CmaCh15G001660 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G001660
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-H2 finger protein ATL74-like
Location	Cma_Chr15: 766095 .. 766703 (+)
RNA-Seq Expression	CmaCh15G001660
Synteny	CmaCh15G001660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATGGTGTCCGATCATCACCGTCCCCGTCCCCACCGCCTCCTCCTCGACGCCAACACGACGGAGGCGCCGTCGAATGGAAGCAGAACGCGAAATTCGTATACCAACGAAGCCAATTTCGACACGAACATGGTGATAATCCTTGCCGCATTACTCTGCGCATTGATTTGCGCTCTAGGATTGAACTCAATCGTTCGCTGTGCACTTCGCTGCAGCCGGCGATTCTCCTTCGAGACAGGCGGCGGCACAGCCTCGCGCCTCGCCGCAACAGGGCTGAAGAAAAGCGCATTACGCAAACTTCCGGTCACCGTATACGGGTCGGAGTCGGGTCTAGGGATTCGAGAAACGGATTGCCCTATCTGCCTGGGAGATTTCATCGCCGGAGAGAAAATCAAAGTGCTTCCAAAATGTAACCATGGATTTCACGTTCGATGTATCGATACCTGGTTGGCTTCCCACTCGTCGTGTCCGACCTGTCGTCAATCGCTGTTCGAACAGCAGTCAGCTTCTGAATCAACGGAAGCTGACGCCGGAAACCGACCCGCCGGAAATCCATCAGCTAGCGGCCAAGGTGAGATCTCGATACCCATAGATCAAATCAGCTGA

mRNA sequence

ATGGCGATGGTGTCCGATCATCACCGTCCCCGTCCCCACCGCCTCCTCCTCGACGCCAACACGACGGAGGCGCCGTCGAATGGAAGCAGAACGCGAAATTCGTATACCAACGAAGCCAATTTCGACACGAACATGGTGATAATCCTTGCCGCATTACTCTGCGCATTGATTTGCGCTCTAGGATTGAACTCAATCGTTCGCTGTGCACTTCGCTGCAGCCGGCGATTCTCCTTCGAGACAGGCGGCGGCACAGCCTCGCGCCTCGCCGCAACAGGGCTGAAGAAAAGCGCATTACGCAAACTTCCGGTCACCGTATACGGGTCGGAGTCGGGTCTAGGGATTCGAGAAACGGATTGCCCTATCTGCCTGGGAGATTTCATCGCCGGAGAGAAAATCAAAGTGCTTCCAAAATGTAACCATGGATTTCACGTTCGATGTATCGATACCTGGTTGGCTTCCCACTCGTCGTGTCCGACCTGTCGTCAATCGCTGTTCGAACAGCAGTCAGCTTCTGAATCAACGGAAGCTGACGCCGGAAACCGACCCGCCGGAAATCCATCAGCTAGCGGCCAAGGTGAGATCTCGATACCCATAGATCAAATCAGCTGA

Coding sequence (CDS)

ATGGCGATGGTGTCCGATCATCACCGTCCCCGTCCCCACCGCCTCCTCCTCGACGCCAACACGACGGAGGCGCCGTCGAATGGAAGCAGAACGCGAAATTCGTATACCAACGAAGCCAATTTCGACACGAACATGGTGATAATCCTTGCCGCATTACTCTGCGCATTGATTTGCGCTCTAGGATTGAACTCAATCGTTCGCTGTGCACTTCGCTGCAGCCGGCGATTCTCCTTCGAGACAGGCGGCGGCACAGCCTCGCGCCTCGCCGCAACAGGGCTGAAGAAAAGCGCATTACGCAAACTTCCGGTCACCGTATACGGGTCGGAGTCGGGTCTAGGGATTCGAGAAACGGATTGCCCTATCTGCCTGGGAGATTTCATCGCCGGAGAGAAAATCAAAGTGCTTCCAAAATGTAACCATGGATTTCACGTTCGATGTATCGATACCTGGTTGGCTTCCCACTCGTCGTGTCCGACCTGTCGTCAATCGCTGTTCGAACAGCAGTCAGCTTCTGAATCAACGGAAGCTGACGCCGGAAACCGACCCGCCGGAAATCCATCAGCTAGCGGCCAAGGTGAGATCTCGATACCCATAGATCAAATCAGCTGA

Protein sequence

MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGNRPAGNPSASGQGEISIPIDQIS

Homology

[Close]

BLAST of CmaCh15G001660 vs. ExPASy Swiss-Prot
Match: Q9SG96 (RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.5e-43
Identity = 95/163 (58.28%), Postives = 114/163 (69.94%), Query Frame = 0


Query: 14  RLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRCS 73
           RLLL+     AP+N +       N+  FDTNMVIILAALLCALICAL LNS +RC LR +
Sbjct: 3   RLLLEPQ-ANAPANANPKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCVLRIT 62

Query: 74  RRFSFETGGGTASR--------LAATGLKKSALRKLPVTVYGSESGLGIRETDCPICLGD 133
           RRF+ +     AS          AATGLKK AL+++PV +YGS   + ++ T+C ICLGD
Sbjct: 63  RRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGS-GIIDMKATECLICLGD 122

Query: 134 FIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQ 169
           F  GEK++VLPKCNHGFHVRCIDTWL S SSCPTCRQSL  +Q
Sbjct: 123 FEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLEQ 163

[Close]

BLAST of CmaCh15G001660 vs. ExPASy Swiss-Prot
Match: Q9FLC6 (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.0e-41
Identity = 83/138 (60.14%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 37  NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKS 96
           N A+ DT+MVIILAALLCALICALG+NS++RC LRC+RRF+        +   A G+KK 
Sbjct: 33  NIASMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAKGIKKR 92

Query: 97  ALRKLPVTVYGSESGLGIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSS 156
           AL+ +PV  Y  E  L ++ T+C ICLGDF+ GE ++VLPKCNHGFHV+CIDTWL SHSS
Sbjct: 93  ALKVIPVDSYSPE--LKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSS 152

Query: 157 CPTCRQSLFEQQSASEST 175
           CPTCRQSL E Q+ +  +
Sbjct: 153 CPTCRQSLLEHQTPANGS 168

[Close]

BLAST of CmaCh15G001660 vs. ExPASy Swiss-Prot
Match: Q9LZV8 (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.3e-41
Identity = 88/154 (57.14%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 13  HRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRC 72
           HRLLL+++     ++GS   + YT + NFD NMVIILAALLCALI ALGLNSI+RCA+RC
Sbjct: 2   HRLLLESHGGGNETSGSGGGDGYTRDMNFDANMVIILAALLCALILALGLNSILRCAMRC 61

Query: 73  SRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCPICLGDFIAGEKI 132
               S     GT +  A  GLKK  L+K PV  YGS   + I  T+C ICLG+F  GE++
Sbjct: 62  GFGLSSSAAAGTVADRA--GLKKRELKKFPVAEYGS-GEVKIAATECAICLGEFADGERV 121

Query: 133 KVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFE 167
           +VLP CNH FH+ CIDTWL SHSSCP CR SL E
Sbjct: 122 RVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLIE 152

[Close]

BLAST of CmaCh15G001660 vs. ExPASy Swiss-Prot
Match: Q6NQG7 (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.0e-38
Identity = 77/150 (51.33%), Postives = 100/150 (66.67%), Query Frame = 0


Query: 18  DANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFS 77
           D + T APS        Y  + NFD N+V++L+ LLCAL+C+LGLNSI+RCALRCS    
Sbjct: 36  DQSPTPAPS-------PYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVP 95

Query: 78  FETGGGT-ASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCPICLGDFIAGEKIKVLP 137
            E GG     RL  TG+K+ AL+      Y +E  L   +T+C ICL +F+A E++K+LP
Sbjct: 96  SEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLP 155

Query: 138 KCNHGFHVRCIDTWLASHSSCPTCRQSLFE 167
            C+HGFHVRCID WL+SHSSCPTCR  L +
Sbjct: 156 TCHHGFHVRCIDKWLSSHSSCPTCRHCLIQ 178

[Close]

BLAST of CmaCh15G001660 vs. ExPASy Swiss-Prot
Match: P0C034 (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.1e-30
Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 0


Query: 36  TNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFSFETGGGTASRLAAT---G 95
           T+E N   N++++L+ L+C +IC LGL+ I+RCALR S RF       + S    +   G
Sbjct: 49  THENNLSGNVMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKG 108

Query: 96  LKKSALRKLPVTVYGSESGLGIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLA 155
           +KK ALR  PV  Y  E  L   + +C ICL DF++GE++++LPKCNHGFHVRCID WL 
Sbjct: 109 IKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQ 168

Query: 156 SHSSCPTCRQSLFE--QQSASESTEADA 179
            H +CP CR  L E  Q+   + ++AD+
Sbjct: 169 QHLTCPKCRNCLVETCQKILGDFSQADS 196

[Close]

BLAST of CmaCh15G001660 vs. ExPASy TrEMBL
Match: A0A6J1JVF4 (RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111489233 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 7.9e-109
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60
           MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL
Sbjct: 1   MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60

Query: 61  GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120
           GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP
Sbjct: 61  GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120

Query: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180
           ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN
Sbjct: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180

Query: 181 RPAGNPSASGQGEISIPIDQIS 203
           RPAGNPSASGQGEISIPIDQIS
Sbjct: 181 RPAGNPSASGQGEISIPIDQIS 202

[Close]

BLAST of CmaCh15G001660 vs. ExPASy TrEMBL
Match: A0A6J1FF16 (RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111444892 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.9e-107
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60
           MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL
Sbjct: 1   MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60

Query: 61  GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120
           GLNSIVRCA RCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP
Sbjct: 61  GLNSIVRCAFRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120

Query: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180
           ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN
Sbjct: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180

Query: 181 RPAGNPSASGQGEISIPIDQIS 203
           RPAGN SASGQGEISIPIDQIS
Sbjct: 181 RPAGNSSASGQGEISIPIDQIS 202

[Close]

BLAST of CmaCh15G001660 vs. ExPASy TrEMBL
Match: A0A5D3BXT6 (RING-H2 finger protein ATL72 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001810 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.2e-94
Identity = 176/200 (88.00%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 3   MVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICALGL 62
           M S+HHRPR HRLLLDA+TT APSNGSRTRNSY NEANFDTNMVIILAALLCALICALGL
Sbjct: 1   MESNHHRPRSHRLLLDADTTAAPSNGSRTRNSYNNEANFDTNMVIILAALLCALICALGL 60

Query: 63  NSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCPIC 122
           NSIVRCALRCSRRF+FETGGGTASRL A+GLKKSALR++PV VYGSE+GL IRETDCPIC
Sbjct: 61  NSIVRCALRCSRRFAFETGGGTASRLTASGLKKSALRQIPVAVYGSETGLEIRETDCPIC 120

Query: 123 LGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGNRP 182
           LGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSL EQQS SES  A+AGNRP
Sbjct: 121 LGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLVEQQSVSESAGAEAGNRP 180

Query: 183 AGNPSASGQGEISIPIDQIS 203
           AGN SASGQGEISI +D+I+
Sbjct: 181 AGNSSASGQGEISITVDEIT 200

[Close]

BLAST of CmaCh15G001660 vs. ExPASy TrEMBL
Match: A0A0A0KAH2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014550 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.5e-91
Identity = 172/202 (85.15%), Postives = 183/202 (90.59%), Query Frame = 0


Query: 1   MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60
           M M S+HHRPRP RLLLD +TT  PSNGSRTRNSY NEANFDTNMVIILAALLCALICAL
Sbjct: 1   MRMESNHHRPRPPRLLLDPDTTAPPSNGSRTRNSYNNEANFDTNMVIILAALLCALICAL 60

Query: 61  GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120
           GLNSIVRCALRCSRRF+FETGGGTASRL ATGLKKSALR++PV VYGSE+GL IRETDCP
Sbjct: 61  GLNSIVRCALRCSRRFAFETGGGTASRLTATGLKKSALRQIPVAVYGSETGLEIRETDCP 120

Query: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180
           ICLGDF+AGEKIK+LPKCNHGFHVRCIDTWLASHSSCPTCRQSL EQQS SES   +AGN
Sbjct: 121 ICLGDFMAGEKIKILPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSVSESAVTEAGN 180

Query: 181 RPAGNPSASGQGEISIPIDQIS 203
           R AGN SASGQGEISI +D I+
Sbjct: 181 RGAGNSSASGQGEISITVDGIT 202

[Close]

BLAST of CmaCh15G001660 vs. ExPASy TrEMBL
Match: A0A6J1BZW4 (RING-H2 finger protein ATL74 OS=Momordica charantia OX=3673 GN=LOC111006761 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.0e-87
Identity = 165/192 (85.94%), Postives = 175/192 (91.15%), Query Frame = 0


Query: 1   MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60
           MAM SDHHR RPHR LLD + T  PSNG+RTR+SY+NEANFDTNMVIILAALLCALICAL
Sbjct: 1   MAMASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICAL 60

Query: 61  GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120
           GLNSIVRCALRCSRRF+FET GGT++RLAATGLKKSALR++PV VYGSESGL IRETDCP
Sbjct: 61  GLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCP 120

Query: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180
           ICLGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL EQQS SES  A+AGN
Sbjct: 121 ICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGN 180

Query: 181 RPAGNPSASGQG 193
           RPAGN SA GQG
Sbjct: 181 RPAGNSSAGGQG 192

[Close]

BLAST of CmaCh15G001660 vs. NCBI nr
Match: XP_022993116.1 (RING-H2 finger protein ATL74-like [Cucurbita maxima])

HSP 1 Score: 402.9 bits (1034), Expect = 1.6e-108
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60
           MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL
Sbjct: 1   MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60

Query: 61  GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120
           GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP
Sbjct: 61  GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120

Query: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180
           ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN
Sbjct: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180

Query: 181 RPAGNPSASGQGEISIPIDQIS 203
           RPAGNPSASGQGEISIPIDQIS
Sbjct: 181 RPAGNPSASGQGEISIPIDQIS 202

[Close]

BLAST of CmaCh15G001660 vs. NCBI nr
Match: KAG7016045.1 (RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 399.8 bits (1026), Expect = 1.4e-107
Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60
           MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL
Sbjct: 43  MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 102

Query: 61  GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120
           GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP
Sbjct: 103 GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 162

Query: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180
           ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN
Sbjct: 163 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 222

Query: 181 RPAGNPSASGQGEISIPIDQIS 203
           RPAGN SASGQGEISIPIDQIS
Sbjct: 223 RPAGNSSASGQGEISIPIDQIS 244

[Close]

BLAST of CmaCh15G001660 vs. NCBI nr
Match: XP_023550807.1 (RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo] >XP_023550808.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399.8 bits (1026), Expect = 1.4e-107
Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60
           MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL
Sbjct: 1   MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60

Query: 61  GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120
           GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP
Sbjct: 61  GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120

Query: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180
           ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN
Sbjct: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180

Query: 181 RPAGNPSASGQGEISIPIDQIS 203
           RPAGN SASGQGEISIPIDQIS
Sbjct: 181 RPAGNSSASGQGEISIPIDQIS 202

[Close]

BLAST of CmaCh15G001660 vs. NCBI nr
Match: XP_022938777.1 (RING-H2 finger protein ATL74-like [Cucurbita moschata])

HSP 1 Score: 398.3 bits (1022), Expect = 4.0e-107
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60
           MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL
Sbjct: 1   MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60

Query: 61  GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120
           GLNSIVRCA RCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP
Sbjct: 61  GLNSIVRCAFRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120

Query: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180
           ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN
Sbjct: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180

Query: 181 RPAGNPSASGQGEISIPIDQIS 203
           RPAGN SASGQGEISIPIDQIS
Sbjct: 181 RPAGNSSASGQGEISIPIDQIS 202

[Close]

BLAST of CmaCh15G001660 vs. NCBI nr
Match: KAG6578482.1 (RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 397.9 bits (1021), Expect = 5.2e-107
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MAMVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60
           MAMVSDHHRP PHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL
Sbjct: 1   MAMVSDHHRPHPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICAL 60

Query: 61  GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120
           GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP
Sbjct: 61  GLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCP 120

Query: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180
           ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN
Sbjct: 121 ICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGN 180

Query: 181 RPAGNPSASGQGEISIPIDQIS 203
           RPAGN SASGQGEISIPIDQIS
Sbjct: 181 RPAGNSSASGQGEISIPIDQIS 202

[Close]

BLAST of CmaCh15G001660 vs. TAIR 10
Match: AT3G10910.1 (RING/U-box superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 3.9e-44
Identity = 95/163 (58.28%), Postives = 114/163 (69.94%), Query Frame = 0


Query: 14  RLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRCS 73
           RLLL+     AP+N +       N+  FDTNMVIILAALLCALICAL LNS +RC LR +
Sbjct: 3   RLLLEPQ-ANAPANANPKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCVLRIT 62

Query: 74  RRFSFETGGGTASR--------LAATGLKKSALRKLPVTVYGSESGLGIRETDCPICLGD 133
           RRF+ +     AS          AATGLKK AL+++PV +YGS   + ++ T+C ICLGD
Sbjct: 63  RRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGS-GIIDMKATECLICLGD 122

Query: 134 FIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQ 169
           F  GEK++VLPKCNHGFHVRCIDTWL S SSCPTCRQSL  +Q
Sbjct: 123 FEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLEQ 163

[Close]

BLAST of CmaCh15G001660 vs. TAIR 10
Match: AT5G05280.1 (RING/U-box superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 7.4e-43
Identity = 83/138 (60.14%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 37  NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFSFETGGGTASRLAATGLKKS 96
           N A+ DT+MVIILAALLCALICALG+NS++RC LRC+RRF+        +   A G+KK 
Sbjct: 33  NIASMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAKGIKKR 92

Query: 97  ALRKLPVTVYGSESGLGIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSS 156
           AL+ +PV  Y  E  L ++ T+C ICLGDF+ GE ++VLPKCNHGFHV+CIDTWL SHSS
Sbjct: 93  ALKVIPVDSYSPE--LKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSS 152

Query: 157 CPTCRQSLFEQQSASEST 175
           CPTCRQSL E Q+ +  +
Sbjct: 153 CPTCRQSLLEHQTPANGS 168

[Close]

BLAST of CmaCh15G001660 vs. TAIR 10
Match: AT5G01880.1 (RING/U-box superfamily protein )

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-42
Identity = 88/154 (57.14%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 13  HRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRC 72
           HRLLL+++     ++GS   + YT + NFD NMVIILAALLCALI ALGLNSI+RCA+RC
Sbjct: 2   HRLLLESHGGGNETSGSGGGDGYTRDMNFDANMVIILAALLCALILALGLNSILRCAMRC 61

Query: 73  SRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCPICLGDFIAGEKI 132
               S     GT +  A  GLKK  L+K PV  YGS   + I  T+C ICLG+F  GE++
Sbjct: 62  GFGLSSSAAAGTVADRA--GLKKRELKKFPVAEYGS-GEVKIAATECAICLGEFADGERV 121

Query: 133 KVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFE 167
           +VLP CNH FH+ CIDTWL SHSSCP CR SL E
Sbjct: 122 RVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLIE 152

[Close]

BLAST of CmaCh15G001660 vs. TAIR 10
Match: AT1G49230.1 (RING/U-box superfamily protein )

HSP 1 Score: 158.7 bits (400), Expect = 5.0e-39
Identity = 77/150 (51.33%), Postives = 100/150 (66.67%), Query Frame = 0


Query: 18  DANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFS 77
           D + T APS        Y  + NFD N+V++L+ LLCAL+C+LGLNSI+RCALRCS    
Sbjct: 36  DQSPTPAPS-------PYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVP 95

Query: 78  FETGGGT-ASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCPICLGDFIAGEKIKVLP 137
            E GG     RL  TG+K+ AL+      Y +E  L   +T+C ICL +F+A E++K+LP
Sbjct: 96  SEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLP 155

Query: 138 KCNHGFHVRCIDTWLASHSSCPTCRQSLFE 167
            C+HGFHVRCID WL+SHSSCPTCR  L +
Sbjct: 156 TCHHGFHVRCIDKWLSSHSSCPTCRHCLIQ 178

[Close]

BLAST of CmaCh15G001660 vs. TAIR 10
Match: AT1G49220.1 (RING/U-box superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.2e-31
Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 0


Query: 36  TNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFSFETGGGTASRLAAT---G 95
           T+E N   N++++L+ L+C +IC LGL+ I+RCALR S RF       + S    +   G
Sbjct: 49  THENNLSGNVMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKG 108

Query: 96  LKKSALRKLPVTVYGSESGLGIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCIDTWLA 155
           +KK ALR  PV  Y  E  L   + +C ICL DF++GE++++LPKCNHGFHVRCID WL 
Sbjct: 109 IKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQ 168

Query: 156 SHSSCPTCRQSLFE--QQSASESTEADA 179
            H +CP CR  L E  Q+   + ++AD+
Sbjct: 169 QHLTCPKCRNCLVETCQKILGDFSQADS 196

The following BLAST results are available for this feature:

BLAST of CmaCh15G001660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SG96	5.5e-43	58.28	RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1	[more]
Q9FLC6	1.0e-41	60.14	RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1	[more]
Q9LZV8	2.3e-41	57.14	RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1	[more]
Q6NQG7	7.0e-38	51.33	RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1	[more]
P0C034	3.1e-30	45.27	RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1	[more]

BLAST of CmaCh15G001660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JVF4	7.9e-109	100.00	RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111489233 PE...	[more]
A0A6J1FF16	1.9e-107	99.01	RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111444892 ...	[more]
A0A5D3BXT6	4.2e-94	88.00	RING-H2 finger protein ATL72 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0KAH2	2.5e-91	85.15	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014550 P...	[more]
A0A6J1BZW4	1.0e-87	85.94	RING-H2 finger protein ATL74 OS=Momordica charantia OX=3673 GN=LOC111006761 PE=4...	[more]

BLAST of CmaCh15G001660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993116.1	1.6e-108	100.00	RING-H2 finger protein ATL74-like [Cucurbita maxima]	[more]
KAG7016045.1	1.4e-107	99.50	RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_023550807.1	1.4e-107	99.50	RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo] >XP_023550808.1 R...	[more]
XP_022938777.1	4.0e-107	99.01	RING-H2 finger protein ATL74-like [Cucurbita moschata]	[more]
KAG6578482.1	5.2e-107	99.01	RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmaCh15G001660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10910.1	3.9e-44	58.28	RING/U-box superfamily protein	[more]
AT5G05280.1	7.4e-43	60.14	RING/U-box superfamily protein	[more]
AT5G01880.1	1.7e-42	57.14	RING/U-box superfamily protein	[more]
AT1G49230.1	5.0e-39	51.33	RING/U-box superfamily protein	[more]
AT1G49220.1	2.2e-31	45.27	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 119..160 e-value: 1.0E-7 score: 41.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 118..161 e-value: 2.3E-13 score: 50.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 119..161 score: 12.1057
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 82..166 e-value: 1.3E-22 score: 81.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR45798:SF44	RING-H2 FINGER PROTEIN ATL74	coord: 13..184
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 13..184
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 118..161 e-value: 5.20628E-17 score: 69.6381
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 113..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G001660.1	CmaCh15G001660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane