CmaCh14G019340 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATGCCTCTACATTCGTCACAGTGCCAAAGCCCTTTATCAACGCGGCTAATTCACCTCCGTATCTGCACGGCGACGAGTAATCGGTACGCTGATAAGTAAATCCGTTGATAGACTGTCGCATTTTCTTTTCTCGATCAATTTCTGTCGCGCTATCCGTCTTCTGAATTTCTGGATGTTTTTTCTTCTTGATTTTTGGATAGGAGGACTGCGAAGAAGCGCTTTCAAAGTCCGCGCAGTTTCTAAGAAACGGGAGCCTGCGAAGGTAGTCCTCCCCTGCGATTTGAGTTTTTTTTTTTTTTCTTTCTTTTGTGTTATTGAACTCATGAACTTGATTTTTAATGCTTATTATTGACATTTTATGATGCTTTTGGATTTAAGGTGTTTCCTCAAGCTGATAGAGTATACTCGTCCGTCTTGAGCAGCGCCCTGAGGTAATCTCACGCTCAACAAAAATTGCGAATGAATTTGTAAAATTTGTAGAATTTGTTTGATGTATTATTGTCTATTACCTTCCGAGTTATTATATCCGATATAAATGCTTGTCAGGTAAGTCGTTTGGTTTGGTGGAGTCATCATATTGGCTTGAATATTCTCTCAATTATTTATGGTCCAGCTTTGCTTTTCAATTATTGGGTATCATACCACAAATGTGCTGCAATCAAGAATGCGGATGGATGTTGCTTTTTAACCATATCTTTGATTGTTAAAAGTGGAAAAAAAAAAAAAAAAAAACTTGTTCTCAGAAATCTGATCATAGGTTTAGTATGGATTATAAATTTGTTTGAATTGAGTTTGTCTATGCACCATTCCTCTTAGAATTGGATGTCGAAAAGGTCTTGGCTCAAAAAATCTGGTCATAGGGTTGGTTGGTTTACATTATAAGTCTTACATCAATCACCGTATGGGACTGTTACTAGAGATGCTTTTGTAGGAAATATGAATGGTTTGGCGATGCATCCTTGGAAGTCTTAGCTTCTAAGTTGTATCTTGCGTGTTAGCTGACCCTCTTATTCATGTCATAAAGTCTATTCATGTTCATCTTTCTGCTTTCCCTACACATTATTTTTCCTTCTGCTTCTCTCCATTTCGGATTTCGAAATGAAAGCAATGAGCTATACTCGGGGACCAAGATGCAGCCGTAGTAGCCTCTTAGTCGTACTTTAGTTAGTTCAAACTCTTACAAACTAAAGTTAGAACTTTCTTATATTTGTTGTTAATATGGCAAACAAATGCGAATGAACTATATTTGAATGAGTGTAATTATTATTTTATCTATTGAGCTATATTCAATCAACGAACACTAACACATTATTTTTTTAAGATTGATTTTGAATGTTGGTGGTGGTTTGTCAGGTGGATTTGGGCACAGATTCTAAGCACTGTTTCTGCAAAGCTGGTGATTTGTTAGCTGTGGTTGAGTAGAGAAGCTTCCTCCAACACTACAATCAGATCAACATCAGATATTTTCACTCAGATTAGTTCTCTTCCCTGATTCTCATTTGCTTGTTGCTTCTGCAATATCTGATCTTTGTTTTTGTCTTTATTGCTTTGTGTGATCCGTATAAAGATATCAGTTCTTCTCATTAGGAAGAATACCTTACCTTAAATTATATTTTAAAAATTACTCAACCTTCAAAACAAAACTGAAGAAAAACAAGAATAAATGATTTTTTTTAATACTTTTTCCCCCTAGAGAATGTAAAACCCTTTTCAAATAAATGATTTTT ATGGCGATGCCTCTACATTCGTCACAGTGCCAAAGCCCTTTATCAACGCGGCTAATTCACCTCCGTATCTGCACGGCGACGAGAGGACTGCGAAGAAGCGCTTTCAAAGTCCGCGCAGTTTCTAAGAAACGGGAGCCTGCGAAGAGTATACTCGTCCGTCTTGAGCAGCGCCCTGAGAATTTGTTTGATGTATTATTGTCTATTACCTTCCGAGTTATTATATCCGATATAAATGCTTGTCAGGTGGATTTGGGCACAGATTCTAAGCACTGTTTCTGCAAAGCTGGTGATTTGTTAGCTGTGGTTGAGTAGAGAAGCTTCCTCCAACACTACAATCAGATCAACATCAGATATTTTCACTCAGATTAGTTCTCTTCCCTGATTCTCATTTGCTTGTTGCTTCTGCAATATCTGATCTTTGTTTTTGTCTTTATTGCTTTGTGTGATCCGTATAAAGATATCAGTTCTTCTCATTAGGAAGAATACCTTACCTTAAATTATATTTTAAAAATTACTCAACCTTCAAAACAAAACTGAAGAAAAACAAGAATAAATGATTTTTTTTAATACTTTTTCCCCCTAGAGAATGTAAAACCCTTTTCAAATAAATGATTTTT ATGGCGATGCCTCTACATTCGTCACAGTGCCAAAGCCCTTTATCAACGCGGCTAATTCACCTCCGTATCTGCACGGCGACGAGAGGACTGCGAAGAAGCGCTTTCAAAGTCCGCGCAGTTTCTAAGAAACGGGAGCCTGCGAAGAGTATACTCGTCCGTCTTGAGCAGCGCCCTGAGAATTTGTTTGATGTATTATTGTCTATTACCTTCCGAGTTATTATATCCGATATAAATGCTTGTCAGGTGGATTTGGGCACAGATTCTAAGCACTGTTTCTGCAAAGCTGGTGATTTGTTAGCTGTGGTTGAGTAG MAMPLHSSQCQSPLSTRLIHLRICTATRGLRRSAFKVRAVSKKREPAKSILVRLEQRPENLFDVLLSITFRVIISDINACQVDLGTDSKHCFCKAGDLLAVVE Homology
BLAST of CmaCh14G019340 vs. ExPASy Swiss-Prot
Match: Q9M1C2 (10 kDa chaperonin 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN10-1 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.7e-08 Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 0
BLAST of CmaCh14G019340 vs. ExPASy Swiss-Prot
Match: O80504 (10 kDa chaperonin 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN10-2 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.7e-08 Identity = 41/108 (37.96%), Postives = 57/108 (52.78%), Query Frame = 0
BLAST of CmaCh14G019340 vs. ExPASy TrEMBL
Match: A0A0A0L6L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128890 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 7.8e-12 Identity = 52/111 (46.85%), Postives = 63/111 (56.76%), Query Frame = 0
BLAST of CmaCh14G019340 vs. ExPASy TrEMBL
Match: A0A6J1ICA1 (10 kDa chaperonin 1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473490 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 6.6e-11 Identity = 52/111 (46.85%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of CmaCh14G019340 vs. ExPASy TrEMBL
Match: A0A5D3CZW2 (10 kDa chaperonin isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003170 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 6.6e-11 Identity = 50/109 (45.87%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of CmaCh14G019340 vs. ExPASy TrEMBL
Match: A0A6J1FCS3 (10 kDa chaperonin 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442821 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 6.6e-11 Identity = 52/111 (46.85%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of CmaCh14G019340 vs. ExPASy TrEMBL
Match: A0A1S3AWL8 (10 kDa chaperonin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483436 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 6.6e-11 Identity = 50/109 (45.87%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of CmaCh14G019340 vs. NCBI nr
Match: XP_004133964.1 (10 kDa chaperonin 1, chloroplastic [Cucumis sativus] >KGN56679.1 hypothetical protein Csa_010283 [Cucumis sativus]) HSP 1 Score: 79.7 bits (195), Expect = 1.6e-11 Identity = 52/111 (46.85%), Postives = 63/111 (56.76%), Query Frame = 0
BLAST of CmaCh14G019340 vs. NCBI nr
Match: KAG7028719.1 (10 kDa chaperonin 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 79.7 bits (195), Expect = 1.6e-11 Identity = 53/114 (46.49%), Postives = 63/114 (55.26%), Query Frame = 0
BLAST of CmaCh14G019340 vs. NCBI nr
Match: KAG7946052.1 (hypothetical protein I3843_14G018600 [Carya illinoinensis]) HSP 1 Score: 77.0 bits (188), Expect = 1.0e-10 Identity = 48/107 (44.86%), Postives = 61/107 (57.01%), Query Frame = 0
BLAST of CmaCh14G019340 vs. NCBI nr
Match: KAG6677307.1 (hypothetical protein I3842_14G019300 [Carya illinoinensis]) HSP 1 Score: 77.0 bits (188), Expect = 1.0e-10 Identity = 48/107 (44.86%), Postives = 61/107 (57.01%), Query Frame = 0
BLAST of CmaCh14G019340 vs. NCBI nr
Match: XP_038880425.1 (10 kDa chaperonin 1, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 77.0 bits (188), Expect = 1.0e-10 Identity = 50/109 (45.87%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of CmaCh14G019340 vs. TAIR 10
Match: AT2G44650.1 (chloroplast chaperonin 10 ) HSP 1 Score: 60.1 bits (144), Expect = 1.2e-09 Identity = 41/108 (37.96%), Postives = 57/108 (52.78%), Query Frame = 0
BLAST of CmaCh14G019340 vs. TAIR 10
Match: AT3G60210.1 (GroES-like family protein ) HSP 1 Score: 60.1 bits (144), Expect = 1.2e-09 Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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