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CmaCh15G001710 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCATCCTCGCTTGTGTTGGTAACCGACATGTCGTAACTGGACTGGGTCGCTTGGATGACAGTGTCAGAGGGACCAACGACATGTAGTGCATGCTTTAAGGGCAAAAAAGGTAACATTTCCCCTTTTTCGTTTTATTTTTTCCTCTACTGCAGACTACCGCCTTTTTGTTTTTTTTTTTTGTCTAAAAATTCATAAAATAAATGACACGTGTAATTTTCTAAAAATATTAAAATTTGATAATTTTCCGAAAAAGAAAGAGTATAATTTGTCAGTCGTATTTAATTTTTAAATCATATAATATCAATTAAAAGAAGAGAAAAAAAATGCCAACGAAATTCTCGTACTTTAATAATAAAGAAAAGTCAAAGTTAACAGAGCAGTTAAATCATAAAAAACGGAAAAAAAAAAAAAAAGGTAGGCGAAATATTTAAAGTGGTGGGGCCCGAGGGAACTCGAACGGCGTGAGGAAACGGCGTGCAATTGACGCCGACAGCCTGGTACGCCGTTTAGCGTTCCCCGAAAAGGGTATGCTAATTCCAAGGGCTAACAGAAACAGAATGTGGAGAATGTGATGTGTAAGTGGGCCGGGTCGGGTGGAGTTGGATAATCTATGGGTATACTACCCATAATCGAATAAGTGGTGAGAAATGTTTATATTTTAAATAAAATAAAATATCCTGTAAATACAGGGAAAATTTAATTTTTAAATAATTTTAAAAATCCTATATATTCTCACGAGGCAGCAAAACTCCGGACAAGAAGACGACAAACCAATTCACGGTTGGCTTTTACTTTTCTTACCATTGGCGTGTTAAAAAACGTGCCAGCAATAATATCCCACTCCTATCTAAATTTAATATAATAAAATATATTACATTTTTTGTTAATAAAAAATATCCAAAAATATATAATCCTGTTAATAAAAATATTATTACCACGAACAAATATTTATTAGGCATGTATATAATTGAATTATTAATTTATCTCTGCACAAAATAAATTCAATCAGTTGAAAATATAAATTATATTATTATGGACCGAGCTATATTGATAATGGTCAACTTCACGTATTTTAAATATAAAAGTTCATATAGAATTTTTATGTACGATGGGTTCCAACACATGCATTCAATTTTTTTTGTCTTTTAACTCGTTAAGATTAGGTCAATACAGTTCTAAAATATTTAAAAATTCATCATTTTATTAAATTATTGATTTTTTTTTTTTGTTTTTTTTGTTTTTTTTTTGTTTTTTTGTTTTTCTGGTTGTCATATTTGTATACCTTTAACTGTTCCAAGAAAATGGCTACAAAAAGTAGTATTTCTATGTCGAGCCTGGAGGTTCAAATAGTTGGGCCGCTCAAGATAAATGGGCCTAGATTAGGATCTGGGGCTCGGGTTGCGATCCGCTATAGGCCCATATATTCAAGCGACCTTAATTGTCCCATGTTTCATCGTGAATCTGTTCATATATATTGAAAAGTTAAATGACTATTTTGCCCTCTTACAATGTAAGAAAAAGAATAGAATGGAGAAGACTATTGTCAATCAATCACGATGACACGTGGAGCATTCTGATTTTGAAAAGGTGAAGTCCACCTCATCAGAAGAATCCGACGGTCAAAAATTGATTCCCGATTGATATGGTGGCTAGAACCGAATCCTTCTTATAAAAACTTCATGGATTTTGTATTAGGTTTACCATCAGAATTGGAAGAGGAATTCAGAGAGAAAAAATGGCAGGTGAATCAACTTTGTTCAAGTTCTTGAGCCCGGGACGCCGTTTCCAATCCACGGACATCCAAGCCGCCGCCGGCTGGGGTGTCGCCGCTGCCACAACTGCTCTATGGGTCGTTCAGGTTTTTTCCTTTCCTAAATTCATTGATCTGTACTATTATTTCTGGTTTTCGGAGATTTATGTAGTGGATCTTTTGACTCTCTATGTTAGAATAAAGGATGCATCGATCTTCTTGAAAGTTGATTCTTGATTCCGTTAACGATTTCTATTTCTAGTCTTGGACGATTTACCGTAGCGTATTTGTTATTTCTATTTTCACAATTTATCTTTGACTTACTTTGCCACCAGCGTTAATTTTGGTTACGGGATTAGATATCATTTTCAGCTGGCCATTCGTAGTTGAGATCTGGAAGAAATGTATTCCTATGAACTATGGTGTCTATGGGCAATACATATCGTGAGGATCTGAGAGAGCTATTTATTTATTTATTTATTTATATTTGTTTTCTCTTACTATTTTCTTCTCTTTCGTCATTGATCGAGCACAAGATTATACTGGCCCTGTCGGAACTCTTTTTGAATTATCAAGCTTCTCATGGTTTCTGCACACTGTGTTTTCGAAAAGCATAGTTGTATGTATATCTGTGTGTTCGGTAATCATTTCTTATTTTTCTCTCTAGTATGAAGCAAATTGAAAACAAAGATTAGGAGATTTATTTTCTCTTCCACGTTCAAAATATTCTCCGATGGGAACAGAATGAAGTAACCATAAATGCCGCCAAAGACATGCCCGTTCCTAGAATGACAACATTTGGATGTAGTTGCTTTACGTTGAATGTCACAATATAGATCTTGTTCAAGTAAAGTCGTATCTCTCTATATAAAACACCATTTAGGCCTTGAATCTCTCGCGTTTCTAAAAATTTGTAGTAGGTCATTATCTGTGGCTCGACGTCTTGCCATCCCCATGATCATACTCTCTGGTTCCACATTGAAAGTTTGGTATACTTCCGAATCCAGTCCCAAGTTCAATTTACTTCAATGTTATGGAGCTTTTAGCAGCTACTCACGGAGGCTGGCGATCCTACCTGTGGAATAGTCTTGATCCTCTACCCCCCCTGCTGTTTCTACAGTCCTTCCCTCGTCCCATAGTTTCATCACTGTAATTGGCTTCTACCTTTGGTTTTAATCCAGCAGTGAACTTTCTAGTAACTGGTGCAAAATTTCCAGTGATTCTGCCGTTCAAATTCATAATCCTGACTGCCATCAAGACTATCAATCACTCCTTGGATCTGGCACTCATTTTGCATCCAAGTATTGGCATGCTCAAAACATGTTCTCTCTATTTCATTCTTTTATCGAATCACCTTCTCTCACAATGTTACAATGTTTCTTTCTAGCATAGGAAGCTTTATAAGCTTCTCCGTAGGGTAAATACCACACTGCATTTCTGCTATTATCAAATTCAAATTTGATCTTCCTTCTATCAACCAATCATATGGAGGGCTAATGCCAAAGCTGATAGGGCCCATACAATTGGATTTAAGGTTTAACAAATAATGTCAATTGCAATTGGAAATGCTTTGCTGTGTGCTAGAAAAAGACATAATTCCGTACATTTTCCCTGATTGTCTCAAGAGGCTGCAACCAAACTAAATTGTTTTGAGTTTTGAAATATTCATTCTCGTTCAAACAGTTGGTTTCAATTGTTTCTGTACCGTGCTATTTTCTTTGTTGATAAAAAGGGGTTTTCTGGGTTATGCTGGAGATGTCAGTACCATTATGTATATATTATATATATATCTGTAGAGAATGAAGTGTATACAATCATTCCAATTTCTTAGTACCATTAATATGTTTCGAATCTAACCATTCCCATTTCTCTTTTGACAAAACCCTATGCAGCCATTCGACTGGATCAAGAAAACGTTCTTCGATAAGCCACAAGAGGCATAAATTGTTATTCGACTCGACCCAGCTTTTAATTTTGTTAATAAGTATCAGTTGATTGCCGCAAATGGGCAAACTGCAGAGTTCGTTGGAATAACATGTTTTGTAATAGACTTTGTTTTTCATTAAACTGAGTTGGAATTTTATCGTTTTCAAGTGTGGTTGATATTTTTTCTTATCCCTATGTACTATTTTCTAGGATCTTTTCCTTTTCCCATGCCTTAGAGAGACCCCAGCTTCTATTTTTAGAAATTATAAAAACAAATTTAAAATTTTAATAAAATTTTCACATTTTTTTAGGAAAA CTCTCATCCTCGCTTGTGTTGGTAACCGACATGTCGTAACTGGACTGGGTCGCTTGGATGACAGTGTCAGAGGGACCAACGACATGTAGTGCATGCTTTAAGGGCAAAAAAGGTTTACCATCAGAATTGGAAGAGGAATTCAGAGAGAAAAAATGGCAGGTGAATCAACTTTGTTCAAGTTCTTGAGCCCGGGACGCCGTTTCCAATCCACGGACATCCAAGCCGCCGCCGGCTGGGGTGTCGCCGCTGCCACAACTGCTCTATGGGTCGTTCAGCATAGGAAGCTTTATAAGCTTCTCCGTAGGCCATTCGACTGGATCAAGAAAACGTTCTTCGATAAGCCACAAGAGGCATAAATTGTTATTCGACTCGACCCAGCTTTTAATTTTGTTAATAAGTATCAGTTGATTGCCGCAAATGGGCAAACTGCAGAGTTCGTTGGAATAACATGTTTTGTAATAGACTTTGTTTTTCATTAAACTGAGTTGGAATTTTATCGTTTTCAAGTGTGGTTGATATTTTTTCTTATCCCTATGTACTATTTTCTAGGATCTTTTCCTTTTCCCATGCCTTAGAGAGACCCCAGCTTCTATTTTTAGAAATTATAAAAACAAATTTAAAATTTTAATAAAATTTTCACATTTTTTTAGGAAAA ATGGCAGGTGAATCAACTTTGTTCAAGTTCTTGAGCCCGGGACGCCGTTTCCAATCCACGGACATCCAAGCCGCCGCCGGCTGGGGTGTCGCCGCTGCCACAACTGCTCTATGGGTCGTTCAGCATAGGAAGCTTTATAAGCTTCTCCGTAGGCCATTCGACTGGATCAAGAAAACGTTCTTCGATAAGCCACAAGAGGCATAA MAGESTLFKFLSPGRRFQSTDIQAAAGWGVAAATTALWVVQHRKLYKLLRRPFDWIKKTFFDKPQEA Homology
BLAST of CmaCh15G001710 vs. ExPASy Swiss-Prot
Match: P48505 (Ubiquinol-cytochrome c reductase complex 6.7 kDa protein OS=Solanum tuberosum OX=4113 PE=1 SV=2) HSP 1 Score: 68.9 bits (167), Expect = 2.4e-11 Identity = 36/65 (55.38%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of CmaCh15G001710 vs. ExPASy Swiss-Prot
Match: Q94K78 (Cytochrome b-c1 complex subunit 10, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UCRY PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.0e-09 Identity = 34/64 (53.12%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of CmaCh15G001710 vs. ExPASy TrEMBL
Match: A0A5D3BZX3 (Ubiquinol-cytochrome c reductase complex 6.7 kDa OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002150 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.6e-13 Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 0
BLAST of CmaCh15G001710 vs. ExPASy TrEMBL
Match: A0A0B0P424 (Ubiquinol-cytochrome c reductase complex 6.7 kDa OS=Gossypium arboreum OX=29729 GN=F383_24725 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.1e-13 Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of CmaCh15G001710 vs. ExPASy TrEMBL
Match: A0A2P5YD64 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA07097 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.1e-13 Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of CmaCh15G001710 vs. ExPASy TrEMBL
Match: A9PAG4 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G059500 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.5e-13 Identity = 42/63 (66.67%), Postives = 46/63 (73.02%), Query Frame = 0
BLAST of CmaCh15G001710 vs. ExPASy TrEMBL
Match: A0A0A0K7V0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014600 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 4.6e-13 Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 0
BLAST of CmaCh15G001710 vs. NCBI nr
Match: KAG6578485.1 (hypothetical protein SDJN03_22933, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 113.6 bits (283), Expect = 6.5e-22 Identity = 57/67 (85.07%), Postives = 57/67 (85.07%), Query Frame = 0
BLAST of CmaCh15G001710 vs. NCBI nr
Match: KAG7016049.1 (hypothetical protein SDJN02_21153 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 87.4 bits (215), Expect = 5.0e-14 Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0
BLAST of CmaCh15G001710 vs. NCBI nr
Match: KAF3433259.1 (hypothetical protein FNV43_RR24361 [Rhamnella rubrinervis]) HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13 Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of CmaCh15G001710 vs. NCBI nr
Match: KAA0051979.1 (Ubiquinol-cytochrome c reductase complex 6.7 kDa [Cucumis melo var. makuwa] >TYK04578.1 Ubiquinol-cytochrome c reductase complex 6.7 kDa [Cucumis melo var. makuwa]) HSP 1 Score: 84.7 bits (208), Expect = 3.2e-13 Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 0
BLAST of CmaCh15G001710 vs. NCBI nr
Match: KHG18869.1 (Ubiquinol-cytochrome c reductase complex 6.7 kDa [Gossypium arboreum]) HSP 1 Score: 84.3 bits (207), Expect = 4.2e-13 Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of CmaCh15G001710 vs. TAIR 10
Match: AT2G40765.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 32 Blast hits to 32 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.5 bits (153), Expect = 7.2e-11 Identity = 34/64 (53.12%), Postives = 39/64 (60.94%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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