CmaCh15G001790 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G001790
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	thioredoxin H-type-like
Location	Cma_Chr15: 819699 .. 823478 (-)
RNA-Seq Expression	CmaCh15G001790
Synteny	CmaCh15G001790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTTGATCTGTATTCTGATCCCTCGCCGCAAAAATTGGCTTGTTCTTCTCGATAATTTTCCCTCTGCTCTCACATTCCTTGTTCTCCTTCAACCAATGCATTTCAGCCTTAATTAGAAGTTTTTTTCTCGAAATTTTCGTTTTCGTCTTCGTCCTCTTCCTTCTCTAGGCGCTGCTTCTCCTGAAATCTCAGGATCGGCTTCAATGATGAGTTGTACAAGATGCTGAATCAACGCTATCCCAAGGTAATGATGATCTGTCCATGTTTTCGCACTTCTTTTGGTTCTGGTAGTCGAGATTCTTTGTATGGAGAGAATAGGGAGGTGTATTGATTCGATTAAATCTAAAATTCGTAAATATGATAATTCCTTTGCGCTCATTGATAATGATCCATGCGTATTGTTTTTCTTATATGTTTTTGCTCTCTCTGATTCCGTATCCTTTGTTGAATATCTGCGTCTCATATTTGCTTCTGAGGTGCAATGAAATCTCTGCTTTGATGCATTGAGGTGCAATGAAATCTCTGCTTTGATGCTATGCGGCCATTGCCGTGATGGATTCCCCAGTTTTCTCTGTAAATTTCAAAGAGAGACCGTTTTGTTAATACTTGAGAGCTGTTTTGGAAACGGTTCTTTTTCGTATTTATTTCCAAAGTTAGTTTTAGGATTGTGATTTGAAAGATTTATAGGAACTAATGCATTGACATCGAGATCTCTATCCGTGATTTTGGAGGATAACTTTATTTTATTTTTGTAAAACCGACCATTTCTGAAAACACACTTTACGAAAAGAAGAAAAGCAATTTTGAGAAATAGTTAACGAACATGATTGTTTCATACTTTTTCCTTCAAACAAGAGGAATGTTAACTAACAGTTTCGGGATGATCCATTGGTTTCAGTTTCTCATCACCATTTCATTAATAGATAAAAGAGAAGGTAGTTTTTATCTTTCAAGTCTATTAGAACAAAAATAGTTAACAGGCATAAAACCTGTACAATCAACCTAAAATGTTTGAATCTCTCACCTTACATATTATTGAATTATATATATATATATATATCATACATATTCTTTGTTCCATATCTTTGTTTCCATGAAAAAAATGAGAGTTAATTCGAAATTGTTTCTTGTGAAGTTCAGGTTTTAGAATTAGGCCTGAGATACGAGAAACAAAAAAAAATGTCATTTCTCCTTTGAAAGATTTGCTCAATTGGTTACCTCCTAAAGAAGGAAGAAAATCCTTCGACTTTGTTGAACTGAAAAAAAAAAAAAAATGTAACTATTATAATGACAACAACGGATGCATCAACTGCTAGGACATCTTCCTCCTTTCGCCATCCTTTCACGTCTTAAGGCCACGGTCCAAAAAATTATTGGTTTGACTTGACTTCATTCTCTAGTTTAAAATCGGTGTGCAAAGAGAATGGGAACATGACTTTTGCTATTTGATGTTTCCATGTTTAGGATTTCATGATCTTGCATTAGATACCAATATATTTTTGTTTCTTGCTCGAGCTTAGTAAAGGCATACTTTGTTTGAGTTTGAAGGTATGTTACCTTTCTTGCGAGGTTAGTTTATGAATGACTAATTCGTTGGATTTTAATTCAAAAATAGATATCTTATGAATGGGAATCTACCTATGCCCTCCTTGTCTCATCTTAAAGAATTTTTATCATATAGGGCTAGAACAAAAATGACAATTGCACAAAGTAAAAGGAAAAAGAAGTTCAAAATAGAGTTTCGTGAAAACTTGAGCAAAGTGTAAGGCTTTTTTCTTCAAGTTTCCAGTGCAACTGATTGCAGGTTCCATTGGAAAATGAATTAAGATCTAATCTTACATGTATTCTCGACTGATACATATCATGCAACTTAACAGGTGTCCTGTTTGGAAACGACCTTAATTTTTTCAGACAGAGATTCGATTTTGCATTTTCAATGGGAAGCTGCTGGACTAAGGTAGGCCTCGCTGGCAATTTATCTTTTATATTATGTTTTCAAGGTCTTGATTTCTCGTATAGTGTTCTCTGCTTTATTTTGTTTGCTAGCCTCGCAGTTTCTGGCATGCCTTTTGTACATTTTATTTTTATTCATCAAGTTCATGGTCATCATGGGTCCACATAACCAAGTGGAGGTTTGAAAATAGCACTTCGCTTCTGTAAATTCTTACTTGTTCAGAATCATAAGAGCCCACTAAATTTTCAGAGGATCAAATTTTCTCTCTTTCAAATATCATAATATCTGAACTCTCTCTTTCACATAGATTTTTTAAATAAATCTACTTTAAAGAGATTTATCCTGAAAATTTTATTCGAAGTTCCACTGCGCTATGTCTGCTAATGGTCAGTATTGACTTATTCCACTTTCCCTCATTTACATGATCAATGTTAGAACCTTAGATGATAGTGTTACAGTGGTAGTACCCAAGTTCTCATCCTTAAGACCCATCCTCTGAAAAATTATTGGACATGAACATGATCGTATTCTAATTATTAGATGTCTGATTAAACCATACTTTTTAAGCTCTGTGTCATATCTCCAACGGGATAATGGTAAATGATTCTGTTTCAACCTAATCAAATAATTTTTCCATCTACTGAGTTACATCCACACTTGACATTTTGCAGCTTTTCAATAGCGATCAGAAAGACAATGCCGTCAAGGAGCAAGTTGATAGCAAAAACGTACACCTCATTACGTCGATTGAGAAGTGGGAGGCGAAGCTTTCGGAAGCAACCAAAGATGGCAAGATTGTAAGTTTCTCCCTCACTTGTTCGTGGTGAACAAAAATATACAGTGTTTTATGTTTAAACTATGCAACAGGTTGTTGCAAATTTCAGTGCACCATGGTGTAGACCTTGTAAATCCATGACACCAGCATTTTGTGAGCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCCATTGACGTCGACGAGCTAGCTGTGAGTAAATCCATCTTTTGGTTACTTTTCGTTTATTTATGTAAATGTGAATATGAATCTAGCTAGCTCTCCACTGACGGAGTGTTCTTATCCATGACCTCACACTTTCATTTTTACAGTTTGTATGGCTTTTGTTTCTTATTTCTTCACTCTCATTTTCTGTTTTTCGTTCGTTTGTTTGTTTCTTGTTTTTGGAAAAAGAAACATAAGAATTATTTCTTGATTTTTGTTTTTTTTTATTGTATATAGTTGTGTTTGGTAACTATTTTTTAATTTTATCCTCTAAAATTTCAAAATTATCATGTTATATTTGATTTTTGATGTAGTAAACATTTTTTTTTAATAAGAAATGATAAATTAGTATGTGTTTAAAAACTATAAACAAGAAATATGATACTAGAAACTATAAACAAAAAACTAATTTGGGGAATTTTCTTCTGTTTTTCTTTTCCTCTTTATTAAAGTTAAACTAGAGTGATTTTGATTGGTGGACGACATATATTTTAATTTATTGAGTTGTGAAAAAAAAAAAAAAAAAAGAATCAAAGAATTGAAAACATTACAAAAAGTGTCCTAAATCCTAATTTAAATTGATAATGGTATAGTTTATTGTATAGTACGGTGAGTTTTAGAAGTTTCTTAGACTGAGGTCGGGTGAGGTGGGGTTTTTTAATTTTAATTTTATTTATTTTGCAGGAGCTCAGTAAATCGTGGGACATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAATAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAGCTGCAATGGACGAGGCTTGA

mRNA sequence

ATGGAGGTTGATCTACAGAGATTCGATTTTGCATTTTCAATGGGAAGCTGCTGGACTAAGCTTTTCAATAGCGATCAGAAAGACAATGCCGTCAAGGAGCAAGTTGATAGCAAAAACGTACACCTCATTACGTCGATTGAGAAGTGGGAGGCGAAGCTTTCGGAAGCAACCAAAGATGGCAAGATTGTTGTTGCAAATTTCAGTGCACCATGGTGTAGACCTTGTAAATCCATGACACCAGCATTTTGTGAGCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCCATTGACGTCGACGAGCTAGCTGAGCTCAGTAAATCGTGGGACATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAATAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAGCTGCAATGGACGAGGCTTGA

Coding sequence (CDS)

ATGGAGGTTGATCTACAGAGATTCGATTTTGCATTTTCAATGGGAAGCTGCTGGACTAAGCTTTTCAATAGCGATCAGAAAGACAATGCCGTCAAGGAGCAAGTTGATAGCAAAAACGTACACCTCATTACGTCGATTGAGAAGTGGGAGGCGAAGCTTTCGGAAGCAACCAAAGATGGCAAGATTGTTGTTGCAAATTTCAGTGCACCATGGTGTAGACCTTGTAAATCCATGACACCAGCATTTTGTGAGCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCCATTGACGTCGACGAGCTAGCTGAGCTCAGTAAATCGTGGGACATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAATAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAGCTGCAATGGACGAGGCTTGA

Protein sequence

MEVDLQRFDFAFSMGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCRPCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGADKSDLQQKIAAMDEA

Homology

[Close]

BLAST of CmaCh15G001790 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 5.6e-37
Identity = 73/131 (55.73%), Postives = 98/131 (74.81%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MG C  K  N D  D+    ++   NVHLIT+ E+W+ KLSEA++DGKIV+ANFSA WC 
Sbjct: 1   MGLCLAKR-NHDADDDEPHIELAGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCG 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PCK + P + EL++ Y S++FL IDVDEL++ S SW+IKATPTF F +DG+QVDKL+GA+
Sbjct: 61  PCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGAN 120

Query: 134 KSDLQQKIAAM 145
           K +L +KI A+
Sbjct: 121 KPELHKKITAI 130

[Close]

BLAST of CmaCh15G001790 vs. ExPASy Swiss-Prot
Match: Q9C9Y6 (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 4.8e-36
Identity = 71/131 (54.20%), Postives = 98/131 (74.81%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MGSC +K    D  D+    +    NVHLIT+ E W+ KL+EA +DGKIVVANFSA WC 
Sbjct: 1   MGSCVSKGKGDD--DSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCG 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PCK + P F EL++K++S++FL +DVDEL++ S SWDIKATPTF F K+G+Q+ KL+GA+
Sbjct: 61  PCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 120

Query: 134 KSDLQQKIAAM 145
           K +LQ+K+ ++
Sbjct: 121 KPELQKKVTSI 129

[Close]

BLAST of CmaCh15G001790 vs. ExPASy Swiss-Prot
Match: Q9AS75 (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.6e-34
Identity = 67/134 (50.00%), Postives = 94/134 (70.15%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MGSC  K    ++ D   K      NVH+I++ E W+ K++EA KDGKIV+ANFSA WC 
Sbjct: 1   MGSCVGK----ERSDEEDKIDFKGGNVHVISNKENWDHKIAEANKDGKIVIANFSAAWCG 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PC+ + P + E++  Y   +FL IDVDEL + S SWDI+ATPTF F K+G QVDKL+GA+
Sbjct: 61  PCRVIAPVYAEMSQTYPQFMFLTIDVDELMDFSSSWDIRATPTFFFLKNGEQVDKLVGAN 120

Query: 134 KSDLQQKIAAMDEA 148
           K +L++K+AA+ ++
Sbjct: 121 KPELEKKVAALADS 130

[Close]

BLAST of CmaCh15G001790 vs. ExPASy Swiss-Prot
Match: Q9LXZ8 (Putative thioredoxin H10 OS=Arabidopsis thaliana OX=3702 GN=At3g56420 PE=3 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 7.6e-34
Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 0


Query: 16  SCWTKLF--------NSDQKDNAVKEQVDSK-NVHLITSIEKWEAKLSEATKDGKIVVAN 75
           SC  KL+        N++      + Q  SK  VH ++ IEKWE K++EA   GKI+V N
Sbjct: 9   SCCRKLWSCICCCSNNNNNSYGQTRSQHGSKGKVHPVSRIEKWEEKITEANNHGKILVVN 68

Query: 76  FSAPWCRPCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQV 135
           FSAPWC PCK + P F +LA +Y SM+F+ +DV+ELAE S  W+++ATPT VF KDGRQ+
Sbjct: 69  FSAPWCVPCKKIEPVFRDLASRYPSMIFVTVDVEELAEFSNEWNVEATPTVVFLKDGRQM 128

Query: 136 DKLIGADKSDLQQKIAA 144
           DKL+GA+ S+LQ+K AA
Sbjct: 129 DKLVGAETSELQKKTAA 145

[Close]

BLAST of CmaCh15G001790 vs. ExPASy Swiss-Prot
Match: Q0DKF1 (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.4e-32
Identity = 66/131 (50.38%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MG C  K     ++D   K      NVH+ITS E W+ K+ EA KDGKIVVANFSA WC 
Sbjct: 1   MGGCVGKGRRHIEED---KLDFKGGNVHVITSKEDWDRKIEEANKDGKIVVANFSASWCG 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PC+ + P + E++  Y  ++FL IDVD+L + S SWDI+ATPTF F K+ +QVDKL+GA+
Sbjct: 61  PCRVIAPIYAEMSKTYPQLMFLTIDVDDLMDFSSSWDIRATPTFFFIKNEKQVDKLVGAN 120

Query: 134 KSDLQQKIAAM 145
           K +L++K+ A+
Sbjct: 121 KPELEKKVQAL 128

[Close]

BLAST of CmaCh15G001790 vs. ExPASy TrEMBL
Match: A0A6J1JRL7 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111489170 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.8e-70
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR
Sbjct: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD
Sbjct: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120

Query: 134 KSDLQQKIAAMDEA 148
           KSDLQQKIAAMDEA
Sbjct: 121 KSDLQQKIAAMDEA 134

[Close]

BLAST of CmaCh15G001790 vs. ExPASy TrEMBL
Match: A0A6J1FG71 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111445124 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.8e-70
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR
Sbjct: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD
Sbjct: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120

Query: 134 KSDLQQKIAAMDEA 148
           KSDLQQKIAAMDEA
Sbjct: 121 KSDLQQKIAAMDEA 134

[Close]

BLAST of CmaCh15G001790 vs. ExPASy TrEMBL
Match: A0A0A0KUM3 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G645140 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.6e-61
Identity = 117/134 (87.31%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MG+CWTKLFNS Q+D A  + VDSKNVHLITS+EKWEAKL EAT+DGKIV+ANFSA WCR
Sbjct: 1   MGNCWTKLFNSGQEDYAEVQNVDSKNVHLITSMEKWEAKLLEATEDGKIVIANFSAHWCR 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PCKSMTPA+CELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKL+GAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 134 KSDLQQKIAAMDEA 148
           KSDLQQKIAAMDE+
Sbjct: 121 KSDLQQKIAAMDES 134

[Close]

BLAST of CmaCh15G001790 vs. ExPASy TrEMBL
Match: A0A1S3CBI4 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103498606 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.3e-60
Identity = 116/134 (86.57%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MG+CWTKLFNS Q+D    + VDSKNVHLITS+EKWEAKL EAT+DGKIV+ANFSA WCR
Sbjct: 1   MGNCWTKLFNSAQEDYREVQNVDSKNVHLITSMEKWEAKLLEATQDGKIVIANFSAHWCR 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PCKSMTPA+CELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKL+GAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 134 KSDLQQKIAAMDEA 148
           KSDLQQKIAAMDE+
Sbjct: 121 KSDLQQKIAAMDES 134

[Close]

BLAST of CmaCh15G001790 vs. ExPASy TrEMBL
Match: A0A6J1JH67 (thioredoxin H4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111486972 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.1e-59
Identity = 114/134 (85.07%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MG+CWTK+F+SDQ+D A  + VDSKNVHLI S+EKWEAKL EAT+DGKIV+ANFSA W R
Sbjct: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PCKSMTPA+CELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKL+GAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 134 KSDLQQKIAAMDEA 148
           KSDLQQKI AMDE+
Sbjct: 121 KSDLQQKITAMDES 134

[Close]

BLAST of CmaCh15G001790 vs. NCBI nr
Match: XP_022939124.1 (thioredoxin H-type-like [Cucurbita moschata] >XP_022993027.1 thioredoxin H-type-like [Cucurbita maxima] >XP_022993028.1 thioredoxin H-type-like [Cucurbita maxima] >XP_023551106.1 thioredoxin H-type-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551107.1 thioredoxin H-type-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6578492.1 hypothetical protein SDJN03_22940, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016057.1 hypothetical protein SDJN02_21161 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275.0 bits (702), Expect = 3.7e-70
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR
Sbjct: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD
Sbjct: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120

Query: 134 KSDLQQKIAAMDEA 148
           KSDLQQKIAAMDEA
Sbjct: 121 KSDLQQKIAAMDEA 134

[Close]

BLAST of CmaCh15G001790 vs. NCBI nr
Match: XP_023551108.1 (thioredoxin H-type-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.3 bits (656), Expect = 8.0e-65
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 21  LFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCRPCKSMTP 80
           LFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCRPCKSMTP
Sbjct: 2   LFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCRPCKSMTP 61

Query: 81  AFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGADKSDLQQK 140
           AFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGADKSDLQQK
Sbjct: 62  AFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGADKSDLQQK 121

Query: 141 IAAMDEA 148
           IAAMDEA
Sbjct: 122 IAAMDEA 128

[Close]

BLAST of CmaCh15G001790 vs. NCBI nr
Match: XP_038890472.1 (thioredoxin H4-1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 247.3 bits (630), Expect = 8.3e-62
Identity = 118/134 (88.06%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MG+CWTK FNS Q+D A  + VDSKNVHLITS+EKWEAKL EATKDGKIV+ANFSAPWCR
Sbjct: 1   MGNCWTKFFNSVQEDYAEVQNVDSKNVHLITSMEKWEAKLLEATKDGKIVIANFSAPWCR 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PCKSMTPA+CELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKL+GAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 134 KSDLQQKIAAMDEA 148
           KSDLQQKIAAMDE+
Sbjct: 121 KSDLQQKIAAMDES 134

[Close]

BLAST of CmaCh15G001790 vs. NCBI nr
Match: XP_004141512.2 (thioredoxin H4-1 isoform X1 [Cucumis sativus] >KGN52589.1 hypothetical protein Csa_008226 [Cucumis sativus])

HSP 1 Score: 244.6 bits (623), Expect = 5.4e-61
Identity = 117/134 (87.31%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MG+CWTKLFNS Q+D A  + VDSKNVHLITS+EKWEAKL EAT+DGKIV+ANFSA WCR
Sbjct: 1   MGNCWTKLFNSGQEDYAEVQNVDSKNVHLITSMEKWEAKLLEATEDGKIVIANFSAHWCR 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PCKSMTPA+CELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKL+GAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 134 KSDLQQKIAAMDEA 148
           KSDLQQKIAAMDE+
Sbjct: 121 KSDLQQKIAAMDES 134

[Close]

BLAST of CmaCh15G001790 vs. NCBI nr
Match: XP_008459484.1 (PREDICTED: thioredoxin H-type [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 2.7e-60
Identity = 116/134 (86.57%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MG+CWTKLFNS Q+D    + VDSKNVHLITS+EKWEAKL EAT+DGKIV+ANFSA WCR
Sbjct: 1   MGNCWTKLFNSAQEDYREVQNVDSKNVHLITSMEKWEAKLLEATQDGKIVIANFSAHWCR 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PCKSMTPA+CELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKL+GAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 134 KSDLQQKIAAMDEA 148
           KSDLQQKIAAMDE+
Sbjct: 121 KSDLQQKIAAMDES 134

[Close]

BLAST of CmaCh15G001790 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 )

HSP 1 Score: 152.1 bits (383), Expect = 3.4e-37
Identity = 71/131 (54.20%), Postives = 98/131 (74.81%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MGSC +K    D  D+    +    NVHLIT+ E W+ KL+EA +DGKIVVANFSA WC 
Sbjct: 1   MGSCVSKGKGDD--DSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCG 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PCK + P F EL++K++S++FL +DVDEL++ S SWDIKATPTF F K+G+Q+ KL+GA+
Sbjct: 61  PCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 120

Query: 134 KSDLQQKIAAM 145
           K +LQ+K+ ++
Sbjct: 121 KPELQKKVTSI 129

[Close]

BLAST of CmaCh15G001790 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 )

HSP 1 Score: 152.1 bits (383), Expect = 3.4e-37
Identity = 71/131 (54.20%), Postives = 98/131 (74.81%), Query Frame = 0


Query: 14  MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 73
           MGSC +K    D  D+    +    NVHLIT+ E W+ KL+EA +DGKIVVANFSA WC 
Sbjct: 1   MGSCVSKGKGDD--DSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCG 60

Query: 74  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 133
           PCK + P F EL++K++S++FL +DVDEL++ S SWDIKATPTF F K+G+Q+ KL+GA+
Sbjct: 61  PCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 120

Query: 134 KSDLQQKIAAM 145
           K +LQ+K+ ++
Sbjct: 121 KPELQKKVTSI 129

[Close]

BLAST of CmaCh15G001790 vs. TAIR 10
Match: AT3G56420.1 (Thioredoxin superfamily protein )

HSP 1 Score: 144.8 bits (364), Expect = 5.4e-35
Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 0


Query: 16  SCWTKLF--------NSDQKDNAVKEQVDSK-NVHLITSIEKWEAKLSEATKDGKIVVAN 75
           SC  KL+        N++      + Q  SK  VH ++ IEKWE K++EA   GKI+V N
Sbjct: 9   SCCRKLWSCICCCSNNNNNSYGQTRSQHGSKGKVHPVSRIEKWEEKITEANNHGKILVVN 68

Query: 76  FSAPWCRPCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQV 135
           FSAPWC PCK + P F +LA +Y SM+F+ +DV+ELAE S  W+++ATPT VF KDGRQ+
Sbjct: 69  FSAPWCVPCKKIEPVFRDLASRYPSMIFVTVDVEELAEFSNEWNVEATPTVVFLKDGRQM 128

Query: 136 DKLIGADKSDLQQKIAA 144
           DKL+GA+ S+LQ+K AA
Sbjct: 129 DKLVGAETSELQKKTAA 145

[Close]

BLAST of CmaCh15G001790 vs. TAIR 10
Match: AT2G40790.1 (C-terminal cysteine residue is changed to a serine 2 )

HSP 1 Score: 133.3 bits (334), Expect = 1.6e-31
Identity = 59/104 (56.73%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 40  VHLITSIEKWEAKLSEATKDGKIVVANFSAPWCRPCKSMTPAFCELADKYTSMVFLAIDV 99
           VH ++ +EKWE K++EA   GKI+V NF A WC P K++ P + ELA  YTSM+F+ IDV
Sbjct: 42  VHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELASTYTSMIFVTIDV 101

Query: 100 DELAELSKSWDIKATPTFVFFKDGRQVDKLIGADKSDLQQKIAA 144
           +ELAE S  W++ ATPT VF KDGRQ+DKL+G D ++LQ+K AA
Sbjct: 102 EELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGDAAELQKKTAA 145

[Close]

BLAST of CmaCh15G001790 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 103.2 bits (256), Expect = 1.8e-22
Identity = 44/118 (37.29%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 25  DQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCRPCKSMTPAFCE 84
           + ++   +  ++   V  I S  + EAK   A K  ++++  F+A WC PC+ M+P +  
Sbjct: 257 EAQEREAQAALNDGEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSN 316

Query: 85  LADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGADKSDLQQKIA 143
           LA +++ +VFL +D+D+  +++ SW+I + PTF F +DG++VDK++GADK  L+QKIA
Sbjct: 317 LATQHSRVVFLKVDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQKIA 374

The following BLAST results are available for this feature:

BLAST of CmaCh15G001790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P85801	5.6e-37	55.73	Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1	[more]
Q9C9Y6	4.8e-36	54.20	Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1	[more]
Q9AS75	2.6e-34	50.00	Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 S...	[more]
Q9LXZ8	7.6e-34	51.09	Putative thioredoxin H10 OS=Arabidopsis thaliana OX=3702 GN=At3g56420 PE=3 SV=2	[more]
Q0DKF1	2.4e-32	50.38	Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 S...	[more]

BLAST of CmaCh15G001790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRL7	1.8e-70	100.00	thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111489170 PE=4 SV=1	[more]
A0A6J1FG71	1.8e-70	100.00	thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111445124 PE=4 SV=1	[more]
A0A0A0KUM3	2.6e-61	87.31	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G645140...	[more]
A0A1S3CBI4	1.3e-60	86.57	thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103498606 PE=4 SV=1	[more]
A0A6J1JH67	1.1e-59	85.07	thioredoxin H4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111486972 PE=4 SV=1	[more]

BLAST of CmaCh15G001790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939124.1	3.7e-70	100.00	thioredoxin H-type-like [Cucurbita moschata] >XP_022993027.1 thioredoxin H-type-...	[more]
XP_023551108.1	8.0e-65	100.00	thioredoxin H-type-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_038890472.1	8.3e-62	88.06	thioredoxin H4-1-like isoform X2 [Benincasa hispida]	[more]
XP_004141512.2	5.4e-61	87.31	thioredoxin H4-1 isoform X1 [Cucumis sativus] >KGN52589.1 hypothetical protein C...	[more]
XP_008459484.1	2.7e-60	86.57	PREDICTED: thioredoxin H-type [Cucumis melo]	[more]

BLAST of CmaCh15G001790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08710.1	3.4e-37	54.20	thioredoxin H-type 9	[more]
AT3G08710.2	3.4e-37	54.20	thioredoxin H-type 9	[more]
AT3G56420.1	5.4e-35	51.09	Thioredoxin superfamily protein	[more]
AT2G40790.1	1.6e-31	56.73	C-terminal cysteine residue is changed to a serine 2	[more]
AT3G17880.1	1.8e-22	37.29	tetraticopeptide domain-containing thioredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 63..71 score: 50.0 coord: 71..80 score: 52.61 coord: 110..121 score: 36.85
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 14..146 e-value: 2.0E-41 score: 142.8
None	No IPR available	PANTHER	PTHR10438:SF394	THIOREDOXIN-LIKE PROTEIN CXXS2-RELATED	coord: 16..146
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 16..146
None	No IPR available	CDD	cd02947	TRX_family	coord: 53..142 e-value: 1.64461E-31 score: 106.488
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 47..142 e-value: 9.0E-23 score: 80.2
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 21..147 score: 13.832144
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 34..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G001790.1	CmaCh15G001790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
cellular_component	GO:0016020	membrane