CmaCh15G001530 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G001530
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Transcription factor bHLH61-like protein
Location	Cma_Chr15: 716865 .. 718795 (+)
RNA-Seq Expression	CmaCh15G001530
Synteny	CmaCh15G001530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAGCTAGCCAACACAAGTTGGTATAGATTTGAGGCCTCACCATGCCTTTATAAAAACACACACAAGAAAAAGAAACATATAACACACAAACAAAAAGGCTACAATCCATCCATGGTTTCTAGAGAGCACAACAACGCAGCTCTTCATCACAACCTCCAATTACTTCGCTCTATTACCAATTCTCATGCTGTAATTTCCCTCTCTTTTCTCTTCATTTTGTTCATCGCGTTCTTCGTGTTCTTCGTGTTCTTTGATTCGATTCTCAATTCATTCATAAAAAGTTATGATTTTTATGTGTGTAGCAGCTCAACAAGGCCTCGATTATAGTGGATGCATCAAAATACATCGAGGAGCTTAAACAAAAAGTAGAAAGATTGAATCAAGATATCTCAACCGTTCAAACTTCAATCCATCCCATGGTATTTTCTTCAATCAACAACAACTTTTTCACTTAAATTATTCAAGAACAACCAAAAAAAAACATACCCATTTGTTGATTATAGCAGGTGACAGTGGAAAGCCTAGCAAAGGGGTTTTCCATTAATGTATTTTCAGAAAAGAGCTGCCAAGGCCTGCTCGTGTCGATATTAGAAGCCTTTGAAGAGCTGGGGCTGAATGTTCTTGAAGCTAGGGTTTCTTGTACAGATAGTTTCCAATTACAAGCTATTGCAGAAGTAAGATACTACAAGCACCCATCTTTCTATAATTATGCATATAAATCATCATCATTATAAAAACATATATTTATTATTATTATTCCATGGTCAAGAAAGTCAAATCAATCATTCATTTTAACAAGAATATTTACCTAAAGTAATGGAATTTTCCATCTAATCATACACTTCAATGTCGGGTTTTTTTTTTTTTTTTTTTTTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTAATATATGATATTAAATTTAATGTGTGGATTAAAATGGGTGTTTGTAATTTTATAGATTGAGGAAGAAGGAGAAGAAGCCATTGATGCTCAAGCTGTGAAAGAAGCAGTAGTTCAAGCTATAAAGATCTGGAGCCAAAGCGGTGAACAAGATTAAAAACATCCTTAATTTCTCCAACTTGTTCCAATTGCGGCTGTTTTTTTTGGTTTTGTTCTTACCTGTCTGTGATTGTAATGCAGTAAAAAGTAATCAATGGAACAACCGATTGCTTAATCTAAAATATTGATATGAACATGGTAACTCCCACTATAAGATTCATGCGCATGGTTTGTTGAAAATCATGAAAGGTGTCATTTTTGGAGATGAAGTACGAAAAGGAACCATTTTTGTTATGCTTTTTGGTTTTGGGTTTGTAAAGGTGGGAGCTTTTTCATCATTATAGAACTGATATCATTTCATCATTAAAGGGTACGTAGAAATAAAGAAAGAAAGAAAGGC

mRNA sequence

AGGAAGCTAGCCAACACAAGTTGGTATAGATTTGAGGCCTCACCATGCCTTTATAAAAACACACACAAGAAAAAGAAACATATAACACACAAACAAAAAGGCTACAATCCATCCATGGTTTCTAGAGAGCACAACAACGCAGCTCTTCATCACAACCTCCAATTACTTCGCTCTATTACCAATTCTCATGCTCTCAACAAGGCCTCGATTATAGTGGATGCATCAAAATACATCGAGGAGCTTAAACAAAAAGTAGAAAGATTGAATCAAGATATCTCAACCGTTCAAACTTCAATCCATCCCATGCAGGTGACAGTGGAAAGCCTAGCAAAGGGGTTTTCCATTAATGTATTTTCAGAAAAGAGCTGCCAAGGCCTGCTCGTGTCGATATTAGAAGCCTTTGAAGAGCTGGGGCTGAATGTTCTTGAAGCTAGGGTTTCTTGTACAGATAGTTTCCAATTACAAGCTATTGCAGAAATTGAGGAAGAAGGAGAAGAAGCCATTGATGCTCAAGCTGTGAAAGAAGCAGTAGTTCAAGCTATAAAGATCTGGAGCCAAAGCGGTGAACAAGATTAAAAACATCCTTAATTTCTCCAACTTGTTCCAATTGCGGCTGTTTTTTTTGGTTTTGTTCTTACCTGTCTGTGATTGTAATGCAGTAAAAAGTAATCAATGGAACAACCGATTGCTTAATCTAAAATATTGATATGAACATGGTAACTCCCACTATAAGATTCATGCGCATGGTTTGTTGAAAATCATGAAAGGTGTCATTTTTGGAGATGAAGTACGAAAAGGAACCATTTTTGTTATGCTTTTTGGTTTTGGGTTTGTAAAGGTGGGAGCTTTTTCATCATTATAGAACTGATATCATTTCATCATTAAAGGGTACGTAGAAATAAAGAAAGAAAGAAAGGC

Coding sequence (CDS)

ATGGTTTCTAGAGAGCACAACAACGCAGCTCTTCATCACAACCTCCAATTACTTCGCTCTATTACCAATTCTCATGCTCTCAACAAGGCCTCGATTATAGTGGATGCATCAAAATACATCGAGGAGCTTAAACAAAAAGTAGAAAGATTGAATCAAGATATCTCAACCGTTCAAACTTCAATCCATCCCATGCAGGTGACAGTGGAAAGCCTAGCAAAGGGGTTTTCCATTAATGTATTTTCAGAAAAGAGCTGCCAAGGCCTGCTCGTGTCGATATTAGAAGCCTTTGAAGAGCTGGGGCTGAATGTTCTTGAAGCTAGGGTTTCTTGTACAGATAGTTTCCAATTACAAGCTATTGCAGAAATTGAGGAAGAAGGAGAAGAAGCCATTGATGCTCAAGCTGTGAAAGAAGCAGTAGTTCAAGCTATAAAGATCTGGAGCCAAAGCGGTGAACAAGATTAA

Protein sequence

MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTSIHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD

Homology

[Close]

BLAST of CmaCh15G001530 vs. ExPASy Swiss-Prot
Match: Q9LXA9 (Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 7.7e-05
Identity = 41/154 (26.62%), Postives = 74/154 (48.05%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSIT-NSHALNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           +++       L+  L LLRSI      +++ SI+ DA  Y++EL  K+ +L +D   + +
Sbjct: 153 LMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQELGS 212

Query: 61  SIH-PMQVTVESLAKGF--------SINVFSEKSC---QGLLVSILEAFEELGLNVLEAR 120
           + H    +T ES+ +           +N   +  C    GL+VS +   E LGL + +  
Sbjct: 213 NSHLSTLITNESMVRNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCV 272

Query: 121 VSCTDSFQLQAIAEIEEEGEEAIDAQAVKEAVVQ 142
           +SC   F LQA      E    + ++A K+A+++
Sbjct: 273 ISCFSDFSLQASCFEVGEQRYMVTSEATKQALIR 306

[Close]

BLAST of CmaCh15G001530 vs. ExPASy TrEMBL
Match: A0A6J1K013 (uncharacterized protein LOC111489817 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489817 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.1e-73
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60
           MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS
Sbjct: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60

Query: 61  IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120
           IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA
Sbjct: 61  IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120

Query: 121 EIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           EIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD
Sbjct: 121 EIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 153

[Close]

BLAST of CmaCh15G001530 vs. ExPASy TrEMBL
Match: A0A6J1FL41 (uncharacterized protein LOC111445214 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445214 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.4e-72
Identity = 150/153 (98.04%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60
           MVSREHNNA+LHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS
Sbjct: 1   MVSREHNNASLHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60

Query: 61  IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120
           IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA
Sbjct: 61  IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120

Query: 121 EIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           EIEE+GEEAIDAQ+VKEAVVQAIKIWSQSGEQD
Sbjct: 121 EIEEQGEEAIDAQSVKEAVVQAIKIWSQSGEQD 153

[Close]

BLAST of CmaCh15G001530 vs. ExPASy TrEMBL
Match: A0A6J1K1N3 (uncharacterized protein LOC111489817 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489817 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.6e-72
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSITNSHA-LNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREHNNAALHHNLQLLRSITNSHA LNKASIIVDASKYIEELKQKVERLNQDISTVQT
Sbjct: 1   MVSREHNNAALHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60

Query: 61  SIHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAI 120
           SIHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAI
Sbjct: 61  SIHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAI 120

Query: 121 AEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           AEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD
Sbjct: 121 AEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154

[Close]

BLAST of CmaCh15G001530 vs. ExPASy TrEMBL
Match: A0A6J1JUG1 (uncharacterized protein LOC111489817 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111489817 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.9e-71
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60
           MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS
Sbjct: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60

Query: 61  IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120
           IHPM VTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA
Sbjct: 61  IHPM-VTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120

Query: 121 EIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           EIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD
Sbjct: 121 EIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 152

[Close]

BLAST of CmaCh15G001530 vs. ExPASy TrEMBL
Match: A0A6J1FG89 (uncharacterized protein LOC111445214 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445214 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.4e-71
Identity = 150/154 (97.40%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSITNSHA-LNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREHNNA+LHHNLQLLRSITNSHA LNKASIIVDASKYIEELKQKVERLNQDISTVQT
Sbjct: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60

Query: 61  SIHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAI 120
           SIHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAI
Sbjct: 61  SIHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAI 120

Query: 121 AEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           AEIEE+GEEAIDAQ+VKEAVVQAIKIWSQSGEQD
Sbjct: 121 AEIEEQGEEAIDAQSVKEAVVQAIKIWSQSGEQD 154

[Close]

BLAST of CmaCh15G001530 vs. NCBI nr
Match: XP_022993985.1 (uncharacterized protein LOC111489817 isoform X2 [Cucurbita maxima])

HSP 1 Score: 284.3 bits (726), Expect = 6.4e-73
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60
           MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS
Sbjct: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60

Query: 61  IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120
           IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA
Sbjct: 61  IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120

Query: 121 EIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           EIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD
Sbjct: 121 EIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 153

[Close]

BLAST of CmaCh15G001530 vs. NCBI nr
Match: XP_023551077.1 (uncharacterized protein LOC111809011 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.0 bits (720), Expect = 3.2e-72
Identity = 151/153 (98.69%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60
           MVSREHNNA+LHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS
Sbjct: 1   MVSREHNNASLHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60

Query: 61  IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120
           IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA
Sbjct: 61  IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120

Query: 121 EIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           EIEE+GEEAIDAQAVKEAVVQAIKIWSQSGEQD
Sbjct: 121 EIEEQGEEAIDAQAVKEAVVQAIKIWSQSGEQD 153

[Close]

BLAST of CmaCh15G001530 vs. NCBI nr
Match: XP_022939238.1 (uncharacterized protein LOC111445214 isoform X2 [Cucurbita moschata])

HSP 1 Score: 280.8 bits (717), Expect = 7.1e-72
Identity = 150/153 (98.04%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60
           MVSREHNNA+LHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS
Sbjct: 1   MVSREHNNASLHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60

Query: 61  IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120
           IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA
Sbjct: 61  IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120

Query: 121 EIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           EIEE+GEEAIDAQ+VKEAVVQAIKIWSQSGEQD
Sbjct: 121 EIEEQGEEAIDAQSVKEAVVQAIKIWSQSGEQD 153

[Close]

BLAST of CmaCh15G001530 vs. NCBI nr
Match: KAG6578467.1 (Transcription factor basic helix-loop-helix 61, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 280.4 bits (716), Expect = 9.2e-72
Identity = 149/153 (97.39%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60
           MVSREHNNA+LHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS
Sbjct: 1   MVSREHNNASLHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60

Query: 61  IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120
           IHPMQVTVESLAKGFSINVFSEKSCQGLLVS+LEAFEELGLNVLEARVSCTDSFQLQAIA
Sbjct: 61  IHPMQVTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTDSFQLQAIA 120

Query: 121 EIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           EIEE+GEEAIDAQAVKEAVV+AIKIWSQSGEQD
Sbjct: 121 EIEEQGEEAIDAQAVKEAVVEAIKIWSQSGEQD 153

[Close]

BLAST of CmaCh15G001530 vs. NCBI nr
Match: XP_022993984.1 (uncharacterized protein LOC111489817 isoform X1 [Cucurbita maxima])

HSP 1 Score: 279.6 bits (714), Expect = 1.6e-71
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSITNSHA-LNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREHNNAALHHNLQLLRSITNSHA LNKASIIVDASKYIEELKQKVERLNQDISTVQT
Sbjct: 1   MVSREHNNAALHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60

Query: 61  SIHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAI 120
           SIHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAI
Sbjct: 61  SIHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAI 120

Query: 121 AEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           AEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD
Sbjct: 121 AEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154

[Close]

BLAST of CmaCh15G001530 vs. TAIR 10
Match: AT2G40435.1 (BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 159.8 bits (403), Expect = 1.7e-39
Identity = 92/153 (60.13%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60
           MVSRE    +L    QLLRSITNSHA N  SII+DASKYI++LKQKVER NQD +  Q+S
Sbjct: 1   MVSREQKRGSLQEKFQLLRSITNSHAENDTSIIMDASKYIQKLKQKVERFNQDPTAEQSS 60

Query: 61  IHPM-----QVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQ 120
             P       VTVE+L KGF INVFS K+  G+LVS+LEAFE++GLNVLEAR SCTDSF 
Sbjct: 61  SEPTDPKTPMVTVETLDKGFMINVFSGKNQPGMLVSVLEAFEDIGLNVLEARASCTDSFS 120

Query: 121 LQAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQ 149
           L A+  +E E  E +DA+AVK+AV  AI+ W +
Sbjct: 121 LHAMG-LENEDGENMDAEAVKQAVTDAIRSWGE 152

[Close]

BLAST of CmaCh15G001530 vs. TAIR 10
Match: AT3G56220.1 (transcription regulators )

HSP 1 Score: 142.1 bits (357), Expect = 3.6e-34
Identity = 84/155 (54.19%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 1   MVSREH-NNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQ- 60
           MVSREH   ++L     LLRSIT+SHA ++ SIIVDASKYI++LKQKVE++N   ++ Q 
Sbjct: 1   MVSREHKRGSSLREKFHLLRSITDSHAESETSIIVDASKYIKKLKQKVEKINNATTSEQS 60

Query: 61  ----TSIHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSF 120
               +  +PM VTVE+L KGF I V S K+  G+LV +LE FE+LGL+V+EARVSCTD+F
Sbjct: 61  FRESSDPNPM-VTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEARVSCTDTF 120

Query: 121 QLQAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQS 150
            L AI     +  + IDA+AVK+AV +AI+ WS S
Sbjct: 121 SLHAIGSSNNDDGDCIDAEAVKQAVAEAIRTWSDS 154

[Close]

BLAST of CmaCh15G001530 vs. TAIR 10
Match: AT1G29270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40435.1); Has 98 Blast hits to 98 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 45/126 (35.71%), Postives = 75/126 (59.52%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSITN-SHALNKASIIV-DASKYIEELKQKVERLNQDIS--- 60
           MV+ E    A       L+++T+   ++++ S+++ +A  YI  LK ++E L ++     
Sbjct: 1   MVASEQKKRASQGKPHFLKNLTHFKFSIHEQSMVIREALLYIAMLKLEIEALQREYEDLK 60

Query: 61  -TVQTSIHPMQ-VTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDS 120
            T + S+H  Q V VE + + F + + S +  +  LV+ILEAFEE+GLNV +AR SC DS
Sbjct: 61  ITKKESLHQFQEVKVEKIGEMFQVKIKSPRG-ENNLVNILEAFEEMGLNVAQARASCLDS 120

[Close]

BLAST of CmaCh15G001530 vs. TAIR 10
Match: AT5G10570.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 5.5e-06
Identity = 41/154 (26.62%), Postives = 74/154 (48.05%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSIT-NSHALNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           +++       L+  L LLRSI      +++ SI+ DA  Y++EL  K+ +L +D   + +
Sbjct: 153 LMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQELGS 212

Query: 61  SIH-PMQVTVESLAKGF--------SINVFSEKSC---QGLLVSILEAFEELGLNVLEAR 120
           + H    +T ES+ +           +N   +  C    GL+VS +   E LGL + +  
Sbjct: 213 NSHLSTLITNESMVRNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCV 272

Query: 121 VSCTDSFQLQAIAEIEEEGEEAIDAQAVKEAVVQ 142
           +SC   F LQA      E    + ++A K+A+++
Sbjct: 273 ISCFSDFSLQASCFEVGEQRYMVTSEATKQALIR 306

[Close]

BLAST of CmaCh15G001530 vs. TAIR 10
Match: AT1G12860.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04
Identity = 41/168 (24.40%), Postives = 79/168 (47.02%), Query Frame = 0


Query: 1   MVSREHNNAALHHNLQLLRSIT-NSHALNKASIIVDASKYIEELKQKVERLNQDISTV-- 60
           +++       L+  L +LRS+      +++ASI+ DA  Y++EL Q++  L+ ++ +   
Sbjct: 269 LMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELESTPP 328

Query: 61  -QTSIHPMQVTVESLA------------------------------KGFSINVFSEKSCQ 120
             +S+HP+  T ++L+                              K  +I++F  +   
Sbjct: 329 SSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFCGRR-P 388

Query: 121 GLLVSILEAFEELGLNVLEARVSCTDSFQLQAI-AEIEEEGEEAIDAQ 134
           GLL+S + A + LGL+V +A +SC + F L    AE  +E  + +  Q
Sbjct: 389 GLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVLPEQ 435

The following BLAST results are available for this feature:

BLAST of CmaCh15G001530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXA9	7.7e-05	26.62	Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1	[more]

BLAST of CmaCh15G001530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K013	3.1e-73	100.00	uncharacterized protein LOC111489817 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FL41	3.4e-72	98.04	uncharacterized protein LOC111445214 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1K1N3	7.6e-72	99.35	uncharacterized protein LOC111489817 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JUG1	2.9e-71	99.35	uncharacterized protein LOC111489817 isoform X4 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FG89	8.4e-71	97.40	uncharacterized protein LOC111445214 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CmaCh15G001530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993985.1	6.4e-73	100.00	uncharacterized protein LOC111489817 isoform X2 [Cucurbita maxima]	[more]
XP_023551077.1	3.2e-72	98.69	uncharacterized protein LOC111809011 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022939238.1	7.1e-72	98.04	uncharacterized protein LOC111445214 isoform X2 [Cucurbita moschata]	[more]
KAG6578467.1	9.2e-72	97.39	Transcription factor basic helix-loop-helix 61, partial [Cucurbita argyrosperma ...	[more]
XP_022993984.1	1.6e-71	99.35	uncharacterized protein LOC111489817 isoform X1 [Cucurbita maxima]	[more]

BLAST of CmaCh15G001530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40435.1	1.7e-39	60.13	BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G5...	[more]
AT3G56220.1	3.6e-34	54.19	transcription regulators	[more]
AT1G29270.1	1.3e-10	35.71	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G10570.1	5.5e-06	26.62	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12860.1	1.4e-04	24.40	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 33..60
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 1..151
None	No IPR available	PANTHER	PTHR31945:SF5	TRANSCRIPTION FACTOR SCREAM-LIKE PROTEIN	coord: 1..151
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 4..74 e-value: 7.7E-6 score: 27.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 15..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G001530.1	CmaCh15G001530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity