REKEEEEEELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRT 176
           E +E  +EE+E++EE+E +E+E+EEI LSKEELNERVEAFIVMFKKQLISDAR+GGNR  
Sbjct: 121 EIKEAIKEEDEIKEEDEIEEEEEEEIELSKEELNERVEAFIVMFKKQLISDARKGGNR-- 180

BLAST of CmaCh15G002990 vs. ExPASy TrEMBL
Match: A0A6J1JR04 (uncharacterized protein LOC111487056 OS=Cucurbita maxima OX=3661 GN=LOC111487056 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.6e-28
Identity = 101/143 (70.63%), Postives = 110/143 (76.92%), Query Frame = 0

Query: 35  MAACLKRAVVL-FLVEQWRIWVFLLLNLILVAIFFTSSPSSYSESQTQEANAKIKQKKIE 94
           MAACLKRAVVL FLVEQWRIWVFL+LNLILV IFFTSSP+SYSE+Q QE     K+KKI 
Sbjct: 1   MAACLKRAVVLFFLVEQWRIWVFLVLNLILVTIFFTSSPASYSENQIQEPT---KKKKIR 60

Query: 95  NRECKEAEKVEKVEIKHQEREKEEEEEELQEEEEEQEQEQEEIGLSKE------ELNERV 154
           N    E EKVE+VEIK QE  KEEE EE        ++E+EEIGLSKE      ELNERV
Sbjct: 61  N---SEPEKVEEVEIKQQEIGKEEEIEE--------DEEEEEIGLSKEELNERVELNERV 120

Query: 155 EAFIVMFKKQLISDARRGGNRRT 171
           EAFIVMFKKQLISDAR+ GNRRT
Sbjct: 121 EAFIVMFKKQLISDARKVGNRRT 129

BLAST of CmaCh15G002990 vs. NCBI nr
Match: KAG6578611.1 (hypothetical protein SDJN03_23059, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.0 bits (728), Expect = 4.3e-73
Identity = 170/180 (94.44%), Postives = 174/180 (96.67%), Query Frame = 0

Query: 1   MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
           MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN
Sbjct: 1   MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60

Query: 61  LILVAIFFT---SSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKVEIKHQEREKEE 120
           LILVAIFFT   SSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEK+EIKHQEREKEE
Sbjct: 61  LILVAIFFTSSPSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKLEIKHQEREKEE 120

Query: 121 EEEELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYNPQ 178
           EEEE   EEEE+E+E+EEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYNPQ
Sbjct: 121 EEEEELPEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYNPQ 180

BLAST of CmaCh15G002990 vs. NCBI nr
Match: KAG7016160.1 (hypothetical protein SDJN02_21264, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 283.9 bits (725), Expect = 9.6e-73
Identity = 171/182 (93.96%), Postives = 176/182 (96.70%), Query Frame = 0

Query: 1   MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
           MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN
Sbjct: 1   MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60

Query: 61  LILVAIFFT---SSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKVEIKHQEREKEE 120
           LILVAIFFT   SSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEK+EIKHQEREKEE
Sbjct: 61  LILVAIFFTSSPSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKLEIKHQEREKEE 120

Query: 121 EEEE--LQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYN 178
           EEEE   +EEEEE+E+E+EEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYN
Sbjct: 121 EEEEELPEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYN 180

BLAST of CmaCh15G002990 vs. NCBI nr
Match: XP_022134128.1 (coiled-coil domain-containing glutamate-rich protein 1 [Momordica charantia])

HSP 1 Score: 219.9 bits (559), Expect = 1.7e-53
Identity = 136/178 (76.40%), Postives = 157/178 (88.20%), Query Frame = 0

Query: 1   MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
           MW+AEE+YRE+KQ EVEDKDS+GT LLSAGTALLMAACLKRAVVLFLVEQWR+WVFL+LN
Sbjct: 1   MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60

Query: 61  LILVAIFFTSSPSSYSESQTQEANAKIKQKKIENRECKEA-EKVEKVEIKHQEREKEE-- 120
           LI+VAIFFTSSPS+Y ES  Q+ +   KQKKI++RECK A EKVEKVE K QE +KEE  
Sbjct: 61  LIVVAIFFTSSPSNYRES--QDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEI 120

Query: 121 EEEELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYN 176
           EEEE++EEEEE+E+E  ++GLSKEELNERVEAFIVMFK+QLI DAR+GGN  TPLSYN
Sbjct: 121 EEEEIEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYN 176

BLAST of CmaCh15G002990 vs. NCBI nr
Match: XP_038890929.1 (uncharacterized protein LOC120080357 [Benincasa hispida])

HSP 1 Score: 216.1 bits (549), Expect = 2.5e-52
Identity = 135/176 (76.70%), Postives = 149/176 (84.66%), Query Frame = 0

Query: 1   MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
           MWRAEESYRE KQ EVEDKDSIG  LLSAGTALLMAACLK+AVV+FLVEQWRIWVFL+LN
Sbjct: 1   MWRAEESYRELKQGEVEDKDSIGNVLLSAGTALLMAACLKKAVVMFLVEQWRIWVFLVLN 60

Query: 61  LILVAIFFTSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKVEIKHQEREKEEEEE 120
           LILVAIFFTSSP+SYSE+Q +EA    KQKKI+NRE KEAEK E            +EEE
Sbjct: 61  LILVAIFFTSSPASYSENQNEEA----KQKKIKNRELKEAEKTE-----------IKEEE 120

Query: 121 ELQEEE-EEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYN 176
           E++EEE EE+E+E+EEIGLSKEELNERVEAFIVMFKKQLISDAR+G NR TP SYN
Sbjct: 121 EIEEEEIEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKGRNRSTPFSYN 161

BLAST of CmaCh15G002990 vs. NCBI nr
Match: XP_022959957.1 (uncharacterized protein LOC111460852 [Cucurbita moschata] >KAG6602469.1 hypothetical protein SDJN03_07702, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033143.1 hypothetical protein SDJN02_07196, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.3 bits (495), Expect = 4.5e-46
Identity = 130/178 (73.03%), Postives = 141/178 (79.21%), Query Frame = 0

Query: 1   MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVL-FLVEQWRIWVFLLL 60
           MWRAEE  RESKQ EVEDKD     +LSAGTALLMAACLKRAVVL FLVEQWRIWVFL L
Sbjct: 1   MWRAEEGCRESKQGEVEDKDCTSRGVLSAGTALLMAACLKRAVVLFFLVEQWRIWVFLAL 60

Query: 61  NLILVAIFFTSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKVEIKHQEREKEEEE 120
           NLILV IFFTSSP+SYSESQTQE     K+KKI +    E EKVE+VEIK QE +KEEE 
Sbjct: 61  NLILVTIFFTSSPASYSESQTQEPT---KKKKIRS---SEPEKVEEVEIKQQEMDKEEEI 120

Query: 121 EELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYNPQ 178
           EE        ++E+E IGLSKEELNERVEAFIVMFKKQLISDAR+ G+RRTPLSY  Q
Sbjct: 121 EE--------DEEEEVIGLSKEELNERVEAFIVMFKKQLISDARKVGSRRTPLSYKTQ 164

BLAST of CmaCh15G002990 vs. TAIR 10
Match: AT3G28420.1 (Putative membrane lipoprotein )

HSP 1 Score: 52.8 bits (125), Expect = 3.4e-07
Identity = 68/193 (35.23%), Postives = 103/193 (53.37%), Query Frame = 0

Query: 18  DKDSIGTALLSAGTALLMAACLKR-AVVLFLVEQWRIWVFLLLNLILVAIFFTSSPSSYS 77
           +++++ T+LL+A   L M ACLK  + V +L+EQWR  VFL+LN++L+A++FTS+  +  
Sbjct: 10  EEENMCTSLLTAVVVLSM-ACLKHFSSVSYLIEQWRSLVFLILNVVLLAVYFTSTRPNLG 69

Query: 78  ES------------QTQEANAKIKQKK----------------IENRE----CKEAEKVE 137
            S              +E   KIK+KK                +E +E    C   E+ +
Sbjct: 70  RSHDFKTRRGGRLRMMREKKNKIKKKKTRVVVEPACFDQGFLLVEPKEVIKKCVLVEETK 129

Query: 138 KVEIKHQEREKEEEEEELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARR 178
           +V  K +E  K+    + + E   +E E E   LS EELNERVEAFI  F++ L+ DARR
Sbjct: 130 RVCPKFEETVKDCLFHKKEIEYNGEEDEFEPGRLSNEELNERVEAFITTFRQHLVLDARR 189

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1C1498.3e-5476.40coiled-coil domain-containing glutamate-rich protein 1 OS=Momordica charantia OX... [more]
A0A6J1H6052.2e-4673.03uncharacterized protein LOC111460852 OS=Cucurbita moschata OX=3662 GN=LOC1114608... [more]
A0A1S3C9Q42.0e-4472.07ABC transporter F family member 4 OS=Cucumis melo OX=3656 GN=LOC103498035 PE=4 S... [more]
A0A0A0KVE35.2e-4067.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633200 PE=4 SV=1[more]
A0A6J1JR041.6e-2870.63uncharacterized protein LOC111487056 OS=Cucurbita maxima OX=3661 GN=LOC111487056... [more]
Match NameE-valueIdentityDescription
KAG6578611.14.3e-7394.44hypothetical protein SDJN03_23059, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7016160.19.6e-7393.96hypothetical protein SDJN02_21264, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022134128.11.7e-5376.40coiled-coil domain-containing glutamate-rich protein 1 [Momordica charantia][more]
XP_038890929.12.5e-5276.70uncharacterized protein LOC120080357 [Benincasa hispida][more]
XP_022959957.14.5e-4673.03uncharacterized protein LOC111460852 [Cucurbita moschata] >KAG6602469.1 hypothet... [more]
Match NameE-valueIdentityDescription
AT3G28420.13.4e-0735.23Putative membrane lipoprotein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..135
NoneNo IPR availablePANTHERPTHR35997:SF5PROTEIN, PUTATIVE-RELATEDcoord: 6..170
NoneNo IPR availablePANTHERPTHR35997COTTON FIBER PROTEIN-RELATEDcoord: 6..170

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G002990.1CmaCh15G002990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane