CmaCh14G018040 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G018040
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	CASP-like protein
Location	Cma_Chr14: 12963420 .. 12964909 (+)
RNA-Seq Expression	CmaCh14G018040
Synteny	CmaCh14G018040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTCCATCAGCTTTCTGCAAAACCACTTTCGAGTCCCGGTAATCCCTCATCAAGTTCTCTGTAATTTCGAAATCGATTCAACTCCTCGATCTCGTTCTGTGTAATTCTTTTGCCGCAACTTTTGGGGGTTTTGGGTACTCTGATTTTCTCGATTGCTATCTGGTGGAAGGGCGTTCTTGAGTTTCTTGGATGGTTGCTAAAGTGTTTAGAGAGTTATGAGAAGATGGGTGATTCAGTGGATCGGATTTTGAGAATTGGAGGTTTCTGCTGAATTTGGGAAAGAAGAAGATGAGGGATTTTCCAGGGAGTCCTGGGACTATGACGGGGCTAATTCTGAGGATTTTGCAGTTCGTTTTTGCTGCTGTCTCTATTGCTTCTATGGCTTCGACTGCTTACTTCTTCAAATTCACAGCTTTTTGGTTTGTGTTCTTTGCTCCCTTTTTAGTTCCTCTGTTTCACTTGAATACAATCTGATGATTCTCCATGCATCTAATATAATCAACCCATGAAACTACGGTCAATCTTGAGCCATCCCCTGTGATGAAGCAAACTGGTTGTTTATTATTTGCACCACAAGCTGTTTAAAAGGCTCAAACTGTAGCAATTTCATATCATATAGATGTTTCATTGTACCTTTCCTTGCCATAAGTACTGAAAATGACTATCTTTCGACAATTTGGATGATCAAAGTTCAAGATTTGTGCTTCCGGTTGATTGCTGACAATGACCAAAAGTATCCATCTGCATAGCATTGAAAATCAGTCTACAAAAATGGAGAAGAAAACATGTGCAGTTCTCTAATTGGATATTCTTGTAGATTACCTATTTTCTCCCACCATAGCCATGAGACCAGTCCATCTTGTTGCAATATTCTCTGTGATATGAATCCCAAAACACATAGGATTTCACATAAAGAATACTTCTTGTTCGATGTTTGTGCAGCTACCTGATAGCTTCATTGGGGTTGCAAATCACCTGGAGTTTTGTGCTAGCATTAATCGATGCCTATGCACTGGTAAAAAACAGAGCCCTCAAGAACTCTCTGCTCATTAGCCTCTTCGTCGTCGGTGATTGGGTAAGTCTCCATTAAACTTGTTCACAGACTTTTTTATGCACAACTCTAAGTTCACGTATTATGTTGCAGATTACAGCAACATTGACACTCGCAGCAGCCTCTTCTTCTAGTGGGGTAGCAATACTGTATTTCAACGACTTGAACATTTGTGGTTTTATTGGGGAATGCCAAAAATACCAACTCTCTGTCGCCTTTGCATTCCTCAGCTGGATAACTGTTGCCACTTCTTCTCTTATCATGGTCTGGCTATTGGCTTCCGGTTAAACCGTTTGTTGTACACGCAATTTCAAATGTTGCACAGTTTTTATTTCATCGATTCCAATTTCGAACTATCAAATCCTACTGATTTGATCCATTTTAATCTTCTTCTTTAACATTTAAGTTTTTCCCCTTCATGAGATAAAATCTCG

mRNA sequence

ATGAATGTCCATCAGCTTTCTGCAAAACCACTTTCGAGTCCCGGTAATCCCTCATCAAGTTCTCTCTACCTGATAGCTTCATTGGGGTTGCAAATCACCTGGAGTTTTGTGCTAGCATTAATCGATGCCTATGCACTGGTAAAAAACAGAGCCCTCAAGAACTCTCTGCTCATTAGCCTCTTCGTCGTCGGTGATTGGATTACAGCAACATTGACACTCGCAGCAGCCTCTTCTTCTAGTGGGGTAGCAATACTGTATTTCAACGACTTGAACATTTGTGGTTTTATTGGGGAATGCCAAAAATACCAACTCTCTGTCGCCTTTGCATTCCTCAGCTGGATAACTGTTGCCACTTCTTCTCTTATCATGGTCTGGCTATTGGCTTCCGGTTAAACCGTTTGTTGTACACGCAATTTCAAATGTTGCACAGTTTTTATTTCATCGATTCCAATTTCGAACTATCAAATCCTACTGATTTGATCCATTTTAATCTTCTTCTTTAACATTTAAGTTTTTCCCCTTCATGAGATAAAATCTCG

Coding sequence (CDS)

ATGAATGTCCATCAGCTTTCTGCAAAACCACTTTCGAGTCCCGGTAATCCCTCATCAAGTTCTCTCTACCTGATAGCTTCATTGGGGTTGCAAATCACCTGGAGTTTTGTGCTAGCATTAATCGATGCCTATGCACTGGTAAAAAACAGAGCCCTCAAGAACTCTCTGCTCATTAGCCTCTTCGTCGTCGGTGATTGGATTACAGCAACATTGACACTCGCAGCAGCCTCTTCTTCTAGTGGGGTAGCAATACTGTATTTCAACGACTTGAACATTTGTGGTTTTATTGGGGAATGCCAAAAATACCAACTCTCTGTCGCCTTTGCATTCCTCAGCTGGATAACTGTTGCCACTTCTTCTCTTATCATGGTCTGGCTATTGGCTTCCGGTTAA

Protein sequence

MNVHQLSAKPLSSPGNPSSSSLYLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLASG

Homology

[Close]

BLAST of CmaCh14G018040 vs. ExPASy Swiss-Prot
Match: Q8L7R5 (CASP-like protein 5B3 OS=Arabidopsis thaliana OX=3702 GN=At3g23200 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-31
Identity = 67/107 (62.62%), Postives = 86/107 (80.37%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIA++GLQ+ WSF LA++D +ALV+ + L + +L+SLFVVGDW+T+TL+LA ASSS+G+
Sbjct: 45  YLIAAMGLQVIWSFGLAILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGI 104

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
            +LYF DL  C F  EC KYQLSVA AFL WIT+A SSL  +WLLAS
Sbjct: 105 TVLYFGDLGSCSFEAECWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of CmaCh14G018040 vs. ExPASy Swiss-Prot
Match: P0DI71 (CASP-like protein 5B1 OS=Ginkgo biloba OX=3311 GN=gba_locus_13664 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-28
Identity = 63/107 (58.88%), Postives = 84/107 (78.50%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YL+A++ LQ  WSF+LA++D YAL+  R L+NS+L+SLFVVGDW+TATL+LAAA S++GV
Sbjct: 72  YLVAAMSLQFLWSFMLAILDTYALLIKRGLRNSVLLSLFVVGDWVTATLSLAAACSTAGV 131

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
            +L+ NDLN CG +  C +YQLS A AFLSW+ +  SSL+  WL AS
Sbjct: 132 TVLFDNDLNYCGQM-HCHRYQLSAAMAFLSWLLIGMSSLLTFWLWAS 177

[Close]

BLAST of CmaCh14G018040 vs. ExPASy Swiss-Prot
Match: D5ACW4 (CASP-like protein 5B1 (Fragment) OS=Picea sitchensis OX=3332 PE=2 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-25
Identity = 61/107 (57.01%), Postives = 79/107 (73.83%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YL A++ LQ  WSFVLA ID YAL+  R L NS+L+SLFVVGDW+TATL+LAAA S++G+
Sbjct: 76  YLAAAMALQFLWSFVLATIDVYALLIKRGLPNSILLSLFVVGDWVTATLSLAAACSTAGI 135

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
            +L+  DLN C  +  C++YQLS   AF SW+ +A SSLI + LL S
Sbjct: 136 TVLFDKDLNYCDQM-HCRRYQLSATMAFFSWVLIAISSLITLLLLVS 181

[Close]

BLAST of CmaCh14G018040 vs. ExPASy Swiss-Prot
Match: B6TAX2 (CASP-like protein 5B2 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.2e-24
Identity = 61/109 (55.96%), Postives = 81/109 (74.31%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIAS+GLQ+ WSF LA +D YA+  N+ L + +L+SLFVVGDW+TA L+ AA+SS++GV
Sbjct: 45  YLIASMGLQMLWSFGLACLDGYAIRANKDLTSPILLSLFVVGDWVTAILSFAASSSAAGV 104

Query: 83  AILYFNDLNICGFIGE--CQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
            IL+  D+  C    +  C KY+L+ AFAFLSW   ATS+LIM WLLA+
Sbjct: 105 VILFQKDVLFCRRYPQLPCGKYELATAFAFLSWALSATSALIMFWLLAA 153

[Close]

BLAST of CmaCh14G018040 vs. ExPASy Swiss-Prot
Match: B8BD96 (CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.8e-24
Identity = 59/109 (54.13%), Postives = 80/109 (73.39%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIAS+GLQ+ WSF LA +D Y+L   R L N +L+SLFVVGDW+TA L+ AAAS+S+GV
Sbjct: 45  YLIASMGLQLLWSFGLACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGV 104

Query: 83  AILYFNDLNICGFIGE--CQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
            IL+  D++ C    +  C +Y+LSV  AF++W  +ATS++ M WLLAS
Sbjct: 105 TILFERDVHFCRMYPQLSCGRYELSVILAFITWSFIATSAVSMFWLLAS 153

[Close]

BLAST of CmaCh14G018040 vs. ExPASy TrEMBL
Match: A0A6J1IQ47 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479011 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.9e-49
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV
Sbjct: 45  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 104

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLASG 131
           AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLASG
Sbjct: 105 AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLASG 152

[Close]

BLAST of CmaCh14G018040 vs. ExPASy TrEMBL
Match: A0A6J1E906 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111431763 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.7e-46
Identity = 103/107 (96.26%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIASLGLQITWSFVLALIDAYALVKN+AL+NSLLISLFVVGDWITATLTLAAASSSSGV
Sbjct: 69  YLIASLGLQITWSFVLALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGV 128

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
           AILYFNDL+ICGFIGECQKYQLSVA AFLSWITVATSSLIMVWLLAS
Sbjct: 129 AILYFNDLDICGFIGECQKYQLSVALAFLSWITVATSSLIMVWLLAS 175

[Close]

BLAST of CmaCh14G018040 vs. ExPASy TrEMBL
Match: A0A1S3AXA2 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483607 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.8e-42
Identity = 94/107 (87.85%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIASLGLQITWSFVLALIDAYALV+N+AL++++L+SLFVVGDWITATLTLAAASSSSGV
Sbjct: 45  YLIASLGLQITWSFVLALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGV 104

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
           AILYFNDL  C FIGECQKYQLSVA AFLSWIT+ATSSLIMVW+LAS
Sbjct: 105 AILYFNDLKSCNFIGECQKYQLSVALAFLSWITIATSSLIMVWILAS 151

[Close]

BLAST of CmaCh14G018040 vs. ExPASy TrEMBL
Match: A0A0A0L4F6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G135670 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.1e-42
Identity = 93/107 (86.92%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIASLGLQITWSF+LALIDAYALV+N+AL++++L+SLFVVGDWITATLTLAAASSSSGV
Sbjct: 45  YLIASLGLQITWSFMLALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGV 104

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
           AILYFNDL  C FIGECQKYQLSVA AFLSWIT+ATSSLIMVW+LAS
Sbjct: 105 AILYFNDLKSCNFIGECQKYQLSVALAFLSWITIATSSLIMVWILAS 151

[Close]

BLAST of CmaCh14G018040 vs. ExPASy TrEMBL
Match: A0A5D3D223 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001480 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 7.0e-42
Identity = 93/107 (86.92%), Postives = 102/107 (95.33%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIASLGLQITWSFVLALIDAYALV+N+AL++++L+SLFVVGDWITATLTLAAASSSSGV
Sbjct: 45  YLIASLGLQITWSFVLALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGV 104

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
           AILYFNDL  C FIGECQKYQLSVA AFLSWI +ATSSLIMVW+LAS
Sbjct: 105 AILYFNDLKSCNFIGECQKYQLSVALAFLSWIAIATSSLIMVWILAS 151

[Close]

BLAST of CmaCh14G018040 vs. NCBI nr
Match: XP_022979206.1 (CASP-like protein 5B3 [Cucurbita maxima])

HSP 1 Score: 203.4 bits (516), Expect = 1.2e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV
Sbjct: 45  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 104

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLASG 131
           AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLASG
Sbjct: 105 AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLASG 152

[Close]

BLAST of CmaCh14G018040 vs. NCBI nr
Match: XP_023526740.1 (CASP-like protein 5B3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.0 bits (502), Expect = 5.1e-47
Identity = 105/107 (98.13%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIASLGLQITWSFVLALIDAYALVKN+AL+NSLLISLFVVGDWITATLTLAAASSSSGV
Sbjct: 45  YLIASLGLQITWSFVLALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGV 104

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
           AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS
Sbjct: 105 AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 151

[Close]

BLAST of CmaCh14G018040 vs. NCBI nr
Match: KAG7018786.1 (CASP-like protein 5B3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194.9 bits (494), Expect = 4.3e-46
Identity = 102/107 (95.33%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIASLGLQITWSFVLA+IDAYAL+KN+AL+NSLLISLFVVGDWITATLTLAAASSSSGV
Sbjct: 69  YLIASLGLQITWSFVLAIIDAYALIKNKALQNSLLISLFVVGDWITATLTLAAASSSSGV 128

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
           AILYFNDL+ICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS
Sbjct: 129 AILYFNDLDICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 175

[Close]

BLAST of CmaCh14G018040 vs. NCBI nr
Match: XP_022924236.1 (CASP-like protein 5B3 [Cucurbita moschata])

HSP 1 Score: 193.7 bits (491), Expect = 9.6e-46
Identity = 103/107 (96.26%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIASLGLQITWSFVLALIDAYALVKN+AL+NSLLISLFVVGDWITATLTLAAASSSSGV
Sbjct: 69  YLIASLGLQITWSFVLALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGV 128

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
           AILYFNDL+ICGFIGECQKYQLSVA AFLSWITVATSSLIMVWLLAS
Sbjct: 129 AILYFNDLDICGFIGECQKYQLSVALAFLSWITVATSSLIMVWLLAS 175

[Close]

BLAST of CmaCh14G018040 vs. NCBI nr
Match: XP_008438541.1 (PREDICTED: CASP-like protein 5B3 [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 3.8e-42
Identity = 94/107 (87.85%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIASLGLQITWSFVLALIDAYALV+N+AL++++L+SLFVVGDWITATLTLAAASSSSGV
Sbjct: 45  YLIASLGLQITWSFVLALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGV 104

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
           AILYFNDL  C FIGECQKYQLSVA AFLSWIT+ATSSLIMVW+LAS
Sbjct: 105 AILYFNDLKSCNFIGECQKYQLSVALAFLSWITIATSSLIMVWILAS 151

[Close]

BLAST of CmaCh14G018040 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 137.5 bits (345), Expect = 7.6e-33
Identity = 67/107 (62.62%), Postives = 86/107 (80.37%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIA++GLQ+ WSF LA++D +ALV+ + L + +L+SLFVVGDW+T+TL+LA ASSS+G+
Sbjct: 45  YLIAAMGLQVIWSFGLAILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGI 104

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
            +LYF DL  C F  EC KYQLSVA AFL WIT+A SSL  +WLLAS
Sbjct: 105 TVLYFGDLGSCSFEAECWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of CmaCh14G018040 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 111.7 bits (278), Expect = 4.5e-25
Identity = 57/109 (52.29%), Postives = 80/109 (73.39%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YLIAS+GLQ+ WSF LA +D YAL   + L+N +L+SLFVVGDW+TA L+LAAA SS+GV
Sbjct: 45  YLIASMGLQLLWSFGLACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGV 104

Query: 83  AILYFNDLNICGFIGE--CQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
            +LY  D+  C    +  C +Y+++VA +F++WI +A SS +  W+LAS
Sbjct: 105 VVLYEKDIKYCNTQSQYPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

[Close]

BLAST of CmaCh14G018040 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20
Identity = 50/107 (46.73%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           YL+A+ GLQ  WS  LA++D YA++  R+L+N  L+SLF +GD +T+TLT AAA +S+G+
Sbjct: 73  YLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGI 132

Query: 83  AILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
            +L  NDLN C     C +++ S A AF+SW     S L   W LAS
Sbjct: 133 TVLIDNDLNSCA-QNHCVQFETSTALAFISWFAALPSFLFNFWSLAS 178

[Close]

BLAST of CmaCh14G018040 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 95.5 bits (236), Expect = 3.3e-20
Identity = 49/107 (45.79%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 23  YLIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGV 82
           +L+AS+GLQ+ WSF LA +D YA+ +   L++ +L+SLF VGDW+TA L LAAA SS+GV
Sbjct: 45  FLVASMGLQLIWSFGLACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGV 104

Query: 83  AILYFNDLNICGF--IGECQKYQLSVAFAFLSWITVATSSLIMVWLL 128
            +L+  D   C       C ++Q+SV  +F +W   A SS  M W+L
Sbjct: 105 TVLFTKDTEFCRQQPALSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

[Close]

BLAST of CmaCh14G018040 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-17
Identity = 44/106 (41.51%), Postives = 70/106 (66.04%), Query Frame = 0


Query: 24  LIASLGLQITWSFVLALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGVA 83
           L+ ++ LQ  WS  L +IDAYAL+  R+L+N  ++  F +GD +T+TLT AAAS+S+G+ 
Sbjct: 76  LVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTSTLTFAAASASAGIT 135

Query: 84  ILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLAS 130
           +L  NDL  C  +  C +++ + A AF+SW  V+ S ++  W LA+
Sbjct: 136 VL-INDLGQCN-VNHCTRFETATAMAFISWFAVSPSFILNFWSLAT 179

The following BLAST results are available for this feature:

BLAST of CmaCh14G018040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7R5	1.1e-31	62.62	CASP-like protein 5B3 OS=Arabidopsis thaliana OX=3702 GN=At3g23200 PE=2 SV=1	[more]
P0DI71	1.9e-28	58.88	CASP-like protein 5B1 OS=Ginkgo biloba OX=3311 GN=gba_locus_13664 PE=3 SV=1	[more]
D5ACW4	2.6e-25	57.01	CASP-like protein 5B1 (Fragment) OS=Picea sitchensis OX=3332 PE=2 SV=2	[more]
B6TAX2	2.2e-24	55.96	CASP-like protein 5B2 OS=Zea mays OX=4577 PE=2 SV=1	[more]
B8BD96	4.8e-24	54.13	CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 S...	[more]

BLAST of CmaCh14G018040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IQ47	5.9e-49	100.00	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479011 PE=3 SV=1	[more]
A0A6J1E906	4.7e-46	96.26	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111431763 PE=3 SV=1	[more]
A0A1S3AXA2	1.8e-42	87.85	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483607 PE=3 SV=1	[more]
A0A0A0L4F6	4.1e-42	86.92	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G135670 PE=3 SV=1	[more]
A0A5D3D223	7.0e-42	86.92	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00...	[more]

BLAST of CmaCh14G018040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022979206.1	1.2e-48	100.00	CASP-like protein 5B3 [Cucurbita maxima]	[more]
XP_023526740.1	5.1e-47	98.13	CASP-like protein 5B3 [Cucurbita pepo subsp. pepo]	[more]
KAG7018786.1	4.3e-46	95.33	CASP-like protein 5B3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022924236.1	9.6e-46	96.26	CASP-like protein 5B3 [Cucurbita moschata]	[more]
XP_008438541.1	3.8e-42	87.85	PREDICTED: CASP-like protein 5B3 [Cucumis melo]	[more]

BLAST of CmaCh14G018040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23200.1	7.6e-33	62.62	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	4.5e-25	52.29	Uncharacterised protein family (UPF0497)	[more]
AT2G28370.1	1.1e-20	46.73	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	3.3e-20	45.79	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	3.4e-17	41.51	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 22..114 e-value: 6.7E-15 score: 55.2
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 20..128
None	No IPR available	PANTHER	PTHR32021:SF5	CASP-LIKE PROTEIN 5B3	coord: 20..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G018040.1	CmaCh14G018040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane