CmaCh15G001240 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G001240
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	WUSCHEL-related homeobox 5-like
Location	Cma_Chr15: 578806 .. 579607 (-)
RNA-Seq Expression	CmaCh15G001240
Synteny	CmaCh15G001240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCGGAAGAGTATTAATATGGAGGATGGGGTTTGTTCTAGAATTTACGTAAAAGGGGGCGGATGCGGCGGAGAGGGTGGCGGCGGCGGAGGTGGAAAGGGAAGTGGGAGTAGTAAATGTGGGAGATGGAATCCAACTGCAGAACAAGTAAAGGTGCTGACAGAGCTGTTCAGGTCAGGGCTTAGAACTCCGAGTAGCGATCAGATTCAGAAAATCTCTCATCAGCTCAGCTTTTACGGCAAGATCGAGAGCAAGAATGTGTTTTACTGGTTTCAGAATCATAAAGCTCGTGAGAGACAAAAGCGTCGCAAAGTTTCCCTTTCTCTTGATCACTCTCATCAACACCAGCATTTCCTTCATCCTCTTCATCTCTCTAATGACCACCACCACAACAACAACAACATTATTCCACCCACTAACCGTATGTTTCTCACCTCGTTTGTATCCATTTCTGGTTCTAAAAACACGAATCTGGGTTGAGTTTTGTTTCATGGTTCTGTGTTGTTTTCTTTGTGGTTTGAGCAGATTTTGCAGACCAGTCGAGCCCAAATAAGGGTATAATGGAGTTGGAGCCAGAAAGAATGATGAAAACGCTTCAACTTTTTCCACTAAACTCCATTGATGAAACACAAGGATCAGATGATTATCATCAGTTTAGAGTAGATGGGAAGCAGTACGAGGGTGCAACATCTTTCACCTACAAAATAGAGACAAAAATGGATCATCCGCCATTGGATCTTCGTTTAAGCTTTCTGTAGATCAGATTGATGAGTATCCAAAACTTACGATGGTTGTCAAT

mRNA sequence

ATGAGCCGGAAGAGTATTAATATGGAGGATGGGGTTTGTTCTAGAATTTACGTAAAAGGGGGCGGATGCGGCGGAGAGGGTGGCGGCGGCGGAGGTGGAAAGGGAAGTGGGAGTAGTAAATGTGGGAGATGGAATCCAACTGCAGAACAAGTAAAGGTGCTGACAGAGCTGTTCAGGTCAGGGCTTAGAACTCCGAGTAGCGATCAGATTCAGAAAATCTCTCATCAGCTCAGCTTTTACGGCAAGATCGAGAGCAAGAATGTGTTTTACTGGTTTCAGAATCATAAAGCTCGTGAGAGACAAAAGCGTCGCAAAGTTTCCCTTTCTCTTGATCACTCTCATCAACACCAGCATTTCCTTCATCCTCTTCATCTCTCTAATGACCACCACCACAACAACAACAACATTATTCCACCCACTAACCATTTTGCAGACCAGTCGAGCCCAAATAAGGGTATAATGGAGTTGGAGCCAGAAAGAATGATGAAAACGCTTCAACTTTTTCCACTAAACTCCATTGATGAAACACAAGGATCAGATGATTATCATCAGTTTAGAGTAGATGGGAAGCAGTACGAGGGTGCAACATCTTTCACCTACAAAATAGAGACAAAAATGGATCATCCGCCATTGGATCTTCGTTTAAGCTTTCTGTAGATCAGATTGATGAGTATCCAAAACTTACGATGGTTGTCAAT

Coding sequence (CDS)

ATGAGCCGGAAGAGTATTAATATGGAGGATGGGGTTTGTTCTAGAATTTACGTAAAAGGGGGCGGATGCGGCGGAGAGGGTGGCGGCGGCGGAGGTGGAAAGGGAAGTGGGAGTAGTAAATGTGGGAGATGGAATCCAACTGCAGAACAAGTAAAGGTGCTGACAGAGCTGTTCAGGTCAGGGCTTAGAACTCCGAGTAGCGATCAGATTCAGAAAATCTCTCATCAGCTCAGCTTTTACGGCAAGATCGAGAGCAAGAATGTGTTTTACTGGTTTCAGAATCATAAAGCTCGTGAGAGACAAAAGCGTCGCAAAGTTTCCCTTTCTCTTGATCACTCTCATCAACACCAGCATTTCCTTCATCCTCTTCATCTCTCTAATGACCACCACCACAACAACAACAACATTATTCCACCCACTAACCATTTTGCAGACCAGTCGAGCCCAAATAAGGGTATAATGGAGTTGGAGCCAGAAAGAATGATGAAAACGCTTCAACTTTTTCCACTAAACTCCATTGATGAAACACAAGGATCAGATGATTATCATCAGTTTAGAGTAGATGGGAAGCAGTACGAGGGTGCAACATCTTTCACCTACAAAATAGAGACAAAAATGGATCATCCGCCATTGGATCTTCGTTTAAGCTTTCTGTAG

Protein sequence

MSRKSINMEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLSNDHHHNNNNIIPPTNHFADQSSPNKGIMELEPERMMKTLQLFPLNSIDETQGSDDYHQFRVDGKQYEGATSFTYKIETKMDHPPLDLRLSFL

Homology

[Close]

BLAST of CmaCh15G001240 vs. ExPASy Swiss-Prot
Match: Q8H1D2 (WUSCHEL-related homeobox 5 OS=Arabidopsis thaliana OX=3702 GN=WOX5 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.2e-36
Identity = 101/209 (48.33%), Postives = 127/209 (60.77%), Query Frame = 0


Query: 18  VKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQL 77
           VKG    G   GG G      +KCGRWNPT EQ+K+LT+LFR+GLRTP++DQIQKIS +L
Sbjct: 5   VKGRSLRGNNNGGTG------TKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTEL 64

Query: 78  SFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLSNDHHHNNNNII 137
           SFYGKIESKNVFYWFQNHKARERQKRRK+S+  DH                HHH      
Sbjct: 65  SFYGKIESKNVFYWFQNHKARERQKRRKISIDFDH----------------HHHQ----- 124

Query: 138 PPTNHFADQSSPNKGIMELEPERMMKTLQLFPLNSIDETQGSDDYHQFRVDGKQYE---- 197
           P T    + S  +      E E++++TLQLFP+NS +++    D  + R + +  E    
Sbjct: 125 PSTRDVFEISEEDC----QEEEKVIETLQLFPVNSFEDSNSKVDKMRARGNNQYREYIRE 182

Query: 198 -GATSFT--YKIETKMDH-PPLDLRLSFL 219
              TSF+       +M+H PPLDLRLSFL
Sbjct: 185 TTTTSFSPYSSCGAEMEHPPPLDLRLSFL 182

[Close]

BLAST of CmaCh15G001240 vs. ExPASy Swiss-Prot
Match: Q9FFK0 (WUSCHEL-related homeobox 7 OS=Arabidopsis thaliana OX=3702 GN=WOX7 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 9.2e-28
Identity = 67/93 (72.04%), Postives = 76/93 (81.72%), Query Frame = 0


Query: 21  GGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFY 80
           G C    GGGG G     +KCGRWNPT EQVK+LT+LF++GLRTPS+DQIQKIS +LSFY
Sbjct: 12  GLCNNNNGGGGTG-----AKCGRWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFY 71

Query: 81  GKIESKNVFYWFQNHKARERQKRRKVS-LSLDH 113
           GKIESKNVFYWFQNHKARERQK RK+S +  DH
Sbjct: 72  GKIESKNVFYWFQNHKARERQKCRKISTVKFDH 99

[Close]

BLAST of CmaCh15G001240 vs. ExPASy Swiss-Prot
Match: Q8W0F1 (WUSCHEL-related homeobox 9 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX9 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.9e-25
Identity = 88/201 (43.78%), Postives = 113/201 (56.22%), Query Frame = 0


Query: 40  KCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARE 99
           KCGRWNPTAEQVKVLTELFR+GLRTPS++QIQ+IS  LS +GK+ESKNVFYWFQNHKARE
Sbjct: 11  KCGRWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARE 70

Query: 100 R---QKRRKVSLSLDHSHQHQHFLHPLHLSNDH------HHNNNNII--PPT-------- 159
           R   +KRR+ + S D              SND       H  + +++  PP         
Sbjct: 71  RHHHKKRRRGASSPDSG------------SNDDDGRAAAHEGDADLVLQPPESKREARSY 130

Query: 160 -NHFADQSSPNKGIMELE-----PERMMKTLQLFPLNSIDETQGSDDYHQFRVDGKQYEG 216
            +H    +   + ++E E     P R ++TL+LFPL S D     D     R  G +   
Sbjct: 131 GHHHRLMTCYVRDVVETEAMWERPTREVETLELFPLKSYD--LEVDKVRYVRGGGGEQCR 190

[Close]

BLAST of CmaCh15G001240 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-20
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 43  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQK 102
           RWNPT +Q++VL EL+R G RTPS+D IQ+I+ QL  YGKIE KNVFYWFQNHKARERQK
Sbjct: 76  RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135

Query: 103 RRK 106
           RR+
Sbjct: 136 RRR 138

[Close]

BLAST of CmaCh15G001240 vs. ExPASy Swiss-Prot
Match: Q25AM2 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 7.1e-20
Identity = 43/66 (65.15%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 43  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQK 102
           RWNP+AEQ+KVL  L+R G+RTP+S QI++I+ +L  YG+IE KNVFYWFQNHKARERQK
Sbjct: 92  RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 151

Query: 103 RRKVSL 109
           +++ +L
Sbjct: 152 QKRAAL 157

[Close]

BLAST of CmaCh15G001240 vs. ExPASy TrEMBL
Match: A0A6J1JWK4 (WUSCHEL-related homeobox 5-like OS=Cucurbita maxima OX=3661 GN=LOC111489507 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 4.6e-115
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 8   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 67
           MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS
Sbjct: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60

Query: 68  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLSN 127
           DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLSN
Sbjct: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLSN 120

Query: 128 DHHHNNNNIIPPTNHFADQSSPNKGIMELEPERMMKTLQLFPLNSIDETQGSDDYHQFRV 187
           DHHHNNNNIIPPTNHFADQSSPNKGIMELEPERMMKTLQLFPLNSIDETQGSDDYHQFRV
Sbjct: 121 DHHHNNNNIIPPTNHFADQSSPNKGIMELEPERMMKTLQLFPLNSIDETQGSDDYHQFRV 180

Query: 188 DGKQYEGATSFTYKIETKMDHPPLDLRLSFL 219
           DGKQYEGATSFTYKIETKMDHPPLDLRLSFL
Sbjct: 181 DGKQYEGATSFTYKIETKMDHPPLDLRLSFL 211

[Close]

BLAST of CmaCh15G001240 vs. ExPASy TrEMBL
Match: A0A6J1FH52 (WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111445643 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.3e-113
Identity = 210/218 (96.33%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   MSRKSINMEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRS 60
           MSRKSINMEDGVCSRIYVKGGGC GEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRS
Sbjct: 1   MSRKSINMEDGVCSRIYVKGGGCSGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRS 60

Query: 61  GLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFL 120
           GLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQ QHFL
Sbjct: 61  GLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQQQHFL 120

Query: 121 HPLHLSNDHHHNNNNIIPPTNHFADQSSPNKGIMELEPERMMKTLQLFPLNSIDETQGSD 180
           HPLHLSNDH++NNNNIIPP+NHFADQSS NKGIMELEPERMMKTLQLFPLNSIDETQGSD
Sbjct: 121 HPLHLSNDHNNNNNNIIPPSNHFADQSSTNKGIMELEPERMMKTLQLFPLNSIDETQGSD 180

Query: 181 DYHQFRVDGKQYEGATSFTYKIETKMDHPPLDLRLSFL 219
           DYHQFRVDGKQ+E ATSFTYKIETKMDHPPLDLRLSFL
Sbjct: 181 DYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 218

[Close]

BLAST of CmaCh15G001240 vs. ExPASy TrEMBL
Match: A0A5A7UN53 (WUSCHEL-related homeobox 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002150 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 6.6e-77
Identity = 169/218 (77.52%), Postives = 179/218 (82.11%), Query Frame = 0


Query: 8   MEDGVCSRIYVK-GGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 67
           MEDGVCSRIYVK GGGC GE  GGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS
Sbjct: 1   MEDGVCSRIYVKGGGGCSGE-SGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60

Query: 68  SDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLS 127
           SDQIQKISH LSFYGKIESKNVFYWFQNHKARERQKRRK+SL      Q QHF       
Sbjct: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLP-----QQQHF------- 120

Query: 128 NDHHHNNNNIIPPTN---HFADQSSPNKGIM-ELEPERMMKTLQLFPLNS-IDETQG-SD 187
                    I+PP++   HFADQS+ NKGIM +LEPERMMKTLQLFPLNS IDETQG  +
Sbjct: 121 ---------ILPPSSNLQHFADQSTTNKGIMDQLEPERMMKTLQLFPLNSTIDETQGLPE 180

Query: 188 DYHQFRVDGKQYEGATSFTYKIETKMDHPPLDLRLSFL 219
           D H +RV+GKQYE AT+FTYKIETKMDHPPLDLRLSFL
Sbjct: 181 DNHHYRVNGKQYEDATAFTYKIETKMDHPPLDLRLSFL 196

[Close]

BLAST of CmaCh15G001240 vs. ExPASy TrEMBL
Match: A0A1S3B2Z9 (WUSCHEL-related homeobox 5 OS=Cucumis melo OX=3656 GN=LOC103485558 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 6.6e-77
Identity = 169/218 (77.52%), Postives = 179/218 (82.11%), Query Frame = 0


Query: 8   MEDGVCSRIYVK-GGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 67
           MEDGVCSRIYVK GGGC GE  GGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS
Sbjct: 1   MEDGVCSRIYVKGGGGCSGE-SGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60

Query: 68  SDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLS 127
           SDQIQKISH LSFYGKIESKNVFYWFQNHKARERQKRRK+SL      Q QHF       
Sbjct: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLP-----QQQHF------- 120

Query: 128 NDHHHNNNNIIPPTN---HFADQSSPNKGIM-ELEPERMMKTLQLFPLNS-IDETQG-SD 187
                    I+PP++   HFADQS+ NKGIM +LEPERMMKTLQLFPLNS IDETQG  +
Sbjct: 121 ---------ILPPSSNLQHFADQSTTNKGIMDQLEPERMMKTLQLFPLNSTIDETQGLPE 180

Query: 188 DYHQFRVDGKQYEGATSFTYKIETKMDHPPLDLRLSFL 219
           D H +RV+GKQYE AT+FTYKIETKMDHPPLDLRLSFL
Sbjct: 181 DNHHYRVNGKQYEDATAFTYKIETKMDHPPLDLRLSFL 196

[Close]

BLAST of CmaCh15G001240 vs. ExPASy TrEMBL
Match: A0A6J1GMY2 (WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111455970 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 9.5e-76
Identity = 163/219 (74.43%), Postives = 182/219 (83.11%), Query Frame = 0


Query: 3   RKSINMEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGL 62
           + ++NM++G+ SR YVK  G GG+ GGG  GKGS SSKCGRWNPTAEQVKVLTELFRSGL
Sbjct: 2   KNNMNMDEGISSRFYVKPAGGGGD-GGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGL 61

Query: 63  RTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHP 122
           RTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVS+SLDH+H H H    
Sbjct: 62  RTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHH---- 121

Query: 123 LHLSNDHHHNNNNIIPP-TNHFA-DQSSPNK-GIMELEPERMMKTLQLFPLNSIDETQGS 182
                 H    + I+PP +N+FA DQS+ NK G MELEPERMMKTLQLFPLNSI ET+G 
Sbjct: 122 ------HQQQQHFILPPCSNYFADDQSTTNKGGTMELEPERMMKTLQLFPLNSIGETEGD 181

Query: 183 DDYHQFRVDGKQYEGATSFTYKIETKMDHPPLDLRLSFL 219
           +D HQFRV+GKQYE AT+FTYKI TKM+HPPLDLRLSFL
Sbjct: 182 ND-HQFRVNGKQYEEATAFTYKIGTKMEHPPLDLRLSFL 208

[Close]

BLAST of CmaCh15G001240 vs. NCBI nr
Match: XP_022993526.1 (WUSCHEL-related homeobox 5-like [Cucurbita maxima])

HSP 1 Score: 423.7 bits (1088), Expect = 9.6e-115
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 8   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 67
           MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS
Sbjct: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60

Query: 68  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLSN 127
           DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLSN
Sbjct: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLSN 120

Query: 128 DHHHNNNNIIPPTNHFADQSSPNKGIMELEPERMMKTLQLFPLNSIDETQGSDDYHQFRV 187
           DHHHNNNNIIPPTNHFADQSSPNKGIMELEPERMMKTLQLFPLNSIDETQGSDDYHQFRV
Sbjct: 121 DHHHNNNNIIPPTNHFADQSSPNKGIMELEPERMMKTLQLFPLNSIDETQGSDDYHQFRV 180

Query: 188 DGKQYEGATSFTYKIETKMDHPPLDLRLSFL 219
           DGKQYEGATSFTYKIETKMDHPPLDLRLSFL
Sbjct: 181 DGKQYEGATSFTYKIETKMDHPPLDLRLSFL 211

[Close]

BLAST of CmaCh15G001240 vs. NCBI nr
Match: XP_022939921.1 (WUSCHEL-related homeobox 5-like [Cucurbita moschata])

HSP 1 Score: 417.2 bits (1071), Expect = 9.0e-113
Identity = 210/218 (96.33%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   MSRKSINMEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRS 60
           MSRKSINMEDGVCSRIYVKGGGC GEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRS
Sbjct: 1   MSRKSINMEDGVCSRIYVKGGGCSGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRS 60

Query: 61  GLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFL 120
           GLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQ QHFL
Sbjct: 61  GLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQQQHFL 120

Query: 121 HPLHLSNDHHHNNNNIIPPTNHFADQSSPNKGIMELEPERMMKTLQLFPLNSIDETQGSD 180
           HPLHLSNDH++NNNNIIPP+NHFADQSS NKGIMELEPERMMKTLQLFPLNSIDETQGSD
Sbjct: 121 HPLHLSNDHNNNNNNIIPPSNHFADQSSTNKGIMELEPERMMKTLQLFPLNSIDETQGSD 180

Query: 181 DYHQFRVDGKQYEGATSFTYKIETKMDHPPLDLRLSFL 219
           DYHQFRVDGKQ+E ATSFTYKIETKMDHPPLDLRLSFL
Sbjct: 181 DYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 218

[Close]

BLAST of CmaCh15G001240 vs. NCBI nr
Match: XP_023549507.1 (WUSCHEL-related homeobox 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 415.6 bits (1067), Expect = 2.6e-112
Identity = 212/220 (96.36%), Postives = 214/220 (97.27%), Query Frame = 0


Query: 1   MSRKSINMEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRS 60
           MSRKSINMEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRS
Sbjct: 1   MSRKSINMEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRS 60

Query: 61  GLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFL 120
           GLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQ QHFL
Sbjct: 61  GLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQQQHFL 120

Query: 121 HPLHLSNDH--HHNNNNIIPPTNHFADQSSPNKGIMELEPERMMKTLQLFPLNSIDETQG 180
           HPLHLSNDH  ++NNNNIIPPTNHFADQSS NKGIMELEPERMMKTLQLFPLNSIDETQG
Sbjct: 121 HPLHLSNDHNNNNNNNNIIPPTNHFADQSSTNKGIMELEPERMMKTLQLFPLNSIDETQG 180

Query: 181 SDDYHQFRVDGKQYEGATSFTYKIETKMDHPPLDLRLSFL 219
           SDDYHQFRVDGK YE ATSFTYKIETKMDHPPLDLRLSFL
Sbjct: 181 SDDYHQFRVDGKHYEDATSFTYKIETKMDHPPLDLRLSFL 220

[Close]

BLAST of CmaCh15G001240 vs. NCBI nr
Match: KAG6578442.1 (WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 407.1 bits (1045), Expect = 9.3e-110
Identity = 208/218 (95.41%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 1   MSRKSINMEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRS 60
           MSRKSINMEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRS
Sbjct: 1   MSRKSINMEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRS 60

Query: 61  GLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFL 120
           GLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHS Q QHFL
Sbjct: 61  GLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFL 120

Query: 121 HPLHLSNDHHHNNNNIIPPTNHFADQSSPNKGIMELEPERMMKTLQLFPLNSIDETQGSD 180
           H LHLSNDH++NNNN IPP+NHFADQSS NKGIMELEPERMMKTLQLFPLNSIDETQGSD
Sbjct: 121 HSLHLSNDHNNNNNN-IPPSNHFADQSSTNKGIMELEPERMMKTLQLFPLNSIDETQGSD 180

Query: 181 DYHQFRVDGKQYEGATSFTYKIETKMDHPPLDLRLSFL 219
           DYHQFRVDGKQ+E ATSFTYKIETKMDHPPLDLRLSFL
Sbjct: 181 DYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 217

[Close]

BLAST of CmaCh15G001240 vs. NCBI nr
Match: KAG7016004.1 (WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 382.5 bits (981), Expect = 2.5e-102
Identity = 200/222 (90.09%), Postives = 204/222 (91.89%), Query Frame = 0


Query: 8   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 67
           MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS
Sbjct: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60

Query: 68  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLSN 127
           DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHS Q QHFLH LHLSN
Sbjct: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSN 120

Query: 128 DHHHNNNNIIPPTNH-----------FADQSSPNKGIMELEPERMMKTLQLFPLNSIDET 187
           DH++NNNN IPP+N            FADQSS NKGIMELEPERMMKTLQLFPLNSIDET
Sbjct: 121 DHNNNNNN-IPPSNRMFLTSFLSISDFADQSSTNKGIMELEPERMMKTLQLFPLNSIDET 180

Query: 188 QGSDDYHQFRVDGKQYEGATSFTYKIETKMDHPPLDLRLSFL 219
           QGSDDYHQFRVDGKQ+E ATSFTYKIETKMDHPPLDLRLSFL
Sbjct: 181 QGSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 221

[Close]

BLAST of CmaCh15G001240 vs. TAIR 10
Match: AT3G11260.1 (WUSCHEL related homeobox 5 )

HSP 1 Score: 153.3 bits (386), Expect = 2.3e-37
Identity = 101/209 (48.33%), Postives = 127/209 (60.77%), Query Frame = 0


Query: 18  VKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQL 77
           VKG    G   GG G      +KCGRWNPT EQ+K+LT+LFR+GLRTP++DQIQKIS +L
Sbjct: 5   VKGRSLRGNNNGGTG------TKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTEL 64

Query: 78  SFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLSNDHHHNNNNII 137
           SFYGKIESKNVFYWFQNHKARERQKRRK+S+  DH                HHH      
Sbjct: 65  SFYGKIESKNVFYWFQNHKARERQKRRKISIDFDH----------------HHHQ----- 124

Query: 138 PPTNHFADQSSPNKGIMELEPERMMKTLQLFPLNSIDETQGSDDYHQFRVDGKQYE---- 197
           P T    + S  +      E E++++TLQLFP+NS +++    D  + R + +  E    
Sbjct: 125 PSTRDVFEISEEDC----QEEEKVIETLQLFPVNSFEDSNSKVDKMRARGNNQYREYIRE 182

Query: 198 -GATSFT--YKIETKMDH-PPLDLRLSFL 219
              TSF+       +M+H PPLDLRLSFL
Sbjct: 185 TTTTSFSPYSSCGAEMEHPPPLDLRLSFL 182

[Close]

BLAST of CmaCh15G001240 vs. TAIR 10
Match: AT5G05770.1 (WUSCHEL related homeobox 7 )

HSP 1 Score: 125.2 bits (313), Expect = 6.6e-29
Identity = 67/93 (72.04%), Postives = 76/93 (81.72%), Query Frame = 0


Query: 21  GGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFY 80
           G C    GGGG G     +KCGRWNPT EQVK+LT+LF++GLRTPS+DQIQKIS +LSFY
Sbjct: 12  GLCNNNNGGGGTG-----AKCGRWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFY 71

Query: 81  GKIESKNVFYWFQNHKARERQKRRKVS-LSLDH 113
           GKIESKNVFYWFQNHKARERQK RK+S +  DH
Sbjct: 72  GKIESKNVFYWFQNHKARERQKCRKISTVKFDH 99

[Close]

BLAST of CmaCh15G001240 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-21
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 43  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQK 102
           RWNPT +Q++VL EL+R G RTPS+D IQ+I+ QL  YGKIE KNVFYWFQNHKARERQK
Sbjct: 76  RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135

Query: 103 RRK 106
           RR+
Sbjct: 136 RRR 138

[Close]

BLAST of CmaCh15G001240 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 8.6e-21
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 43  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQK 102
           RW PT EQ+ +L E++RSG+RTP++ QIQ+I+  L+FYG+IE KNVFYWFQNHKAR+RQK
Sbjct: 8   RWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQK 67

Query: 103 RRKVSLSLDHSHQHQ 118
            RK      H  QHQ
Sbjct: 68  LRKKLAKQLHQQQHQ 82

[Close]

BLAST of CmaCh15G001240 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 89.7 bits (221), Expect = 3.1e-18
Identity = 48/117 (41.03%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 36  SGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNH 95
           +G++   RWNPT +Q+ +L  L++ G+RTPS+DQIQ+I+ +L  YG IE KNVFYWFQNH
Sbjct: 7   AGTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNH 66

Query: 96  KARERQKRRKVSLSLDHS--HQHQHFLHP-------------LHLSNDHHHNNNNII 138
           KAR+RQK+++  ++  +   H+   F +P             L  ++DHH N +  +
Sbjct: 67  KARQRQKQKQERMAYFNRLLHKTSRFFYPPPCSNVGCVSPYYLQQASDHHMNQHGSV 123

The following BLAST results are available for this feature:

BLAST of CmaCh15G001240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H1D2	3.2e-36	48.33	WUSCHEL-related homeobox 5 OS=Arabidopsis thaliana OX=3702 GN=WOX5 PE=2 SV=1	[more]
Q9FFK0	9.2e-28	72.04	WUSCHEL-related homeobox 7 OS=Arabidopsis thaliana OX=3702 GN=WOX7 PE=2 SV=1	[more]
Q8W0F1	1.9e-25	43.78	WUSCHEL-related homeobox 9 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX9 PE=2...	[more]
Q6X7K0	2.4e-20	73.02	WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2	[more]
Q25AM2	7.1e-20	65.15	WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 S...	[more]

BLAST of CmaCh15G001240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JWK4	4.6e-115	100.00	WUSCHEL-related homeobox 5-like OS=Cucurbita maxima OX=3661 GN=LOC111489507 PE=3...	[more]
A0A6J1FH52	4.3e-113	96.33	WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111445643 PE...	[more]
A0A5A7UN53	6.6e-77	77.52	WUSCHEL-related homeobox 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3B2Z9	6.6e-77	77.52	WUSCHEL-related homeobox 5 OS=Cucumis melo OX=3656 GN=LOC103485558 PE=3 SV=1	[more]
A0A6J1GMY2	9.5e-76	74.43	WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111455970 PE...	[more]

BLAST of CmaCh15G001240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993526.1	9.6e-115	100.00	WUSCHEL-related homeobox 5-like [Cucurbita maxima]	[more]
XP_022939921.1	9.0e-113	96.33	WUSCHEL-related homeobox 5-like [Cucurbita moschata]	[more]
XP_023549507.1	2.6e-112	96.36	WUSCHEL-related homeobox 5-like [Cucurbita pepo subsp. pepo]	[more]
KAG6578442.1	9.3e-110	95.41	WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7016004.1	2.5e-102	90.09	WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmaCh15G001240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11260.1	2.3e-37	48.33	WUSCHEL related homeobox 5	[more]
AT5G05770.1	6.6e-29	72.04	WUSCHEL related homeobox 7	[more]
AT3G18010.1	1.7e-21	73.02	WUSCHEL related homeobox 1	[more]
AT2G28610.1	8.6e-21	61.33	Homeodomain-like superfamily protein	[more]
AT5G59340.1	3.1e-18	41.03	WUSCHEL related homeobox 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 39..106 e-value: 2.0E-4 score: 30.5
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 41..101 e-value: 1.9E-18 score: 66.0
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 37..102 score: 11.401915
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 43..103 e-value: 5.03559E-5 score: 37.9933
None	No IPR available	GENE3D	1.10.10.60		coord: 40..108 e-value: 8.5E-10 score: 40.1
None	No IPR available	PANTHER	PTHR45940:SF3	WUSCHEL-RELATED HOMEOBOX 7	coord: 28..205
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 28..205
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 42..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G001240.1	CmaCh15G001240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity