CmaCh14G020340 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAAAACCCCAAAATTTGCATTCCATTCGATTCCAACACACAACTGAATTTCGTTTCTCCCTCTGATCTTCCACTCCTACTTCTCTAGAAACTGGACGTGGTTTCAAAACTGAACATGTCCCCAGACAATCCCGGTGAAGACGCCGGTGTTTCTGGATTTGAATCCCAAGACACGGAGCCCCACTATGAGGTTGAAGAGCTGGAACTTGAAGTGAATCAAATAGCTCAGAGGATTCATCACTACAGATCCACTCTGTCGGCTCAGCTAAAGTCCTCCTTCTTTTCATTACTCGAGTCCTCGAGGCCTCTCCCCGTTGGAGCCTCGGAGCTGGGAACATCTGCTGCTCCTCCGGATCATGAAGGTCGGATTCTGTGCCTCTAATTTTATTTAGTTGCTTCACGTTTTTCTTTCTTTCTTGCTTGGAACTGGTAGATTTGCTGACTGAGAAAATGAAGTGAAAGTTTCTTTGTTTTGAATACACATTTAGAAGTGTTAAATTGGGGCGAGTGGAATGCATGTTGTTCTGAATTATTTGATCTGCAAGTTCTACATGTTCTACTGCCAATTCAGGTAGATAGAAGCTTTCTTTTGGCTATTGAACAAGGCAACATTATGTAACCAGCGAAGGCTTCTGCCTAACCAAACTGTCTTTCTGTTTCATTCCCTTCTCTGTCCTTCCTGTAAATTACATTGGGTGAAGGCTTCTGTTCTTCTGTTGGTTGTAGTTTATAAAGTATGATATTTGTTGATTGTTCGTTTAAGTTCTTAAGAAATATTTGATGATATTTTTATATGTTTAATTTATGATCTATGTTCAAGTGAGTTTAGTTCTCAAAAGTGAGCATAGCTCAACAGTTCTCGACATGCATTTCTTCTCAAAGTTTTAGAATCAAATTCTCATTCCCCACTTATTATACTAAAAAAGTGAGTGAGTTTAGTTAGACGGTAACTCCTCACTACTTTTGAAGCTTTTAGGCCATTTGGGAAAGCACACCATTAAATCGAGCTAGTTTTTCACTATGTAGGCTGTTCTTGCTGTTTGGGGGTGAGTCTATCAACCTCAGGGGGTAATTCTTTCAGTAACAATCATTCTAATGCAGCTGTTGCATCACAAGTTAAACAAGAAAGACATAATTCTTGCTTAAAGCCAATTAGATCTTAGGCAGTCCCATGGGAGCTCTGAGTTGAAAGAAATTCTAGGACTTTACTAGATGATCTTTTTGGTGTACCCTTTGTTGTATTTTTGTTGATTCGGGTCATTTTTTGATGCATATTTCGATCGATTATGGCAACCTATTATTCGAGCAAGTATTAACCTTTTGGACTCAGTGAGCTTATTCTATGGTAATGAAGCATTATTTCCTACGAACTTTTATTCTGATTGAGAAATCACTGTCTTTTTATGCAGATGATGAACAAACCACTACAAGAGGCGAAGGCACAGTTCATGAAGAGGGATTAGAAACTGCGAAGAAGATACAGTTGCTTGAAGATAAAATATCAAGTAATATCATCCTGATCCCTACAGTTCTTAAGAGAATGAAAGACTGTATTTCAACTATTGACAATTTGGCTTCTTATAATGGGGTCATTCATCCTGCATTCAAAAGGAAAAAAACTAGCTGAATTTAAATCGTACCTGGCTGTTACTTTACAAGCGAGTCCCGAGTGTCGTACGGTTATCGAGTTGGATGTGTAGTGTATTGATCTTTACATTCTGTTGTCGAAAGGGCTGATTTCTCAACCATTTGCTTCCTGGTATGTAACATAACCTCCTGTCTATAACGTTATTGAAGGCTAGTTTTCCCTCTGTTGCTGTATAAAGTTCTTGAAATATTGAAATAGGAAGTTCTACTCTAAAGTTCTACTC CCAAAACCCCAAAATTTGCATTCCATTCGATTCCAACACACAACTGAATTTCGTTTCTCCCTCTGATCTTCCACTCCTACTTCTCTAGAAACTGGACGTGGTTTCAAAACTGAACATGTCCCCAGACAATCCCGGTGAAGACGCCGGTGTTTCTGGATTTGAATCCCAAGACACGGAGCCCCACTATGAGGTTGAAGAGCTGGAACTTGAAGTGAATCAAATAGCTCAGAGGATTCATCACTACAGATCCACTCTGTCGGCTCAGCTAAAGTCCTCCTTCTTTTCATTACTCGAGTCCTCGAGGCCTCTCCCCGTTGGAGCCTCGGAGCTGGGAACATCTGCTGCTCCTCCGGATCATGAAGATGATGAACAAACCACTACAAGAGGCGAAGGCACAGTTCATGAAGAGGGATTAGAAACTGCGAAGAAGATACAGTTGCTTGAAGATAAAATATCAAGTAATATCATCCTGATCCCTACAGTTCTTAAGAGAATGAAAGACTGTATTTCAACTATTGACAATTTGGCTTCTTATAATGGGGTCATTCATCCTGCATTCAAAAGGAAAAAAACTAGCTGAATTTAAATCGTACCTGGCTGTTACTTTACAAGCGAGTCCCGAGTGTCGTACGGTTATCGAGTTGGATGTGTAGTGTATTGATCTTTACATTCTGTTGTCGAAAGGGCTGATTTCTCAACCATTTGCTTCCTGGTATGTAACATAACCTCCTGTCTATAACGTTATTGAAGGCTAGTTTTCCCTCTGTTGCTGTATAAAGTTCTTGAAATATTGAAATAGGAAGTTCTACTCTAAAGTTCTACTC ATGTCCCCAGACAATCCCGGTGAAGACGCCGGTGTTTCTGGATTTGAATCCCAAGACACGGAGCCCCACTATGAGGTTGAAGAGCTGGAACTTGAAGTGAATCAAATAGCTCAGAGGATTCATCACTACAGATCCACTCTGTCGGCTCAGCTAAAGTCCTCCTTCTTTTCATTACTCGAGTCCTCGAGGCCTCTCCCCGTTGGAGCCTCGGAGCTGGGAACATCTGCTGCTCCTCCGGATCATGAAGATGATGAACAAACCACTACAAGAGGCGAAGGCACAGTTCATGAAGAGGGATTAGAAACTGCGAAGAAGATACAGTTGCTTGAAGATAAAATATCAAGTAATATCATCCTGATCCCTACAGTTCTTAAGAGAATGAAAGACTGTATTTCAACTATTGACAATTTGGCTTCTTATAATGGGGTCATTCATCCTGCATTCAAAAGGAAAAAAACTAGCTGA MSPDNPGEDAGVSGFESQDTEPHYEVEELELEVNQIAQRIHHYRSTLSAQLKSSFFSLLESSRPLPVGASELGTSAAPPDHEDDEQTTTRGEGTVHEEGLETAKKIQLLEDKISSNIILIPTVLKRMKDCISTIDNLASYNGVIHPAFKRKKTS Homology
BLAST of CmaCh14G020340 vs. ExPASy TrEMBL
Match: A0A6J1IZA2 (uncharacterized protein LOC111479807 OS=Cucurbita maxima OX=3661 GN=LOC111479807 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.1e-77 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CmaCh14G020340 vs. ExPASy TrEMBL
Match: A0A6J1ECS3 (uncharacterized protein LOC111431995 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431995 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 2.0e-72 Identity = 147/154 (95.45%), Postives = 149/154 (96.75%), Query Frame = 0
BLAST of CmaCh14G020340 vs. ExPASy TrEMBL
Match: A0A0A0L8X5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122450 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 7.2e-54 Identity = 125/155 (80.65%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of CmaCh14G020340 vs. ExPASy TrEMBL
Match: A0A6J1IGZ6 (uncharacterized protein LOC111473350 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473350 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53 Identity = 121/155 (78.06%), Postives = 131/155 (84.52%), Query Frame = 0
BLAST of CmaCh14G020340 vs. ExPASy TrEMBL
Match: A0A6J1FKW2 (uncharacterized protein LOC111444897 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444897 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 6.1e-53 Identity = 119/155 (76.77%), Postives = 130/155 (83.87%), Query Frame = 0
BLAST of CmaCh14G020340 vs. NCBI nr
Match: XP_022980439.1 (uncharacterized protein LOC111479807 [Cucurbita maxima]) HSP 1 Score: 298.1 bits (762), Expect = 4.3e-77 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CmaCh14G020340 vs. NCBI nr
Match: KAG6582609.1 (hypothetical protein SDJN03_22611, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019000.1 hypothetical protein SDJN02_20877, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 287.3 bits (734), Expect = 7.6e-74 Identity = 151/157 (96.18%), Postives = 153/157 (97.45%), Query Frame = 0
BLAST of CmaCh14G020340 vs. NCBI nr
Match: XP_022924543.1 (uncharacterized protein LOC111431995 isoform X1 [Cucurbita moschata]) HSP 1 Score: 281.6 bits (719), Expect = 4.2e-72 Identity = 147/154 (95.45%), Postives = 149/154 (96.75%), Query Frame = 0
BLAST of CmaCh14G020340 vs. NCBI nr
Match: XP_023529150.1 (uncharacterized protein LOC111791880 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 278.1 bits (710), Expect = 4.6e-71 Identity = 146/154 (94.81%), Postives = 150/154 (97.40%), Query Frame = 0
BLAST of CmaCh14G020340 vs. NCBI nr
Match: XP_023529149.1 (uncharacterized protein LOC111791880 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 265.8 bits (678), Expect = 2.4e-67 Identity = 146/175 (83.43%), Postives = 150/175 (85.71%), Query Frame = 0
BLAST of CmaCh14G020340 vs. TAIR 10
Match: AT4G00525.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 6.3e-10 Identity = 50/142 (35.21%), Postives = 76/142 (53.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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