CmaCh14G020180 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G020180
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	4HBT domain-containing protein
Location	Cma_Chr14: 14111425 .. 14113622 (-)
RNA-Seq Expression	CmaCh14G020180
Synteny	CmaCh14G020180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAACCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCGTTAATCTTCGACTCTCCGACGATTCAGATAAAGGATATGTCTGAAGAGGACCTACGCGGGACTATAGAATTGCTCAATGGATTGAGCGGTTCCGGCCAAATTCCGGACGATTGCAACACCAAGGGATTCTATTCCGATATCATTCGCGGTCATCTCTGGCAGCGCCGCCTCGAACGAGGCCGTCTGACCTACCTCCTCTCCGTCAAACCTGCTGTATCCGTAATTTCTTAATTCTCCATCCAGATTTGTTTTCTCATCGAATTTAGGAGAAATTTGGTATGCGGTTTCTAATACTGTGCGTTCCTTGTGTTGCGTCTGATTTGAATCGAAACAATATCTTGCGGAACTTGAAATTCGATGTTTGATTTGAATCGAAGCAATATCTTTGAGTTCTTGAAAATTCATGCTGAGAAAATTTGGTGCCTGATTTGAATCGAAACGGTATCTATTGGATCTTGAAAACTTAGTATCGGTCTGTTTGAATTTTGATTGCTGAGATTTTTCAAATTCTCTTCATCTGCTTCTATCAGCTTTCGGTCAATATTGTTTCCATTCACATTAAACAGAGATATCTATTGTATAATTTCAGAATCGCTATGGTTTTCTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCCCGAACTGTCATGGCAGAGGATAAGGAGTTATTTCTTGGGGAACTAAGCATCTCTTATCTCTCAGGCGCTCCACGAAATGTGAGTAAAATTTAAGTTACTGTTGTGCTTCCTCCTGATTATTTGAGTAGGTTAGTTAAGTTGACCGAATTGTCTACCGAATTGACCAAAACTGAATCGAACCTAAAGAATCCAACAAAACTAACCAAAATTGAAATGAGCTAGTTGAACCAACAAAATCCGAACGAATCATCAAGAATGACACTTCAAATTGAATGAACTGAATTGGTTAATTCAGCTGGTTTTCTTGGGATTTTATTTTTTCTGTTTCGAAAGCTGGGAAGTTTATAATAGAAATTGAATGTTGAGATTTCTCAGATGATAGAGCCCTGAGAAACTGAGAATGTTTTCCTGGACCAGCAAACTTTTGGGTACCCATGCATGGGCTGAAGGGTCGCATGAATCTGTCTGTGGCCTATAAATTTGGATGGGACCACTTATCTTCTTATGATTTGAAACTCATCCTACCATTGTGCTTAATTGTTTATTATTGGTTGGGGTATTCACTTCCAACAATCTTGCCCTTCATAAGTTTTCATCTGGATTCTGAGTTTCTAATTGAGGGCACTCTCATTGAGGGATTAAGAATTAAACGATAATTGTCAAAACTTTATAATATTCTTGATGTCAACATCAAAACTAGAACCCACAACTGGGACCGAGTTCGCTTGGGTGTTATAGGATGGATACAAATATAGTAGTTTGTATGATGTGAATAAGAACGGTCTTAGCGTATAACATAGAAAATTGTATGACCAAACAAATAGGACAGAGTAAACATAGTTTTGAATGTTCAAGTAGCTTTACTTATGATGATAATATCCAAGCTTGACATACATTTTACTCGATTATTTGTCCCGGCCTCGATACTTTAGCAAGGTGCGTTATTTATAAAAAAAACCGTTCTTGCAGGCAGAGGTCATAATCGATGCTTCTATTTTAAGGAGTGGAAAACATTTGAATGTAGTTGCTATAGATTTCAGACTTCAAAAGACAGGAAAGTTGATCTACACAGCTCGTTCTACCCTTTATAACATGCCAATGGCAAAGTTGTAAATATCTCCAACAATCTCGAGTTTGTATTCAGGTTGAATAATCGTGTCAAATGTATTTACTATTGCAAAGTTGGAAAGAGTAGGGAAATGTATGGATTAGATGCTTTTGATTATTGTCCTTGTATATTTATTTACAATTTGTAGGAAAAAAGTGGAAGCTTTGGTTCAGTTTTGCAATCAATGGTGAACCTATTGATAATTGAATTAAATAAATAATAATATTTATACATTAG

mRNA sequence

ATGGCGAAACCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCGTTAATCTTCGACTCTCCGACGATTCAGATAAAGGATATGTCTGAAGAGGACCTACGCGGGACTATAGAATTGCTCAATGGATTGAGCGGTTCCGGCCAAATTCCGGACGATTGCAACACCAAGGGATTCTATTCCGATATCATTCGCGGTCATCTCTGGCAGCGCCGCCTCGAACGAGGCCGTCTGACCTACCTCCTCTCCGTCAAACCTGCTGTATCCAATCGCTATGGTTTTCTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCCCGAACTGTCATGGCAGAGGATAAGGAGTTATTTCTTGGGGAACTAAGCATCTCTTATCTCTCAGGCGCTCCACGAAATGCAGAGGTCATAATCGATGCTTCTATTTTAAGGAGTGGAAAACATTTGAATGTAGTTGCTATAGATTTCAGACTTCAAAAGACAGGAAAGTTGATCTACACAGCTCGTTCTACCCTTTATAACATGCCAATGGCAAAGTTGTAAATATCTCCAACAATCTCGAGTTTGTATTCAGGTTGAATAATCGTGTCAAATGTATTTACTATTGCAAAGTTGGAAAGAGTAGGGAAATGTATGGATTAGATGCTTTTGATTATTGTCCTTGTATATTTATTTACAATTTGTAGGAAAAAAGTGGAAGCTTTGGTTCAGTTTTGCAATCAATGGTGAACCTATTGATAATTGAATTAAATAAATAATAATATTTATACATTAG

Coding sequence (CDS)

ATGGCGAAACCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCGTTAATCTTCGACTCTCCGACGATTCAGATAAAGGATATGTCTGAAGAGGACCTACGCGGGACTATAGAATTGCTCAATGGATTGAGCGGTTCCGGCCAAATTCCGGACGATTGCAACACCAAGGGATTCTATTCCGATATCATTCGCGGTCATCTCTGGCAGCGCCGCCTCGAACGAGGCCGTCTGACCTACCTCCTCTCCGTCAAACCTGCTGTATCCAATCGCTATGGTTTTCTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCCCGAACTGTCATGGCAGAGGATAAGGAGTTATTTCTTGGGGAACTAAGCATCTCTTATCTCTCAGGCGCTCCACGAAATGCAGAGGTCATAATCGATGCTTCTATTTTAAGGAGTGGAAAACATTTGAATGTAGTTGCTATAGATTTCAGACTTCAAAAGACAGGAAAGTTGATCTACACAGCTCGTTCTACCCTTTATAACATGCCAATGGCAAAGTTGTAA

Protein sequence

MAKPSSSATPSSSATPSSSATPSSSETPSSSATPSSSATPSSSATPSSSETPSSSATPSSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL

Homology

[Close]

BLAST of CmaCh14G020180 vs. ExPASy TrEMBL
Match: A0A6J1IR82 (uncharacterized protein LOC111479273 OS=Cucurbita maxima OX=3661 GN=LOC111479273 PE=3 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.3e-112
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MAKPSSSATPSSSATPSSSATPSSSETPSSSATPSSSATPSSSATPSSSETPSSSATPSS 60
           MAKPSSSATPSSSATPSSSATPSSSETPSSSATPSSSATPSSSATPSSSETPSSSATPSS
Sbjct: 1   MAKPSSSATPSSSATPSSSATPSSSETPSSSATPSSSATPSSSATPSSSETPSSSATPSS 60

Query: 61  SETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLWQR 120
           SETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLWQR
Sbjct: 61  SETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLWQR 120

Query: 121 RLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISY 180
           RLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISY
Sbjct: 121 RLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISY 180

Query: 181 LSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
           LSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL
Sbjct: 181 LSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 234

[Close]

BLAST of CmaCh14G020180 vs. ExPASy TrEMBL
Match: A0A6J1EC92 (acyl-coenzyme A thioesterase 13-like OS=Cucurbita moschata OX=3662 GN=LOC111431890 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 4.0e-88
Identity = 172/179 (96.09%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 56  ATPSSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRG 115
           A PSSS TPSLIFDSPTIQIKD+SEEDLRGTIELLNGL GSGQIPDDCNTKGFYSDIIRG
Sbjct: 2   AKPSSSATPSLIFDSPTIQIKDVSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSDIIRG 61

Query: 116 HLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGE 175
           HL QRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGE
Sbjct: 62  HLRQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGE 121

Query: 176 LSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
           LSISYLSGAP NAEVIIDASILRSGKHLNVVAIDFRLQKTGKL+YTARSTLYNMPMAKL
Sbjct: 122 LSISYLSGAPPNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLVYTARSTLYNMPMAKL 180

[Close]

BLAST of CmaCh14G020180 vs. ExPASy TrEMBL
Match: A0A5A7U3Z9 (Acyl-coenzyme A thioesterase 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004480 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.3e-72
Identity = 142/181 (78.45%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 54  SSATPSSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDII 113
           SS++ SSSE PSLIF SPTIQIK +SEEDLR TI++ NGL+GSGQIPDDC+TK FYS I 
Sbjct: 4   SSSSSSSSEIPSLIFQSPTIQIKGISEEDLRETIQMFNGLTGSGQIPDDCDTKAFYSHIT 63

Query: 114 RGHLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFL 173
           RGHL Q R ERGRLTYLL VKPAVSN YG+LHGGFVAAAAEF SIACARTV+ EDK+LF+
Sbjct: 64  RGHLRQLRRERGRLTYLLCVKPAVSNIYGYLHGGFVAAAAEFLSIACARTVVGEDKKLFI 123

Query: 174 GELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAK 233
           GELSISYLSGAP NAEV++DAS+LRSG+ L+VV ++F+LQKTGKL+YTARSTLYNMPMAK
Sbjct: 124 GELSISYLSGAPENAEVVVDASVLRSGRSLSVVEVEFKLQKTGKLVYTARSTLYNMPMAK 183

Query: 234 L 235
           L
Sbjct: 184 L 184

[Close]

BLAST of CmaCh14G020180 vs. ExPASy TrEMBL
Match: A0A1S3AVH8 (acyl-coenzyme A thioesterase 13 OS=Cucumis melo OX=3656 GN=LOC103483296 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.3e-72
Identity = 142/181 (78.45%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 54  SSATPSSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDII 113
           SS++ SSSE PSLIF SPTIQIK +SEEDLR TI++ NGL+GSGQIPDDC+TK FYS I 
Sbjct: 4   SSSSSSSSEIPSLIFQSPTIQIKGISEEDLRETIQMFNGLTGSGQIPDDCDTKAFYSHIT 63

Query: 114 RGHLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFL 173
           RGHL Q R ERGRLTYLL VKPAVSN YG+LHGGFVAAAAEF SIACARTV+ EDK+LF+
Sbjct: 64  RGHLRQLRRERGRLTYLLCVKPAVSNIYGYLHGGFVAAAAEFLSIACARTVVGEDKKLFI 123

Query: 174 GELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAK 233
           GELSISYLSGAP NAEV++DAS+LRSG+ L+VV ++F+LQKTGKL+YTARSTLYNMPMAK
Sbjct: 124 GELSISYLSGAPENAEVVVDASVLRSGRSLSVVEVEFKLQKTGKLVYTARSTLYNMPMAK 183

Query: 234 L 235
           L
Sbjct: 184 L 184

[Close]

BLAST of CmaCh14G020180 vs. ExPASy TrEMBL
Match: A0A6J1F1L3 (acyl-coenzyme A thioesterase 13-like OS=Cucurbita moschata OX=3662 GN=LOC111441340 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 8.3e-70
Identity = 138/179 (77.09%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 56  ATPSSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRG 115
           A PSS E  SLI +SP IQIK+MSEEDL  TI++LNGL G  QIPDDCNT+GFYSDI R 
Sbjct: 2   AKPSSPEASSLILESPAIQIKNMSEEDLHKTIQMLNGLRGFVQIPDDCNTEGFYSDISRN 61

Query: 116 HLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGE 175
           HL Q  LERGR+TYLL VKP VSN YGFLHGGFVAAAAEFSSIACARTV+ EDK LFLGE
Sbjct: 62  HLRQLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGE 121

Query: 176 LSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
           LSISYLSGAP+NAEV++DAS+LRSGK L +++I+FRLQKTGKL+YTARSTLY+MPM KL
Sbjct: 122 LSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 180

[Close]

BLAST of CmaCh14G020180 vs. NCBI nr
Match: XP_022979591.1 (uncharacterized protein LOC111479273 [Cucurbita maxima])

HSP 1 Score: 414.8 bits (1065), Expect = 4.8e-112
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MAKPSSSATPSSSATPSSSATPSSSETPSSSATPSSSATPSSSATPSSSETPSSSATPSS 60
           MAKPSSSATPSSSATPSSSATPSSSETPSSSATPSSSATPSSSATPSSSETPSSSATPSS
Sbjct: 1   MAKPSSSATPSSSATPSSSATPSSSETPSSSATPSSSATPSSSATPSSSETPSSSATPSS 60

Query: 61  SETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLWQR 120
           SETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLWQR
Sbjct: 61  SETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLWQR 120

Query: 121 RLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISY 180
           RLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISY
Sbjct: 121 RLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISY 180

Query: 181 LSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
           LSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL
Sbjct: 181 LSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 234

[Close]

BLAST of CmaCh14G020180 vs. NCBI nr
Match: XP_023526383.1 (acyl-coenzyme A thioesterase 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.7 bits (927), Expect = 4.8e-96
Identity = 200/207 (96.62%), Postives = 200/207 (96.62%), Query Frame = 0


Query: 28  PSSSATPSSSATPSSSATPSSSETPSSSATPSSSETPSLIFDSPTIQIKDMSEEDLRGTI 87
           PSSSATPSSS TPSS  TPSSSETPSSS TPSSS TPSLIFDSPTIQIKDMSEEDLRGTI
Sbjct: 4   PSSSATPSSSETPSSE-TPSSSETPSSSETPSSSATPSLIFDSPTIQIKDMSEEDLRGTI 63

Query: 88  ELLNGLSGSGQIPDDCNTKGFYSDIIRGHLWQRRLERGRLTYLLSVKPAVSNRYGFLHGG 147
           ELLNGL GSGQIPDDCNTKGFYSDIIRGHL QRRLERGRLTYLLSVKPAVSNRYGFLHGG
Sbjct: 64  ELLNGLGGSGQIPDDCNTKGFYSDIIRGHLRQRRLERGRLTYLLSVKPAVSNRYGFLHGG 123

Query: 148 FVAAAAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVA 207
           FVAAAAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVA
Sbjct: 124 FVAAAAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVA 183

Query: 208 IDFRLQKTGKLIYTARSTLYNMPMAKL 235
           IDFRLQKTGKLIYTARSTLYNMPMAKL
Sbjct: 184 IDFRLQKTGKLIYTARSTLYNMPMAKL 209

[Close]

BLAST of CmaCh14G020180 vs. NCBI nr
Match: KAG7018981.1 (hypothetical protein SDJN02_20858, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 349.0 bits (894), Expect = 3.2e-92
Identity = 185/191 (96.86%), Postives = 185/191 (96.86%), Query Frame = 0


Query: 44  ATPSSSETPSSSATPSSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDC 103
           A PSSS TPSSSATPSSS TPSLIFDSPTIQIKDMSEEDLRGTIELLNGL GSGQIPDDC
Sbjct: 2   AKPSSSATPSSSATPSSSATPSLIFDSPTIQIKDMSEEDLRGTIELLNGLGGSGQIPDDC 61

Query: 104 NTKGFYSDIIRGHLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACART 163
           NTKGFYSDIIRGHL QRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACART
Sbjct: 62  NTKGFYSDIIRGHLRQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACART 121

Query: 164 VMAEDKELFLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTAR 223
           VMAEDKELFLGELSISYLSGAP NAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTAR
Sbjct: 122 VMAEDKELFLGELSISYLSGAPPNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTAR 181

Query: 224 STLYNMPMAKL 235
           STLYNMPMAKL
Sbjct: 182 STLYNMPMAKL 192

[Close]

BLAST of CmaCh14G020180 vs. NCBI nr
Match: KAG6582597.1 (hypothetical protein SDJN03_22599, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 339.3 bits (869), Expect = 2.6e-89
Identity = 177/183 (96.72%), Postives = 177/183 (96.72%), Query Frame = 0


Query: 52  PSSSATPSSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSD 111
           PSSSATPSSS TPSLIFDSPTIQIKDMSEEDLRGTIELLNGL GSGQIPDDCNTKGFYSD
Sbjct: 4   PSSSATPSSSATPSLIFDSPTIQIKDMSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSD 63

Query: 112 IIRGHLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKEL 171
           IIRGHL QRRLERGRLTYLLSV PAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKEL
Sbjct: 64  IIRGHLRQRRLERGRLTYLLSVNPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKEL 123

Query: 172 FLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPM 231
           FLGELSISYLSGAP NAEVIIDASILRSGKHLNVVA DFRLQKTGKLIYTARSTLYNMPM
Sbjct: 124 FLGELSISYLSGAPPNAEVIIDASILRSGKHLNVVATDFRLQKTGKLIYTARSTLYNMPM 183

Query: 232 AKL 235
           AKL
Sbjct: 184 AKL 186

[Close]

BLAST of CmaCh14G020180 vs. NCBI nr
Match: XP_022924378.1 (acyl-coenzyme A thioesterase 13-like [Cucurbita moschata])

HSP 1 Score: 334.3 bits (856), Expect = 8.2e-88
Identity = 172/179 (96.09%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 56  ATPSSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRG 115
           A PSSS TPSLIFDSPTIQIKD+SEEDLRGTIELLNGL GSGQIPDDCNTKGFYSDIIRG
Sbjct: 2   AKPSSSATPSLIFDSPTIQIKDVSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSDIIRG 61

Query: 116 HLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGE 175
           HL QRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGE
Sbjct: 62  HLRQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGE 121

Query: 176 LSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
           LSISYLSGAP NAEVIIDASILRSGKHLNVVAIDFRLQKTGKL+YTARSTLYNMPMAKL
Sbjct: 122 LSISYLSGAPPNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLVYTARSTLYNMPMAKL 180

[Close]

BLAST of CmaCh14G020180 vs. TAIR 10
Match: AT3G61200.1 (Thioesterase superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 3.1e-24
Identity = 64/187 (34.22%), Postives = 114/187 (60.96%), Query Frame = 0


Query: 48  SSETPSSSATPSSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKG 107
           S E    S+TP SS+T        T   K +    +    +    +S      D  +   
Sbjct: 11  SPEDTDMSSTPISSDT--------TAVSKVIDPNYVLMVADFFKAISPDESCNDFTSFDS 70

Query: 108 FYSDIIRGHLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAE 167
           F S + + +     + RGR++  ++V P +SN +  LHGG VA+ AE  ++AC +TV++E
Sbjct: 71  F-SVLFQNNTRALSIARGRVSCSVTVTPGISNFFKGLHGGAVASIAERVAMACVKTVVSE 130

Query: 168 DKELFLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLY 227
           DK LF+GELS+SYLS AP ++E++++ +++R+G++L+VV ++F++++T K+ Y +R+T Y
Sbjct: 131 DKHLFIGELSMSYLSSAPISSELLVEGTVVRTGRNLSVVTVEFKIKETMKVTYLSRATFY 188

Query: 228 NMPMAKL 235
           + P++KL
Sbjct: 191 HSPISKL 188

[Close]

BLAST of CmaCh14G020180 vs. TAIR 10
Match: AT1G04290.1 (Thioesterase superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 7.3e-10
Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = 0


Query: 122 LERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISYL 181
           +E GR+   + + P + N   FLHGG  A   +    A   T  A    + + E+++SYL
Sbjct: 44  IEPGRIVCSMKIPPHLLNAGKFLHGGATATLVDLIGSAVIYTAGASHSGVSV-EINVSYL 103

Query: 182 SGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
             A  + E+ I++  LR GK + VV+++ R + TGK+I   R T Y  P + L
Sbjct: 104 DAAFLDEEIEIESKALRVGKAVAVVSVELRKKTTGKIIAQGRHTKYFAPRSNL 155

The following BLAST results are available for this feature:

BLAST of CmaCh14G020180 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh14G020180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IR82	2.3e-112	100.00	uncharacterized protein LOC111479273 OS=Cucurbita maxima OX=3661 GN=LOC111479273...	[more]
A0A6J1EC92	4.0e-88	96.09	acyl-coenzyme A thioesterase 13-like OS=Cucurbita moschata OX=3662 GN=LOC1114318...	[more]
A0A5A7U3Z9	2.3e-72	78.45	Acyl-coenzyme A thioesterase 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3AVH8	2.3e-72	78.45	acyl-coenzyme A thioesterase 13 OS=Cucumis melo OX=3656 GN=LOC103483296 PE=3 SV=...	[more]
A0A6J1F1L3	8.3e-70	77.09	acyl-coenzyme A thioesterase 13-like OS=Cucurbita moschata OX=3662 GN=LOC1114413...	[more]

BLAST of CmaCh14G020180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022979591.1	4.8e-112	100.00	uncharacterized protein LOC111479273 [Cucurbita maxima]	[more]
XP_023526383.1	4.8e-96	96.62	acyl-coenzyme A thioesterase 13-like [Cucurbita pepo subsp. pepo]	[more]
KAG7018981.1	3.2e-92	96.86	hypothetical protein SDJN02_20858, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6582597.1	2.6e-89	96.72	hypothetical protein SDJN03_22599, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022924378.1	8.2e-88	96.09	acyl-coenzyme A thioesterase 13-like [Cucurbita moschata]	[more]

BLAST of CmaCh14G020180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61200.1	3.1e-24	34.22	Thioesterase superfamily protein	[more]
AT1G04290.1	7.3e-10	32.74	Thioesterase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.129.10	Hotdog Thioesterase	coord: 103..231 e-value: 9.8E-24 score: 85.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	PANTHER	PTHR21660:SF12	OS07G0462700 PROTEIN	coord: 70..234
None	No IPR available	CDD	cd03443	PaaI_thioesterase	coord: 121..227 e-value: 4.63586E-17 score: 72.2054
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 141..217 e-value: 3.9E-8 score: 33.5
IPR039298	Acyl-coenzyme A thioesterase 13	PANTHER	PTHR21660	THIOESTERASE SUPERFAMILY MEMBER-RELATED	coord: 70..234
IPR029069	HotDog domain superfamily	SUPERFAMILY	54637	Thioesterase/thiol ester dehydrase-isomerase	coord: 120..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G020180.1	CmaCh14G020180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0047617	acyl-CoA hydrolase activity