Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAGAAGAAAAAATGGTGATCTAATAGAGCCAAGGCCATGCCATGAATATACAATGCCAGATGCCAAAAAAGTTGATACTAAAGATAAAGAACCTGCGACCGAATTGATACGTCATAATTCTTCGTGTTTACCAACAGAAGAATCTATGCAAGTTCCTGAGAGTGAAGACAGATTCACGGATCCCAATTAAGAGAAAACATTTGGGACCTGAAACAGTCGTTGAAGACAATATTGCAACTCAATTTAAGATTTAAATGCGATCCAAGTGGAATTTAACACGATTGGATCACACTCCAGGAACAATGCAGAAGAAATTGAAATTTCTCCTGGGTTTGTAGCCAAGAACAAGAACCAGAACGAGGCTCCTGGAGAGGATTGCGAGGATCCAGATGGAGAATATTTGGAAATTTCTGAACAAGGTATGGACACTTCATATTTATCTATTGGAGATTGCAAGCATAAGAACGTGGAGATGGGAAAGACGACGGGAATTTCAACAAACAATGGACATGAAGCGGAACGACAAGAACCAGATGAAAGCCTATTTGAATCACCAGTTCCATTCCCCACATTCGGAGGAGAAAATCAAGAATCACCACGAAGAACGAGCAAGGAATGA
mRNA sequence
ATGTGGAGAAGAAAAAATGGTGATCTAATAGAGCCAAGGCCATGCCATGAATATACAATGCCAGATGCCAAAAAAGTTGATACTAAAGATAAAGAACCTGCGACCGAATTGATACGTCATAATTCTTCGTGTTTACCAACAGAAGAATCTATGCAAGTTCCTGAGAATTTAAATGCGATCCAAGTGGAATTTAACACGATTGGATCACACTCCAGGAACAATGCAGAAGAAATTGAAATTTCTCCTGGGTTTGTAGCCAAGAACAAGAACCAGAACGAGGCTCCTGGAGAGGATTGCGAGGATCCAGATGGAGAATATTTGGAAATTTCTGAACAAGGTATGGACACTTCATATTTATCTATTGGAGATTGCAAGCATAAGAACGTGGAGATGGGAAAGACGACGGGAATTTCAACAAACAATGGACATGAAGCGGAACGACAAGAACCAGATGAAAGCCTATTTGAATCACCAGTTCCATTCCCCACATTCGGAGGAGAAAATCAAGAATCACCACGAAGAACGAGCAAGGAATGA
Coding sequence (CDS)
ATGTGGAGAAGAAAAAATGGTGATCTAATAGAGCCAAGGCCATGCCATGAATATACAATGCCAGATGCCAAAAAAGTTGATACTAAAGATAAAGAACCTGCGACCGAATTGATACGTCATAATTCTTCGTGTTTACCAACAGAAGAATCTATGCAAGTTCCTGAGAATTTAAATGCGATCCAAGTGGAATTTAACACGATTGGATCACACTCCAGGAACAATGCAGAAGAAATTGAAATTTCTCCTGGGTTTGTAGCCAAGAACAAGAACCAGAACGAGGCTCCTGGAGAGGATTGCGAGGATCCAGATGGAGAATATTTGGAAATTTCTGAACAAGGTATGGACACTTCATATTTATCTATTGGAGATTGCAAGCATAAGAACGTGGAGATGGGAAAGACGACGGGAATTTCAACAAACAATGGACATGAAGCGGAACGACAAGAACCAGATGAAAGCCTATTTGAATCACCAGTTCCATTCCCCACATTCGGAGGAGAAAATCAAGAATCACCACGAAGAACGAGCAAGGAATGA
Protein sequence
MWRRKNGDLIEPRPCHEYTMPDAKKVDTKDKEPATELIRHNSSCLPTEESMQVPENLNAIQVEFNTIGSHSRNNAEEIEISPGFVAKNKNQNEAPGEDCEDPDGEYLEISEQGMDTSYLSIGDCKHKNVEMGKTTGISTNNGHEAERQEPDESLFESPVPFPTFGGENQESPRRTSKE
Homology
BLAST of CmaCh14G017580 vs. ExPASy TrEMBL
Match:
A0A0A0L8I8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G144220 PE=4 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 1.3e-43
Identity = 109/210 (51.90%), Postives = 128/210 (60.95%), Query Frame = 0
Query: 4 RKNGDLIEPRPCHEYTMPDAKKVDTKDKEPATELIRHNSSCLPTEE---------SMQVP 63
+K GDL+EPR CH YT+P AK VDTKDK T+L HN+SC EE S+Q+P
Sbjct: 383 KKKGDLVEPRQCHGYTVPAAKNVDTKDKGTVTDLTCHNTSCSLAEECLVIESPNSSVQIP 442
Query: 64 E---------------------NL-------NAIQVEFNTIGSHSRNNAEEIEISPGFVA 123
E N+ N ++ EFNT SHS NNAEE E+SP FV
Sbjct: 443 EVENKEEFQLREHLGTETVDEDNIPTQSKISNEVEEEFNTTESHSENNAEEAEVSPEFVT 502
Query: 124 KNKNQNEAPGEDCEDPDGEYLEISEQGMDTSYLSIGDCKHKNVEMGKTTGISTNNGHEAE 177
+N+ NEAP EDCED DGEYLEISEQGMD LSIGDCKHKN EMG+TT +STNN HE E
Sbjct: 503 ENR--NEAPVEDCEDSDGEYLEISEQGMDILNLSIGDCKHKNEEMGETTELSTNNEHEVE 562
BLAST of CmaCh14G017580 vs. ExPASy TrEMBL
Match:
A0A5D3D317 (Serine-aspartate repeat-containing protein F isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00870 PE=4 SV=1)
HSP 1 Score: 181.4 bits (459), Expect = 3.3e-42
Identity = 111/211 (52.61%), Postives = 128/211 (60.66%), Query Frame = 0
Query: 4 RKNGDLIEPRPCHEYTMPDAKKVDTKDKEPATELIRHNSS------CLPTE---ESMQVP 63
+K GDL+EPR CH YT P AK VDTKDK T++I HN+S CL E S+QVP
Sbjct: 425 KKKGDLVEPRQCHGYTAPAAKNVDTKDKGTVTDVICHNTSGSLAEECLVIESPNSSVQVP 484
Query: 64 E----------------------NL-------NAIQVEFNTIGSHSRNNAEEIEISPGFV 123
E N+ N +Q EFNT SHS NAEE E+SP FV
Sbjct: 485 EVEDKVEFQLREERLGTETVDEDNIPTQSKISNEVQEEFNTTESHSEKNAEEAEVSPEFV 544
Query: 124 AKNKNQNEAPGEDCEDPDGEYLEISEQGMDTSYLSIGDCKHKNVEMGKTTGISTNNGHEA 177
A+NK NEAP EDCED DGEYLEISEQGMD LSIGDCKHKN EMG+TT +STNN HEA
Sbjct: 545 AENK--NEAPVEDCEDSDGEYLEISEQGMDILNLSIGDCKHKNEEMGETTEVSTNNEHEA 604
BLAST of CmaCh14G017580 vs. ExPASy TrEMBL
Match:
A0A1S4DSH5 (serine-aspartate repeat-containing protein F isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483664 PE=4 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 5.6e-42
Identity = 111/211 (52.61%), Postives = 128/211 (60.66%), Query Frame = 0
Query: 4 RKNGDLIEPRPCHEYTMPDAKKVDTKDKEPATELIRHNSS------CLPTE---ESMQVP 63
+K GDL+EPR CH YT P AK VDTKDK T++I HN+S CL E S+QVP
Sbjct: 383 KKKGDLVEPRQCHGYTAPAAKNVDTKDKGTVTDVICHNTSGSLAEECLVIESPNSSVQVP 442
Query: 64 E----------------------NL-------NAIQVEFNTIGSHSRNNAEEIEISPGFV 123
E N+ N +Q EFNT SHS NAEE E+SP FV
Sbjct: 443 EVEDKVEFQLREERLGTETVDEDNIPTQSKISNEVQEEFNTTESHSEKNAEEAEVSPEFV 502
Query: 124 AKNKNQNEAPGEDCEDPDGEYLEISEQGMDTSYLSIGDCKHKNVEMGKTTGISTNNGHEA 177
A+NK NEAP EDCED DGEYLEISEQGMD LSIGDCKHKN EMG+TT +ST+N HEA
Sbjct: 503 AENK--NEAPVEDCEDSDGEYLEISEQGMDILNLSIGDCKHKNEEMGETTELSTSNEHEA 562
BLAST of CmaCh14G017580 vs. ExPASy TrEMBL
Match:
A0A1S3AXG5 (serine-aspartate repeat-containing protein F isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483664 PE=4 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 5.6e-42
Identity = 111/211 (52.61%), Postives = 128/211 (60.66%), Query Frame = 0
Query: 4 RKNGDLIEPRPCHEYTMPDAKKVDTKDKEPATELIRHNSS------CLPTE---ESMQVP 63
+K GDL+EPR CH YT P AK VDTKDK T++I HN+S CL E S+QVP
Sbjct: 358 KKKGDLVEPRQCHGYTAPAAKNVDTKDKGTVTDVICHNTSGSLAEECLVIESPNSSVQVP 417
Query: 64 E----------------------NL-------NAIQVEFNTIGSHSRNNAEEIEISPGFV 123
E N+ N +Q EFNT SHS NAEE E+SP FV
Sbjct: 418 EVEDKVEFQLREERLGTETVDEDNIPTQSKISNEVQEEFNTTESHSEKNAEEAEVSPEFV 477
Query: 124 AKNKNQNEAPGEDCEDPDGEYLEISEQGMDTSYLSIGDCKHKNVEMGKTTGISTNNGHEA 177
A+NK NEAP EDCED DGEYLEISEQGMD LSIGDCKHKN EMG+TT +ST+N HEA
Sbjct: 478 AENK--NEAPVEDCEDSDGEYLEISEQGMDILNLSIGDCKHKNEEMGETTELSTSNEHEA 537
BLAST of CmaCh14G017580 vs. ExPASy TrEMBL
Match:
A0A1S3AXG7 (serine-aspartate repeat-containing protein F isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483664 PE=4 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 5.6e-42
Identity = 111/211 (52.61%), Postives = 128/211 (60.66%), Query Frame = 0
Query: 4 RKNGDLIEPRPCHEYTMPDAKKVDTKDKEPATELIRHNSS------CLPTE---ESMQVP 63
+K GDL+EPR CH YT P AK VDTKDK T++I HN+S CL E S+QVP
Sbjct: 276 KKKGDLVEPRQCHGYTAPAAKNVDTKDKGTVTDVICHNTSGSLAEECLVIESPNSSVQVP 335
Query: 64 E----------------------NL-------NAIQVEFNTIGSHSRNNAEEIEISPGFV 123
E N+ N +Q EFNT SHS NAEE E+SP FV
Sbjct: 336 EVEDKVEFQLREERLGTETVDEDNIPTQSKISNEVQEEFNTTESHSEKNAEEAEVSPEFV 395
Query: 124 AKNKNQNEAPGEDCEDPDGEYLEISEQGMDTSYLSIGDCKHKNVEMGKTTGISTNNGHEA 177
A+NK NEAP EDCED DGEYLEISEQGMD LSIGDCKHKN EMG+TT +ST+N HEA
Sbjct: 396 AENK--NEAPVEDCEDSDGEYLEISEQGMDILNLSIGDCKHKNEEMGETTELSTSNEHEA 455
BLAST of CmaCh14G017580 vs. NCBI nr
Match:
KAG7018750.1 (hypothetical protein SDJN02_20623, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 231.1 bits (588), Expect = 7.5e-57
Identity = 121/156 (77.56%), Postives = 127/156 (81.41%), Query Frame = 0
Query: 20 MPDAKKVDTKDKEPATELIRHNSSCLPTEESMQ----------------VPENL------ 79
MPDAKKVDT+DKEPATELIRHNSSCLP EESMQ + +N+
Sbjct: 1 MPDAKKVDTQDKEPATELIRHNSSCLPPEESMQIHGFQLREEHLGTETVIEDNIATQFKI 60
Query: 80 -NAIQVEFNTIGSHSRNNAEEIEISPGFVAKNKNQNEAPGEDCEDPDGEYLEISEQGMDT 139
NAIQVEFNTIGSHSR NAEEIE+SPGFVAKNKNQNEAPGEDCEDPDGEYLEISEQGMDT
Sbjct: 61 SNAIQVEFNTIGSHSRKNAEEIEVSPGFVAKNKNQNEAPGEDCEDPDGEYLEISEQGMDT 120
Query: 140 SYLSIGDCKHKNVEMGKTTGISTNNGHEAERQEPDE 153
YLSIGDCKHKN E+GKTTGISTNN HEAERQEPDE
Sbjct: 121 LYLSIGDCKHKNEEIGKTTGISTNNEHEAERQEPDE 156
BLAST of CmaCh14G017580 vs. NCBI nr
Match:
XP_038881451.1 (uncharacterized protein LOC120072973 [Benincasa hispida])
HSP 1 Score: 192.2 bits (487), Expect = 3.8e-45
Identity = 114/217 (52.53%), Postives = 134/217 (61.75%), Query Frame = 0
Query: 4 RKNGDLIEPRPCHEYTMPDAKKVDTKDKEPATELIRHNSSCLPTEES---------MQVP 63
+K GDL+EPRPCH YT+P AK VDTKD+ A +LI HNSSC EES MQVP
Sbjct: 276 KKKGDLVEPRPCHGYTIPAAKNVDTKDEGTAIDLICHNSSCSLAEESLVIESPKSFMQVP 335
Query: 64 E---------------------------NL-------NAIQVEFNTIGSHSRNNAEEIEI 123
E N+ N +Q EFNTIGSHS N+AE+ E+
Sbjct: 336 EVEERCTVLKEEFQLREEHLGTETVVQDNIPTQSKISNGVQGEFNTIGSHSENSAEKTEV 395
Query: 124 SPGFVAKNKNQNEAPGEDCEDPDGEYLEISEQGMDTSYLSIGDCKHKNVEMGKTTGISTN 177
P FVAK+KN+ EAPGEDCED DGEYLEISEQG D S LSIGD KHK+ + G+TT +STN
Sbjct: 396 FPEFVAKSKNEKEAPGEDCEDSDGEYLEISEQGTDISNLSIGDYKHKHEDKGETTEVSTN 455
BLAST of CmaCh14G017580 vs. NCBI nr
Match:
XP_031738160.1 (uncharacterized protein LOC105434833 isoform X2 [Cucumis sativus])
HSP 1 Score: 186.0 bits (471), Expect = 2.7e-43
Identity = 109/210 (51.90%), Postives = 128/210 (60.95%), Query Frame = 0
Query: 4 RKNGDLIEPRPCHEYTMPDAKKVDTKDKEPATELIRHNSSCLPTEE---------SMQVP 63
+K GDL+EPR CH YT+P AK VDTKDK T+L HN+SC EE S+Q+P
Sbjct: 285 KKKGDLVEPRQCHGYTVPAAKNVDTKDKGTVTDLTCHNTSCSLAEECLVIESPNSSVQIP 344
Query: 64 E---------------------NL-------NAIQVEFNTIGSHSRNNAEEIEISPGFVA 123
E N+ N ++ EFNT SHS NNAEE E+SP FV
Sbjct: 345 EVENKEEFQLREHLGTETVDEDNIPTQSKISNEVEEEFNTTESHSENNAEEAEVSPEFVT 404
Query: 124 KNKNQNEAPGEDCEDPDGEYLEISEQGMDTSYLSIGDCKHKNVEMGKTTGISTNNGHEAE 177
+N+ NEAP EDCED DGEYLEISEQGMD LSIGDCKHKN EMG+TT +STNN HE E
Sbjct: 405 ENR--NEAPVEDCEDSDGEYLEISEQGMDILNLSIGDCKHKNEEMGETTELSTNNEHEVE 464
BLAST of CmaCh14G017580 vs. NCBI nr
Match:
XP_011650954.1 (myb-like protein X isoform X1 [Cucumis sativus] >XP_031738159.1 myb-like protein X isoform X1 [Cucumis sativus] >KGN56932.1 hypothetical protein Csa_010537 [Cucumis sativus])
HSP 1 Score: 186.0 bits (471), Expect = 2.7e-43
Identity = 109/210 (51.90%), Postives = 128/210 (60.95%), Query Frame = 0
Query: 4 RKNGDLIEPRPCHEYTMPDAKKVDTKDKEPATELIRHNSSCLPTEE---------SMQVP 63
+K GDL+EPR CH YT+P AK VDTKDK T+L HN+SC EE S+Q+P
Sbjct: 383 KKKGDLVEPRQCHGYTVPAAKNVDTKDKGTVTDLTCHNTSCSLAEECLVIESPNSSVQIP 442
Query: 64 E---------------------NL-------NAIQVEFNTIGSHSRNNAEEIEISPGFVA 123
E N+ N ++ EFNT SHS NNAEE E+SP FV
Sbjct: 443 EVENKEEFQLREHLGTETVDEDNIPTQSKISNEVEEEFNTTESHSENNAEEAEVSPEFVT 502
Query: 124 KNKNQNEAPGEDCEDPDGEYLEISEQGMDTSYLSIGDCKHKNVEMGKTTGISTNNGHEAE 177
+N+ NEAP EDCED DGEYLEISEQGMD LSIGDCKHKN EMG+TT +STNN HE E
Sbjct: 503 ENR--NEAPVEDCEDSDGEYLEISEQGMDILNLSIGDCKHKNEEMGETTELSTNNEHEVE 562
BLAST of CmaCh14G017580 vs. NCBI nr
Match:
KAG6582338.1 (ATP sulfurylase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 182.6 bits (462), Expect = 3.0e-42
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 0
Query: 58 NAIQVEFNTIGSHSRNNAEEIEISPGFVAKNKNQNEAPGEDCEDPDGEYLEISEQGMDTS 117
NAIQVEFNTIGSHSR NAEEIE+SPGFVAKNKNQNEAPGEDCEDPDGEYLEISEQGMDT
Sbjct: 645 NAIQVEFNTIGSHSRKNAEEIEVSPGFVAKNKNQNEAPGEDCEDPDGEYLEISEQGMDTL 704
Query: 118 YLSIGDCKHKNVEMGKTTGISTNNGHEAERQEPDE 153
YLSIGDCKHKN E+GKTTGISTNN HEAERQEPDE
Sbjct: 705 YLSIGDCKHKNEEIGKTTGISTNNEHEAERQEPDE 739
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L8I8 | 1.3e-43 | 51.90 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G144220 PE=4 SV=1 | [more] |
A0A5D3D317 | 3.3e-42 | 52.61 | Serine-aspartate repeat-containing protein F isoform X1 OS=Cucumis melo var. mak... | [more] |
A0A1S4DSH5 | 5.6e-42 | 52.61 | serine-aspartate repeat-containing protein F isoform X1 OS=Cucumis melo OX=3656 ... | [more] |
A0A1S3AXG5 | 5.6e-42 | 52.61 | serine-aspartate repeat-containing protein F isoform X2 OS=Cucumis melo OX=3656 ... | [more] |
A0A1S3AXG7 | 5.6e-42 | 52.61 | serine-aspartate repeat-containing protein F isoform X3 OS=Cucumis melo OX=3656 ... | [more] |
Match Name | E-value | Identity | Description | |
KAG7018750.1 | 7.5e-57 | 77.56 | hypothetical protein SDJN02_20623, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_038881451.1 | 3.8e-45 | 52.53 | uncharacterized protein LOC120072973 [Benincasa hispida] | [more] |
XP_031738160.1 | 2.7e-43 | 51.90 | uncharacterized protein LOC105434833 isoform X2 [Cucumis sativus] | [more] |
XP_011650954.1 | 2.7e-43 | 51.90 | myb-like protein X isoform X1 [Cucumis sativus] >XP_031738159.1 myb-like protein... | [more] |
KAG6582338.1 | 3.0e-42 | 93.68 | ATP sulfurylase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia... | [more] |
Match Name | E-value | Identity | Description | |