CmaCh14G020710 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G020710
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-H2 finger protein ATL67-like
Location	Cma_Chr14: 14374980 .. 14375549 (+)
RNA-Seq Expression	CmaCh14G020710
Synteny	CmaCh14G020710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATCTCCCCTTCTTCCTCCTCCTCCTATTACTCCTTCTCTAAGATCGGCCTCGGCTACGCCATTGCCATAGCCCTCGCCTTCCTCGTCCTCCTTTCCGCTCTTCTTCTCGCCTTCTACGTCTGCTGTCGCGCCTCCCGCTCCCGCTCCCGCTATCTCCACCGCCACCCCGCTCCCTCTCGTTCCGATGCCGGAATCATTCTCCCTCAGATCATCTTCGTCGCCGAGGACGACGCCTCTCCAGATCCCAACGATGATAACGGCGTCCTTGGCCTCGACCAGGCTGTCATTAACTCTTACCCTAAATTCCCCTTCTCCAGGGATAAATCCATGGCCGGAGCCGATTGCGTCTGCTCCATCTGCCTCTGTGAGTATAAGGACGCGGAGATGCTGAGGATGATGCCCGAGTGTCGACACTGCTTCCATCTCTGTTGCATCGATGCTTGGTTGAAGCTTAATTGCTCTTGTCCGGTTTGCCGGAATTCGCCACTCCCGACGCCGCTTTCCACTCCTCTTCAGGAGGTTGTGCCGCTCTCCCAATACATGGCGGATCGGAGAAGGAGATGA

mRNA sequence

ATGTCCATCTCCCCTTCTTCCTCCTCCTCCTATTACTCCTTCTCTAAGATCGGCCTCGGCTACGCCATTGCCATAGCCCTCGCCTTCCTCGTCCTCCTTTCCGCTCTTCTTCTCGCCTTCTACGTCTGCTGTCGCGCCTCCCGCTCCCGCTCCCGCTATCTCCACCGCCACCCCGCTCCCTCTCGTTCCGATGCCGGAATCATTCTCCCTCAGATCATCTTCGTCGCCGAGGACGACGCCTCTCCAGATCCCAACGATGATAACGGCGTCCTTGGCCTCGACCAGGCTGTCATTAACTCTTACCCTAAATTCCCCTTCTCCAGGGATAAATCCATGGCCGGAGCCGATTGCGTCTGCTCCATCTGCCTCTGTGAGTATAAGGACGCGGAGATGCTGAGGATGATGCCCGAGTGTCGACACTGCTTCCATCTCTGTTGCATCGATGCTTGGTTGAAGCTTAATTGCTCTTGTCCGGTTTGCCGGAATTCGCCACTCCCGACGCCGCTTTCCACTCCTCTTCAGGAGGTTGTGCCGCTCTCCCAATACATGGCGGATCGGAGAAGGAGATGA

Coding sequence (CDS)

ATGTCCATCTCCCCTTCTTCCTCCTCCTCCTATTACTCCTTCTCTAAGATCGGCCTCGGCTACGCCATTGCCATAGCCCTCGCCTTCCTCGTCCTCCTTTCCGCTCTTCTTCTCGCCTTCTACGTCTGCTGTCGCGCCTCCCGCTCCCGCTCCCGCTATCTCCACCGCCACCCCGCTCCCTCTCGTTCCGATGCCGGAATCATTCTCCCTCAGATCATCTTCGTCGCCGAGGACGACGCCTCTCCAGATCCCAACGATGATAACGGCGTCCTTGGCCTCGACCAGGCTGTCATTAACTCTTACCCTAAATTCCCCTTCTCCAGGGATAAATCCATGGCCGGAGCCGATTGCGTCTGCTCCATCTGCCTCTGTGAGTATAAGGACGCGGAGATGCTGAGGATGATGCCCGAGTGTCGACACTGCTTCCATCTCTGTTGCATCGATGCTTGGTTGAAGCTTAATTGCTCTTGTCCGGTTTGCCGGAATTCGCCACTCCCGACGCCGCTTTCCACTCCTCTTCAGGAGGTTGTGCCGCTCTCCCAATACATGGCGGATCGGAGAAGGAGATGA

Protein sequence

MSISPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRRRR

Homology

[Close]

BLAST of CmaCh14G020710 vs. ExPASy Swiss-Prot
Match: O82353 (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 8.2e-57
Identity = 123/198 (62.12%), Postives = 144/198 (72.73%), Query Frame = 0


Query: 4   SPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRS 63
           SP  + ++   + +G GY+IAIAL FLVLLS +LL+ Y+CCR SR R+  +      S  
Sbjct: 20  SPPQAGNHSYLTTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVE-----STG 79

Query: 64  DAG--IILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMA-------G 123
           D G  +ILP+IIFVAE+D + D    + V+GLDQAVINSYPKF FS+D S A       G
Sbjct: 80  DRGGSVILPRIIFVAEED-NEDLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGG 139

Query: 124 ADCVCSICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLP----TPLS 183
            D  CSICLCEYK+AEMLRMMPEC+H FHLCC+DAWLKLN SCPVCRNSPLP    TPLS
Sbjct: 140 GDTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLS 199

Query: 184 TPLQEVVPLSQYMADRRR 189
           TPL EVVPLSQY ADRRR
Sbjct: 200 TPLSEVVPLSQYAADRRR 211

[Close]

BLAST of CmaCh14G020710 vs. ExPASy Swiss-Prot
Match: Q9M313 (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.0e-51
Identity = 112/191 (58.64%), Postives = 136/191 (71.20%), Query Frame = 0


Query: 15  SKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSR--SRYLHRHPAPSRSDAGIILPQI 74
           + +GLGY+IAIAL FLVL+S ++L+ Y+CCRASR R  +   + +   S SD G+I+P+I
Sbjct: 22  TSLGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRI 81

Query: 75  IFVAEDDASPDPNDDNGVL-GLDQAVINSYPKFPFSRDKSMA----------GADCVCSI 134
           IFVAEDD   D    N V+ GLD +VINSYPKF F++D +            G +  CSI
Sbjct: 82  IFVAEDD---DLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSI 141

Query: 135 CLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLP----TPLSTPLQEVV 189
           CLCEY + EMLRMMPEC+H FH+ C+DAWLKLN SCPVCRNSPLP    TP STPL EVV
Sbjct: 142 CLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVV 201

[Close]

BLAST of CmaCh14G020710 vs. ExPASy Swiss-Prot
Match: Q8RX29 (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-27
Identity = 73/170 (42.94%), Postives = 94/170 (55.29%), Query Frame = 0


Query: 18  GLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSDAGIILPQIIFVAE 77
           G  Y I +++  L+L++ + L  Y C R   S S      P+ +  D+  I      V  
Sbjct: 63  GFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSS------PSQTNQDSTRIHHHHHHVII 122

Query: 78  DDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLCEYKDAEMLRMMPE 137
           D           V GLD+  I SYPK  +S  K    A C C+ICL +YK   +LR +P+
Sbjct: 123 D----------VVPGLDEDTIQSYPKILYSEAKGPTTASC-CAICLGDYKGKHLLRQLPD 182

Query: 138 CRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRR 188
           C H FHL CID WL+LN +CPVCR SPLPTPLSTPL EVVPL+  +A  R
Sbjct: 183 CNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLASSVAATR 215

[Close]

BLAST of CmaCh14G020710 vs. ExPASy Swiss-Prot
Match: Q9FL42 (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-26
Identity = 71/167 (42.51%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 15  SKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSDAGIILPQIIF 74
           S +GLGY IAIA++ LVL+S ++LA Y+C R S+S  R        + SD  + LP    
Sbjct: 9   SGVGLGYGIAIAVSILVLISFIMLASYICIR-SKSTGR------DEATSDVVLDLP---- 68

Query: 75  VAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGA-DCVCSICLCEYKDAEMLR 134
                 SP        LGLD+ VI SYP+      + +    +  CSICLC+Y+  E +R
Sbjct: 69  ------SPAAEVK---LGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVR 128

Query: 135 MMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLS 181
            +PEC HCFH  C+D WL+ + +CP+CRNSP P+ L+TPL ++VPL+
Sbjct: 129 CIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]

BLAST of CmaCh14G020710 vs. ExPASy Swiss-Prot
Match: Q9FG21 (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.3e-25
Identity = 69/173 (39.88%), Postives = 97/173 (56.07%), Query Frame = 0


Query: 18  GLGYAIAIALAFLVLLSALLLAFYVCCRASRSRS-RYLHRHPAPSRSDAGIILP-QIIFV 77
           GL Y I +++  L+L++ + L  Y C R+  S S     R     R   G + P Q  F 
Sbjct: 22  GLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQERFD 81

Query: 78  AEDDASPDPNDDNGVLGLDQAVINSYPKFP-------FSRDKSMAGADCVCSICLCEYKD 137
            EDD S     +  VLGL + VI  +PK P       +S  K  +   C CSICL +YK 
Sbjct: 82  FEDDESDTVVVE--VLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSC-CSICLADYKK 141

Query: 138 AEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQ 182
            +M+R++P+C H FH  C+D WL+L+ +CPVCR SPLP+P  TP+ +VVP S+
Sbjct: 142 MDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFSR 191

[Close]

BLAST of CmaCh14G020710 vs. ExPASy TrEMBL
Match: A0A6J1IUP0 (RING-H2 finger protein ATL67-like OS=Cucurbita maxima OX=3661 GN=LOC111480099 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.0e-103
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MSISPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAP 60
           MSISPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAP
Sbjct: 1   MSISPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAP 60

Query: 61  SRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCS 120
           SRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCS
Sbjct: 61  SRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCS 120

Query: 121 ICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLS 180
           ICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLS
Sbjct: 121 ICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLS 180

Query: 181 QYMADRRRR 190
           QYMADRRRR
Sbjct: 181 QYMADRRRR 189

[Close]

BLAST of CmaCh14G020710 vs. ExPASy TrEMBL
Match: A0A6J1E9N3 (RING-H2 finger protein ATL67-like OS=Cucurbita moschata OX=3662 GN=LOC111432045 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.3e-99
Identity = 184/189 (97.35%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MSISPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAP 60
           MSISPSSSSS YSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSR RYLHRHPAP
Sbjct: 1   MSISPSSSSSNYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRPRYLHRHPAP 60

Query: 61  SRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCS 120
           SRSDAGIILP+IIFVAEDDASPDPNDDNGV GLDQAVINSYPKFPFSRDKSMAGADCVCS
Sbjct: 61  SRSDAGIILPRIIFVAEDDASPDPNDDNGVFGLDQAVINSYPKFPFSRDKSMAGADCVCS 120

Query: 121 ICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLS 180
           ICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLN SCPVCRNSPLPTPLSTPLQEVVPLS
Sbjct: 121 ICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLS 180

Query: 181 QYMADRRRR 190
           QYMADRRRR
Sbjct: 181 QYMADRRRR 189

[Close]

BLAST of CmaCh14G020710 vs. ExPASy TrEMBL
Match: A0A6J1EYX3 (RING-H2 finger protein ATL67-like OS=Cucurbita moschata OX=3662 GN=LOC111440819 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.5e-85
Identity = 165/190 (86.84%), Postives = 176/190 (92.63%), Query Frame = 0


Query: 1   MSISPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRS-RYLHRHPA 60
           MS S ++SSS YSF+K+GLGYAIAIALAFLVLLSALLLAFYVCCRASRSR+ R     P 
Sbjct: 1   MSSSSTASSSNYSFAKLGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPP 60

Query: 61  PSRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVC 120
           PSRSDAGIILPQIIFVAEDD +PD +DDNGV+GLDQAVINSYPKFPFS+DKSMAGA+CVC
Sbjct: 61  PSRSDAGIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVC 120

Query: 121 SICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPL 180
           SICLCEYK+AEMLRMMPECRH FHLCCIDAWLKLN SCPVCRNSPLPTPLSTPLQEVVPL
Sbjct: 121 SICLCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPL 180

Query: 181 SQYMADRRRR 190
           SQYMADRRRR
Sbjct: 181 SQYMADRRRR 190

[Close]

BLAST of CmaCh14G020710 vs. ExPASy TrEMBL
Match: A0A0A0L7B6 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G121045 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 9.7e-85
Identity = 166/185 (89.73%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 6   SSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAP-SRSD 65
           SS SS YSFS+IGLGY+IAIALAFLVLLSALLLAFYVCCRA  SRSR+L R P P SRSD
Sbjct: 2   SSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRA--SRSRHLRRPPPPSSRSD 61

Query: 66  AGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLC 125
           AGIILPQIIFVAEDDA+PD +DDNGV+GLDQ VINSYPKFPFSRDKSMAGA+CVCSICLC
Sbjct: 62  AGIILPQIIFVAEDDAAPDRDDDNGVVGLDQTVINSYPKFPFSRDKSMAGANCVCSICLC 121

Query: 126 EYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQYMA 185
           EYKDAEMLRMMPECRH FHLCCIDAWLKLN SCPVCRNSPLPTPLSTPLQEVVPLSQYMA
Sbjct: 122 EYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMA 181

Query: 186 DRRRR 190
           DRRRR
Sbjct: 182 DRRRR 184

[Close]

BLAST of CmaCh14G020710 vs. ExPASy TrEMBL
Match: A0A6J1IH02 (RING-H2 finger protein ATL67-like OS=Cucurbita maxima OX=3661 GN=LOC111473352 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.2e-84
Identity = 162/187 (86.63%), Postives = 173/187 (92.51%), Query Frame = 0


Query: 4   SPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRS-RYLHRHPAPSR 63
           S ++SSS YSF+K+G GYAIAIALAFLVLLSALLLAFYVCCRASRSR+ R     P PSR
Sbjct: 3   SSTASSSNYSFAKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPSR 62

Query: 64  SDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSIC 123
           SDAGIILPQIIFVAEDD +PD +DDNGV+GLDQAVINSYPKFPFS+DKSMAGA+CVCSIC
Sbjct: 63  SDAGIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVCSIC 122

Query: 124 LCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQY 183
           LCEYK+AEMLRMMPECRH FHLCCIDAWLKLN SCPVCRNSPLPTPLSTPLQEVVPLSQY
Sbjct: 123 LCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQY 182

Query: 184 MADRRRR 190
           MADRRRR
Sbjct: 183 MADRRRR 189

[Close]

BLAST of CmaCh14G020710 vs. NCBI nr
Match: XP_022980826.1 (RING-H2 finger protein ATL67-like [Cucurbita maxima])

HSP 1 Score: 383.3 bits (983), Expect = 1.2e-102
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MSISPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAP 60
           MSISPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAP
Sbjct: 1   MSISPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAP 60

Query: 61  SRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCS 120
           SRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCS
Sbjct: 61  SRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCS 120

Query: 121 ICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLS 180
           ICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLS
Sbjct: 121 ICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLS 180

Query: 181 QYMADRRRR 190
           QYMADRRRR
Sbjct: 181 QYMADRRRR 189

[Close]

BLAST of CmaCh14G020710 vs. NCBI nr
Match: XP_022924604.1 (RING-H2 finger protein ATL67-like [Cucurbita moschata])

HSP 1 Score: 370.2 bits (949), Expect = 1.1e-98
Identity = 184/189 (97.35%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MSISPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAP 60
           MSISPSSSSS YSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSR RYLHRHPAP
Sbjct: 1   MSISPSSSSSNYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRPRYLHRHPAP 60

Query: 61  SRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCS 120
           SRSDAGIILP+IIFVAEDDASPDPNDDNGV GLDQAVINSYPKFPFSRDKSMAGADCVCS
Sbjct: 61  SRSDAGIILPRIIFVAEDDASPDPNDDNGVFGLDQAVINSYPKFPFSRDKSMAGADCVCS 120

Query: 121 ICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLS 180
           ICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLN SCPVCRNSPLPTPLSTPLQEVVPLS
Sbjct: 121 ICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLS 180

Query: 181 QYMADRRRR 190
           QYMADRRRR
Sbjct: 181 QYMADRRRR 189

[Close]

BLAST of CmaCh14G020710 vs. NCBI nr
Match: KAG6582637.1 (RING-H2 finger protein ATL68, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019032.1 RING-H2 finger protein ATL68, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 367.9 bits (943), Expect = 5.4e-98
Identity = 186/191 (97.38%), Postives = 186/191 (97.38%), Query Frame = 0


Query: 1   MSISPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRS--RYLHRHP 60
           MSISPSSSSS YSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRS  RYLHRHP
Sbjct: 1   MSISPSSSSSNYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRPRYLHRHP 60

Query: 61  APSRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCV 120
           APSRSDAGIILPQIIFVAEDDASPDPNDD GVLGLDQAVINSYPKFPFSRDKSMAGADCV
Sbjct: 61  APSRSDAGIILPQIIFVAEDDASPDPNDDTGVLGLDQAVINSYPKFPFSRDKSMAGADCV 120

Query: 121 CSICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVP 180
           CSICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLN SCPVCRNSPLPTPLSTPLQEVVP
Sbjct: 121 CSICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVP 180

Query: 181 LSQYMADRRRR 190
           LSQYMADRRRR
Sbjct: 181 LSQYMADRRRR 191

[Close]

BLAST of CmaCh14G020710 vs. NCBI nr
Match: XP_023528019.1 (LOW QUALITY PROTEIN: RING-H2 finger protein ATL67 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.4 bits (895), Expect = 2.0e-92
Identity = 174/178 (97.75%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 14  FSKIGLGYAIAIALAFLVLLSALLLAFYVCCRA--SRSRSRYLHRHPAPSRSDAGIILPQ 73
           FSKIGLGYAIAIALAFLVLLSALLLAFYVCCRA  SRSRSRYLHRH APSRSDAGIILPQ
Sbjct: 34  FSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRSRYLHRHSAPSRSDAGIILPQ 93

Query: 74  IIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLCEYKDAEM 133
           IIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLCEYKDAEM
Sbjct: 94  IIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLCEYKDAEM 153

Query: 134 LRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRRRR 190
           LRMMPECRHCFHLCCIDAWLKLN SCPVCRNSPLPTPLSTPLQEVVPLSQYMADRRRR
Sbjct: 154 LRMMPECRHCFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRRRR 211

[Close]

BLAST of CmaCh14G020710 vs. NCBI nr
Match: XP_022933391.1 (RING-H2 finger protein ATL67-like [Cucurbita moschata])

HSP 1 Score: 325.5 bits (833), Expect = 3.1e-85
Identity = 165/190 (86.84%), Postives = 176/190 (92.63%), Query Frame = 0


Query: 1   MSISPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRS-RYLHRHPA 60
           MS S ++SSS YSF+K+GLGYAIAIALAFLVLLSALLLAFYVCCRASRSR+ R     P 
Sbjct: 1   MSSSSTASSSNYSFAKLGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPP 60

Query: 61  PSRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVC 120
           PSRSDAGIILPQIIFVAEDD +PD +DDNGV+GLDQAVINSYPKFPFS+DKSMAGA+CVC
Sbjct: 61  PSRSDAGIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVC 120

Query: 121 SICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPL 180
           SICLCEYK+AEMLRMMPECRH FHLCCIDAWLKLN SCPVCRNSPLPTPLSTPLQEVVPL
Sbjct: 121 SICLCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPL 180

Query: 181 SQYMADRRRR 190
           SQYMADRRRR
Sbjct: 181 SQYMADRRRR 190

[Close]

BLAST of CmaCh14G020710 vs. TAIR 10
Match: AT2G46160.1 (RING/U-box superfamily protein )

HSP 1 Score: 221.5 bits (563), Expect = 5.8e-58
Identity = 123/198 (62.12%), Postives = 144/198 (72.73%), Query Frame = 0


Query: 4   SPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRS 63
           SP  + ++   + +G GY+IAIAL FLVLLS +LL+ Y+CCR SR R+  +      S  
Sbjct: 20  SPPQAGNHSYLTTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVE-----STG 79

Query: 64  DAG--IILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMA-------G 123
           D G  +ILP+IIFVAE+D + D    + V+GLDQAVINSYPKF FS+D S A       G
Sbjct: 80  DRGGSVILPRIIFVAEED-NEDLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGG 139

Query: 124 ADCVCSICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLP----TPLS 183
            D  CSICLCEYK+AEMLRMMPEC+H FHLCC+DAWLKLN SCPVCRNSPLP    TPLS
Sbjct: 140 GDTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLS 199

Query: 184 TPLQEVVPLSQYMADRRR 189
           TPL EVVPLSQY ADRRR
Sbjct: 200 TPLSEVVPLSQYAADRRR 211

[Close]

BLAST of CmaCh14G020710 vs. TAIR 10
Match: AT3G61550.1 (RING/U-box superfamily protein )

HSP 1 Score: 203.0 bits (515), Expect = 2.1e-52
Identity = 112/191 (58.64%), Postives = 136/191 (71.20%), Query Frame = 0


Query: 15  SKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSR--SRYLHRHPAPSRSDAGIILPQI 74
           + +GLGY+IAIAL FLVL+S ++L+ Y+CCRASR R  +   + +   S SD G+I+P+I
Sbjct: 22  TSLGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRI 81

Query: 75  IFVAEDDASPDPNDDNGVL-GLDQAVINSYPKFPFSRDKSMA----------GADCVCSI 134
           IFVAEDD   D    N V+ GLD +VINSYPKF F++D +            G +  CSI
Sbjct: 82  IFVAEDD---DLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSI 141

Query: 135 CLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLP----TPLSTPLQEVV 189
           CLCEY + EMLRMMPEC+H FH+ C+DAWLKLN SCPVCRNSPLP    TP STPL EVV
Sbjct: 142 CLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVV 201

[Close]

BLAST of CmaCh14G020710 vs. TAIR 10
Match: AT2G35910.1 (RING/U-box superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 7.4e-29
Identity = 73/170 (42.94%), Postives = 94/170 (55.29%), Query Frame = 0


Query: 18  GLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSDAGIILPQIIFVAE 77
           G  Y I +++  L+L++ + L  Y C R   S S      P+ +  D+  I      V  
Sbjct: 63  GFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSS------PSQTNQDSTRIHHHHHHVII 122

Query: 78  DDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLCEYKDAEMLRMMPE 137
           D           V GLD+  I SYPK  +S  K    A C C+ICL +YK   +LR +P+
Sbjct: 123 D----------VVPGLDEDTIQSYPKILYSEAKGPTTASC-CAICLGDYKGKHLLRQLPD 182

Query: 138 CRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRR 188
           C H FHL CID WL+LN +CPVCR SPLPTPLSTPL EVVPL+  +A  R
Sbjct: 183 CNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLASSVAATR 215

[Close]

BLAST of CmaCh14G020710 vs. TAIR 10
Match: AT5G07040.1 (RING/U-box superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 71/167 (42.51%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 15  SKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSDAGIILPQIIF 74
           S +GLGY IAIA++ LVL+S ++LA Y+C R S+S  R        + SD  + LP    
Sbjct: 9   SGVGLGYGIAIAVSILVLISFIMLASYICIR-SKSTGR------DEATSDVVLDLP---- 68

Query: 75  VAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGA-DCVCSICLCEYKDAEMLR 134
                 SP        LGLD+ VI SYP+      + +    +  CSICLC+Y+  E +R
Sbjct: 69  ------SPAAEVK---LGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVR 128

Query: 135 MMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLS 181
            +PEC HCFH  C+D WL+ + +CP+CRNSP P+ L+TPL ++VPL+
Sbjct: 129 CIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]

BLAST of CmaCh14G020710 vs. TAIR 10
Match: AT5G06490.1 (RING/U-box superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 5.9e-26
Identity = 69/173 (39.88%), Postives = 97/173 (56.07%), Query Frame = 0


Query: 18  GLGYAIAIALAFLVLLSALLLAFYVCCRASRSRS-RYLHRHPAPSRSDAGIILP-QIIFV 77
           GL Y I +++  L+L++ + L  Y C R+  S S     R     R   G + P Q  F 
Sbjct: 22  GLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQERFD 81

Query: 78  AEDDASPDPNDDNGVLGLDQAVINSYPKFP-------FSRDKSMAGADCVCSICLCEYKD 137
            EDD S     +  VLGL + VI  +PK P       +S  K  +   C CSICL +YK 
Sbjct: 82  FEDDESDTVVVE--VLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSC-CSICLADYKK 141

Query: 138 AEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQ 182
            +M+R++P+C H FH  C+D WL+L+ +CPVCR SPLP+P  TP+ +VVP S+
Sbjct: 142 MDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFSR 191

The following BLAST results are available for this feature:

BLAST of CmaCh14G020710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82353	8.2e-57	62.12	RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1	[more]
Q9M313	3.0e-51	58.64	RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1	[more]
Q8RX29	1.0e-27	42.94	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1	[more]
Q9FL42	1.5e-26	42.51	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 P...	[more]
Q9FG21	8.3e-25	39.88	Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 P...	[more]

BLAST of CmaCh14G020710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IUP0	6.0e-103	100.00	RING-H2 finger protein ATL67-like OS=Cucurbita maxima OX=3661 GN=LOC111480099 PE...	[more]
A0A6J1E9N3	5.3e-99	97.35	RING-H2 finger protein ATL67-like OS=Cucurbita moschata OX=3662 GN=LOC111432045 ...	[more]
A0A6J1EYX3	1.5e-85	86.84	RING-H2 finger protein ATL67-like OS=Cucurbita moschata OX=3662 GN=LOC111440819 ...	[more]
A0A0A0L7B6	9.7e-85	89.73	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G121045 P...	[more]
A0A6J1IH02	2.2e-84	86.63	RING-H2 finger protein ATL67-like OS=Cucurbita maxima OX=3661 GN=LOC111473352 PE...	[more]

BLAST of CmaCh14G020710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980826.1	1.2e-102	100.00	RING-H2 finger protein ATL67-like [Cucurbita maxima]	[more]
XP_022924604.1	1.1e-98	97.35	RING-H2 finger protein ATL67-like [Cucurbita moschata]	[more]
KAG6582637.1	5.4e-98	97.38	RING-H2 finger protein ATL68, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_023528019.1	2.0e-92	97.75	LOW QUALITY PROTEIN: RING-H2 finger protein ATL67 [Cucurbita pepo subsp. pepo]	[more]
XP_022933391.1	3.1e-85	86.84	RING-H2 finger protein ATL67-like [Cucurbita moschata]	[more]

BLAST of CmaCh14G020710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46160.1	5.8e-58	62.12	RING/U-box superfamily protein	[more]
AT3G61550.1	2.1e-52	58.64	RING/U-box superfamily protein	[more]
AT2G35910.1	7.4e-29	42.94	RING/U-box superfamily protein	[more]
AT5G07040.1	1.1e-27	42.51	RING/U-box superfamily protein	[more]
AT5G06490.1	5.9e-26	39.88	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 119..160 e-value: 0.0053 score: 26.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 119..161 e-value: 1.7E-8 score: 34.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 119..161 score: 11.943417
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 83..165 e-value: 2.6E-19 score: 70.7
IPR044289	RING-H2 finger protein ATL67/ATL68/ATL70	PANTHER	PTHR46592	RING-H2 FINGER PROTEIN ATL67	coord: 6..189
None	No IPR available	PANTHER	PTHR46592:SF6	RING-H2 FINGER PROTEIN ATL67	coord: 6..189
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 112..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G020710.1	CmaCh14G020710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005622	intracellular anatomical structure
molecular_function	GO:0016740	transferase activity