Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAGGGCAGAAGAAAGTTACAGAGAATCAAAGCAAGCAGAGGTTGAAGATAAGGATTCTATAGGCACGGCTCTGTTATCAGCAGGAACAGCATTGTTAATGGCAGCTTGTTTGAAGAGAGCTGTGGTTCTGTTCTTGGTTGAACAATGGCGGATCTGGGTGTTCCTTCTCTTAAATCTCATCCTCGTAGCAATTTTCTTCACTTCAAGTCCTTCAAGTTACAGCGAAAGCCAAACCCAAGAGGCCAATGCTAAAATAAAGCAGAAAAAGATCGAAAACAGAGAGTGCAAGGAGGCTGAGAAGGTAGAAAAGGTTGAGATCAAACATCAAGAGAGGGAAAAAGAAGAAGAAGAAGAAGAACTCCAAGAAGAAGAAGAAGAACAAGAACAAGAACAAGAGGAAATTGGGTTGTCGAAAGAGGAATTGAATGAGAGAGTGGAAGCTTTCATTGTGATGTTCAAGAAGCAATTGATTTCCGATGCAAGAAGAGGGGGAAACAGGCGCACCCCATTGAGCTACAATCCTCAATAG
mRNA sequence
ATGTGGAGGGCAGAAGAAAGTTACAGAGAATCAAAGCAAGCAGAGGTTGAAGATAAGGATTCTATAGGCACGGCTCTGTTATCAGCAGGAACAGCATTGTTAATGGCAGCTTGTTTGAAGAGAGCTGTGGTTCTGTTCTTGGTTGAACAATGGCGGATCTGGGTGTTCCTTCTCTTAAATCTCATCCTCGTAGCAATTTTCTTCACTTCAAGTCCTTCAAGTTACAGCGAAAGCCAAACCCAAGAGGCCAATGCTAAAATAAAGCAGAAAAAGATCGAAAACAGAGAGTGCAAGGAGGCTGAGAAGGTAGAAAAGGTTGAGATCAAACATCAAGAGAGGGAAAAAGAAGAAGAAGAAGAAGAACTCCAAGAAGAAGAAGAAGAACAAGAACAAGAACAAGAGGAAATTGGGTTGTCGAAAGAGGAATTGAATGAGAGAGTGGAAGCTTTCATTGTGATGTTCAAGAAGCAATTGATTTCCGATGCAAGAAGAGGGGGAAACAGGCGCACCCCATTGAGCTACAATCCTCAATAG
Coding sequence (CDS)
ATGTGGAGGGCAGAAGAAAGTTACAGAGAATCAAAGCAAGCAGAGGTTGAAGATAAGGATTCTATAGGCACGGCTCTGTTATCAGCAGGAACAGCATTGTTAATGGCAGCTTGTTTGAAGAGAGCTGTGGTTCTGTTCTTGGTTGAACAATGGCGGATCTGGGTGTTCCTTCTCTTAAATCTCATCCTCGTAGCAATTTTCTTCACTTCAAGTCCTTCAAGTTACAGCGAAAGCCAAACCCAAGAGGCCAATGCTAAAATAAAGCAGAAAAAGATCGAAAACAGAGAGTGCAAGGAGGCTGAGAAGGTAGAAAAGGTTGAGATCAAACATCAAGAGAGGGAAAAAGAAGAAGAAGAAGAAGAACTCCAAGAAGAAGAAGAAGAACAAGAACAAGAACAAGAGGAAATTGGGTTGTCGAAAGAGGAATTGAATGAGAGAGTGGAAGCTTTCATTGTGATGTTCAAGAAGCAATTGATTTCCGATGCAAGAAGAGGGGGAAACAGGCGCACCCCATTGAGCTACAATCCTCAATAG
Protein sequence
MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLNLILVAIFFTSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKVEIKHQEREKEEEEEELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYNPQ
Homology
BLAST of CmaCh15G002990 vs. ExPASy TrEMBL
Match:
A0A6J1C149 (coiled-coil domain-containing glutamate-rich protein 1 OS=Momordica charantia OX=3673 GN=LOC111006473 PE=4 SV=1)
HSP 1 Score: 219.9 bits (559), Expect = 8.3e-54
Identity = 136/178 (76.40%), Postives = 157/178 (88.20%), Query Frame = 0
Query: 1 MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
MW+AEE+YRE+KQ EVEDKDS+GT LLSAGTALLMAACLKRAVVLFLVEQWR+WVFL+LN
Sbjct: 1 MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60
Query: 61 LILVAIFFTSSPSSYSESQTQEANAKIKQKKIENRECKEA-EKVEKVEIKHQEREKEE-- 120
LI+VAIFFTSSPS+Y ES Q+ + KQKKI++RECK A EKVEKVE K QE +KEE
Sbjct: 61 LIVVAIFFTSSPSNYRES--QDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEI 120
Query: 121 EEEELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYN 176
EEEE++EEEEE+E+E ++GLSKEELNERVEAFIVMFK+QLI DAR+GGN TPLSYN
Sbjct: 121 EEEEIEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYN 176
BLAST of CmaCh15G002990 vs. ExPASy TrEMBL
Match:
A0A6J1H605 (uncharacterized protein LOC111460852 OS=Cucurbita moschata OX=3662 GN=LOC111460852 PE=4 SV=1)
HSP 1 Score: 195.3 bits (495), Expect = 2.2e-46
Identity = 130/178 (73.03%), Postives = 141/178 (79.21%), Query Frame = 0
Query: 1 MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVL-FLVEQWRIWVFLLL 60
MWRAEE RESKQ EVEDKD +LSAGTALLMAACLKRAVVL FLVEQWRIWVFL L
Sbjct: 1 MWRAEEGCRESKQGEVEDKDCTSRGVLSAGTALLMAACLKRAVVLFFLVEQWRIWVFLAL 60
Query: 61 NLILVAIFFTSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKVEIKHQEREKEEEE 120
NLILV IFFTSSP+SYSESQTQE K+KKI + E EKVE+VEIK QE +KEEE
Sbjct: 61 NLILVTIFFTSSPASYSESQTQEPT---KKKKIRS---SEPEKVEEVEIKQQEMDKEEEI 120
Query: 121 EELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYNPQ 178
EE ++E+E IGLSKEELNERVEAFIVMFKKQLISDAR+ G+RRTPLSY Q
Sbjct: 121 EE--------DEEEEVIGLSKEELNERVEAFIVMFKKQLISDARKVGSRRTPLSYKTQ 164
BLAST of CmaCh15G002990 vs. ExPASy TrEMBL
Match:
A0A1S3C9Q4 (ABC transporter F family member 4 OS=Cucumis melo OX=3656 GN=LOC103498035 PE=4 SV=1)
HSP 1 Score: 188.7 bits (478), Expect = 2.0e-44
Identity = 129/179 (72.07%), Postives = 145/179 (81.01%), Query Frame = 0
Query: 1 MWRAEESYRESKQ-AEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLL 60
MWR EE RE KQ E EDKDSI ALLSAGTALLMA CLK+AVV+FLVEQWRIWVFL L
Sbjct: 1 MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKAVVMFLVEQWRIWVFLAL 60
Query: 61 NLILVAIFFTSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVE--KVEIKHQERE-KE 120
NLILVAIFFTS+P++YSE+Q QE + K KQKK EN E KEA+K E + K + RE KE
Sbjct: 61 NLILVAIFFTSNPANYSETQKQETSGKTKQKKTENIELKEAKKEEDKTKQKKTENREFKE 120
Query: 121 EEEEELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYN 176
+EE + EEEE+E+E+EEIGLSKEELNERVEAFIVMFKKQLISDAR+GGNR LSYN
Sbjct: 121 ARKEEDEIEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKGGNR---LSYN 176
BLAST of CmaCh15G002990 vs. ExPASy TrEMBL
Match:
A0A0A0KVE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633200 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 5.2e-40
Identity = 124/185 (67.03%), Postives = 149/185 (80.54%), Query Frame = 0
Query: 1 MWRAEESYRESKQ-AEVEDKDSIGTALLSAGTALLMAACLKR-AVVLFLVEQWRIWVFLL 60
MWR EE RE KQ E EDKDSI ALLSAGTALLMA CLK+ AVV+FLVEQWRIWVFL+
Sbjct: 1 MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLV 60
Query: 61 LNLILVAIFFTS---SPSSYSESQTQEANAKIKQKKIENRECKEAEKVE----KVEIKHQ 120
LNLILVAIFFTS +P++YSE+Q QE + K K KKIE RE +EA+K E + +I+++
Sbjct: 61 LNLILVAIFFTSNPANPANYSETQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKIENR 120
Query: 121 E-REKEEEEEELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRT 176
E +E +EE+E++EE+E +E+E+EEI LSKEELNERVEAFIVMFKKQLISDAR+GGNR
Sbjct: 121 EIKEAIKEEDEIKEEDEIEEEEEEEIELSKEELNERVEAFIVMFKKQLISDARKGGNR-- 180
BLAST of CmaCh15G002990 vs. ExPASy TrEMBL
Match:
A0A6J1JR04 (uncharacterized protein LOC111487056 OS=Cucurbita maxima OX=3661 GN=LOC111487056 PE=4 SV=1)
HSP 1 Score: 136.0 bits (341), Expect = 1.6e-28
Identity = 101/143 (70.63%), Postives = 110/143 (76.92%), Query Frame = 0
Query: 35 MAACLKRAVVL-FLVEQWRIWVFLLLNLILVAIFFTSSPSSYSESQTQEANAKIKQKKIE 94
MAACLKRAVVL FLVEQWRIWVFL+LNLILV IFFTSSP+SYSE+Q QE K+KKI
Sbjct: 1 MAACLKRAVVLFFLVEQWRIWVFLVLNLILVTIFFTSSPASYSENQIQEPT---KKKKIR 60
Query: 95 NRECKEAEKVEKVEIKHQEREKEEEEEELQEEEEEQEQEQEEIGLSKE------ELNERV 154
N E EKVE+VEIK QE KEEE EE ++E+EEIGLSKE ELNERV
Sbjct: 61 N---SEPEKVEEVEIKQQEIGKEEEIEE--------DEEEEEIGLSKEELNERVELNERV 120
Query: 155 EAFIVMFKKQLISDARRGGNRRT 171
EAFIVMFKKQLISDAR+ GNRRT
Sbjct: 121 EAFIVMFKKQLISDARKVGNRRT 129
BLAST of CmaCh15G002990 vs. NCBI nr
Match:
KAG6578611.1 (hypothetical protein SDJN03_23059, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 285.0 bits (728), Expect = 4.3e-73
Identity = 170/180 (94.44%), Postives = 174/180 (96.67%), Query Frame = 0
Query: 1 MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN
Sbjct: 1 MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
Query: 61 LILVAIFFT---SSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKVEIKHQEREKEE 120
LILVAIFFT SSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEK+EIKHQEREKEE
Sbjct: 61 LILVAIFFTSSPSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKLEIKHQEREKEE 120
Query: 121 EEEELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYNPQ 178
EEEE EEEE+E+E+EEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYNPQ
Sbjct: 121 EEEEELPEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYNPQ 180
BLAST of CmaCh15G002990 vs. NCBI nr
Match:
KAG7016160.1 (hypothetical protein SDJN02_21264, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 283.9 bits (725), Expect = 9.6e-73
Identity = 171/182 (93.96%), Postives = 176/182 (96.70%), Query Frame = 0
Query: 1 MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN
Sbjct: 1 MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
Query: 61 LILVAIFFT---SSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKVEIKHQEREKEE 120
LILVAIFFT SSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEK+EIKHQEREKEE
Sbjct: 61 LILVAIFFTSSPSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKLEIKHQEREKEE 120
Query: 121 EEEE--LQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYN 178
EEEE +EEEEE+E+E+EEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYN
Sbjct: 121 EEEEELPEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYN 180
BLAST of CmaCh15G002990 vs. NCBI nr
Match:
XP_022134128.1 (coiled-coil domain-containing glutamate-rich protein 1 [Momordica charantia])
HSP 1 Score: 219.9 bits (559), Expect = 1.7e-53
Identity = 136/178 (76.40%), Postives = 157/178 (88.20%), Query Frame = 0
Query: 1 MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
MW+AEE+YRE+KQ EVEDKDS+GT LLSAGTALLMAACLKRAVVLFLVEQWR+WVFL+LN
Sbjct: 1 MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60
Query: 61 LILVAIFFTSSPSSYSESQTQEANAKIKQKKIENRECKEA-EKVEKVEIKHQEREKEE-- 120
LI+VAIFFTSSPS+Y ES Q+ + KQKKI++RECK A EKVEKVE K QE +KEE
Sbjct: 61 LIVVAIFFTSSPSNYRES--QDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEI 120
Query: 121 EEEELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYN 176
EEEE++EEEEE+E+E ++GLSKEELNERVEAFIVMFK+QLI DAR+GGN TPLSYN
Sbjct: 121 EEEEIEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYN 176
BLAST of CmaCh15G002990 vs. NCBI nr
Match:
XP_038890929.1 (uncharacterized protein LOC120080357 [Benincasa hispida])
HSP 1 Score: 216.1 bits (549), Expect = 2.5e-52
Identity = 135/176 (76.70%), Postives = 149/176 (84.66%), Query Frame = 0
Query: 1 MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
MWRAEESYRE KQ EVEDKDSIG LLSAGTALLMAACLK+AVV+FLVEQWRIWVFL+LN
Sbjct: 1 MWRAEESYRELKQGEVEDKDSIGNVLLSAGTALLMAACLKKAVVMFLVEQWRIWVFLVLN 60
Query: 61 LILVAIFFTSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKVEIKHQEREKEEEEE 120
LILVAIFFTSSP+SYSE+Q +EA KQKKI+NRE KEAEK E +EEE
Sbjct: 61 LILVAIFFTSSPASYSENQNEEA----KQKKIKNRELKEAEKTE-----------IKEEE 120
Query: 121 ELQEEE-EEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYN 176
E++EEE EE+E+E+EEIGLSKEELNERVEAFIVMFKKQLISDAR+G NR TP SYN
Sbjct: 121 EIEEEEIEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKGRNRSTPFSYN 161
BLAST of CmaCh15G002990 vs. NCBI nr
Match:
XP_022959957.1 (uncharacterized protein LOC111460852 [Cucurbita moschata] >KAG6602469.1 hypothetical protein SDJN03_07702, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033143.1 hypothetical protein SDJN02_07196, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 195.3 bits (495), Expect = 4.5e-46
Identity = 130/178 (73.03%), Postives = 141/178 (79.21%), Query Frame = 0
Query: 1 MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVL-FLVEQWRIWVFLLL 60
MWRAEE RESKQ EVEDKD +LSAGTALLMAACLKRAVVL FLVEQWRIWVFL L
Sbjct: 1 MWRAEEGCRESKQGEVEDKDCTSRGVLSAGTALLMAACLKRAVVLFFLVEQWRIWVFLAL 60
Query: 61 NLILVAIFFTSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKVEIKHQEREKEEEE 120
NLILV IFFTSSP+SYSESQTQE K+KKI + E EKVE+VEIK QE +KEEE
Sbjct: 61 NLILVTIFFTSSPASYSESQTQEPT---KKKKIRS---SEPEKVEEVEIKQQEMDKEEEI 120
Query: 121 EELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSYNPQ 178
EE ++E+E IGLSKEELNERVEAFIVMFKKQLISDAR+ G+RRTPLSY Q
Sbjct: 121 EE--------DEEEEVIGLSKEELNERVEAFIVMFKKQLISDARKVGSRRTPLSYKTQ 164
BLAST of CmaCh15G002990 vs. TAIR 10
Match:
AT3G28420.1 (Putative membrane lipoprotein )
HSP 1 Score: 52.8 bits (125), Expect = 3.4e-07
Identity = 68/193 (35.23%), Postives = 103/193 (53.37%), Query Frame = 0
Query: 18 DKDSIGTALLSAGTALLMAACLKR-AVVLFLVEQWRIWVFLLLNLILVAIFFTSSPSSYS 77
+++++ T+LL+A L M ACLK + V +L+EQWR VFL+LN++L+A++FTS+ +
Sbjct: 10 EEENMCTSLLTAVVVLSM-ACLKHFSSVSYLIEQWRSLVFLILNVVLLAVYFTSTRPNLG 69
Query: 78 ES------------QTQEANAKIKQKK----------------IENRE----CKEAEKVE 137
S +E KIK+KK +E +E C E+ +
Sbjct: 70 RSHDFKTRRGGRLRMMREKKNKIKKKKTRVVVEPACFDQGFLLVEPKEVIKKCVLVEETK 129
Query: 138 KVEIKHQEREKEEEEEELQEEEEEQEQEQEEIGLSKEELNERVEAFIVMFKKQLISDARR 178
+V K +E K+ + + E +E E E LS EELNERVEAFI F++ L+ DARR
Sbjct: 130 RVCPKFEETVKDCLFHKKEIEYNGEEDEFEPGRLSNEELNERVEAFITTFRQHLVLDARR 189
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1C149 | 8.3e-54 | 76.40 | coiled-coil domain-containing glutamate-rich protein 1 OS=Momordica charantia OX... | [more] |
A0A6J1H605 | 2.2e-46 | 73.03 | uncharacterized protein LOC111460852 OS=Cucurbita moschata OX=3662 GN=LOC1114608... | [more] |
A0A1S3C9Q4 | 2.0e-44 | 72.07 | ABC transporter F family member 4 OS=Cucumis melo OX=3656 GN=LOC103498035 PE=4 S... | [more] |
A0A0A0KVE3 | 5.2e-40 | 67.03 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633200 PE=4 SV=1 | [more] |
A0A6J1JR04 | 1.6e-28 | 70.63 | uncharacterized protein LOC111487056 OS=Cucurbita maxima OX=3661 GN=LOC111487056... | [more] |
Match Name | E-value | Identity | Description | |
KAG6578611.1 | 4.3e-73 | 94.44 | hypothetical protein SDJN03_23059, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7016160.1 | 9.6e-73 | 93.96 | hypothetical protein SDJN02_21264, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022134128.1 | 1.7e-53 | 76.40 | coiled-coil domain-containing glutamate-rich protein 1 [Momordica charantia] | [more] |
XP_038890929.1 | 2.5e-52 | 76.70 | uncharacterized protein LOC120080357 [Benincasa hispida] | [more] |
XP_022959957.1 | 4.5e-46 | 73.03 | uncharacterized protein LOC111460852 [Cucurbita moschata] >KAG6602469.1 hypothet... | [more] |
Match Name | E-value | Identity | Description | |
AT3G28420.1 | 3.4e-07 | 35.23 | Putative membrane lipoprotein | [more] |