CmaCh14G018800 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh14G018800
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr14: 13315632 .. 13316557 (+)
RNA-Seq ExpressionCmaCh14G018800
SyntenyCmaCh14G018800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACTTTCCATTTTGGACAATCTGTGTTCTTCCGACTTCGTTTTACCCTCCGCTGTGTTCTTATCTCTTAATCTTTCAGTTCGCGAAGGTAAAAATTATCGAGAGATAAAACCCTTGGATTTCAATTTCTTTCGCTTTCTATTATGCATTTGATTTCATTTGATTTTTGAACGCGTTGTTCTCTTTGACAAAACCTCCCCAAATCCGCTATGTTCTTGTAGATCTCGCTGTTTCAATTTTTCTTTGTCTGCCTACCAACCGCTTGCGCGACCCTTTTTTTGTTTGTTGATCGTCTTTTTGATACAAACATTGCTTGGATGGTGGGGTTTTCCTGCTTTTTCCTGTGTTCCTTTCTTGATTCCTTTACATATTTTTATCCATTTCTTTACAGATTCGGTTGCTTTTGATTGTTTTTCTTTTCTTTTTTTTTTCCCCCCTCCAATTTATAATTCGTGCTTCACGCACCCACATGCATGTTTTTGGGTTTGTCTGATCTGGATTGGATCACAAGGGTCTTATGTTCTTTTTCTACTTGTAGAGAGAGAATGAGAGGAGAGAGGGAAAGAGAGGGTGGGGTTTTGGCTCTCTTTCTGCAATCTTGGTCTCTTTGAGGGGTCATGGAAGAAGCACACAGGAGGAGGAGGAGAAGGTGAGATTTCTTGAATTGAAGGATATTGCCACTGGCCCATTTGATAAACCTTTCTTCTTTGTTTGATATTGGCGTCAACGTTTTCTATTGGGCTGTCGGTTTTCTTCTCGTGACGGTCTGGTGTAGTCAATTGTGGCTGCTGGAACTTCGGAAAGGGTTCAAGTAATTCTTCTTTTTGTTGGATAATTATGATCTGGTGGTTATTTTTCATAGTTGAATCTGCTTCTCCTTAATCATTATGTCCTTGCTCGTGTGCTCCCCTGTGCTTCTTGA

mRNA sequence

ATGGCGACTTTCCATTTTGGACAATCTGTGTTCTTCCGACTTCGTTTTACCCTCCGCTGTTTCGCGAAGAGAGAGAATGAGAGGAGAGAGGGAAAGAGAGGGTGGGGTTTTGGCTCTCTTTCTGCAATCTTGGTCTCTTTGAGGGGTCATGGAAGAAGCACACAGGAGGAGGAGGAGAAGTTGAATCTGCTTCTCCTTAATCATTATGTCCTTGCTCGTGTGCTCCCCTGTGCTTCTTGA

Coding sequence (CDS)

ATGGCGACTTTCCATTTTGGACAATCTGTGTTCTTCCGACTTCGTTTTACCCTCCGCTGTTTCGCGAAGAGAGAGAATGAGAGGAGAGAGGGAAAGAGAGGGTGGGGTTTTGGCTCTCTTTCTGCAATCTTGGTCTCTTTGAGGGGTCATGGAAGAAGCACACAGGAGGAGGAGGAGAAGTTGAATCTGCTTCTCCTTAATCATTATGTCCTTGCTCGTGTGCTCCCCTGTGCTTCTTGA

Protein sequence

MATFHFGQSVFFRLRFTLRCFAKRENERREGKRGWGFGSLSAILVSLRGHGRSTQEEEEKLNLLLLNHYVLARVLPCAS
Homology
[Close]
BLAST of CmaCh14G018800 vs. NCBI nr
Match: KAG7018847.1 (hypothetical protein SDJN02_20720, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 94.4 bits (233), Expect = 4.8e-16
Identity = 46/66 (69.70%), Postives = 50/66 (75.76%), Query Frame = 0 

Query: 1  MATFHFGQSVFFRLRFTLRCFAKRENERREGKRGWGFGSLSAILVSLRGHGRSTQEEEEK 60
          MATFHFGQSVFFRLRFTLRC  ++E   RE +RGWGFG  S  L   RGHGRSTQEEEEK
Sbjct: 17 MATFHFGQSVFFRLRFTLRCCREKERRERERERGWGFGPFSCNLGLSRGHGRSTQEEEEK 76

Query: 61 LNLLLL 67
          +  L L
Sbjct: 77 VRFLEL 82

The following BLAST results are available for this feature:
BLAST of CmaCh14G018800 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh14G018800 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh14G018800 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7018847.14.8e-1669.70hypothetical protein SDJN02_20720, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmaCh14G018800 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G018800.1CmaCh14G018800.1mRNA