CmaCh14G017480 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCCGACCAAAAGTTCTAAACAGAAGAAAACCGAAAGGGTGAGAAAATGGAGAGGAGACCGAGAGAGCGGGGATTCGGATACCTGTTGACGGGTCTTCTTCTGGCGACCTTAATCGCCAGAATCGATTCGCTTTCGGTGACAGTGAACGAGGTTGAATGCATCCATGAATACGTATTGTACGAAGGCGACACCGTTTCTGGGAATTTTGTCGTCGTCGATCATGAAATTTTCTGGGGCGCCGATCATCCTGGCATTGATTTCACTGTAAGCCACATTGTTTCCATCATTAATCTGGTTTTTAATTCATGTTTGCATGACAATGCGTTTCGTTTCTGCCGATTTGTAGATTGATCCCGATTACGATTGGATCTCGGATTGGGGGAATGTGTGGTAGAGTTCGGTTTTTTATTTCCAATTTTTCTGGGCAGTCTTCTTTTCTCTGTTGTGAAATTTGTTTAGGAAAATGTTGTTCGTTGATTTTGACTTATTAAAGAACCTGGATTTTTTTGCCCTTTTGTTAATATGGACGTATGGGCTTGTTTGTTTGTAATCGTGATGATACTTTAGATTGATAATTGTAGTACATTTCTTGTGAGCTTCGAAATGATCTGTTGTTAAACTGTTTATGATCATGAGTTTCACATTTATAATCCTTCGGGCATCCACCTGACACCCATTGACTGTTTTATTTTGCTCGCTTACCAAATGGTGTTGTGAAATTGTTATTTTCTTTGTTCTCACAATTTGATGGGTAATTGGCCGTGCATTTTCCTTTTTTCTTTAATAACTTAGACGAGTCATGTGTTTCACCTCAATTCCTCAGGTCTCTAAAGCGGTGGTAGAAAAAATGTTTAGAAAAGTAGATGAATATGCATGTTTCTTCTTCTTCTTATAACCCATCTGAATCCATAAATGTTATTTCTTTGGTCATCATCGGCTGGATATTAGGGTACCTGGAATCTCTTGAAGGATTTTTGTATCCATAATGAAATGTTGTTTTGAAGATATCCTAACGTGGGTTGGTTTTGTGCAGGTTACATCTCCCGCAGGTAATGTGGTGCACTCGTTGAAGGAGACATCTGGTGGCAAGTTTGAGTTTAAGGCTTCTCGCAGTGGAATGTTTAGATTCTGTTTTCGTAATCCCTACTCGACCACCGAGACAGTTTCTTTCTACATCCATGTTGGTCACATTCCAAACGAACATGACCTTGCTAAAGATGGTATTAATTAACTTCTGCATAGATGCCTACACATTTGTGCTTTGAGGACTTGGTTGCTTTTATGAAGTTGACACTTCTCTCATTTTTCACCTCGTTGTGGTAATTTCTTGCAGAACACCTAGACCCTGTAAATGTTAAAATTGCAGAGCTTAGAGAGGCATTGGAATCGGTCACCGCCGAGCAGAAATATTTGAAAGCACGTGATGCACGCCACCGTCACAGTATGTGGTTTATTTTTGGCATGGTTTATATATATATATAGAAGAAACATATAAATTAATCATAAACGAAGAAATACAGCTTAGGTGCAGGGGGAAGAGAGAACCCCCTCCCAAAGGAATTGGTCGTAGGCATGACACCACCAAGATGTAGGGTCTGTAAACTTATGGCATTTCTTTGAATTCTTGCTAGCGAACGCGATTTCTAACTCTGTGACACAAGATGAATGTCTTTTCTTCTCTAGTGGTCCGACATAACTATCATGATTATGATCTGATCTTGATGTCTATGTGTGAGATTGTAACACACACGATAGCTTAAGCATCATCTTTTAATAATGCATATAGGGATCAAGCGTTGAAACCACGAGCTGAACAATAATTAGCATAGTTTTGAATATTATCCACCAGCATTATATCTCATGAAACTTCGTAGAAACTAGTTTCTTTTTTGTTTCCAGTCTAATATCGATGTAGACAAGAAGTTTATTCCAACCCATCAATTTTTAAGTTGAAATCCAGACTGCTTTGGCAATTGTTCTAGGATTCTTATTGTCTTTGCTACCTTTGGTTGTTGTGAATGCAGCTAATGAGAGTACAAGAAAGCGTGTAATTTTCTACACAGTGGGAGAGTATTTGTTGCTCGCTGTTGCAAGCGGGCTTCAGGTCGTTTACATTCGTCGCCTCTTCAGCAAGTCGGTTGCATATAACCGGGTCTGAGCATCCATCCATCCATCCATCGATCCTAGTGGTAACATAACATCGTTGCCCCTTTCTTAGCTTTTAGGAAAACCTCAGGAATGAATTATATTAGTCTATCATTTGTTGTATAATCACTTTTGATTGTGCTTACAGTTCATAATTGTAAGCTGGGGGTTCACGTATTAGCATCTTCTTGAAGCTAGGGAAAGCCTATTTATTTACCCTATTATGCTTCAAAAAGGATGTATGTGGGCTCCAAATACCCTTCCTCATTCTTTGCCTCCCTTTTTATCAAAAAGTTCAATTTTTTATATACGCTACAAACTACATCAATACACCACTGCTTACTGAATCAACACCATGTGACATGTGTTGAGGCCAAGTTGATTATAGTTTATTGGATTAGATACCAATTATCATGTGAACGTTGATGCTCGATTGTGAGGCTAATTTGATCATAGTTTAGTAGATTAGATACCA ATTTCCGACCAAAAGTTCTAAACAGAAGAAAACCGAAAGGGTGAGAAAATGGAGAGGAGACCGAGAGAGCGGGGATTCGGATACCTGTTGACGGGTCTTCTTCTGGCGACCTTAATCGCCAGAATCGATTCGCTTTCGGTGACAGTGAACGAGGTTGAATGCATCCATGAATACGTATTGTACGAAGGCGACACCGTTTCTGGGAATTTTGTCGTCGTCGATCATGAAATTTTCTGGGGCGCCGATCATCCTGGCATTGATTTCACTGTTACATCTCCCGCAGGTAATGTGGTGCACTCGTTGAAGGAGACATCTGGTGGCAAGTTTGAGTTTAAGGCTTCTCGCAGTGGAATGTTTAGATTCTGTTTTCGTAATCCCTACTCGACCACCGAGACAGTTTCTTTCTACATCCATGTTGGTCACATTCCAAACGAACATGACCTTGCTAAAGATGAACACCTAGACCCTGTAAATGTTAAAATTGCAGAGCTTAGAGAGGCATTGGAATCGGTCACCGCCGAGCAGAAATATTTGAAAGCACGTGATGCACGCCACCGTCACACTAATGAGAGTACAAGAAAGCGTGTAATTTTCTACACAGTGGGAGAGTATTTGTTGCTCGCTGTTGCAAGCGGGCTTCAGGTCGTTTACATTCGTCGCCTCTTCAGCAAGTCGGTTGCATATAACCGGGTCTGAGCATCCATCCATCCATCCATCGATCCTAGTGGTAACATAACATCGTTGCCCCTTTCTTAGCTTTTAGGAAAACCTCAGGAATGAATTATATTAGTCTATCATTTGTTGTATAATCACTTTTGATTGTGCTTACAGTTCATAATTGTAAGCTGGGGGTTCACGTATTAGCATCTTCTTGAAGCTAGGGAAAGCCTATTTATTTACCCTATTATGCTTCAAAAAGGATGTATGTGGGCTCCAAATACCCTTCCTCATTCTTTGCCTCCCTTTTTATCAAAAAGTTCAATTTTTTATATACGCTACAAACTACATCAATACACCACTGCTTACTGAATCAACACCATGTGACATGTGTTGAGGCCAAGTTGATTATAGTTTATTGGATTAGATACCAATTATCATGTGAACGTTGATGCTCGATTGTGAGGCTAATTTGATCATAGTTTAGTAGATTAGATACCA ATGGAGAGGAGACCGAGAGAGCGGGGATTCGGATACCTGTTGACGGGTCTTCTTCTGGCGACCTTAATCGCCAGAATCGATTCGCTTTCGGTGACAGTGAACGAGGTTGAATGCATCCATGAATACGTATTGTACGAAGGCGACACCGTTTCTGGGAATTTTGTCGTCGTCGATCATGAAATTTTCTGGGGCGCCGATCATCCTGGCATTGATTTCACTGTTACATCTCCCGCAGGTAATGTGGTGCACTCGTTGAAGGAGACATCTGGTGGCAAGTTTGAGTTTAAGGCTTCTCGCAGTGGAATGTTTAGATTCTGTTTTCGTAATCCCTACTCGACCACCGAGACAGTTTCTTTCTACATCCATGTTGGTCACATTCCAAACGAACATGACCTTGCTAAAGATGAACACCTAGACCCTGTAAATGTTAAAATTGCAGAGCTTAGAGAGGCATTGGAATCGGTCACCGCCGAGCAGAAATATTTGAAAGCACGTGATGCACGCCACCGTCACACTAATGAGAGTACAAGAAAGCGTGTAATTTTCTACACAGTGGGAGAGTATTTGTTGCTCGCTGTTGCAAGCGGGCTTCAGGTCGTTTACATTCGTCGCCTCTTCAGCAAGTCGGTTGCATATAACCGGGTCTGA MERRPRERGFGYLLTGLLLATLIARIDSLSVTVNEVECIHEYVLYEGDTVSGNFVVVDHEIFWGADHPGIDFTVTSPAGNVVHSLKETSGGKFEFKASRSGMFRFCFRNPYSTTETVSFYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV Homology
BLAST of CmaCh14G017480 vs. ExPASy Swiss-Prot
Match: Q9LIL4 (Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana OX=3702 GN=At3g22845 PE=2 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 3.9e-95 Identity = 173/215 (80.47%), Postives = 192/215 (89.30%), Query Frame = 0
BLAST of CmaCh14G017480 vs. ExPASy Swiss-Prot
Match: Q9S7M9 (Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana OX=3702 GN=At3g07680 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.8e-26 Identity = 63/183 (34.43%), Postives = 97/183 (53.01%), Query Frame = 0
BLAST of CmaCh14G017480 vs. ExPASy Swiss-Prot
Match: Q769F9 (Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=empA PE=3 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.7e-18 Identity = 64/181 (35.36%), Postives = 97/181 (53.59%), Query Frame = 0
BLAST of CmaCh14G017480 vs. ExPASy Swiss-Prot
Match: A7SXK3 (Transmembrane emp24 domain-containing protein OS=Nematostella vectensis OX=45351 GN=v1g194562 PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.7e-13 Identity = 49/180 (27.22%), Postives = 91/180 (50.56%), Query Frame = 0
BLAST of CmaCh14G017480 vs. ExPASy Swiss-Prot
Match: Q28735 (Transmembrane emp24 domain-containing protein 10 OS=Oryctolagus cuniculus OX=9986 GN=TMED10 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 3.7e-13 Identity = 53/183 (28.96%), Postives = 88/183 (48.09%), Query Frame = 0
BLAST of CmaCh14G017480 vs. ExPASy TrEMBL
Match: A0A6J1IXM6 (transmembrane emp24 domain-containing protein p24beta3-like OS=Cucurbita maxima OX=3661 GN=LOC111480098 PE=3 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 1.4e-116 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of CmaCh14G017480 vs. ExPASy TrEMBL
Match: A0A6J1GUU7 (transmembrane emp24 domain-containing protein p24beta3-like OS=Cucurbita moschata OX=3662 GN=LOC111457734 PE=3 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 5.1e-114 Identity = 210/215 (97.67%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of CmaCh14G017480 vs. ExPASy TrEMBL
Match: A0A6J1FH03 (transmembrane emp24 domain-containing protein p24beta3-like OS=Cucurbita moschata OX=3662 GN=LOC111445313 PE=3 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 8.7e-106 Identity = 194/215 (90.23%), Postives = 204/215 (94.88%), Query Frame = 0
BLAST of CmaCh14G017480 vs. ExPASy TrEMBL
Match: A0A6J1IDU7 (transmembrane emp24 domain-containing protein p24beta3-like OS=Cucurbita maxima OX=3661 GN=LOC111473076 PE=3 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 2.5e-105 Identity = 194/215 (90.23%), Postives = 204/215 (94.88%), Query Frame = 0
BLAST of CmaCh14G017480 vs. ExPASy TrEMBL
Match: A0A5A7U264 (Transmembrane emp24 domain-containing protein p24beta3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00810 PE=3 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 2.8e-104 Identity = 191/215 (88.84%), Postives = 204/215 (94.88%), Query Frame = 0
BLAST of CmaCh14G017480 vs. NCBI nr
Match: XP_022980825.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita maxima]) HSP 1 Score: 428.7 bits (1101), Expect = 2.9e-116 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of CmaCh14G017480 vs. NCBI nr
Match: KAG7018742.1 (Transmembrane emp24 domain-containing protein p24beta3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 420.6 bits (1080), Expect = 8.0e-114 Identity = 210/215 (97.67%), Postives = 213/215 (99.07%), Query Frame = 0
BLAST of CmaCh14G017480 vs. NCBI nr
Match: XP_022955882.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita moschata]) HSP 1 Score: 420.2 bits (1079), Expect = 1.0e-113 Identity = 210/215 (97.67%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of CmaCh14G017480 vs. NCBI nr
Match: XP_023527186.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 418.7 bits (1075), Expect = 3.0e-113 Identity = 209/215 (97.21%), Postives = 213/215 (99.07%), Query Frame = 0
BLAST of CmaCh14G017480 vs. NCBI nr
Match: XP_038897452.1 (transmembrane emp24 domain-containing protein p24beta3 [Benincasa hispida]) HSP 1 Score: 398.3 bits (1022), Expect = 4.3e-107 Identity = 195/215 (90.70%), Postives = 207/215 (96.28%), Query Frame = 0
BLAST of CmaCh14G017480 vs. TAIR 10
Match: AT3G22845.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 349.0 bits (894), Expect = 2.8e-96 Identity = 173/215 (80.47%), Postives = 192/215 (89.30%), Query Frame = 0
BLAST of CmaCh14G017480 vs. TAIR 10
Match: AT3G07680.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 119.8 bits (299), Expect = 2.7e-27 Identity = 63/183 (34.43%), Postives = 97/183 (53.01%), Query Frame = 0
BLAST of CmaCh14G017480 vs. TAIR 10
Match: AT1G57620.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 75.5 bits (184), Expect = 5.9e-14 Identity = 57/207 (27.54%), Postives = 102/207 (49.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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